Citrus Sinensis ID: 010713

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500---
Protein Sequence
MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGYTEWFLSKEDLKVDDVVRSRKPPNSFKPENMDVPEGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVRLKEEDRRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTCPGMVKKYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRKLRGAKAKKLQSSVIQKDGQHVDGQVAGNPAWLPPSMANMLSKGTSAAAGR
Secondary Structure (PSIPRED)
cccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccEEEccccccEEEEccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccccHHHHHcccccccEEEEccccccccccEEEEEEcccccEEEEEEccccccccccccccccccEEcEEEEEEcccccccccccccccccccEEccEEEEEcccEEEEEccccccccccccccccccccEEEEEEccccHHHHHHccccccccHHHHHHHHHHHHHHHHHcEEEcccccccHHcccccccccccccEEccccccccccccccHHccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccEEEEcccHHHEEEcccccEEEEccccccHcccccccccccccccccHHHccHHHHcccccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHccccccccHHHHHHccHHHHcccHHHHHHcccccccccccccccccccccHHcccccccccccccccccccccccccccccEEEcccccccccEEEEccccccccccccccEEEEHccccccccEEEEcccccccccEEEEEEEccccEEEEEEEEEcccccccHHHHHHHccHEccEEEEEcHcccccccccccccccccccccEEEEccccEEEEEcccccccccccccEcccHccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEEcccccccccccccccccccccccccccccccccccccHHHHHHcccccccccc
Coil and Loop (DISEMBL)
mkfyegsvgdrmaqlkggklsLSNVFRYAIDLAQGILQLHSKgilvlnlkpfnfilneadravlgdvgiphlllgiplpssdlprrlgtpnymapeqwqpevrgpisfetdswGFACSIIEMLtgvqprcgrsvDEIYDAVVRrqeippipsglppaveNVLLGCFeydlrsrplMTDILRVFKSsqnsvhsdggwtghgsrilpdksssgytewflskedlkvddvvrsrkppnsfkpenmdvpegrvvgvehntegeSFVLVRVHGIHDPLRVHVSALERVTFglaagdwvrlkeedrrhspvgilhsiqrdgsvaVGFLGLETLWKGHFSELQMAESYCVGQFVrlkanvvspqfewprkregvwatgricmvvpngclivrfpgrltfgeqcssfladpaeVEVVTFntcpgmvkkyqHLEDLHWAVRPLFIALGLFTAMQMGFSVGRKLRGAKAKKLQSSviqkdgqhvdgqvagnpawlppsmanmlskgtsaaagr
Flexible Loop (DISEMBL)
mkfyegsvgdrmaqlKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLtgvqprcgRSVDEIYDAVVRRQEIppipsglppavENVLLGCFEYDLRSRPLMTDILRVFKSsqnsvhsdggwtghgsrilpDKSSSGYTEWFlskedlkvddvvrsrkppnsfkpenmdvpeGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVRLKEEDRRHSPVGilhsiqrdgsVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKAnvvspqfewprkregvwatgriCMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTCPGMVKKYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRKLRGAKAKKLQSSVIQKDGQHVDGQVAGNPAWLPPSMANMLSKgtsaaagr
Low Complexity Region (SEG)
MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVgiphlllgiplpSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGYTEWFLSKEDLKVDDVVRSRKPPNSFKPENMDVPEGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVRLKEEDRRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTCPGMVKKYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRKLRGAKAKKLQSSVIQKDGQHVDGQVAGNPAWLPPSMANMLSKGTSAAAGR
Disordered region (IsUnstruct)
****************GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS***********YMA*EQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK***************************YTEWFLSK******************************VGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVRLKEEDRRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTCPGMVKKYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRKL*************************************************
Disordered Region (DISOPRED)
MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI***SS**PRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS****************************************************************************************************GLAAGDWVR*************LHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTCPGMVKKYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGR*******************************WLPPSMANML**********
Disordered Region (DISEMBL)
********GDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGYTEWFLSKEDLKVDDVVRSRKPPNSFKPENMDVPEGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVRLKEEDRRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTCPGMVKKYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRK*******************HVDGQVAGNPAWLPPSMANML**********
Disordered Region (DISPRO)
**FYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGYTEWFLSKEDLKVDDVVRS*********ENMDVPEGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVRLKEEDRRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTCPGMVKKYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRK******************************WLPPSMANMLSK********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGYTEWFLSKEDLKVDDVVRSRKPPNSFKPENMDVPEGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVRLKEEDRRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTCPGMVKKYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRKLRGAKAKKLQSSVIQKDGQHVDGQVAGNPAWLPPSMANMLSKGTSAAAGR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	503	2.2.26 [Sep-21-2011]
Q9FY48	1625	E3 ubiquitin-protein liga	no	no	0.349	0.108	0.313	1e-22
Q2MHE4	390	Serine/threonine-protein	no	no	0.347	0.448	0.274	5e-14
Q54XJ4	1495	Probable serine/threonine	yes	no	0.326	0.109	0.323	2e-12
Q5PU49	674	Protein kinase C delta ty	yes	no	0.403	0.301	0.266	5e-11
Q55GU0	916	Probable serine/threonine	no	no	0.339	0.186	0.268	8e-11
P28867	674	Protein kinase C delta ty	yes	no	0.339	0.253	0.298	1e-10
P51957	841	Serine/threonine-protein	yes	no	0.341	0.204	0.271	1e-10
Q05655	676	Protein kinase C delta ty	no	no	0.341	0.254	0.284	3e-10
P09215	673	Protein kinase C delta ty	yes	no	0.339	0.254	0.293	4e-10
P83099	671	Putative protein kinase C	yes	no	0.324	0.242	0.287	4e-10

>sp|Q9FY48|KEG_ARATH E3 ubiquitin-protein ligase KEG OS=Arabidopsis thaliana GN=KEG PE=1 SV=2

 Score =  108 bits (269), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 25/201 (12%)

Query: 6   GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
           GSV   M Q   G+L+L  + RY  D+A+G+ +LH+ G++ +N+KP N +L+ +  AV+ 
Sbjct: 228 GSVQSEM-QRNEGRLTLEQILRYGADVARGVAELHAAGVICMNIKPSNLLLDASGNAVVS 286

Query: 66  DVGIPHLLLGIPLPSSDLPRRLG------------TPNYMAPEQWQP------EVRGPIS 107
           D G+  +L   P      P                +P+Y APE W P      E    +S
Sbjct: 287 DYGLAPILKK-PTCQKTRPEFDSSKVTLYTDCVTLSPHYTAPEAWGPVKKLFWEDASGVS 345

Query: 108 FETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-----IPSGLPPAVENVL 162
            E+D+W F C+++EM TG  P  G S +EI+ AVV+ +++PP     +  G+P  +  ++
Sbjct: 346 PESDAWSFGCTLVEMCTGSTPWDGLSREEIFQAVVKARKVPPQYERIVGVGIPRELWKMI 405

Query: 163 LGCFEYDLRSRPLMTDILRVF 183
             C ++    RP    +L  F
Sbjct: 406 GECLQFKPSKRPTFNAMLATF 426

Mediates E2-dependent protein ubiquitination. Acts as a negative regulator of abscisic acid signaling. Required for ABI5 degradation.
Arabidopsis thaliana (taxid: 3702)
EC: 6EC: .EC: 3EC: .EC: 2EC: .EC: -

>sp|Q2MHE4|HT1_ARATH Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1

 Score = 79.7 bits (195), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 7/182 (3%)

Query: 20  LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP 79
           LS+  V R A+D+++G+  LHS+G++  +LK  N +LN+  R  + D G   L       
Sbjct: 184 LSIETVLRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCL----ETQ 239

Query: 80  SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYD 139
             +    +GT  +MAPE  +     P + + D + F   + E+ T + P  G +  +   
Sbjct: 240 CREAKGNMGTYRWMAPEMIK---EKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAF 296

Query: 140 AVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGH 199
           AV  + E PP+P+   PA+ +++  C+  +   RP  ++I+ V +     V      T H
Sbjct: 297 AVAEKNERPPLPASCQPALAHLIKRCWSENPSKRPDFSNIVAVLEKYDECVKEGLPLTSH 356

Query: 200 GS 201
            S
Sbjct: 357 AS 358

Serine/threonine kinase involved in the control of stomatal movement in response to CO(2). Shows a reduced response to ABA or light compared to CO(2).

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q54XJ4|Y8901_DICDI Probable serine/threonine-protein kinase DDB_G0278901 OS=Dictyostelium discoideum GN=DDB_G0278901 PE=3 SV=1

 Score = 74.7 bits (182), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 91/176 (51%), Gaps = 12/176 (6%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           M+F E    +++ + + G L  S V  Y   +  G+  LH +G++  ++K  N +++   
Sbjct: 101 MEFIENGSLEKIIK-RHGLLPESLVTVYIAQVLNGLEYLHRQGVIHRDIKAANLLISTDG 159

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRL--GTPNYMAPEQWQPEVRGPISFETDSWGFACS 118
              L D G+   +  +   SSD P     GTP +MAPE  Q  ++G IS   D W   C+
Sbjct: 160 SIKLADFGVATKVSDL---SSDNPDDTFAGTPYWMAPEVIQ--MQG-ISTACDVWSLGCT 213

Query: 119 IIEMLTGVQPRCGRS-VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
           IIE+LTG  P  G +    +Y  V  +++ PPIP G+  A+++ LL CF+ D   R
Sbjct: 214 IIELLTGTPPYFGLAPAAALYKIV--QEDHPPIPPGISAALKDFLLNCFKKDENIR 267

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q5PU49|KPCD_CANFA Protein kinase C delta type OS=Canis familiaris GN=PRKCD PE=2 SV=1

 Score = 69.7 bits (169), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 30/233 (12%)

Query: 1   MKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M+F  G  GD M  ++  G+  L     YA ++  G+  LH+KGI+  +LK  N +L++ 
Sbjct: 425 MEFLNG--GDLMYHIQDKGRFELYRATFYAAEIVCGLQFLHNKGIIYRDLKLDNVMLDQD 482

Query: 60  DRAVLGDVGI-PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACS 118
               + D G+    + G    S+      GTP+Y+APE  Q       SF  D W F   
Sbjct: 483 GHIKIADFGMCKENIFGEKQAST----FCGTPDYIAPEILQGL---KYSFSVDWWSFGVL 535

Query: 119 IIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTD 178
           + EML G  P  G   DE+++++  R + P  P  +    +++L    E D   R  +T 
Sbjct: 536 LYEMLIGQSPFHGDDEDELFESI--RVDTPHYPRWITKESKDILEKLLERDTTKRLGVTG 593

Query: 179 ILRV---FKS--------------SQNSVHSDGGWTGHGSRILPDKSSSGYTE 214
            +++   FK+               +  V S G ++      L +K+   YT+
Sbjct: 594 NIKIHPFFKTINWTLLEKRAVEPPFKPKVKSPGDYSNFDQEFLNEKARLSYTD 646

Calcium-independent, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that plays contrasting roles in cell death and cell survival by functioning as a pro-apoptotic protein during DNA damage-induced apoptosis, but acting as an anti-apoptotic protein during cytokine receptor-initiated cell death, is involved in tumor suppression, is required for oxygen radical production by NADPH oxidase and acts as positive or negative regulator in platelet functional responses. Upon DNA damage, activates the promoter of the death-promoting transcription factor BCLAF1/Btf to trigger BCLAF1-mediated p53/TP53 gene transcription and apoptosis. In response to oxidative stress, interact with and activate CHUK/IKKA in the nucleus, causing the phosphorylation of p53/TP53. In the case of ER stress or DNA damage-induced apoptosis, can form a complex with the tyrosine-protein kinase ABL1 which trigger apoptosis independently of p53/TP53. In cytosol can trigger apoptosis by activating MAPK11 or MAPK14, inhibiting AKT1 and decreasing the level of X-linked inhibitor of apoptosis protein (XIAP), whereas in nucleus induces apoptosis via the activation of MAPK8 or MAPK9. Upon ionizing radiation treatment, is required for the activation of the apoptosis regulators BAX and BAK, which trigger the mitochondrial cell death pathway. Can phosphorylate MCL1 and target it for degradation which is sufficient to trigger for BAX activation and apoptosis. Is required for the control of cell cycle progression both at G1/S and G2/M phases. Mediates phorbol 12-myristate 13-acetate (PMA)-induced inhibition of cell cycle progression at G1/S phase by up-regulating the CDK inhibitor CDKN1A/p21 and inhibiting the cyclin CCNA2 promoter activity. In response to UV irradiation can phosphorylate CDK1, which is important for the G2/M DNA damage checkpoint activation. Can protect glioma cells from the apoptosis induced by TNFSF10/TRAIL, probably by inducing increased phosphorylation and subsequent activation of AKT1. Can also act as tumor suppressor upon mitogenic stimulation with PMA or TPA. In N-formyl-methionyl-leucyl-phenylalanine (fMLP)-treated cells, is required for NCF1 (p47-phox) phosphorylation and activation of NADPH oxidase activity, and regulates TNF-elicited superoxide anion production in neutrophils, by direct phosphorylation and activation of NCF1 or indirectly through MAPK1/3 (ERK1/2) signaling pathways. May also play a role in the regulation of NADPH oxidase activity in eosinophil after stimulation with IL5, leukotriene B4 or PMA. In collagen-induced platelet aggregation, acts a negative regulator of filopodia formation and actin polymerization by interacting with and negatively regulating VASP phosphorylation. Downstream of PAR1, PAR4 and CD36/GP4 receptors, regulates differentially platelet dense granule secretion; acts as a positive regulator in PAR-mediated granule secretion, whereas it negatively regulates CD36/GP4-mediated granule release. Phosphorylates MUC1 in the C-terminal and regulates the interaction between MUC1 and beta-catenin.

Canis familiaris (taxid: 9615)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|Q55GU0|Y9955_DICDI Probable serine/threonine-protein kinase DDB_G0267514 OS=Dictyostelium discoideum GN=DDB_G0267514 PE=3 SV=1

 Score = 68.9 bits (167), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 88/179 (49%), Gaps = 8/179 (4%)

Query: 6   GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
           GS+ D +   K  K+++    + AI +AQG+  LH  G++  ++K  N +L+E     + 
Sbjct: 743 GSLYDALHS-KKIKMNMQLYKKLAIQIAQGMNYLHLSGVIHRDIKSLNLLLDEHMNVKIC 801

Query: 66  DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
           D G+  L       S+++ + +G+P +M+PE    E     + + D + F   + E+ TG
Sbjct: 802 DFGLSKL----KSKSTEMTKSIGSPIWMSPELLMGE---DYTEKVDVYAFGIILWELGTG 854

Query: 126 VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
             P  G    ++  AV  +   PPIP+  P  + +++  C+  D   RP  T+IL +  
Sbjct: 855 ELPYSGLDSVQLALAVTTKSLRPPIPNAWPYQLSHLIQACWHQDPLKRPSFTEILNLLN 913

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P28867|KPCD_MOUSE Protein kinase C delta type OS=Mus musculus GN=Prkcd PE=1 SV=3

 Score = 68.6 bits (166), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 13/184 (7%)

Query: 1   MKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M+F  G  GD M  ++  G+  L     YA ++  G+  LHSKGI+  +LK  N +L+  
Sbjct: 425 MEFLNG--GDLMFHIQDKGRFELYRATFYAAEIICGLQFLHSKGIIYRDLKLDNVMLDRD 482

Query: 60  DRAVLGDVGI-PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACS 118
               + D G+    + G    S+      GTP+Y+APE  Q       SF  D W F   
Sbjct: 483 GHIKIADFGMCKENIFGEGRAST----FCGTPDYIAPEILQG---LKYSFSVDWWSFGVL 535

Query: 119 IIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTD 178
           + EML G  P  G   DE+++++  R + P  P  +    ++++   FE D   R  +T 
Sbjct: 536 LYEMLIGQSPFHGDDEDELFESI--RVDTPHYPRWITKESKDIMEKLFERDPDKRLGVTG 593

Query: 179 ILRV 182
            +R+
Sbjct: 594 NIRI 597

Calcium-independent, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that plays contrasting roles in cell death and cell survival by functioning as a pro-apoptotic protein during DNA damage-induced apoptosis, but acting as an anti-apoptotic protein during cytokine receptor-initiated cell death, is involved in tumor suppression, is required for oxygen radical production by NADPH oxidase and acts as positive or negative regulator in platelet functional responses. Upon DNA damage, activates the promoter of the death-promoting transcription factor BCLAF1/Btf to trigger BCLAF1-mediated p53/TP53 gene transcription and apoptosis. In response to oxidative stress, interact with and activate CHUK/IKKA in the nucleus, causing the phosphorylation of p53/TP53. In the case of ER stress or DNA damage-induced apoptosis, can form a complex with the tyrosine-protein kinase ABL1 which trigger apoptosis independently of p53/TP53. In cytosol can trigger apoptosis by activating MAPK11 or MAPK14, inhibiting AKT1 and decreasing the level of X-linked inhibitor of apoptosis protein (XIAP), whereas in nucleus induces apoptosis via the activation of MAPK8 or MAPK9. Upon ionizing radiation treatment, is required for the activation of the apoptosis regulators BAX and BAK, which trigger the mitochondrial cell death pathway. Can phosphorylate MCL1 and target it for degradation which is sufficient to trigger for BAX activation and apoptosis. Is required for the control of cell cycle progression both at G1/S and G2/M phases. Mediates phorbol 12-myristate 13-acetate (PMA)-induced inhibition of cell cycle progression at G1/S phase by up-regulating the CDK inhibitor CDKN1A/p21 and inhibiting the cyclin CCNA2 promoter activity. In response to UV irradiation can phosphorylate CDK1, which is important for the G2/M DNA damage checkpoint activation. Can protect glioma cells from the apoptosis induced by TNFSF10/TRAIL, probably by inducing increased phosphorylation and subsequent activation of AKT1. Can also act as tumor suppressor upon mitogenic stimulation with PMA or TPA. In N-formyl-methionyl-leucyl-phenylalanine (fMLP)-treated cells, is required for NCF1 (p47-phox) phosphorylation and activation of NADPH oxidase activity, and regulates TNF-elicited superoxide anion production in neutrophils, by direct phosphorylation and activation of NCF1 or indirectly through MAPK1/3 (ERK1/2) signaling pathways. May also play a role in the regulation of NADPH oxidase activity in eosinophil after stimulation with IL5, leukotriene B4 or PMA. In collagen-induced platelet aggregation, acts a negative regulator of filopodia formation and actin polymerization by interacting with and negatively regulating VASP phosphorylation. Downstream of PAR1, PAR4 and CD36/GP4 receptors, regulates differentially platelet dense granule secretion; acts as a positive regulator in PAR-mediated granule secretion, whereas it negatively regulates CD36/GP4-mediated granule release. Phosphorylates MUC1 in the C-terminal and regulates the interaction between MUC1 and beta-catenin.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P51957|NEK4_HUMAN Serine/threonine-protein kinase Nek4 OS=Homo sapiens GN=NEK4 PE=1 SV=2

 Score = 68.2 bits (165), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 12/184 (6%)

Query: 1   MKFYEGSVGD---RMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN 57
           M F EG  GD   ++ + KG  L  + V  + + +A  +  LH K IL  +LK  N  L 
Sbjct: 83  MGFCEG--GDLYRKLKEQKGQLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLT 140

Query: 58  EADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFAC 117
             +   +GD+GI  +L      +S L   +GTP YM+PE +      P ++++D W   C
Sbjct: 141 RTNIIKVGDLGIARVLENHCDMASTL---IGTPYYMSPELFS---NKPYNYKSDVWALGC 194

Query: 118 SIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMT 177
            + EM T       + ++ +   ++  + +PP+P    P +  ++          RP + 
Sbjct: 195 CVYEMATLKHAFNAKDMNSLVYRIIEGK-LPPMPRDYSPELAELIRTMLSKRPEERPSVR 253

Query: 178 DILR 181
            ILR
Sbjct: 254 SILR 257

Seems to act exclusively upon threonine residues.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q05655|KPCD_HUMAN Protein kinase C delta type OS=Homo sapiens GN=PRKCD PE=1 SV=2

 Score = 67.4 bits (163), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 11/183 (6%)

Query: 1   MKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M+F  G  GD M  ++  G+  L     YA ++  G+  LHSKGI+  +LK  N +L+  
Sbjct: 427 MEFLNG--GDLMYHIQDKGRFELYRATFYAAEIMCGLQFLHSKGIIYRDLKLDNVLLDRD 484

Query: 60  DRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
               + D G+    +      S      GTP+Y+APE  Q       +F  D W F   +
Sbjct: 485 GHIKIADFGMCKENI---FGESRASTFCGTPDYIAPEILQGL---KYTFSVDWWSFGVLL 538

Query: 120 IEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
            EML G  P  G   DE+++++  R + P  P  +    +++L   FE +   R  +T  
Sbjct: 539 YEMLIGQSPFHGDDEDELFESI--RVDTPHYPRWITKESKDILEKLFEREPTKRLGVTGN 596

Query: 180 LRV 182
           +++
Sbjct: 597 IKI 599

Calcium-independent, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that plays contrasting roles in cell death and cell survival by functioning as a pro-apoptotic protein during DNA damage-induced apoptosis, but acting as an anti-apoptotic protein during cytokine receptor-initiated cell death, is involved in tumor suppression as well as survival of several cancers, is required for oxygen radical production by NADPH oxidase and acts as positive or negative regulator in platelet functional responses. Upon DNA damage, activates the promoter of the death-promoting transcription factor BCLAF1/Btf to trigger BCLAF1-mediated p53/TP53 gene transcription and apoptosis. In response to oxidative stress, interact with and activate CHUK/IKKA in the nucleus, causing the phosphorylation of p53/TP53. In the case of ER stress or DNA damage-induced apoptosis, can form a complex with the tyrosine-protein kinase ABL1 which trigger apoptosis independently of p53/TP53. In cytosol can trigger apoptosis by activating MAPK11 or MAPK14, inhibiting AKT1 and decreasing the level of X-linked inhibitor of apoptosis protein (XIAP), whereas in nucleus induces apoptosis via the activation of MAPK8 or MAPK9. Upon ionizing radiation treatment, is required for the activation of the apoptosis regulators BAX and BAK, which trigger the mitochondrial cell death pathway. Can phosphorylate MCL1 and target it for degradation which is sufficient to trigger for BAX activation and apoptosis. Is required for the control of cell cycle progression both at G1/S and G2/M phases. Mediates phorbol 12-myristate 13-acetate (PMA)-induced inhibition of cell cycle progression at G1/S phase by up-regulating the CDK inhibitor CDKN1A/p21 and inhibiting the cyclin CCNA2 promoter activity. In response to UV irradiation can phosphorylate CDK1, which is important for the G2/M DNA damage checkpoint activation. Can protect glioma cells from the apoptosis induced by TNFSF10/TRAIL, probably by inducing increased phosphorylation and subsequent activation of AKT1. Is highly expressed in a number of cancer cells and promotes cell survival and resistance against chemotherapeutic drugs by inducing cyclin D1 (CCND1) and hyperphosphorylation of RB1, and via several pro-survival pathways, including NF-kappa-B, AKT1 and MAPK1/3 (ERK1/2). Can also act as tumor suppressor upon mitogenic stimulation with PMA or TPA. In N-formyl-methionyl-leucyl-phenylalanine (fMLP)-treated cells, is required for NCF1 (p47-phox) phosphorylation and activation of NADPH oxidase activity, and regulates TNF-elicited superoxide anion production in neutrophils, by direct phosphorylation and activation of NCF1 or indirectly through MAPK1/3 (ERK1/2) signaling pathways. May also play a role in the regulation of NADPH oxidase activity in eosinophil after stimulation with IL5, leukotriene B4 or PMA. In collagen-induced platelet aggregation, acts a negative regulator of filopodia formation and actin polymerization by interacting with and negatively regulating VASP phosphorylation. Downstream of PAR1, PAR4 and CD36/GP4 receptors, regulates differentially platelet dense granule secretion; acts as a positive regulator in PAR-mediated granule secretion, whereas it negatively regulates CD36/GP4-mediated granule release. Phosphorylates MUC1 in the C-terminal and regulates the interaction between MUC1 and beta-catenin.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P09215|KPCD_RAT Protein kinase C delta type OS=Rattus norvegicus GN=Prkcd PE=1 SV=1

 Score = 66.6 bits (161), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 13/184 (7%)

Query: 1   MKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M+F  G  GD M  ++  G+  L     YA ++  G+  LH KGI+  +LK  N +L++ 
Sbjct: 425 MEFLNG--GDLMFHIQDKGRFELYRATFYAAEIICGLQFLHGKGIIYRDLKLDNVMLDKD 482

Query: 60  DRAVLGDVGI-PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACS 118
               + D G+    + G    S+      GTP+Y+APE  Q       SF  D W F   
Sbjct: 483 GHIKIADFGMCKENIFGENRAST----FCGTPDYIAPEILQGL---KYSFSVDWWSFGVL 535

Query: 119 IIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTD 178
           + EML G  P  G   DE+++++  R + P  P  +    ++++   FE D   R  +T 
Sbjct: 536 LYEMLIGQSPFHGDDEDELFESI--RVDTPHYPRWITKESKDIMEKLFERDPAKRLGVTG 593

Query: 179 ILRV 182
            +R+
Sbjct: 594 NIRL 597

Truncated isoform 2 is inactive.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|P83099|KPC4_DROME Putative protein kinase C delta type homolog OS=Drosophila melanogaster GN=Pkcdelta PE=2 SV=3

 Score = 66.6 bits (161), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 11/174 (6%)

Query: 1   MKFYEGSVGDRMAQLK-GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M++  G  GD M  ++  G+ S      Y  ++  G+  LH KGI+  +LK  N +L+  
Sbjct: 421 MEYLNG--GDLMFHIQESGRFSEERARFYGAEIISGLKFLHKKGIIYRDLKLDNVLLDYE 478

Query: 60  DRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
               + D G+  L + +   +       GTP+YMAPE  + E     +   D W F   +
Sbjct: 479 GHVRIADFGMCKLQIYLDKTADSF---CGTPDYMAPEIIKGE---KYNQNVDWWSFGVLL 532

Query: 120 IEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
            EML G  P  G   DE++ ++    EIP  P  +      +L G  E D   R
Sbjct: 533 YEMLIGQSPFSGCDEDELFWSIC--NEIPWFPVYISAEATGILKGLLEKDYTKR 584

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	503
224141907	562	predicted protein [Populus trichocarpa]	0.952	0.852	0.735	0.0
296082051	750	unnamed protein product [Vitis vinifera]	0.974	0.653	0.709	0.0
225430314	638	PREDICTED: uncharacterized protein LOC10	0.974	0.768	0.709	0.0
255548886	632	protein kinase, putative [Ricinus commun	1.0	0.795	0.693	0.0
224089274	583	predicted protein [Populus trichocarpa]	0.902	0.778	0.771	0.0
225442924	630	PREDICTED: uncharacterized protein LOC10	0.998	0.796	0.669	0.0
449437150	626	PREDICTED: uncharacterized protein LOC10	0.972	0.781	0.661	0.0
255553227	658	protein kinase, putative [Ricinus commun	0.992	0.758	0.650	0.0
297743474	946	unnamed protein product [Vitis vinifera]	0.904	0.480	0.697	0.0
297798736	612	kinase family protein [Arabidopsis lyrat	0.962	0.790	0.674	0.0

>gi|224141907|ref|XP_002324302.1| predicted protein [Populus trichocarpa] gi|222865736|gb|EEF02867.1| predicted protein [Populus trichocarpa]

 Score =  746 bits (1925), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/480 (73%), Positives = 417/480 (86%), Gaps = 1/480 (0%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           MKFYEGS+GD+MA LKGGKL+L +V RY I+LAQGI +LH+K ILVLNLKP +F+LNE D
Sbjct: 83  MKFYEGSIGDKMALLKGGKLTLPDVLRYGIELAQGIAELHAKEILVLNLKPCSFLLNEND 142

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
           +AVLGD+GIP+LL GIPL SSD+P RLGTPNYMAPEQWQPE+RGPIS ETDSWGF CSI+
Sbjct: 143 QAVLGDIGIPYLLFGIPLTSSDMPWRLGTPNYMAPEQWQPEIRGPISSETDSWGFGCSIV 202

Query: 121 EMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
           EMLTGV P CG+S++EIYD+VVR+QE P IP GLPP VEN+LLGCFEYDLRSRPLMTDIL
Sbjct: 203 EMLTGVLPWCGKSIEEIYDSVVRKQEKPHIPEGLPPPVENILLGCFEYDLRSRPLMTDIL 262

Query: 181 RVFKSSQNSVHSDGGWTGHGSRILPDKSS-SGYTEWFLSKEDLKVDDVVRSRKPPNSFKP 239
           RVFKSSQN+V  DGGWTG GSR + +KSS +GYTEWFLSK+ L+V D+VRSR+PPNS KP
Sbjct: 263 RVFKSSQNAVFVDGGWTGFGSRTILEKSSGAGYTEWFLSKDHLQVGDMVRSRRPPNSCKP 322

Query: 240 ENMDVPEGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVRLKEED 299
           ENMDVPEG VVG+E N + + FVLV VHGIHDPLR+ VS LE+V+FGLAAGDWV LKEE+
Sbjct: 323 ENMDVPEGTVVGLERNPDRDGFVLVSVHGIHDPLRLPVSTLEKVSFGLAAGDWVHLKEEN 382

Query: 300 RRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVVSPQFE 359
            +HSPVGILHSI RDGSVAVGF+G+ETLWKG +SELQMAESY VGQFVRLK NV+SP+FE
Sbjct: 383 NKHSPVGILHSINRDGSVAVGFIGVETLWKGKYSELQMAESYFVGQFVRLKTNVLSPRFE 442

Query: 360 WPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTCPGMVK 419
           WPRK  G WATG+I  ++PNGCLIV+FPGR T G++ SSFLADPAEVEVV+FNTCPG+VK
Sbjct: 443 WPRKTGGAWATGKIWWILPNGCLIVKFPGRFTIGQENSSFLADPAEVEVVSFNTCPGVVK 502

Query: 420 KYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRKLRGAKAKKLQSSVIQKDGQHVDGQVA 479
           KYQHLED HWAVRPL IALG+FTAM++GF  G+K+R ++  + + + +Q +GQ+ DGQ +
Sbjct: 503 KYQHLEDFHWAVRPLVIALGIFTAMKVGFFTGKKIRRSRVNRPRGNAVQSNGQYTDGQTS 562

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296082051|emb|CBI21056.3| unnamed protein product [Vitis vinifera]

 Score =  734 bits (1896), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/493 (70%), Positives = 415/493 (84%), Gaps = 3/493 (0%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           MKFYEGS+GD+MA LKGGKLSL ++ RY IDLAQ IL+LHSK ILVLNLKP+NF+L++ D
Sbjct: 239 MKFYEGSLGDKMAHLKGGKLSLRDILRYGIDLAQAILELHSKEILVLNLKPYNFLLDQND 298

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
            A+LGD+GIP+LLL IPLPSSD+ RRLGTPNYMAPEQWQPEVRGP+S ETDSWGF CSI+
Sbjct: 299 EAILGDLGIPYLLLQIPLPSSDIARRLGTPNYMAPEQWQPEVRGPLSLETDSWGFGCSIV 358

Query: 121 EMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
           EMLTGVQP CG+SV+E++D+VVR+QE P IPSGLPPAVE V++GCF YD RSRP M +IL
Sbjct: 359 EMLTGVQPWCGKSVEEVHDSVVRKQEKPFIPSGLPPAVERVIIGCFAYDFRSRPSMKNIL 418

Query: 181 RVFKSSQNSVHSDGGWTGHGSRILPDKS-SSGYTEWFLSKEDLKVDDVVRSRKPPNSFKP 239
             FKSS+N+V+SDGGWTG GSR + D    +GY+EWFLSKE+  V D+VRSRKPP+S KP
Sbjct: 419 EAFKSSENAVYSDGGWTGLGSRTITDNFIVNGYSEWFLSKENFLVGDLVRSRKPPHSCKP 478

Query: 240 ENMDVPEGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVRLKEED 299
           ENMDVP G VVG+E +++ + +VLVRV GIHDPLRVH   LERVT GLAAGDWVRL+ ED
Sbjct: 479 ENMDVPGGTVVGLERDSDQDGYVLVRVLGIHDPLRVHKYTLERVTSGLAAGDWVRLETED 538

Query: 300 RRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVVSPQFE 359
           RR+S VGILHSI RDGSV VGF+G+ETLWKG  + LQMAESYC GQFVRLKANV+SP+FE
Sbjct: 539 RRNSRVGILHSISRDGSVDVGFIGMETLWKGSCTNLQMAESYCKGQFVRLKANVLSPRFE 598

Query: 360 WPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTCPGMVK 419
           WPRKR G WATGRI  V+PNGCL+V FPGRL  G++CSSFLADPAEVE+V+FNT PG+VK
Sbjct: 599 WPRKRGGAWATGRIWQVLPNGCLVVNFPGRLPIGDECSSFLADPAEVELVSFNTSPGLVK 658

Query: 420 KYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRK--LRGAKAKKLQSSVIQKDGQHVDGQ 477
           KYQHLED HWAVRPL IALGLF+AM+ G  VG+K  +  +K K+ QS++ Q + Q +D Q
Sbjct: 659 KYQHLEDFHWAVRPLLIALGLFSAMKFGIFVGKKIGIGRSKEKRGQSTMTQNESQRLDNQ 718

Query: 478 VAGNPAWLPPSMA 490
            AGN AWLP ++A
Sbjct: 719 TAGNAAWLPQTVA 731

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430314|ref|XP_002282747.1| PREDICTED: uncharacterized protein LOC100268069 [Vitis vinifera] gi|147822641|emb|CAN70648.1| hypothetical protein VITISV_025237 [Vitis vinifera]

 Score =  733 bits (1893), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/493 (70%), Positives = 415/493 (84%), Gaps = 3/493 (0%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           MKFYEGS+GD+MA LKGGKLSL ++ RY IDLAQ IL+LHSK ILVLNLKP+NF+L++ D
Sbjct: 127 MKFYEGSLGDKMAHLKGGKLSLRDILRYGIDLAQAILELHSKEILVLNLKPYNFLLDQND 186

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
            A+LGD+GIP+LLL IPLPSSD+ RRLGTPNYMAPEQWQPEVRGP+S ETDSWGF CSI+
Sbjct: 187 EAILGDLGIPYLLLQIPLPSSDIARRLGTPNYMAPEQWQPEVRGPLSLETDSWGFGCSIV 246

Query: 121 EMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
           EMLTGVQP CG+SV+E++D+VVR+QE P IPSGLPPAVE V++GCF YD RSRP M +IL
Sbjct: 247 EMLTGVQPWCGKSVEEVHDSVVRKQEKPFIPSGLPPAVERVIIGCFAYDFRSRPSMKNIL 306

Query: 181 RVFKSSQNSVHSDGGWTGHGSRILPDKS-SSGYTEWFLSKEDLKVDDVVRSRKPPNSFKP 239
             FKSS+N+V+SDGGWTG GSR + D    +GY+EWFLSKE+  V D+VRSRKPP+S KP
Sbjct: 307 EAFKSSENAVYSDGGWTGLGSRTITDNFIVNGYSEWFLSKENFLVGDLVRSRKPPHSCKP 366

Query: 240 ENMDVPEGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVRLKEED 299
           ENMDVP G VVG+E +++ + +VLVRV GIHDPLRVH   LERVT GLAAGDWVRL+ ED
Sbjct: 367 ENMDVPGGTVVGLERDSDQDGYVLVRVLGIHDPLRVHKYTLERVTSGLAAGDWVRLETED 426

Query: 300 RRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVVSPQFE 359
           RR+S VGILHSI RDGSV VGF+G+ETLWKG  + LQMAESYC GQFVRLKANV+SP+FE
Sbjct: 427 RRNSRVGILHSISRDGSVDVGFIGMETLWKGSCTNLQMAESYCKGQFVRLKANVLSPRFE 486

Query: 360 WPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTCPGMVK 419
           WPRKR G WATGRI  V+PNGCL+V FPGRL  G++CSSFLADPAEVE+V+FNT PG+VK
Sbjct: 487 WPRKRGGAWATGRIWQVLPNGCLVVNFPGRLPIGDECSSFLADPAEVELVSFNTSPGLVK 546

Query: 420 KYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRK--LRGAKAKKLQSSVIQKDGQHVDGQ 477
           KYQHLED HWAVRPL IALGLF+AM+ G  VG+K  +  +K K+ QS++ Q + Q +D Q
Sbjct: 547 KYQHLEDFHWAVRPLLIALGLFSAMKFGIFVGKKIGIGRSKEKRGQSTMTQNESQRLDNQ 606

Query: 478 VAGNPAWLPPSMA 490
            AGN AWLP ++A
Sbjct: 607 TAGNAAWLPQTVA 619

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255548886|ref|XP_002515499.1| protein kinase, putative [Ricinus communis] gi|223545443|gb|EEF46948.1| protein kinase, putative [Ricinus communis]

 Score =  730 bits (1884), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/506 (69%), Positives = 424/506 (83%), Gaps = 3/506 (0%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           M+FYEGS+GD+MA+ KGGK+SL++V RY I+LAQG+L+LH+K +LVLNLK  NF+LNE D
Sbjct: 127 MRFYEGSIGDKMARRKGGKISLADVLRYGIELAQGVLELHAKDLLVLNLKSSNFLLNEND 186

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
           +A+LGDVGIP+LLLGIPL SSD+   LGTPNYMAPEQWQPEVRGP+S ETDSWGFAC ++
Sbjct: 187 QAILGDVGIPYLLLGIPLRSSDMSYMLGTPNYMAPEQWQPEVRGPLSAETDSWGFACGVV 246

Query: 121 EMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
           EMLTG+QP  GRSV+EIYD VVR+QE P IP GLPP VENVL  CFEYD R+RPLM DIL
Sbjct: 247 EMLTGIQPWSGRSVEEIYDLVVRKQEKPRIPEGLPPPVENVLHSCFEYDFRNRPLMKDIL 306

Query: 181 RVFKSSQNSVHSDGGWTGHGSRILPDKSS-SGYTEWFLSKEDLKVDDVVRSRKPPNSFKP 239
           R+FKSSQN+V+ DGGW   GSR + DKS  +GY++WFL K+ L+V D VRSRKP NS K 
Sbjct: 307 RIFKSSQNAVYGDGGWRELGSRTILDKSGGTGYSKWFLLKDHLQVGDTVRSRKPLNSSKS 366

Query: 240 ENMDVPEGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVRLKEED 299
           ENMDVPE  VVG+E + + + F+LVRV GIHDPLRV +  LERVTFGLAAGDWVRLKEE+
Sbjct: 367 ENMDVPEAIVVGLERDADQDGFLLVRVLGIHDPLRVPILTLERVTFGLAAGDWVRLKEEN 426

Query: 300 RRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVVSPQFE 359
           +RHSPVGILHSI RDGSVAVGF+G+ET WKG+ SELQMA+SY VGQFVRLKA ++SP+FE
Sbjct: 427 KRHSPVGILHSINRDGSVAVGFIGVETFWKGNSSELQMAKSYFVGQFVRLKAKILSPRFE 486

Query: 360 WPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTCPGMVK 419
           WPRKR+G WATG+I  ++PNGCL+V FPGRLTFGE+ ++FLADP EVE V+FNTCPGMVK
Sbjct: 487 WPRKRQGAWATGKIRHILPNGCLVVNFPGRLTFGEEHNTFLADPGEVEEVSFNTCPGMVK 546

Query: 420 KYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRKLRGAKAKKLQSSVIQKDGQHVDGQVA 479
           KYQHLED+HWAVRPL IALGLFTAM++G  VG+K+  +K +KL+S+V+Q D Q + G  +
Sbjct: 547 KYQHLEDIHWAVRPLLIALGLFTAMKVGVFVGKKMGRSKGRKLESNVVQNDDQPMAGPSS 606

Query: 480 GNP--AWLPPSMANMLSKGTSAAAGR 503
           G+   AW PPS+AN+L   T+AA  R
Sbjct: 607 GHSGQAWFPPSVANILGVTTAAAPPR 632

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224089274|ref|XP_002308671.1| predicted protein [Populus trichocarpa] gi|222854647|gb|EEE92194.1| predicted protein [Populus trichocarpa]

 Score =  727 bits (1876), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/455 (77%), Positives = 402/455 (88%), Gaps = 1/455 (0%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           MKFYEGSVGD+MA+LKGGKLSL +V RY I LAQGI QLH+K ILV NLKP +F+LNE D
Sbjct: 126 MKFYEGSVGDKMARLKGGKLSLPDVLRYGIVLAQGIAQLHAKEILVFNLKPCSFLLNEND 185

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
           +AVLGDVGIP LL GIPLPS+D+ RRLGTPNYMAPEQWQPE+RGP+SFETDSWGF CS++
Sbjct: 186 QAVLGDVGIPFLLFGIPLPSADMSRRLGTPNYMAPEQWQPEIRGPVSFETDSWGFGCSVV 245

Query: 121 EMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
           EMLTGVQP  G+SV+EIY++VVR+QE P IP GLPP VENVLLGCFEYDLRSRPLMTDI+
Sbjct: 246 EMLTGVQPWRGKSVEEIYESVVRKQEKPRIPEGLPPPVENVLLGCFEYDLRSRPLMTDIV 305

Query: 181 RVFKSSQNSVHSDGGWTGHGSRILPDK-SSSGYTEWFLSKEDLKVDDVVRSRKPPNSFKP 239
           RVFKSSQN+V  DGGWTG GSR   +K S +GYTEWFLSK+ L+V D+VRSR+PPNS KP
Sbjct: 306 RVFKSSQNAVFVDGGWTGFGSRTTLEKFSGTGYTEWFLSKDHLQVGDMVRSRRPPNSCKP 365

Query: 240 ENMDVPEGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVRLKEED 299
           ENMDVPEG VVG+E + + + FVLVRVHGIHDPLR+ VS LERVTFGLAAGDWV LKEED
Sbjct: 366 ENMDVPEGTVVGLERDPDRDGFVLVRVHGIHDPLRLPVSTLERVTFGLAAGDWVHLKEED 425

Query: 300 RRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVVSPQFE 359
           RRHSPVGILHSI+RDGSVAVGF+G+ETLWKG+ SELQMAE Y VGQFVR +ANV+SP+FE
Sbjct: 426 RRHSPVGILHSIKRDGSVAVGFIGVETLWKGNSSELQMAEPYFVGQFVRPRANVLSPRFE 485

Query: 360 WPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTCPGMVK 419
           WPRK  G WATGRI  ++PNGCLIV+FPGRLT G++ SSFLADPAEVEVV+FN+CPG+VK
Sbjct: 486 WPRKTGGAWATGRIWWILPNGCLIVKFPGRLTIGQENSSFLADPAEVEVVSFNSCPGVVK 545

Query: 420 KYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRKL 454
           KYQH ED HWAVRPL IALG+FTAM++GF VG+K+
Sbjct: 546 KYQHFEDFHWAVRPLVIALGIFTAMKVGFFVGKKI 580

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225442924|ref|XP_002265172.1| PREDICTED: uncharacterized protein LOC100268161 isoform 1 [Vitis vinifera] gi|359482371|ref|XP_003632763.1| PREDICTED: uncharacterized protein LOC100268161 isoform 2 [Vitis vinifera]

 Score =  703 bits (1814), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/505 (66%), Positives = 409/505 (80%), Gaps = 3/505 (0%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           MKFYEGSVGDRMA LKGGKL LS+V RY I+LA+GI++LHS G+LVLNLKP NF+LNE D
Sbjct: 127 MKFYEGSVGDRMAHLKGGKLPLSDVLRYGIELAKGIMELHSTGVLVLNLKPSNFLLNEHD 186

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
           + VLGD+GIP+LLLGIPLP+ D+  RLGTPNYMAPEQW+PEVRGPIS ETD+WGF CSI+
Sbjct: 187 QVVLGDMGIPYLLLGIPLPNPDMVLRLGTPNYMAPEQWEPEVRGPISCETDTWGFGCSIV 246

Query: 121 EMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
           EMLTGVQP CGRS++EIY +VV +QE P IPSGLPP VENVL GCFEYDLR+RPLM DIL
Sbjct: 247 EMLTGVQPWCGRSIEEIYQSVVIKQEKPHIPSGLPPEVENVLNGCFEYDLRNRPLMVDIL 306

Query: 181 RVFKSSQNSVHSDGGWTGHGSRILPDKSSS-GYTEWFLSKEDLKVDDVVRSRKPPNSFKP 239
           + F+SSQN+V+SDGGW G  SR   ++S+S GYT WFLSK+ L V D+VRSRKP N+ KP
Sbjct: 307 QAFESSQNAVYSDGGWIGLESRTCTERSNSRGYTSWFLSKDSLHVGDIVRSRKPLNACKP 366

Query: 240 ENMDVPEGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVRLKEED 299
           + MDVPEG VVG + + + + FVLV++ G H+PLRVHVS LERVT GL   DWVRLKE +
Sbjct: 367 QIMDVPEGTVVGFDGDNDRDGFVLVKIRGKHNPLRVHVSTLERVTSGLVVTDWVRLKEPN 426

Query: 300 RRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVVSPQFE 359
           R+HS VGILHS+QRDGSVAVGFLGLETLW+GH SELQMAE+Y VGQFVRLK NV +P+F+
Sbjct: 427 RKHSTVGILHSVQRDGSVAVGFLGLETLWRGHSSELQMAETYYVGQFVRLKTNVFTPRFD 486

Query: 360 WPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTCPGMVK 419
           WPRK+ G W TGRI  V+PNGCL+VRFPGR  FG + +SFLADPAEVE+V+F+ C G+V+
Sbjct: 487 WPRKKGGAWVTGRIAQVLPNGCLVVRFPGRFVFGVESNSFLADPAEVELVSFDKCHGVVE 546

Query: 420 KYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRKLRGAKAKKLQSSVIQKDGQHVDGQVA 479
           KY H+ED HWAVRPL IA G+FT +++G  VG  +   + +K   ++   DGQ  DGQ  
Sbjct: 547 KYHHIEDFHWAVRPLVIAFGVFTTLKLGVFVGGNV-CVRMRKSPRNLTPNDGQCQDGQAG 605

Query: 480 GNPAWLPPSMANML-SKGTSAAAGR 503
           GNPAW+PP++AN+L  +G   A  R
Sbjct: 606 GNPAWIPPTVANILFREGPPTATAR 630

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437150|ref|XP_004136355.1| PREDICTED: uncharacterized protein LOC101208616 [Cucumis sativus] gi|449525714|ref|XP_004169861.1| PREDICTED: uncharacterized LOC101208616 [Cucumis sativus]

 Score =  701 bits (1808), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/494 (66%), Positives = 413/494 (83%), Gaps = 5/494 (1%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           MKFYEGS+ D+MA+LK GKLS  +V RY I+LAQGI +LHSK ILVLN+KP N +L   D
Sbjct: 127 MKFYEGSIADKMARLKDGKLSPPDVLRYGINLAQGIFELHSKEILVLNMKPSNMLLTTKD 186

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
           +A+LGD+GIP LL  +P+P+SD+ +RLGTPNYMAPEQWQPEVRGPIS+ETDSWGFAC II
Sbjct: 187 QAILGDIGIPFLLHSVPIPNSDIVQRLGTPNYMAPEQWQPEVRGPISYETDSWGFACCII 246

Query: 121 EMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
           EMLTGVQP  G+SVDEI+ +VVR+QE P IPSGLPP +ENVLLGCFEYDLRSRPLMTDIL
Sbjct: 247 EMLTGVQPWRGKSVDEIFHSVVRKQEKPCIPSGLPPLIENVLLGCFEYDLRSRPLMTDIL 306

Query: 181 RVFKSSQNSVHSDGGWTGHGS-RILPDKSSSGYTEWFLSKEDLKVDDVVRSRKPPNSFKP 239
            VF+S Q   H +G W   GS ++L   S++G+TEWFLSK+ L+V+D+VRSRKP NS K 
Sbjct: 307 NVFQSFQ---HVNGDWQAIGSSKVLNKSSATGHTEWFLSKDHLQVNDLVRSRKPLNSCKS 363

Query: 240 ENMDVPEGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVRLKEED 299
           +NM++PEG++VG+E  TE ++FVLVRV GIHDP+RV+ S LERV+FGLAAGDW+RLKE D
Sbjct: 364 DNMNIPEGKIVGLEGETEKDAFVLVRVRGIHDPVRVYASTLERVSFGLAAGDWIRLKEAD 423

Query: 300 RRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVVSPQFE 359
           ++HSPVGILHSI R G+VAV F+G+ETLWKG+ S+ QMAES+CVGQFVR+KA+++ P+FE
Sbjct: 424 KKHSPVGILHSIDRVGNVAVAFIGVETLWKGNSSQFQMAESFCVGQFVRIKASILRPRFE 483

Query: 360 WPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTCPGMVK 419
           W RK+  VWATG+I  ++PNGCL+V+FPG L+F E+C+S++ADPAEVEVV F+TCPGMVK
Sbjct: 484 WLRKKGSVWATGKIWWILPNGCLMVKFPGILSFKEECNSYMADPAEVEVVNFSTCPGMVK 543

Query: 420 KYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRKLRGAKAKKLQSSVIQKDGQHVDGQVA 479
           KYQHLED HW+VRP+ IA G+FTAM++G + G+  R +K KK QS+++  + QHV+GQ  
Sbjct: 544 KYQHLEDFHWSVRPILIAFGMFTAMKLGIAFGKVGR-SKVKKGQSNLVYCESQHVEGQNT 602

Query: 480 GNPAWLPPSMANML 493
            NPAW+PP + N+L
Sbjct: 603 NNPAWIPPPVKNIL 616

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553227|ref|XP_002517656.1| protein kinase, putative [Ricinus communis] gi|223543288|gb|EEF44820.1| protein kinase, putative [Ricinus communis]

 Score =  676 bits (1745), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/504 (65%), Positives = 400/504 (79%), Gaps = 5/504 (0%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           MKFY+GS+ DR+A +KGGKL LS++ RY IDLA+GI +LHS G+LVLNLKP NF++NE D
Sbjct: 159 MKFYKGSIADRIALVKGGKLQLSDILRYGIDLAKGIQELHSIGLLVLNLKPSNFLINEHD 218

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
            AVLGD GI  LL GIPL +S++  RLGTPNYMAPEQW+PEVRGPISFETDSWGF CSI+
Sbjct: 219 HAVLGDFGISFLLHGIPLLNSEMALRLGTPNYMAPEQWEPEVRGPISFETDSWGFGCSIV 278

Query: 121 EMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
           EMLTGVQP  G+S++EIY +VV +QE P IP+GLPPAVENVL GCF+YDLR+RPLM D+L
Sbjct: 279 EMLTGVQPFFGKSIEEIYQSVVIKQETPQIPNGLPPAVENVLGGCFQYDLRNRPLMEDVL 338

Query: 181 RVFKSSQNSVHSDGGWTGHGSRILPDKSSSGYTEWFLSKEDLKVDDVVRSRKPPNSFKPE 240
             F SSQN+V+S  GW G  SR L  KSS  YT W+LS+++L++ D VRSRKP N+ KP+
Sbjct: 339 HAFHSSQNAVNSGEGWVGLESRALSGKSSGSYTAWYLSRDNLQLGDTVRSRKPLNACKPQ 398

Query: 241 NMDVPEGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVRLKEEDR 300
            MDVP+G +VG + N +   FVLV+V G+H+PLRV  S LERVTFG A GDWV LKEE  
Sbjct: 399 TMDVPKGTLVGPDSNDDRNGFVLVKVAGLHNPLRVQESTLERVTFGFAEGDWVYLKEETS 458

Query: 301 RHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVVSPQFEW 360
            HSPVGILHS+QRDG VAVGF+GLETLW G +S+LQMA++Y VGQFVRLKAN+V+ +F+W
Sbjct: 459 MHSPVGILHSVQRDGGVAVGFVGLETLWMGTYSDLQMAKAYYVGQFVRLKANLVTARFKW 518

Query: 361 PRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTCPGMVKK 420
           PRKR G WATGRI  V+ NGCLIV FPGRL FG++ ++FLADPAEVEVV+F+TCPG+++K
Sbjct: 519 PRKRGGGWATGRISQVLSNGCLIVSFPGRLVFGDESNTFLADPAEVEVVSFDTCPGVMEK 578

Query: 421 YQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRKLRGAKAKKLQSSVIQKDGQHVDGQVAG 480
           YQH+ED HW+VRPL IALGLFTAM++  SVGR +    + KL+      +G   DGQ  G
Sbjct: 579 YQHVEDFHWSVRPLAIALGLFTAMKLTLSVGRSI----STKLRKGRKSGEGHSQDGQGGG 634

Query: 481 NPAWLPPSMANMLSK-GTSAAAGR 503
           N AWLPP +AN+L K G  AA  R
Sbjct: 635 NAAWLPPPVANILFKEGVPAATVR 658

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297743474|emb|CBI36341.3| unnamed protein product [Vitis vinifera]

 Score =  675 bits (1742), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/456 (69%), Positives = 381/456 (83%), Gaps = 1/456 (0%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           MKFYEGSVGDRMA LKGGKL LS+V RY I+LA+GI++LHS G+LVLNLKP NF+LNE D
Sbjct: 200 MKFYEGSVGDRMAHLKGGKLPLSDVLRYGIELAKGIMELHSTGVLVLNLKPSNFLLNEHD 259

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
           + VLGD+GIP+LLLGIPLP+ D+  RLGTPNYMAPEQW+PEVRGPIS ETD+WGF CSI+
Sbjct: 260 QVVLGDMGIPYLLLGIPLPNPDMVLRLGTPNYMAPEQWEPEVRGPISCETDTWGFGCSIV 319

Query: 121 EMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
           EMLTGVQP CGRS++EIY +VV +QE P IPSGLPP VENVL GCFEYDLR+RPLM DIL
Sbjct: 320 EMLTGVQPWCGRSIEEIYQSVVIKQEKPHIPSGLPPEVENVLNGCFEYDLRNRPLMVDIL 379

Query: 181 RVFKSSQNSVHSDGGWTGHGSRILPDKSSS-GYTEWFLSKEDLKVDDVVRSRKPPNSFKP 239
           + F+SSQN+V+SDGGW G  SR   ++S+S GYT WFLSK+ L V D+VRSRKP N+ KP
Sbjct: 380 QAFESSQNAVYSDGGWIGLESRTCTERSNSRGYTSWFLSKDSLHVGDIVRSRKPLNACKP 439

Query: 240 ENMDVPEGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVRLKEED 299
           + MDVPEG VVG + + + + FVLV++ G H+PLRVHVS LERVT GL   DWVRLKE +
Sbjct: 440 QIMDVPEGTVVGFDGDNDRDGFVLVKIRGKHNPLRVHVSTLERVTSGLVVTDWVRLKEPN 499

Query: 300 RRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVVSPQFE 359
           R+HS VGILHS+QRDGSVAVGFLGLETLW+GH SELQMAE+Y VGQFVRLK NV +P+F+
Sbjct: 500 RKHSTVGILHSVQRDGSVAVGFLGLETLWRGHSSELQMAETYYVGQFVRLKTNVFTPRFD 559

Query: 360 WPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTCPGMVK 419
           WPRK+ G W TGRI  V+PNGCL+VRFPGR  FG + +SFLADPAEVE+V+F+ C G+V+
Sbjct: 560 WPRKKGGAWVTGRIAQVLPNGCLVVRFPGRFVFGVESNSFLADPAEVELVSFDKCHGVVE 619

Query: 420 KYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRKLR 455
           KY H+ED HWAVRPL IA G+FT +++G  VG  ++
Sbjct: 620 KYHHIEDFHWAVRPLVIAFGVFTTLKLGVFVGGNVK 655

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297798736|ref|XP_002867252.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297313088|gb|EFH43511.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  661 bits (1705), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/489 (67%), Positives = 392/489 (80%), Gaps = 5/489 (1%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           MKFYEGSVGD+MA+LKGGKLSL +V RY +DLA GIL+LHSKG L+LNLKP NF+L++ D
Sbjct: 121 MKFYEGSVGDKMARLKGGKLSLPDVLRYGVDLATGILELHSKGFLILNLKPSNFLLSDND 180

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
           +AVLGDVGIP+LLL IPLPSSD+  RLGTP+YMAPEQWQPEVRGP+SFETDSWGF CSI+
Sbjct: 181 KAVLGDVGIPYLLLSIPLPSSDMTVRLGTPSYMAPEQWQPEVRGPMSFETDSWGFGCSIV 240

Query: 121 EMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
           EMLTGVQP  GRS DEIYD VVR+QE   IP+ +PP ++N+L GCF YDLRSRP MTDIL
Sbjct: 241 EMLTGVQPWSGRSADEIYDLVVRKQEKLSIPNTIPPPLDNLLRGCFMYDLRSRPSMTDIL 300

Query: 181 RVFKSSQNSVHSDGGWTGHGSR-ILPDKSSSGYTEWFLSKEDLKVDDVVRSRKPPNSFKP 239
            V KS Q S+  +  W G  SR I+    + GYTEWFLSK+ L+V D VRSRKP NS K 
Sbjct: 301 LVLKSLQ-SLEEEQVWRGIDSREIMKSSGTLGYTEWFLSKDHLQVGDTVRSRKPANSCKH 359

Query: 240 ENMDVPEGRVVGVEHN-TEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVRLK-E 297
           ENMDVPEG VVG+E + T+ + F+LV+VHG+HDPLRVHVS LERVT GLA+GDWVRLK  
Sbjct: 360 ENMDVPEGIVVGLERDTTDPDGFMLVKVHGVHDPLRVHVSVLERVTSGLASGDWVRLKVR 419

Query: 298 EDRRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVVSPQ 357
           +D+RHSPVG+LHSI R+G+VAVGF+GL TLWKG  S+LQMA++Y VGQFV+LK NVV P+
Sbjct: 420 KDKRHSPVGVLHSIDREGNVAVGFIGLPTLWKGTSSQLQMAKAYSVGQFVKLKTNVVIPR 479

Query: 358 FEWPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTCPGM 417
           F+W RK  G+WATGRI  V+PNGCL V FPG L FGE+  S LADPAEVE+V FNTC G+
Sbjct: 480 FKWMRKSRGIWATGRISQVLPNGCLEVDFPGVLPFGEEHGSCLADPAEVEIVNFNTCQGV 539

Query: 418 VKKYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRKL-RGAKAKKLQSSVIQKDGQHVDG 476
           VKKYQHLED+HWAVRPL IA+GL TAM++GF VG+K+ R    K+   S  Q D +  DG
Sbjct: 540 VKKYQHLEDIHWAVRPLLIAMGLLTAMKLGFFVGKKIGRSKDGKQRDGSSGQDDCKIPDG 599

Query: 477 QVAGNPAWL 485
           + +G   WL
Sbjct: 600 KGSGKSKWL 608

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	503
TAIR|locus:2116545	611	AT4G32250 [Arabidopsis thalian	0.962	0.792	0.650	2.9e-167
TAIR|locus:2185061	1625	KEG "AT5G13530" [Arabidopsis t	0.188	0.058	0.330	3.2e-26
DICTYBASE|DDB_G0278901	1495	DDB_G0278901 "protein kinase,	0.343	0.115	0.298	1.3e-10
TAIR|locus:2077244	391	ATMRK1 [Arabidopsis thaliana (	0.328	0.421	0.286	6.9e-10
WB|WBGene00008956	302	nekl-3 [Caenorhabditis elegans	0.341	0.569	0.256	8.8e-10
UNIPROTKB|G4NGK7	1484	MGG_04100 "STE/STE11/CDC15 pro	0.288	0.097	0.282	2.1e-09
TAIR|locus:2060246	372	MAPKKK17 "mitogen-activated pr	0.330	0.446	0.284	2.2e-09
WB|WBGene00003472	1420	mtk-1 [Caenorhabditis elegans	0.381	0.135	0.267	2.4e-09
TAIR|locus:2154573	525	AT5G58950 [Arabidopsis thalian	0.403	0.386	0.260	2.7e-09
UNIPROTKB|F1MZX0	676	PRKCD "Uncharacterized protein	0.341	0.254	0.284	3.2e-09

TAIR|locus:2116545 AT4G32250 [Arabidopsis thaliana (taxid:3702)]

 Score = 1627 (577.8 bits), Expect = 2.9e-167, P = 2.9e-167
 Identities = 318/489 (65%), Positives = 377/489 (77%)

Query:     1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
             MKFYEGS+GD+MA+LKGGKLSL +V RY +DLA GIL+LHSKG L+LNLKP NF+L++ D
Sbjct:   121 MKFYEGSLGDKMARLKGGKLSLPDVLRYGVDLATGILELHSKGFLILNLKPSNFLLSDND 180

Query:    61 RAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
             +A+LGDV            SSD+  RLGTPNYMAPEQWQP+VRGP+SFETDSWGF CSI+
Sbjct:   181 KAILGDVGIPYLLLSIPLPSSDMTERLGTPNYMAPEQWQPDVRGPMSFETDSWGFGCSIV 240

Query:   121 EMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
             EMLTGVQP  GRS DEIYD VVR+QE   IPS +PP +EN+L GCF YDLRSRP MTDIL
Sbjct:   241 EMLTGVQPWSGRSADEIYDLVVRKQEKLSIPSSIPPPLENLLRGCFMYDLRSRPSMTDIL 300

Query:   181 RVFKSSQNSVHSDGGWTGHGSRILPDKSSS-GYTEWFLSKEDLKVDDVVRSRKPPNSFKP 239
              V KS QNS   +    G  SR +   S++ GYTEWFLSK+ L+V D VRSRKP NS K 
Sbjct:   301 LVLKSLQNS-EEEQVRRGIDSREIRKSSATLGYTEWFLSKDHLQVRDTVRSRKPANSCKH 359

Query:   240 ENMDVPEGRVVGVEHN-TEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVRLK-E 297
             ENMDVPEG VVG+E + T+ + FVLV+VHG+HDPLRVHVS LERVT GLA+GDWVRLK  
Sbjct:   360 ENMDVPEGMVVGLERDSTDPDGFVLVKVHGVHDPLRVHVSVLERVTNGLASGDWVRLKVR 419

Query:   298 EDRRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVVSPQ 357
             +D+RHSPVG+LHSI R+G+VAVGF+GL TLWKG  S+LQMA+ Y VGQFV+LKANVV P+
Sbjct:   420 KDKRHSPVGVLHSIDREGNVAVGFIGLPTLWKGTSSQLQMAKVYSVGQFVKLKANVVIPR 479

Query:   358 FEWPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTFNTCPGM 417
             F+W RK  G+WATGRI  V+PNGCL V FPG L FGE+  S+LADPAEVE+V FNTC G 
Sbjct:   480 FKWMRKGRGIWATGRISQVLPNGCLEVDFPGMLPFGEEHGSYLADPAEVEIVNFNTCQGA 539

Query:   418 VKKYQHLEDLHWAVRPLFIALGLFTAMQMGFSVGRKL-RGAKAKKLQSSVIQKDGQHVDG 476
             V+KYQHLED HWAVRPL IA+GL TAM++G  V +K+ R    K+   S  Q D +  DG
Sbjct:   540 VEKYQHLEDFHWAVRPLLIAMGLLTAMKLGICVRKKIGRSKDGKQRDGSTGQGDCKIPDG 599

Query:   477 QVAGNPAWL 485
             + +    WL
Sbjct:   600 KGSDKSKWL 608

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

GO:0010260 "organ senescence" evidence=RCA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2185061 KEG "AT5G13530" [Arabidopsis thaliana (taxid:3702)]

 Score = 160 (61.4 bits), Expect = 3.2e-26, Sum P(3) = 3.2e-26
 Identities = 35/106 (33%), Positives = 57/106 (53%)

Query:    89 TPNYMAPEQWQP------EVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV 142
             +P+Y APE W P      E    +S E+D+W F C+++EM TG  P  G S +EI+ AVV
Sbjct:   321 SPHYTAPEAWGPVKKLFWEDASGVSPESDAWSFGCTLVEMCTGSTPWDGLSREEIFQAVV 380

Query:   143 RRQEIPP-----IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 183
             + +++PP     +  G+P  +  ++  C ++    RP    +L  F
Sbjct:   381 KARKVPPQYERIVGVGIPRELWKMIGECLQFKPSKRPTFNAMLATF 426

GO:0004672 "protein kinase activity" evidence=ISS;IDA

GO:0005737 "cytoplasm" evidence=ISM

GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009738 "abscisic acid mediated signaling pathway" evidence=IGI;IMP

GO:0016567 "protein ubiquitination" evidence=IDA

GO:0048589 "developmental growth" evidence=IMP

GO:0006952 "defense response" evidence=IMP

GO:0009737 "response to abscisic acid stimulus" evidence=IMP

GO:0009788 "negative regulation of abscisic acid mediated signaling pathway" evidence=IMP

GO:0005769 "early endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0043621 "protein self-association" evidence=IPI

GO:0000956 "nuclear-transcribed mRNA catabolic process" evidence=RCA

GO:0016197 "endosomal transport" evidence=IMP

GO:0032940 "secretion by cell" evidence=IMP

DICTYBASE|DDB_G0278901 DDB_G0278901 "protein kinase, STE group" [Dictyostelium discoideum (taxid:44689)]

 Score = 186 (70.5 bits), Expect = 1.3e-10, P = 1.3e-10
 Identities = 54/181 (29%), Positives = 87/181 (48%)

Query:     1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
             M+F E    +++ + + G L  S V  Y   +  G+  LH +G++  ++K  N +++   
Sbjct:   101 MEFIENGSLEKIIK-RHGLLPESLVTVYIAQVLNGLEYLHRQGVIHRDIKAANLLISTDG 159

Query:    61 RAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
                L D             + D     GTP +MAPE  Q  ++G IS   D W   C+II
Sbjct:   160 SIKLADFGVATKVSDLSSDNPD-DTFAGTPYWMAPEVIQ--MQG-ISTACDVWSLGCTII 215

Query:   121 EMLTGVQPRCGRS-VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
             E+LTG  P  G +    +Y  V  +++ PPIP G+  A+++ LL CF+ D   R     +
Sbjct:   216 ELLTGTPPYFGLAPAAALYKIV--QEDHPPIPPGISAALKDFLLNCFKKDENIRSSAKQL 273

Query:   180 L 180
             L
Sbjct:   274 L 274

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0046872 "metal ion binding" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

TAIR|locus:2077244 ATMRK1 [Arabidopsis thaliana (taxid:3702)]

 Score = 171 (65.3 bits), Expect = 6.9e-10, P = 6.9e-10
 Identities = 49/171 (28%), Positives = 80/171 (46%)

Query:    19 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 78
             KL + +V + A+DLA+G+  LHSK I+  ++K  N +L       + D            
Sbjct:   204 KLPIKDVIQLALDLARGLSYLHSKAIVHRDVKSENMLLQPNKTLKIADFGVARVEAQN-- 261

Query:    79 XSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIY 138
                D+    GT  YMAPE  + +   P + + D + F   + E+     P    S  EI 
Sbjct:   262 -PQDMTGETGTLGYMAPEVLEGK---PYNRKCDVYSFGVCLWEIYCCDMPYADCSFAEIS 317

Query:   139 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNS 189
              AVV R   P IP   P AV N++  C++ +   RP M +++++ ++   S
Sbjct:   318 HAVVHRNLRPEIPKCCPHAVANIMKRCWDPNPDRRPEMEEVVKLLEAIDTS 368

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS;TAS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

WB|WBGene00008956 nekl-3 [Caenorhabditis elegans (taxid:6239)]

 Score = 167 (63.8 bits), Expect = 8.8e-10, P = 8.8e-10
 Identities = 47/183 (25%), Positives = 85/183 (46%)

Query:    16 KGGKL-SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXX 74
             KGG+L     +++Y + LA+ +  +HSK I+  ++KP N  +       LGD+       
Sbjct:   117 KGGRLIPEKTIWKYFVQLARALAHMHSKRIMHRDIKPANVFITGNGIVKLGDLGLGRFFS 176

Query:    75 XXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV 134
                  +  L   +GTP YM+PE+ Q    G  +F++D W   C + EM     P  G  +
Sbjct:   177 SKTTAAHSL---VGTPYYMSPERIQES--G-YNFKSDLWSTGCLLYEMAALQSPFYGDKM 230

Query:   135 DEIYDAV--VRRQEIPPIPSGL-PPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVH 191
             + +Y     +   E PP+P+ +    + +++  C   +   RP  +++L+V +   N   
Sbjct:   231 N-LYSLCKKIENCEYPPLPADIYSTQLRDLVSRCILPEASKRPETSEVLQVAEHMNNYFS 289

Query:   192 SDG 194
               G
Sbjct:   290 PSG 292

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0040011 "locomotion" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0002009 "morphogenesis of an epithelium" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

UNIPROTKB|G4NGK7 MGG_04100 "STE/STE11/CDC15 protein kinase" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 163 (62.4 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
 Identities = 43/152 (28%), Positives = 71/152 (46%)

Query:    18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
             GK   + V  Y   + QG+  LH +G++  ++K  N +  +  +  L D           
Sbjct:   151 GKFPENLVGVYMTQVLQGLQYLHDQGVIHRDIKGANILTTKDGKVKLADFGVSTSTLAGP 210

Query:    78 XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
                + +   +GTP +MAPE  Q  + G  S  +D W   C++IE+L G  P    +    
Sbjct:   211 DKEAQV---VGTPYWMAPEIIQ--LSGATS-ASDIWSVGCTVIELLQGKPPYHNLAPMPA 264

Query:   138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYD 169
               A+V   + PP+P G+ PA  + L+ CF+ D
Sbjct:   265 LFAIVN-DDHPPLPEGVSPAARDFLMQCFQKD 295

GO:0005575 "cellular_component" evidence=ND

TAIR|locus:2060246 MAPKKK17 "mitogen-activated protein kinase kinase kinase 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 166 (63.5 bits), Expect = 2.2e-09, P = 2.2e-09
 Identities = 51/179 (28%), Positives = 86/179 (48%)

Query:     6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
             G++ D  A+  GG++  + V +Y  D+ +G+  +HSKGI+  ++K  N +++E   A + 
Sbjct:    85 GTLTDAAAK-DGGRVDETRVVKYTRDILKGLEYIHSKGIVHCDVKGSNVVISEKGEAKIA 143

Query:    66 DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
             D              S +   +GTP +MAPE  + E +G    E+D W   C++IEM+TG
Sbjct:   144 DFGCAKRVDPVF--ESPV---MGTPAFMAPEVARGEKQGK---ESDIWAVGCTMIEMVTG 195

Query:   126 VQPRCGRSVDEIYDAVVRR----QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
               P       E   +V+ R     E P +P  L    ++ L  C + +   R   T +L
Sbjct:   196 SPPWTKADSREDPVSVLYRVGYSSETPELPCLLAEEAKDFLEKCLKREANERWTATQLL 254

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

WB|WBGene00003472 mtk-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 174 (66.3 bits), Expect = 2.4e-09, P = 2.4e-09
 Identities = 54/202 (26%), Positives = 87/202 (43%)

Query:    18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
             GK+ L  V +Y   L + +  LHS  I+  ++KP N  L++     LGD           
Sbjct:  1212 GKMDLKMVRQYTNSLLRAVQYLHSHKIIHRDIKPANIFLDKCTVLKLGDFGCSSRLVESS 1271

Query:    78 XXSSDLPRRLGTPNYMAPEQW----QPEVRGPISF---ETDSWGFACSIIEMLTGVQPRC 130
                 +     GTP +MAPE +    + E  G  S      D W    +++ M+TG  P  
Sbjct:  1272 TVYGEFQTTAGTPQFMAPEIYSYGEKDETTGSYSGYGRSVDIWALGATVVNMMTGKVPFE 1331

Query:   131 GRSVDEIYDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN 188
             G++  +I  A+  R++ P  P  +   P V+     CFE+    RP   ++L+   ++ N
Sbjct:  1332 GQTRHQIAFALCFRKQKPTYPDIADKRPDVKRFFDNCFEFLPNDRPTAAELLQTTFANVN 1391

Query:   189 SVHSDGGWT-GHGSRILPDKSS 209
                 D      + S+   DKSS
Sbjct:  1392 ITFQDENHIPDYQSQSSKDKSS 1413

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0016246 "RNA interference" evidence=IMP

TAIR|locus:2154573 AT5G58950 [Arabidopsis thaliana (taxid:3702)]

 Score = 168 (64.2 bits), Expect = 2.7e-09, P = 2.7e-09
 Identities = 55/211 (26%), Positives = 93/211 (44%)

Query:     5 EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
             EGS+   + + +   L L  +  +AID+A+G+  +HS+ I+  +LKP N +++E     +
Sbjct:   292 EGSLRSFLHKPENRSLPLKKLIEFAIDIARGMEYIHSRRIIHRDLKPENVLIDEEFHLKI 351

Query:    65 GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
              D             + D P   GT  +MAPE  +   R P   + D + F   + EM+ 
Sbjct:   352 ADFGIACEEEYCDMLADD-P---GTYRWMAPEMIK---RKPHGRKADVYSFGLVLWEMVA 404

Query:   125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
             G  P    +  +   AVV +   P IP   P A++ ++  C+      RP    I++V +
Sbjct:   405 GAIPYEDMNPIQAAFAVVHKNIRPAIPGDCPVAMKALIEQCWSVAPDKRPEFWQIVKVLE 464

Query:   185 SSQNSVHSDGGWTGHGSRILPDKSSSGYTEW 215
                 S+  +G      S+I  D    G   W
Sbjct:   465 QFAISLEREGNLNLSSSKICKDPRK-GLKHW 494

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

UNIPROTKB|F1MZX0 PRKCD "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 169 (64.5 bits), Expect = 3.2e-09, P = 3.2e-09
 Identities = 52/183 (28%), Positives = 84/183 (45%)

Query:     1 MKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
             M+F  G  GD M  ++  G+  LS    YA ++  G+  LH KGI+  +LK  N +L+ +
Sbjct:   427 MEFLNG--GDLMYHIQDKGRFELSRATFYAAEIVCGLQFLHQKGIIYRDLKLDNVLLDHS 484

Query:    60 DRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
                 + D             +S      GTP+Y+APE  Q       SF  D W F   +
Sbjct:   485 GHIKIADFGMCKENMSGDRQASTF---CGTPDYIAPEILQGL---KYSFSVDWWSFGVLL 538

Query:   120 IEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
              EML G  P  G   DE+++++  R + P  P  +    +++L    E D+  R  +T  
Sbjct:   539 YEMLIGQSPFHGDDEDELFESI--RLDSPYYPRWITKESKDILEKLLERDVSKRLGVTGN 596

Query:   180 LRV 182
             +++
Sbjct:   597 IKI 599

GO:2001022 "positive regulation of response to DNA damage stimulus" evidence=IEA

GO:2000755 "positive regulation of sphingomyelin catabolic process" evidence=IEA

GO:2000753 "positive regulation of glucosylceramide catabolic process" evidence=IEA

GO:2000304 "positive regulation of ceramide biosynthetic process" evidence=IEA

GO:1900163 "positive regulation of phospholipid scramblase activity" evidence=IEA

GO:0090398 "cellular senescence" evidence=IEA

GO:0090331 "negative regulation of platelet aggregation" evidence=IEA

GO:0051490 "negative regulation of filopodium assembly" evidence=IEA

GO:0050732 "negative regulation of peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0046627 "negative regulation of insulin receptor signaling pathway" evidence=IEA

GO:0043560 "insulin receptor substrate binding" evidence=IEA

GO:0043407 "negative regulation of MAP kinase activity" evidence=IEA

GO:0042742 "defense response to bacterium" evidence=IEA

GO:0042119 "neutrophil activation" evidence=IEA

GO:0042100 "B cell proliferation" evidence=IEA

GO:0035307 "positive regulation of protein dephosphorylation" evidence=IEA

GO:0034351 "negative regulation of glial cell apoptotic process" evidence=IEA

GO:0032930 "positive regulation of superoxide anion generation" evidence=IEA

GO:0032615 "interleukin-12 production" evidence=IEA

GO:0032613 "interleukin-10 production" evidence=IEA

GO:0030837 "negative regulation of actin filament polymerization" evidence=IEA

GO:0023021 "termination of signal transduction" evidence=IEA

GO:0019899 "enzyme binding" evidence=IEA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA

GO:0016363 "nuclear matrix" evidence=IEA

GO:0016064 "immunoglobulin mediated immune response" evidence=IEA

GO:0008047 "enzyme activator activity" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0004697 "protein kinase C activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	503
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	7e-26
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	6e-21
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-19
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-18
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	6e-18
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	1e-17
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-17
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-16
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	3e-14
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	4e-14
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	2e-13
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	4e-13
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	5e-13
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	6e-13
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	2e-12
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	9e-12
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	9e-12
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	1e-11
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	2e-11
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	2e-11
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	3e-11
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	3e-11
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	4e-11
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	4e-11
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	1e-10
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	1e-10
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	2e-10
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	2e-10
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-10
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	3e-10
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	4e-10
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	5e-10
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	7e-10
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	8e-10
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	2e-09
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	2e-09
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	2e-09
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	3e-09
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	3e-09
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	6e-09
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	9e-09
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	9e-09
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	1e-08
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	1e-08
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	1e-08
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	2e-08
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	2e-08
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	2e-08
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	2e-08
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	3e-08
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	3e-08
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	4e-08
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	4e-08
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	5e-08
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	5e-08
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	7e-08
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	7e-08
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	7e-08
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	1e-07
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	2e-07
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	7e-07
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	7e-07
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	8e-07
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	2e-06
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	2e-06
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	2e-06
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	3e-06
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	3e-06
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	4e-06
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	5e-06
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	6e-06
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	9e-06
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	9e-06
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	1e-05
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	1e-05
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	1e-05
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	1e-05
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	1e-05
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	2e-05
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	2e-05
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	2e-05
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	2e-05
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	3e-05
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	3e-05
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	3e-05
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	3e-05
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	4e-05
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	4e-05
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	4e-05
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	4e-05
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	4e-05
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	4e-05
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	5e-05
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	5e-05
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	7e-05
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	7e-05
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	7e-05
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	7e-05
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	9e-05
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	1e-04
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	1e-04
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	1e-04
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	1e-04
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	1e-04
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	1e-04
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	1e-04
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	1e-04
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	1e-04
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	2e-04
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	2e-04
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	2e-04
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	2e-04
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	2e-04
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	3e-04
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	3e-04
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	3e-04
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	3e-04
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	3e-04
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	3e-04
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	5e-04
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	6e-04
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	6e-04
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	7e-04
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	8e-04
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	0.001
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	0.001
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	0.001
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	0.001
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	0.001
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	0.001
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	0.001
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	0.001
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	0.001
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	0.002
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	0.002
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	0.002
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	0.002
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	0.002
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	0.002
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	0.002
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	0.002
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	0.003
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	0.003
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	0.003
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	0.003
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	0.003
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	0.003
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	0.004
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	0.004
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	0.004
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	0.004
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	0.004

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  106 bits (266), Expect = 7e-26
 Identities = 50/173 (28%), Positives = 72/173 (41%), Gaps = 13/173 (7%)

Query: 6   GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
           GS+   +   K GKL    + +Y   + +G+  LHS GI+  ++K  N +++      L 
Sbjct: 86  GSLSSLLK--KFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLA 143

Query: 66  DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIEML 123
           D G    L  I         R GTP +MA     PEV          D W   C++IEM 
Sbjct: 144 DFGCAKRLGDIETGEGTGSVR-GTPYWMA-----PEVIRGEEYGRAADIWSLGCTVIEMA 197

Query: 124 TGVQP--RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
           TG  P    G  +  +Y  +    E P IP  L    ++ L  C   D + RP
Sbjct: 198 TGKPPWSELGNPMAALY-KIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRP 249

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 91.7 bits (228), Expect = 6e-21
 Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 9/156 (5%)

Query: 25  VFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLP 84
           ++R  I L +G+  LH + IL  +LK  N +L   D   +GD+GI  +L      +    
Sbjct: 105 IWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKT---- 160

Query: 85  RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR 144
            ++GTP+YMAPE W+     P S+++D W   C + EM T   P   RS+ ++   V R 
Sbjct: 161 -QIGTPHYMAPEVWK---GRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRG 216

Query: 145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
           +  PPIP      ++N +    +   + RP    IL
Sbjct: 217 K-YPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKIL 251

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 86.5 bits (215), Expect = 2e-19
 Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 41/185 (22%)

Query: 1   MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M++ E GS+ D + +   GKLS   + R  + + +G+  LHS GI+  +LKP N +L+  
Sbjct: 70  MEYCEGGSLKDLLKE-NEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSD 128

Query: 60  D-RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACS 118
           + +  L D G+  LL             +GTP YMAPE    +  G  S ++D W     
Sbjct: 129 NGKVKLADFGLSKLLTSDKSLLKT---IVGTPAYMAPEVLLGK--GYYSEKSDIWSLGVI 183

Query: 119 IIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTD 178
           + E+                                 P +++++    + D   RP   +
Sbjct: 184 LYEL---------------------------------PELKDLIRKMLQKDPEKRPSAKE 210

Query: 179 ILRVF 183
           IL   
Sbjct: 211 ILEHL 215

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 84.5 bits (210), Expect = 2e-18
 Identities = 44/168 (26%), Positives = 70/168 (41%), Gaps = 9/168 (5%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG 75
           K G+LS      Y   +   +  LHSKGI+  +LKP N +L+E     L D G+   L  
Sbjct: 90  KRGRLSEDEARFYLRQILSALEYLHSKGIVHRDLKPENILLDEDGHVKLADFGLARQLDP 149

Query: 76  IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS-V 134
               ++     +GTP YMAPE              D W     + E+LTG  P  G   +
Sbjct: 150 GEKLTT----FVGTPEYMAPEVLL---GKGYGKAVDIWSLGVILYELLTGKPPFPGDDQL 202

Query: 135 DEIYDAVVRRQEIPPIPS-GLPPAVENVLLGCFEYDLRSRPLMTDILR 181
            E++  + + +   P P   + P  ++++      D   R    + L+
Sbjct: 203 LELFKKIGKPKPPFPPPEWDISPEAKDLIRKLLVKDPEKRLTAEEALQ 250

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 83.3 bits (206), Expect = 6e-18
 Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 16/186 (8%)

Query: 1   MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M++ E G +   +   +G  L    V+R+ I +  G+  LHSK IL  ++K  N  L+  
Sbjct: 78  MEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAY 137

Query: 60  DRAVLGDVGIPHLLLGIPLPSSDLPRR-LGTPNYMAPEQWQPEVRGPISFETDSWGFACS 118
           D   +GD+G+  LL      +++     +GTP Y++PE  + +   P + ++D W     
Sbjct: 138 DNVKIGDLGVAKLL----SDNTNFANTIVGTPYYLSPELCEDK---PYNEKSDVWALGVV 190

Query: 119 IIEMLTGVQPRCGRSVDEIYDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL 175
           + E  TG  P    +      A++    R   PP+       +  ++  C   D R RP 
Sbjct: 191 LYECCTGKHPFDANN----QGALILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPD 246

Query: 176 MTDILR 181
              +LR
Sbjct: 247 TFQLLR 252

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 84.4 bits (207), Expect = 1e-17
 Identities = 47/178 (26%), Positives = 69/178 (38%), Gaps = 15/178 (8%)

Query: 18  GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV-LGDVGIPHLLLGI 76
           G LS S        +   +  LHSKGI+  ++KP N +L+   R V L D G+  LL   
Sbjct: 96  GPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP 155

Query: 77  PLPSSDLPR---RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS 133
              SS        +GTP YMAPE          S  +D W    ++ E+LTG+ P  G  
Sbjct: 156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEK 215

Query: 134 VDEIYDAVVR-----------RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
                   ++               P  P  +  A  ++L      D ++R   +  L
Sbjct: 216 NSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDL 273

Length = 384

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 81.4 bits (202), Expect = 2e-17
 Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 16/187 (8%)

Query: 1   MKFYEGSVGDRMAQLK-----GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI 55
           M++ +G  GD   ++K     G       +  + + L   +  LHS+ IL  ++KP N  
Sbjct: 78  MEYADG--GDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIF 135

Query: 56  LNEADRAVLGDVGIPHLLLGIPLPSSDLPR-RLGTPNYMAPEQWQPEVRGPISFETDSWG 114
           L       LGD GI  +L      + DL +  +GTP Y++PE  Q     P ++++D W 
Sbjct: 136 LTSNGLVKLGDFGISKVLSS----TVDLAKTVVGTPYYLSPELCQ---NKPYNYKSDIWS 188

Query: 115 FACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
             C + E+ T   P  G ++ E+   +++ Q  PPIPS     + N++    + D   RP
Sbjct: 189 LGCVLYELCTLKHPFEGENLLELALKILKGQ-YPPIPSQYSSELRNLVSSLLQKDPEERP 247

Query: 175 LMTDILR 181
            +  IL+
Sbjct: 248 SIAQILQ 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 79.6 bits (197), Expect = 1e-16
 Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 10/171 (5%)

Query: 15  LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL 74
            +GG LS     + A+ + +G+  LHS GI+  +LKP N +L+E     + D G+   LL
Sbjct: 90  SRGGPLSEDEAKKIALQILRGLEYLHSNGIIHRDLKPENILLDENGVVKIADFGLAKKLL 149

Query: 75  GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP---RCG 131
                SS L   +GTP YMAPE            + D W     + E+LTG  P      
Sbjct: 150 K---SSSSLTTFVGTPWYMAPEVLL--GGNGYGPKVDVWSLGVILYELLTGKPPFSGENI 204

Query: 132 RSVDEIYDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
               ++   ++        P  S      ++++  C   D   RP   +IL
Sbjct: 205 LDQLQLIRRILGPPLEFDEPKWSSGSEEAKDLIKKCLNKDPSKRPTAEEIL 255

Length = 260

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 72.3 bits (178), Expect = 3e-14
 Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 11/159 (6%)

Query: 18  GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP 77
           G    S V  Y   + QG+  LH +G++  ++K  N +  +     L D G     +   
Sbjct: 94  GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFG-----VATK 148

Query: 78  LPSSDLPRR--LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD 135
           L          +GTP +MAPE  +       S  +D W   C++IE+LTG  P    +  
Sbjct: 149 LNDVSKDDASVVGTPYWMAPEVIEMS---GASTASDIWSLGCTVIELLTGNPPYYDLNPM 205

Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
                +V+    PP+P G+ P +++ L+ CF+ D   RP
Sbjct: 206 AALFRIVQDDH-PPLPEGISPELKDFLMQCFQKDPNLRP 243

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 72.1 bits (177), Expect = 4e-14
 Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 5/178 (2%)

Query: 6   GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
           GSV D++     G L+ +   +Y   + +G+  LHS  I+  ++K  N + + A    LG
Sbjct: 89  GSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLG 146

Query: 66  DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
           D G    L  I    + +    GTP +M+PE    E  G    + D W   C+++EMLT 
Sbjct: 147 DFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGR---KADVWSVGCTVVEMLTE 203

Query: 126 VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 183
             P            +  +   P +PS + P   N L   F  + + RP   ++LR F
Sbjct: 204 KPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHF 261

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 69.9 bits (172), Expect = 2e-13
 Identities = 46/179 (25%), Positives = 68/179 (37%), Gaps = 32/179 (17%)

Query: 12  MAQLKGGKLS--LSNVFR--------YAIDLAQGILQLHSKGILVLNLKPFNFILNEADR 61
           +    GG+L   LS   R        YA ++   +  LHS GI+  +LKP N +L+    
Sbjct: 72  LEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGH 131

Query: 62  AVLGDVGIPHLLLGIPLPSSDLPRRL-------GTPNYMAPEQWQPEVRGPISFETDSWG 114
             L D G+          + +L           GTP Y+APE              D W 
Sbjct: 132 IKLTDFGL----------AKELSSEGSRTNTFCGTPEYLAPEVLL---GKGYGKAVDWWS 178

Query: 115 FACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
               + EMLTG  P       EIY+ +++       P  L P   +++ G  + D   R
Sbjct: 179 LGVLLYEMLTGKPPFYAEDRKEIYEKILKDP--LRFPEFLSPEARDLISGLLQKDPTKR 235

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 68.8 bits (169), Expect = 4e-13
 Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 9/126 (7%)

Query: 1   MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M+F   GS+ D + +     L+ S +     +L +G+  LHS GI+  ++K  N +L   
Sbjct: 76  MEFCSGGSLKDLL-KSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSD 134

Query: 60  DRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
               L D G+   L      ++     +GTP +MAPE        P  ++ D W    + 
Sbjct: 135 GEVKLIDFGLSAQLSDTKARNT----MVGTPYWMAPEVIN---GKPYDYKADIWSLGITA 187

Query: 120 IEMLTG 125
           IE+  G
Sbjct: 188 IELAEG 193

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 69.1 bits (170), Expect = 5e-13
 Identities = 38/160 (23%), Positives = 59/160 (36%), Gaps = 22/160 (13%)

Query: 18  GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRA---------VLGDVG 68
           G L       YA ++   +  LHSKGI+  +LKP N +L++             VL    
Sbjct: 97  GSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNS 156

Query: 69  IPHLLLGIPLPSSDLPRRL--------GTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
            P    G          +         GT  Y++PE        P    +D W   C I 
Sbjct: 157 SPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLN---EKPAGKSSDLWALGCIIY 213

Query: 121 EMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVEN 160
           +MLTG  P  G +    +  +++ +     P   PP  ++
Sbjct: 214 QMLTGKPPFRGSNEYLTFQKILKLE--YSFPPNFPPDAKD 251

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 68.8 bits (168), Expect = 6e-13
 Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 16/129 (12%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           +K++  +VG+R        L +  V  Y+  +  GIL LHS  I+  ++KP N +L++  
Sbjct: 80  LKYHIYNVGER-------GLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQG 132

Query: 61  RAVLGDVGIPHLLLGIPLPSSD-LPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
              L D+G     L + L     + +R GT  YMAPE  + E   P S+  D +   CSI
Sbjct: 133 NCRLSDLG-----LAVELKDGKTITQRAGTNGYMAPEILKEE---PYSYPVDWFAMGCSI 184

Query: 120 IEMLTGVQP 128
            EM+ G  P
Sbjct: 185 YEMVAGRTP 193

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 67.3 bits (164), Expect = 2e-12
 Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 12/184 (6%)

Query: 1   MKFYEGSVGD---RMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN 57
           M F EG  GD   ++ + KG  L  + V  + + +A  +  LH K IL  +LK  N  L 
Sbjct: 79  MGFCEG--GDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLT 136

Query: 58  EADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFAC 117
             +   +GD+GI  +L      +S L   +GTP YM+PE +  +   P ++++D W   C
Sbjct: 137 RTNIIKVGDLGIARVLENQCDMASTL---IGTPYYMSPELFSNK---PYNYKSDVWALGC 190

Query: 118 SIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMT 177
            + EM T       + ++ +   ++   ++PP+P    P +  ++          RP + 
Sbjct: 191 CVYEMATLKHAFNAKDMNSLVYRII-EGKLPPMPKDYSPELGELIATMLSKRPEKRPSVK 249

Query: 178 DILR 181
            ILR
Sbjct: 250 SILR 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 65.4 bits (159), Expect = 9e-12
 Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 15/121 (12%)

Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPR-R 86
           YA ++  G+  LH +  +  +LKP N +L++     + D+G     L + +P  +  R R
Sbjct: 107 YAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLG-----LAVKIPEGESIRGR 161

Query: 87  LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE 146
           +GT  YMAPE    +         D WG  C I EM+ G  P  GR         V+R+E
Sbjct: 162 VGTVGYMAPEVLNNQRYT---LSPDYWGLGCLIYEMIEGQSPFRGRK------EKVKREE 212

Query: 147 I 147
           +
Sbjct: 213 V 213

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 65.0 bits (158), Expect = 9e-12
 Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 8/177 (4%)

Query: 6   GSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
           GS+ D   QLK  G L+ +   RY   + QG+  LHS  I+  ++K  N + + A    L
Sbjct: 91  GSIKD---QLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKL 147

Query: 65  GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
           GD G    +  I +  + +    GTP +M+PE    E  G    + D W  AC+++EMLT
Sbjct: 148 GDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGR---KADVWSVACTVVEMLT 204

Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
              P            +  +   P +P G+  A  + L   F  + + RP    +LR
Sbjct: 205 EKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRDFLKQIF-VEEKRRPTAEFLLR 260

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 64.8 bits (158), Expect = 1e-11
 Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 17/147 (11%)

Query: 1   MKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M++  G  GD  + +K  G L      +Y  ++  G+  LH +GI+  ++KP N ++++ 
Sbjct: 76  MEYLNG--GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQT 133

Query: 60  DRAVLGDVGIPHLLLGIPLPSSDLPRRL-GTPNYMAPEQWQPEVRG-PISFETDSWGFAC 117
               L D G+    L          ++  GTP+Y+APE     + G      +D W   C
Sbjct: 134 GHLKLTDFGLSRNGL--------ENKKFVGTPDYLAPET----ILGVGDDKMSDWWSLGC 181

Query: 118 SIIEMLTGVQPRCGRSVDEIYDAVVRR 144
            I E L G  P    + D ++D ++ R
Sbjct: 182 VIFEFLFGYPPFHAETPDAVFDNILSR 208

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 64.4 bits (157), Expect = 2e-11
 Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 12/155 (7%)

Query: 34  QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYM 93
           +G+  LHSKGIL  +LK  N +++      + D GI      I     ++  + G+  +M
Sbjct: 119 EGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQ-GSVFWM 177

Query: 94  APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR---RQEIPPI 150
           APE      +G  S + D W   C ++EM  G +P    S +E   A+ +   ++  PPI
Sbjct: 178 APEVIHSYSQG-YSAKVDIWSLGCVVLEMFAGRRP---WSDEEAIAAMFKLGNKRSAPPI 233

Query: 151 P----SGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
           P      L P   + L  CF  +  +RP   ++L+
Sbjct: 234 PPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 64.6 bits (157), Expect = 2e-11
 Identities = 53/175 (30%), Positives = 82/175 (46%), Gaps = 13/175 (7%)

Query: 1   MKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M+F  G  GD M  ++  G+  L     YA ++  G+  LHSKGI+  +LK  N +L+  
Sbjct: 75  MEFLNG--GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRD 132

Query: 60  DRAVLGDVGI-PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACS 118
               + D G+    + G    S+      GTP+Y+APE  Q       +F  D W F   
Sbjct: 133 GHIKIADFGMCKENVFGDNRAST----FCGTPDYIAPEILQGL---KYTFSVDWWSFGVL 185

Query: 119 IIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
           + EML G  P  G   DE+++++  R + P  P  +    +++L   FE D   R
Sbjct: 186 LYEMLIGQSPFHGDDEDELFESI--RVDTPHYPRWITKESKDILEKLFERDPTRR 238

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 64.4 bits (157), Expect = 3e-11
 Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 11/174 (6%)

Query: 1   MKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M++  G  GD M  ++  G+   +    YA ++  G+  LH KGI+  +LK  N +L++ 
Sbjct: 75  MEYLNG--GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKD 132

Query: 60  DRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
               + D G+    +     +S      GTP+Y+APE  + +     +   D W F   +
Sbjct: 133 GHIKIADFGMCKENMNGEGKASTF---CGTPDYIAPEILKGQK---YNESVDWWSFGVLL 186

Query: 120 IEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
            EML G  P  G   DE++D++    + P  P  +    ++ L   FE D   R
Sbjct: 187 YEMLIGQSPFHGEDEDELFDSI--LNDRPHFPRWISKEAKDCLSKLFERDPTKR 238

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 63.6 bits (154), Expect = 3e-11
 Identities = 52/177 (29%), Positives = 79/177 (44%), Gaps = 8/177 (4%)

Query: 6   GSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
           GSV D   QLK  G L+ S   +Y   + +G+  LHS  I+  ++K  N + + A    L
Sbjct: 91  GSVKD---QLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKL 147

Query: 65  GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
           GD G    L  I +  + +    GTP +M+PE    E  G    + D W   C+++EMLT
Sbjct: 148 GDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGR---KADVWSLGCTVVEMLT 204

Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
              P            +  +   P +PS +     +  LGC   + R RP   ++LR
Sbjct: 205 EKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARD-FLGCIFVEARHRPSAEELLR 260

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 63.8 bits (155), Expect = 4e-11
 Identities = 47/146 (32%), Positives = 68/146 (46%), Gaps = 8/146 (5%)

Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL 87
           YA ++A  I  LHS  I+  +LKP N +L+     VL D G+     G+  P        
Sbjct: 101 YAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCK--EGVE-PEETTSTFC 157

Query: 88  GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
           GTP Y+APE  + E   P     D W     + EML G+ P   R V ++YD ++ +   
Sbjct: 158 GTPEYLAPEVLRKE---PYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPL- 213

Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSR 173
             +P G   A  ++L+G    D R R
Sbjct: 214 -QLPGGKTVAACDLLVGLLHKDQRRR 238

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 63.3 bits (154), Expect = 4e-11
 Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 9/110 (8%)

Query: 20  LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP 79
              +    YA  +  G+  LH + I+  +LKP N +L++      G+V I  L L + L 
Sbjct: 92  FPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDD-----HGNVRISDLGLAVELK 146

Query: 80  SSDLPR-RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
                + R GTP YMAPE  Q EV     F  D +   C++ EM+ G  P
Sbjct: 147 GGKKIKGRAGTPGYMAPEVLQGEV---YDFSVDWFALGCTLYEMIAGRSP 193

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 62.2 bits (151), Expect = 1e-10
 Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 9/118 (7%)

Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPR-R 86
           YA ++  G+  LH + I+  +LKP N +L++      G + I  L L + +P  +  R R
Sbjct: 107 YAAEITCGLEDLHRERIVYRDLKPENILLDD-----YGHIRISDLGLAVEIPEGETIRGR 161

Query: 87  LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR 144
           +GT  YMAPE  + E     +F  D WG  C I EM+ G  P   R      + V RR
Sbjct: 162 VGTVGYMAPEVVKNE---RYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERR 216

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 61.4 bits (150), Expect = 1e-10
 Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 13/182 (7%)

Query: 6   GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
           G + D + + +  +LSLS++  +A+ +A+G+  L SK  +  +L   N ++ E     + 
Sbjct: 86  GDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKIS 145

Query: 66  DVGIPHLLLGIPLPSSDLPRRLGTP---NYMAPEQWQPEVRGPISFETDSWGFACSIIEM 122
           D G     L   L   D  +  G      +MAPE  +    G  + ++D W F   + E+
Sbjct: 146 DFG-----LSRDLYDDDYYKVKGGKLPIRWMAPESLK---EGKFTSKSDVWSFGVLLWEI 197

Query: 123 LT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
            T G +P  G S  E+ + + +     P P   PP +  ++L C+  D   RP  ++++ 
Sbjct: 198 FTLGEEPYPGMSNAEVLEYLKKG-YRLPKPPNCPPELYKLMLQCWAEDPEDRPTFSELVE 256

Query: 182 VF 183
           + 
Sbjct: 257 IL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 60.9 bits (148), Expect = 2e-10
 Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 14/158 (8%)

Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV-LGDVGIPHLLLGIPLPSSDLPRR 86
           Y   +  G+  LH +  +  ++K  N IL + +  V L D G+   ++      S     
Sbjct: 107 YTRQILLGLEYLHDRNTVHRDIKGAN-ILVDTNGVVKLADFGMAKQVVEFSFAKS----F 161

Query: 87  LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV---VR 143
            G+P +MAPE    +  G      D W   C+++EM TG  P    S  E   AV    R
Sbjct: 162 KGSPYWMAPEVIAQQ--GGYGLAADIWSLGCTVLEMATGKPPW---SQLEGVAAVFKIGR 216

Query: 144 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
            +E+PPIP  L    ++ +L C + D   RP   ++L 
Sbjct: 217 SKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 61.0 bits (148), Expect = 2e-10
 Identities = 55/189 (29%), Positives = 77/189 (40%), Gaps = 27/189 (14%)

Query: 12  MAQLKGGKLSLSNVFR---------------YAIDLAQGILQLHSKGILVLNLKPFNFIL 56
           M Q+ GG  SLS + R               Y   + +G+  LH   I+  ++K  N ++
Sbjct: 84  MEQVPGG--SLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLV 141

Query: 57  NEADRAV-LGDVGIPHLLLGI-PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWG 114
           N     V + D G    L GI P   +      GT  YMAPE      RG      D W 
Sbjct: 142 NTYSGVVKISDFGTSKRLAGINPCTET----FTGTLQYMAPEVIDKGPRG-YGAPADIWS 196

Query: 115 FACSIIEMLTGVQP--RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 172
             C+I+EM TG  P    G     ++   + +   P IP  L    +N +L CFE D   
Sbjct: 197 LGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIH-PEIPESLSAEAKNFILRCFEPDPDK 255

Query: 173 RPLMTDILR 181
           R    D+L+
Sbjct: 256 RASAHDLLQ 264

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 61.0 bits (149), Expect = 2e-10
 Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 14/173 (8%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG 75
            G KL+L ++ + A+ +A+G+  L SK  +  +L   N ++ E     + D G+   +  
Sbjct: 95  HGEKLTLKDLLQMALQIAKGMEYLESKNFVHRDLAARNCLVTENLVVKISDFGLSRDIYE 154

Query: 76  ----IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRC 130
                      LP       +MAPE  +    G  + ++D W F   + E+ T G QP  
Sbjct: 155 DDYYRKRGGGKLP-----IKWMAPESLK---DGKFTSKSDVWSFGVLLWEIFTLGEQPYP 206

Query: 131 GRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 183
           G S +E+ + +       P P   P  +  ++L C+ YD   RP  ++++   
Sbjct: 207 GMSNEEVLELL-EDGYRLPRPENCPDELYELMLQCWAYDPEDRPTFSELVEDL 258

Length = 258

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 60.4 bits (147), Expect = 3e-10
 Identities = 39/144 (27%), Positives = 58/144 (40%), Gaps = 10/144 (6%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG 75
           +  K S   V  +  ++   +  LHSKGI+  ++KP N +L+E     + D  I   +  
Sbjct: 93  QKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKV-- 150

Query: 76  IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD 135
              P +      GTP YMAPE    +     S   D W    +  E L G +P  G S  
Sbjct: 151 --TPDTLTTSTSGTPGYMAPEVLCRQGY---SVAVDWWSLGVTAYECLRGKRPYRGHS-R 204

Query: 136 EIYDAVVRRQE--IPPIPSGLPPA 157
            I D +  +QE      P+     
Sbjct: 205 TIRDQIRAKQETADVLYPATWSTE 228

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 60.3 bits (146), Expect = 4e-10
 Identities = 47/192 (24%), Positives = 73/192 (38%), Gaps = 22/192 (11%)

Query: 3   FYEGSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           F E   G  ++ L  K G    + +  Y   L +G+  LH   I+  ++K  N +++   
Sbjct: 81  FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTG 140

Query: 61  RAV-LGDVGIPHLLLGIPLPSSDLPRR-------LGTPNYMAPEQWQPEVRGPISFETDS 112
           + + + D G    L      ++            LGT  +MAPE  + E  G      D 
Sbjct: 141 QRLRIADFGAAARL------AAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSC---DV 191

Query: 113 WGFACSIIEMLTGVQPRCGRSVDEIYDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYD 169
           W   C IIEM T   P            + +       P IP  L P + +V L C E  
Sbjct: 192 WSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQ 251

Query: 170 LRSRPLMTDILR 181
              RP   ++L+
Sbjct: 252 PEDRPPSRELLK 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 59.9 bits (146), Expect = 5e-10
 Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 14/182 (7%)

Query: 6   GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
           G +   + +    KLSLS++  +A+ +A+G+  L SK  +  +L   N ++ E     + 
Sbjct: 86  GDLLSYL-RKNRPKLSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKIS 144

Query: 66  DVGIPHLLLGIPLPSSDLPRRLGTP---NYMAPEQWQPEVRGPISFETDSWGFACSIIEM 122
           D G     L   L   D  R+ G      +MAPE  +    G  + ++D W F   + E+
Sbjct: 145 DFG-----LSRDLYDDDYYRKRGGKLPIRWMAPESLK---EGKFTSKSDVWSFGVLLWEI 196

Query: 123 LT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
            T G QP  G S +E+ + +       P P   PP + +++L C+  D   RP  ++++ 
Sbjct: 197 FTLGEQPYPGMSNEEVLEYLKNG-YRLPQPPNCPPELYDLMLQCWAEDPEDRPTFSELVE 255

Query: 182 VF 183
           + 
Sbjct: 256 IL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 59.6 bits (144), Expect = 7e-10
 Identities = 42/118 (35%), Positives = 57/118 (48%), Gaps = 9/118 (7%)

Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPR-R 86
           YA +L  G+  L  + I+  +LKP N +L+  DR   G + I  L L + +P  +  R R
Sbjct: 107 YAAELCCGLEDLQRERIVYRDLKPENILLD--DR---GHIRISDLGLAVQIPEGETVRGR 161

Query: 87  LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR 144
           +GT  YMAPE    E     +F  D WG  C I EM+ G  P   R      + V RR
Sbjct: 162 VGTVGYMAPEVINNE---KYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRR 216

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 60.0 bits (145), Expect = 8e-10
 Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 17/147 (11%)

Query: 1   MKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M++  G  GD M Q++  G+    +   YA ++A G+  LHSKGI+  +LK  N +L+  
Sbjct: 80  MEYVNG--GDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSE 137

Query: 60  DRAVLGDVGI--PHLLLGIPLPSSDLPRRLGTPNYMAPE--QWQPEVRGPISFETDSWGF 115
               + D G+   ++  G+   +       GTP+Y+APE   +QP  +       D W F
Sbjct: 138 GHIKIADFGMCKENMWDGVTTKTF-----CGTPDYIAPEIIAYQPYGK-----SVDWWAF 187

Query: 116 ACSIIEMLTGVQPRCGRSVDEIYDAVV 142
              + EML G  P  G   DE++ +++
Sbjct: 188 GVLLYEMLAGQAPFEGEDEDELFQSIM 214

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 58.2 bits (141), Expect = 2e-09
 Identities = 48/186 (25%), Positives = 76/186 (40%), Gaps = 26/186 (13%)

Query: 6   GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
           GS+ DR+ +   G   +S +  YA+ +A G+  L SK  +  +L   N +L   D+  +G
Sbjct: 80  GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIG 139

Query: 66  DVGIPHLLLGIPLPSSDLPRRLG--------TPNYMAPEQW-QPEVRGPISFE--TDSWG 114
           D G              L R L           +   P  W  PE     +F   +D W 
Sbjct: 140 DFG--------------LMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWM 185

Query: 115 FACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
           F  ++ EM T G +P  G S  +I   + +  E    P   P  + NV+L C+ ++   R
Sbjct: 186 FGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADR 245

Query: 174 PLMTDI 179
           P    +
Sbjct: 246 PTFAAL 251

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 59.0 bits (143), Expect = 2e-09
 Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 12/148 (8%)

Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL 87
           YA ++A  +  LHS  I+  +LKP N +L+     VL D G+     GI   S       
Sbjct: 101 YAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCK--EGIE-HSKTTSTFC 157

Query: 88  GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
           GTP Y+APE  + +   P     D W     + EML G+ P   R   E+YD ++ +   
Sbjct: 158 GTPEYLAPEVLRKQ---PYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNK--- 211

Query: 148 PP--IPSGLPPAVENVLLGCFEYDLRSR 173
            P  +   +  +  ++L G  + D   R
Sbjct: 212 -PLRLKPNISVSARHLLEGLLQKDRTKR 238

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 58.9 bits (142), Expect = 2e-09
 Identities = 44/155 (28%), Positives = 66/155 (42%), Gaps = 16/155 (10%)

Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL 87
           YA ++A  +  LHS  I+  +LKP N +L+     VL D G+    +     +       
Sbjct: 101 YAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE---HNGTTSTFC 157

Query: 88  GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
           GTP Y+APE    +   P     D W     + EML G+ P   R+  E+YD ++ +   
Sbjct: 158 GTPEYLAPEVLHKQ---PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK--- 211

Query: 148 PPIPSGLPPAVEN----VLLGCFEYDLRSRPLMTD 178
              P  L P + N    +L G  + D   R    D
Sbjct: 212 ---PLQLKPNITNSARHLLEGLLQKDRTKRLGAKD 243

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 58.2 bits (141), Expect = 3e-09
 Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 11/130 (8%)

Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL 87
           Y  ++ + +  LH  G +  +LKP NF+++ +    L D G+      +   +S     +
Sbjct: 106 YMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKG--IVTYANS----VV 159

Query: 88  GTPNYMAPEQWQPEVRGP-ISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE 146
           G+P+YMAPE     +RG    F  D W   C + E L G  P  G + +E ++ +   +E
Sbjct: 160 GSPDYMAPEV----LRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKE 215

Query: 147 IPPIPSGLPP 156
               P    P
Sbjct: 216 TLQRPVYDDP 225

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 57.7 bits (139), Expect = 3e-09
 Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 14/180 (7%)

Query: 6   GSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
           GS+ D   QLK  G L+ +   +Y   + +G+  LHS  I+  ++K  N + +      L
Sbjct: 91  GSIKD---QLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKL 147

Query: 65  GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
           GD G    L  I L  + +    GTP +M+PE    E  G    + D W   C+++EMLT
Sbjct: 148 GDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGR---KADIWSVGCTVVEMLT 204

Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV---LLGCFEYDLRSRPLMTDILR 181
              P    +  E   A+ +    P  P  LPP V +     L     + + RP   ++LR
Sbjct: 205 EKPP---WAEFEAMAAIFKIATQPTNPV-LPPHVSDHCRDFLKRIFVEAKLRPSADELLR 260

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 56.6 bits (137), Expect = 6e-09
 Identities = 52/197 (26%), Positives = 79/197 (40%), Gaps = 32/197 (16%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           M++  G   + + +  G  L    +  Y + L +G+  LHS GI+  ++KP N  L+   
Sbjct: 78  MEYCSGGTLEELLEH-GRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNG 136

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRR-----LGTPNYMAPEQWQPEVRGPISFET----- 110
              LGD G    L      ++           GTP YMAPE         I+        
Sbjct: 137 VIKLGDFGCAVKL----KNNTTTMGEEVQSLAGTPAYMAPEV--------ITGGKGKGHG 184

Query: 111 ---DSWGFACSIIEMLTGVQP--RCGRSVDEIYDAVVRRQEIPPIPS--GLPPAVENVLL 163
              D W   C ++EM TG +P          ++   V     PPIP    L P  ++ L 
Sbjct: 185 RAADIWSLGCVVLEMATGKRPWSELDNEFQIMFH--VGAGHKPPIPDSLQLSPEGKDFLD 242

Query: 164 GCFEYDLRSRPLMTDIL 180
            C E D + RP  +++L
Sbjct: 243 RCLESDPKKRPTASELL 259

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 56.5 bits (136), Expect = 9e-09
 Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 17/147 (11%)

Query: 1   MKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M++  G  GD M  ++  GK        YA +++ G+  LH +GI+  +LK  N +L+  
Sbjct: 80  MEYVNG--GDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSE 137

Query: 60  DRAVLGDVGI--PHLLLGIPLPSSDLPRRLGTPNYMAPE--QWQPEVRGPISFETDSWGF 115
               + D G+   H++ G+   +       GTP+Y+APE   +QP  +       D W +
Sbjct: 138 GHIKIADFGMCKEHMVDGVTTRTF-----CGTPDYIAPEIIAYQPYGK-----SVDWWAY 187

Query: 116 ACSIIEMLTGVQPRCGRSVDEIYDAVV 142
              + EML G  P  G   DE++ +++
Sbjct: 188 GVLLYEMLAGQPPFDGEDEDELFQSIM 214

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 56.6 bits (136), Expect = 9e-09
 Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 6/118 (5%)

Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL 87
           YA ++A  +  LHS  I+  +LKP N +L+     VL D G+    +     ++      
Sbjct: 101 YAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTF---C 157

Query: 88  GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ 145
           GTP Y+APE  + +   P     D W     + EML G+ P   R V E+YD ++ + 
Sbjct: 158 GTPEYLAPEVIRKQ---PYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKP 212

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 56.3 bits (136), Expect = 1e-08
 Identities = 45/147 (30%), Positives = 70/147 (47%), Gaps = 19/147 (12%)

Query: 1   MKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M++  G  GD M  ++  GK    +   YA ++A G+  LHSKGI+  +LK  N +L+  
Sbjct: 80  MEYVNG--GDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAE 137

Query: 60  DRAVLGDVGI--PHLLLGIPLPSSDLPRRL-GTPNYMAPE--QWQPEVRGPISFETDSWG 114
               + D G+   ++  G         R   GTP+Y+APE   +QP  +       D W 
Sbjct: 138 GHIKIADFGMCKENIFGG------KTTRTFCGTPDYIAPEIIAYQPYGKS-----VDWWA 186

Query: 115 FACSIIEMLTGVQPRCGRSVDEIYDAV 141
           F   + EML G  P  G   DE++ ++
Sbjct: 187 FGVLLYEMLAGQPPFDGEDEDELFQSI 213

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 55.8 bits (134), Expect = 1e-08
 Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 10/163 (6%)

Query: 25  VFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLP 84
           V++Y + L   +  +HS+ ++  ++KP N  +       LGD+G+          +  L 
Sbjct: 108 VWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL- 166

Query: 85  RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV--V 142
             +GTP YM+PE+         +F++D W   C + EM     P  G  ++ +Y     +
Sbjct: 167 --VGTPYYMSPERIH---ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLCKKI 220

Query: 143 RRQEIPPIPSG-LPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
            + + PP+PS      +  ++  C   D   RP +T +  V K
Sbjct: 221 EQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAK 263

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 56.2 bits (136), Expect = 1e-08
 Identities = 49/194 (25%), Positives = 80/194 (41%), Gaps = 25/194 (12%)

Query: 1   MKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M++  G  GD M  + + G+        YA ++  G+  LH +GI+  +LK  N +L+  
Sbjct: 75  MEYVNG--GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSE 132

Query: 60  DRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
               + D G+     GI L         GTP+Y+APE    +   P     D W     +
Sbjct: 133 GHIKIADFGMCK--EGI-LGGVTTSTFCGTPDYIAPEILSYQ---PYGPAVDWWALGVLL 186

Query: 120 IEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL-----------LGCFEY 168
            EML G  P  G   DE++ +++  +     P  L    +++L           LGC   
Sbjct: 187 YEMLAGQSPFEGDDEDELFQSILEDE--VRYPRWLSKEAKSILKSFLTKNPEKRLGCLPT 244

Query: 169 ---DLRSRPLMTDI 179
              D++  P   +I
Sbjct: 245 GEQDIKGHPFFREI 258

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 55.3 bits (134), Expect = 2e-08
 Identities = 34/140 (24%), Positives = 56/140 (40%), Gaps = 11/140 (7%)

Query: 44  ILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR--LGTPNYMAPEQWQPE 101
           +L  +LKP N  L+  +   LGD G     L   L       +  +GTP YM+PEQ    
Sbjct: 131 VLHRDLKPANIFLDANNNVKLGDFG-----LAKILGHDSSFAKTYVGTPYYMSPEQLN-- 183

Query: 102 VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENV 161
                  ++D W   C I E+     P   R+  ++  + ++  +   IP      +  V
Sbjct: 184 -HMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQL-ASKIKEGKFRRIPYRYSSELNEV 241

Query: 162 LLGCFEYDLRSRPLMTDILR 181
           +      D   RP   ++L+
Sbjct: 242 IKSMLNVDPDKRPSTEELLQ 261

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 55.1 bits (133), Expect = 2e-08
 Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 13/178 (7%)

Query: 6   GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
           G++ D++ + KG       V  Y   +   +  +H  GIL  ++K  N  L +A    LG
Sbjct: 84  GTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLG 143

Query: 66  DVGIPHLLLGIPLPSSDLPRR---LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEM 122
           D GI  +L       S+       +GTP YM+PE  Q       +F++D W   C + E+
Sbjct: 144 DFGISKIL------GSEYSMAETVVGTPYYMSPELCQGV---KYNFKSDIWALGCVLYEL 194

Query: 123 LTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
           LT  +     +   +   +V+     P+ S     + +++    + D   RP   ++L
Sbjct: 195 LTLKRTFDATNPLNLVVKIVQG-NYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVL 251

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 55.0 bits (132), Expect = 2e-08
 Identities = 48/186 (25%), Positives = 87/186 (46%), Gaps = 15/186 (8%)

Query: 1   MKFYEGSVGDRMAQL---KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN 57
           M++ +G  GD M ++   +G   S   +  + + ++ G+  +H + IL  ++K  N  L+
Sbjct: 78  MEYCDG--GDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLS 135

Query: 58  EADR-AVLGDVGIPHLLLGIPLPSSDLPRR-LGTPNYMAPEQWQPEVRGPISFETDSWGF 115
           +    A LGD GI   L      S +L    +GTP Y++PE  Q     P + +TD W  
Sbjct: 136 KNGMVAKLGDFGIARQLND----SMELAYTCVGTPYYLSPEICQNR---PYNNKTDIWSL 188

Query: 116 ACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL 175
            C + E+ T   P  G ++ ++   + +     PI       + +++   F+   R RP 
Sbjct: 189 GCVLYELCTLKHPFEGNNLHQLVLKICQGY-FAPISPNFSRDLRSLISQLFKVSPRDRPS 247

Query: 176 MTDILR 181
           +T IL+
Sbjct: 248 ITSILK 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 55.3 bits (133), Expect = 2e-08
 Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 9/150 (6%)

Query: 1   MKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M+F  G  GD M  + K  +   +    YA ++   ++ LH KGI+  +LK  N +L+  
Sbjct: 75  MEFVNG--GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHE 132

Query: 60  DRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
               L D G+    +     +S      GTP+Y+APE  Q  + GP     D W     +
Sbjct: 133 GHCKLADFGMCKEGIFNGKTTSTF---CGTPDYIAPEILQEMLYGP---SVDWWAMGVLL 186

Query: 120 IEMLTGVQPRCGRSVDEIYDAVVRRQEIPP 149
            EML G  P    + D++++A++  + + P
Sbjct: 187 YEMLCGHAPFEAENEDDLFEAILNDEVVYP 216

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 54.5 bits (131), Expect = 3e-08
 Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 14/185 (7%)

Query: 1   MKFYEGSVGD---RMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN 57
           M + EG  GD   ++   +G       +  + + +   +  +H + IL  ++K  N  L 
Sbjct: 78  MDYCEG--GDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT 135

Query: 58  EADRAVLGDVGIPHLLLGIPLPSSDLPRR-LGTPNYMAPEQWQPEVRGPISFETDSWGFA 116
           +     LGD GI  +L      + +L R  +GTP Y++PE  +     P + ++D W   
Sbjct: 136 KDGTIKLGDFGIARVLNS----TVELARTCIGTPYYLSPEICENR---PYNNKSDIWALG 188

Query: 117 CSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLM 176
           C + EM T        ++  +   ++R    PP+ S     + N++   F+ + R RP +
Sbjct: 189 CVLYEMCTLKHAFEAGNMKNLVLKIIR-GSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSV 247

Query: 177 TDILR 181
             IL 
Sbjct: 248 NSILE 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 54.6 bits (132), Expect = 3e-08
 Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 9/128 (7%)

Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD-----VGIPHLLLGIPLPSSD 82
           Y  ++   +  LHS GI+  +LKP N +++      L D     VG+    + +     +
Sbjct: 98  YIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKE 157

Query: 83  LPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV 142
             R +GTP+Y+APE     +    S   D W   C + E L G+ P  G + +EI+  ++
Sbjct: 158 DKRIVGTPDYIAPEVI---LGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNIL 214

Query: 143 RRQEIPPI 150
              +I   
Sbjct: 215 NG-KIEWP 221

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 54.1 bits (131), Expect = 4e-08
 Identities = 44/180 (24%), Positives = 80/180 (44%), Gaps = 26/180 (14%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG 75
           +   LSL ++  +AI +A+G+  L SK  +  +L   N ++ E     + D G     L 
Sbjct: 98  EKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFG-----LS 152

Query: 76  IPLPSSD---------LPRRLGTPNYMAPEQWQPEVRGPI-SFETDSWGFACSIIEMLT- 124
             +   D         LP R     +MAPE     ++  I + ++D W F   + E+ T 
Sbjct: 153 RDVYDDDYYRKKTGGKLPIR-----WMAPES----LKDGIFTSKSDVWSFGVLLWEIFTL 203

Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
           G  P  G S +E+ + + R+    P P   P  +  ++L C++ D   RP  ++++   +
Sbjct: 204 GATPYPGLSNEEVLEYL-RKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 54.4 bits (131), Expect = 4e-08
 Identities = 39/126 (30%), Positives = 54/126 (42%), Gaps = 11/126 (8%)

Query: 18  GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP 77
           G+ S S    YA ++   +  LHSK I+  +LKP N +L++     L D G    L    
Sbjct: 96  GRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKL---- 151

Query: 78  LPSSDLPRRL-GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE 136
               D    L GTP Y+APE  Q +         D W     I EML G  P    +   
Sbjct: 152 ---RDRTWTLCGTPEYLAPEVIQSKGHNK---AVDWWALGILIYEMLVGYPPFFDDNPFG 205

Query: 137 IYDAVV 142
           IY+ ++
Sbjct: 206 IYEKIL 211

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 54.6 bits (131), Expect = 5e-08
 Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 23/191 (12%)

Query: 1   MKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M++  G  GD M  ++   K  L     YA ++  G+  LHSKGI+  +LK  N +L+  
Sbjct: 75  MEYLNG--GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTD 132

Query: 60  DRAVLGDVGI-PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACS 118
               + D G+    +LG     +      GTP+Y+APE    +         D W F   
Sbjct: 133 GHIKIADFGMCKENMLG----DAKTCTFCGTPDYIAPEILLGQKYN---TSVDWWSFGVL 185

Query: 119 IIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCF----------EY 168
           + EML G  P  G   +E++ ++  R + P  P  L    +++L+  F          + 
Sbjct: 186 LYEMLIGQSPFHGHDEEELFQSI--RMDNPCYPRWLTREAKDILVKLFVREPERRLGVKG 243

Query: 169 DLRSRPLMTDI 179
           D+R  P   +I
Sbjct: 244 DIRQHPFFREI 254

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 53.9 bits (129), Expect = 5e-08
 Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 12/155 (7%)

Query: 29  AIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLG 88
           AI +A G+  L S   +  +L   N ++ E     + D+G     L   + S+D  R   
Sbjct: 130 AIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLG-----LSREIYSADYYRV-- 182

Query: 89  TPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR 144
            P  + P +W P    + G  S ++D W F   + E+ + G+QP  G S  E+ + +VR+
Sbjct: 183 QPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIE-MVRK 241

Query: 145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
           +++ P     PP + +++  C++     RP   DI
Sbjct: 242 RQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDI 276

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 53.4 bits (128), Expect = 7e-08
 Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 12/183 (6%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSL---SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN 57
           M++ +G  GD M ++K  +  L     + ++ + +  G+  +H K +L  ++K  N  L 
Sbjct: 77  MEYCDG--GDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLT 134

Query: 58  EADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFAC 117
           +  +  LGD G   LL     P +     +GTP Y+ PE W+     P + ++D W   C
Sbjct: 135 QNGKVKLGDFGSARLLTS---PGAYACTYVGTPYYVPPEIWE---NMPYNNKSDIWSLGC 188

Query: 118 SIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMT 177
            + E+ T   P    S   +   V  +    P+PS     + +++   F+ + RSRP  T
Sbjct: 189 ILYELCTLKHPFQANSWKNLILKVC-QGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSAT 247

Query: 178 DIL 180
            IL
Sbjct: 248 TIL 250

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 54.9 bits (132), Expect = 7e-08
 Identities = 46/134 (34%), Positives = 68/134 (50%), Gaps = 19/134 (14%)

Query: 40  HSKGILVLNLKPFNFILNEAD---RAVLGDVGIPHLLLGI-PLPSSDLPRR---LGTPNY 92
           H++GI+  +LKP N ++++      A + D GI  LL G+     + L R    LGTP Y
Sbjct: 96  HNQGIVHRDLKPQNIMVSQTGVRPHAKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTY 155

Query: 93  MAPEQWQPEVRGPISFETD--SWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPI 150
            APEQ + E   P++  +D  +WG     +E LTG +   G SV EI       Q++ P+
Sbjct: 156 CAPEQLRGE---PVTPNSDLYAWGLI--FLECLTGQRVVQGASVAEIL-----YQQLSPV 205

Query: 151 PSGLPPAVENVLLG 164
              LPP +    LG
Sbjct: 206 DVSLPPWIAGHPLG 219

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 53.0 bits (127), Expect = 7e-08
 Identities = 37/159 (23%), Positives = 74/159 (46%), Gaps = 17/159 (10%)

Query: 20  LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP 79
           +S+  + ++++D+A+G+  L SK ++  +L   N +++E   A + D G+  +       
Sbjct: 97  VSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARV------- 149

Query: 80  SSDLPRRLGTPNYMAPEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
                  +G  N   P +W  PE       S ++D W +   + E+ + G  P    S+ 
Sbjct: 150 -----GSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK 204

Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
           E+ + V +   + P P G P  V  ++  C+E + + RP
Sbjct: 205 EVKECVEKGYRMEP-PEGCPADVYVLMTSCWETEPKKRP 242

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 52.6 bits (126), Expect = 1e-07
 Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 12/175 (6%)

Query: 10  DRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV 67
            ++ +LK  G  LS + V  + I L  G+  +H + IL  +LK  N  L   +   +GD 
Sbjct: 91  CKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDF 149

Query: 68  GIPHLLLGIPLPSSDLPRRL-GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGV 126
           G+  LL+G    S DL     GTP YM+PE  + +  G  S ++D W   C + EM    
Sbjct: 150 GVSRLLMG----SCDLATTFTGTPYYMSPEALKHQ--GYDS-KSDIWSLGCILYEMCCLA 202

Query: 127 QPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
               G++   +   +V     P +P      + +++      D   RP   +ILR
Sbjct: 203 HAFEGQNFLSVVLRIV-EGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 51.9 bits (124), Expect = 2e-07
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 9/102 (8%)

Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSD-LPRR 86
           YA ++  G+  LH + I+  +LKP N +L++     + D+G     L + +P    +  R
Sbjct: 107 YAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLG-----LAVHVPEGQTIKGR 161

Query: 87  LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
           +GT  YMAPE  + E     +F  D W   C + EM+ G  P
Sbjct: 162 VGTVGYMAPEVVKNE---RYTFSPDWWALGCLLYEMIAGQSP 200

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 50.4 bits (120), Expect = 7e-07
 Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 7/129 (5%)

Query: 25  VFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLP 84
           V++Y + L   +  +HS+ ++  ++KP N  +       LGD+G+          +  L 
Sbjct: 108 VWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL- 166

Query: 85  RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI-YDAVVR 143
             +GTP YM+PE+         +F++D W   C + EM     P  G  ++       + 
Sbjct: 167 --VGTPYYMSPERIH---ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIE 221

Query: 144 RQEIPPIPS 152
           + + PP+P+
Sbjct: 222 QCDYPPLPT 230

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 50.1 bits (120), Expect = 7e-07
 Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 18/171 (10%)

Query: 25  VFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV-LGDVGIPHLLLGIPLPSSDL 83
           +++Y + L   +  +HSK I+  ++KP N  +  A   V LGD+G     LG    S   
Sbjct: 108 IWKYFVQLCSALEHMHSKRIMHRDIKPANVFIT-ATGVVKLGDLG-----LGRFFSSKTT 161

Query: 84  P--RRLGTPNYMAPEQWQPEVRGP-ISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDA 140
                +GTP YM+PE+    +     +F++D W   C + EM     P  G  ++ +Y  
Sbjct: 162 AAHSLVGTPYYMSPER----IHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSL 216

Query: 141 V--VRRQEIPPIPSGLPPA-VENVLLGCFEYDLRSRPLMTDILRVFKSSQN 188
              + + + PP+P+      + +++  C   D   RP ++ +L+V K    
Sbjct: 217 CKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMHA 267

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 50.6 bits (121), Expect = 8e-07
 Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 16/150 (10%)

Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR- 86
           Y  +LA  +  LHS GI+  +LKP N +L+E     L D G+          S D  ++ 
Sbjct: 103 YLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK-------ESIDHEKKA 155

Query: 87  ---LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR 143
               GT  YMAPE      R   +   D W F   + EMLTG  P  G+   E    +++
Sbjct: 156 YSFCGTVEYMAPEVVN---RRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILK 212

Query: 144 RQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
            +    +P  L P  +++L   F+ +  +R
Sbjct: 213 AKL--GMPQFLSPEAQSLLRALFKRNPANR 240

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 49.2 bits (118), Expect = 2e-06
 Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 21/113 (18%)

Query: 39  LHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR------LGTPNY 92
           LH++GI+  +LKP N +L+      L D G           +  L          GTP Y
Sbjct: 109 LHNRGIIYRDLKPENLLLDSNGYVKLVDFGF----------AKKLKSGQKTWTFCGTPEY 158

Query: 93  MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD--EIYDAVVR 143
           +APE      +G   F  D W     + E+LTG  P      D  EIY+ +++
Sbjct: 159 VAPEIILN--KG-YDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILK 208

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 49.2 bits (117), Expect = 2e-06
 Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 10/159 (6%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG 75
           + G+  LS    Y  +L   +  LH   ++  +LKP N +L+      L D G    L  
Sbjct: 86  REGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFG----LCK 141

Query: 76  IPLPSSDLPRRL-GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV 134
           + +   D      GTP Y+APE              D W     + EMLTG+ P    +V
Sbjct: 142 LNMKDDDKTNTFCGTPEYLAPELLLGHGYTKA---VDWWTLGVLLYEMLTGLPPFYDENV 198

Query: 135 DEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
           +E+Y  ++  QE    P G     +++L+G    D   R
Sbjct: 199 NEMYRKIL--QEPLRFPDGFDRDAKDLLIGLLSRDPTRR 235

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 49.3 bits (118), Expect = 2e-06
 Identities = 40/148 (27%), Positives = 60/148 (40%), Gaps = 20/148 (13%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           M++  G  GD M  +     S      YA  +  G+  LH   I+  +LK  N +L+   
Sbjct: 81  MEYAAG--GDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEG 138

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFET------DSWG 114
              + D G+    +G            GTP ++APE         +  ET      D WG
Sbjct: 139 FVKIADFGLCKEGMG---FGDRTSTFCGTPEFLAPE---------VLTETSYTRAVDWWG 186

Query: 115 FACSIIEMLTGVQPRCGRSVDEIYDAVV 142
               I EML G  P  G   +E++D++V
Sbjct: 187 LGVLIYEMLVGESPFPGDDEEEVFDSIV 214

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 48.9 bits (116), Expect = 3e-06
 Identities = 38/121 (31%), Positives = 54/121 (44%), Gaps = 7/121 (5%)

Query: 9   GDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV 67
           GD M  + +  KL   +   YA ++   +  LH +GI+  +LK  N +L+      L D 
Sbjct: 81  GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDY 140

Query: 68  GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ 127
           G+    LG   P        GTPNY+APE  + E  G   F  D W     + EM+ G  
Sbjct: 141 GMCKEGLG---PGDTTSTFCGTPNYIAPEILRGEEYG---FSVDWWALGVLMFEMMAGRS 194

Query: 128 P 128
           P
Sbjct: 195 P 195

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 48.4 bits (116), Expect = 3e-06
 Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 14/129 (10%)

Query: 6   GSVGDRMAQLKG--GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV 63
           GS+ D     +G   +L ++ V R  +   +G+  LH  G +  ++K  N +L E     
Sbjct: 85  GSLQDIYQVTRGPLSELQIAYVCRETL---KGLAYLHETGKIHRDIKGANILLTEDGDVK 141

Query: 64  LGDVGIPHLLLGIPLPSSDLPRR---LGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
           L D G+   L      ++ + +R   +GTP +MAPE    E +G    + D W    + I
Sbjct: 142 LADFGVSAQL------TATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAI 195

Query: 121 EMLTGVQPR 129
           E+     P 
Sbjct: 196 ELAELQPPM 204

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 48.1 bits (114), Expect = 4e-06
 Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 15/119 (12%)

Query: 34  QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR---LGTP 90
           Q +  LHS+G++  ++K  + +L    R  L D G    +      S D+P+R   +GTP
Sbjct: 128 QALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQI------SKDVPKRKSLVGTP 181

Query: 91  NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP 149
            +MAPE      R P   E D W     +IEM+ G  P      D    A+ R ++ PP
Sbjct: 182 YWMAPEVIS---RTPYGTEVDIWSLGIMVIEMVDGEPPYFS---DSPVQAMKRLRDSPP 234

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 48.0 bits (114), Expect = 5e-06
 Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 11/161 (6%)

Query: 27  RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL--LGIPLPSSDLP 84
           +Y   +  G+  LH+  ++  ++K  N +L       L D G    L  +G+    S++ 
Sbjct: 106 KYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNML 165

Query: 85  RRL-GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE---IYDA 140
           + + GTP +MAPE       G  S   D W   C++ EM TG  P    S+D    ++  
Sbjct: 166 KSMHGTPYWMAPEVINESGYGRKS---DIWSIGCTVFEMATGKPPLA--SMDRLAAMFYI 220

Query: 141 VVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
              R  +P +P     A  + +  C   D   RP    +LR
Sbjct: 221 GAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 47.5 bits (113), Expect = 6e-06
 Identities = 40/190 (21%), Positives = 76/190 (40%), Gaps = 26/190 (13%)

Query: 1   MKFYEGSVGDRMAQLKGGK-LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M++  G       Q +    L    +  + + +   +  +H+K IL  +LK  N +L++ 
Sbjct: 78  MEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKH 137

Query: 60  DRAV-LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACS 118
              V +GD GI  +L       S     +GTP Y++PE  + +   P + ++D W   C 
Sbjct: 138 KMVVKIGDFGISKILSS----KSKAYTVVGTPCYISPELCEGK---PYNQKSDIWALGCV 190

Query: 119 IIEMLTGVQPRCGRSVDEIYDAV--------VRRQEIPPIPSGLPPAVENVLLGCFEYDL 170
           + E+          S+   ++A         +      PI     P +  ++L     D 
Sbjct: 191 LYELA---------SLKRAFEAANLPALVLKIMSGTFAPISDRYSPDLRQLILSMLNLDP 241

Query: 171 RSRPLMTDIL 180
             RP ++ I+
Sbjct: 242 SKRPQLSQIM 251

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 47.3 bits (112), Expect = 9e-06
 Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 16/132 (12%)

Query: 1   MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M+F EG ++ D +   +  +  ++ V    + + + +  LH++G++  ++K  + +L   
Sbjct: 96  MEFLEGGALTDIVTHTRMNEEQIAAV---CLAVLKALSVLHAQGVIHRDIKSDSILLTHD 152

Query: 60  DRAVLGDVGIPHLLLGIPLPSSDLPRR---LGTPNYMAPEQWQPEVRGPISFETDSWGFA 116
            R  L D G    +      S ++PRR   +GTP +MAPE      R P   E D W   
Sbjct: 153 GRVKLSDFGFCAQV------SKEVPRRKSLVGTPYWMAPELIS---RLPYGPEVDIWSLG 203

Query: 117 CSIIEMLTGVQP 128
             +IEM+ G  P
Sbjct: 204 IMVIEMVDGEPP 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 46.8 bits (112), Expect = 9e-06
 Identities = 47/188 (25%), Positives = 78/188 (41%), Gaps = 28/188 (14%)

Query: 6   GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVL 64
           GS+ D +   K GK+    +   A  + +G+  LH+K  I+  ++KP N ++N      +
Sbjct: 84  GSLADLLK--KVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKI 141

Query: 65  GDVGIPHLLLGIPLPSSDLPRRL-------GTPNYMAPEQWQPEVRGPISFETDSWGFAC 117
            D GI          S  L   L       GT  YM+PE+ Q E     S+  D W    
Sbjct: 142 ADFGI----------SKVLENTLDQCNTFVGTVTYMSPERIQGE---SYSYAADIWSLGL 188

Query: 118 SIIEMLTGV---QPRCGRSVDEIYDAVVRRQEIPPIPSGL-PPAVENVLLGCFEYDLRSR 173
           +++E   G     P    S  E+  A+      P +P+    P   + +  C + D + R
Sbjct: 189 TLLECALGKFPFLPPGQPSFFELMQAIC-DGPPPSLPAEEFSPEFRDFISACLQKDPKKR 247

Query: 174 PLMTDILR 181
           P   ++L+
Sbjct: 248 PSAAELLQ 255

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 46.7 bits (111), Expect = 1e-05
 Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 12/164 (7%)

Query: 20  LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP 79
           L  S+    AI +A G+  L S   +  +L   N ++ E     + D G+   +      
Sbjct: 121 LDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIY----- 175

Query: 80  SSDLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
           S+D  R       + P +W P    + G  + E+D W F   + E+ + G+QP  G S  
Sbjct: 176 SADYYRVQS--KSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ 233

Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
           E+ + +  RQ + P P   P  V  +++ C+      RP   DI
Sbjct: 234 EVIEMIRSRQ-LLPCPEDCPARVYALMIECWNEIPARRPRFKDI 276

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 46.8 bits (111), Expect = 1e-05
 Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 19/176 (10%)

Query: 9   GDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE----ADRAV- 63
             R+ +     L+L  +    +D+A+G + L     +  +L   N +++E    ADR V 
Sbjct: 92  DARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVK 151

Query: 64  LGDVGIPHLLLGIPLPSSDLPRRLGTP----NYMAPEQWQPEVRGPISFETDSWGFACSI 119
           +GD G     L   +  SD  R+ G       +MAPE     + G  + ++D W F   +
Sbjct: 152 IGDFG-----LARDIYKSDYYRKEGEGLLPVRWMAPESL---LDGKFTTQSDVWSFGVLM 203

Query: 120 IEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
            E+LT G QP    +  E+   V     +   P   P  +  ++  C+  D   RP
Sbjct: 204 WEILTLGQQPYPALNNQEVLQHVTAGGRLQK-PENCPDKIYQLMTNCWAQDPSERP 258

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 46.7 bits (111), Expect = 1e-05
 Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 12/93 (12%)

Query: 39  LHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR---LGTPNYMAP 95
           LH++G++  ++K  + +L    R  L D G    +      S ++PRR   +GTP +MAP
Sbjct: 131 LHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQV------SKEVPRRKSLVGTPYWMAP 184

Query: 96  EQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
           E      R P   E D W     +IEM+ G  P
Sbjct: 185 EVIS---RLPYGTEVDIWSLGIMVIEMVDGEPP 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 46.4 bits (110), Expect = 1e-05
 Identities = 40/159 (25%), Positives = 63/159 (39%), Gaps = 23/159 (14%)

Query: 34  QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYM 93
           +G+  LH++GI+  ++K  N +++      + D GI   L      S         P+  
Sbjct: 117 KGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKL---EANSLSTKTNGARPSLQ 173

Query: 94  APEQWQ-PEVRGPISF--ETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI--- 147
               W  PEV    S+  + D W   C ++EMLTG  P         +    + Q I   
Sbjct: 174 GSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHP---------FPDCTQLQAIFKI 224

Query: 148 -----PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
                P IPS +     + L   FE D   RP   ++L+
Sbjct: 225 GENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 46.2 bits (109), Expect = 1e-05
 Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 15/132 (11%)

Query: 6   GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
           GSV D +   KG  L    +     ++ +G+  LH   ++  ++K  N +L E     L 
Sbjct: 94  GSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLV 153

Query: 66  DVGIPHLLLGIPLPSSDLPRR---LGTPNYMAPE----QWQPEVRGPISFETDSWGFACS 118
           D G+   L         + RR   +GTP +MAPE       P+      F++D W    +
Sbjct: 154 DFGVSAQL------DRTVGRRNTFIGTPYWMAPEVIACDENPD--ATYDFKSDLWSLGIT 205

Query: 119 IIEMLTGVQPRC 130
            IEM  G  P C
Sbjct: 206 AIEMAEGAPPLC 217

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 46.6 bits (110), Expect = 2e-05
 Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 7/121 (5%)

Query: 9   GDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV 67
           GD M  + +  KL   +   Y+ +++  +  LH +GI+  +LK  N +L+      L D 
Sbjct: 81  GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDY 140

Query: 68  GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ 127
           G+    L    P        GTPNY+APE  + E  G   F  D W     + EM+ G  
Sbjct: 141 GMCKEGL---RPGDTTSTFCGTPNYIAPEILRGEDYG---FSVDWWALGVLMFEMMAGRS 194

Query: 128 P 128
           P
Sbjct: 195 P 195

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 46.4 bits (110), Expect = 2e-05
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 9/151 (5%)

Query: 1   MKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M++  G  GD M Q+ +  K        YA ++   ++ LH  G++  +LK  N +L+  
Sbjct: 75  MEYVNG--GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAE 132

Query: 60  DRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
               L D G+     GI L         GTP+Y+APE  Q    GP     D W     +
Sbjct: 133 GHCKLADFGMCKE--GI-LNGVTTTTFCGTPDYIAPEILQELEYGP---SVDWWALGVLM 186

Query: 120 IEMLTGVQPRCGRSVDEIYDAVVRRQEIPPI 150
            EM+ G  P    + D+++++++    + P+
Sbjct: 187 YEMMAGQPPFEADNEDDLFESILHDDVLYPV 217

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 46.2 bits (110), Expect = 2e-05
 Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 14/175 (8%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG 75
             G  +L    + A ++A G+  L +K  +  +L   N ++ E     +GD G+   +  
Sbjct: 112 GLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIY- 170

Query: 76  IPLPSSDLPRRLGT---P-NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRC 130
                +D  R+ G    P  +MAPE  +    G  + ++D W F   + EM T   QP  
Sbjct: 171 ----ETDYYRKGGKGLLPVRWMAPESLKD---GVFTTKSDVWSFGVVLWEMATLAEQPYQ 223

Query: 131 GRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 185
           G S +E+   V+    +   P   P  +  ++  C++Y+ + RP   +I+   K 
Sbjct: 224 GLSNEEVLKFVIDGGHLDL-PENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 46.2 bits (109), Expect = 2e-05
 Identities = 41/170 (24%), Positives = 79/170 (46%), Gaps = 12/170 (7%)

Query: 18  GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP 77
           G+L LS +   A  +A G++ L S+  +  +L   N ++       +GD G+        
Sbjct: 118 GELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSR-----D 172

Query: 78  LPSSDLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGRS 133
           + S+D  R  G  + M P +W P    +    + E+D W F   + E+ T G QP    S
Sbjct: 173 VYSTDYYRVGG--HTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS 230

Query: 134 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 183
             E+ + + + + +   P   P  V +++LGC++ + + R  + +I ++ 
Sbjct: 231 NTEVIECITQGRVLER-PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKIL 279

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 46.4 bits (110), Expect = 3e-05
 Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 24/205 (11%)

Query: 39  LHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL-GTPNYMAPEQ 97
           +HSK ++  ++K  N +L       LGD G   +       S D+ R   GTP Y+APE 
Sbjct: 159 VHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATV--SDDVGRTFCGTPYYVAPEI 216

Query: 98  WQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA 157
           W+   R P S + D +     + E+LT  +P  G +++E+    +  +   P+P  + P 
Sbjct: 217 WR---RKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGR-YDPLPPSISPE 272

Query: 158 VENVLLGCFEYDLRSRP-----LMTDILRVFKSS-QNSVHSDGGWTGHGSRILPDKSSSG 211
           ++ ++      D + RP     L   I ++F S     V +  G++G     +  +    
Sbjct: 273 MQEIVTALLSSDPKRRPSSSKLLNMPICKLFISGLLEIVQTQPGFSGPLRDTISRQIQQ- 331

Query: 212 YTEWFLSKEDLKVDDVVRSRKPPNS 236
                 +K+ L+V+     R+    
Sbjct: 332 ------TKQLLQVE----RRRIVRQ 346

Length = 496

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 45.4 bits (107), Expect = 3e-05
 Identities = 42/181 (23%), Positives = 73/181 (40%), Gaps = 23/181 (12%)

Query: 9   GDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG 68
           G  +  LK G L  + +     ++ +G+  LHS+  +  ++K  N +L+E     L D G
Sbjct: 87  GSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFG 146

Query: 69  IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
           +   L    +  +     +GTP +MAPE  +   +    F+ D W    + IE+  G  P
Sbjct: 147 VAGQLTDTQIKRNTF---VGTPFWMAPEVIK---QSAYDFKADIWSLGITAIELAKGEPP 200

Query: 129 RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE--------NVLLGCFEYDLRSRPLMTDIL 180
                       +   + +  IP   PP +E          +  C   D R RP   ++L
Sbjct: 201 ---------NSDLHPMRVLFLIPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELL 251

Query: 181 R 181
           +
Sbjct: 252 K 252

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 45.1 bits (107), Expect = 3e-05
 Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 24/167 (14%)

Query: 17  GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI 76
           G  L ++++   A  +A+G+  L  +  +  +L   N ++ E     + D G        
Sbjct: 98  GQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFG-------- 149

Query: 77  PLPSSDLPRRLGTPNYMA-----PEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQ 127
                 L R +    Y++     P +W  PE    G  S ++D W F   + EM T G  
Sbjct: 150 ------LARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQV 203

Query: 128 PRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
           P  G +  E+YD +     +P  P+  P  +  ++L C+  +   RP
Sbjct: 204 PYPGMNNHEVYDQITAGYRMPC-PAKCPQEIYKIMLECWAAEPEDRP 249

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 45.0 bits (107), Expect = 3e-05
 Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 11/100 (11%)

Query: 34  QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR-----LG 88
           +G+  LHS G +  ++K  N +L E     + D G+   L        D  R+     +G
Sbjct: 113 KGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLA----DGGDRTRKVRKTFVG 168

Query: 89  TPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
           TP +MAPE  + +V G   F+ D W F  + IE+ TG  P
Sbjct: 169 TPCWMAPEVME-QVHG-YDFKADIWSFGITAIELATGAAP 206

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 45.0 bits (106), Expect = 4e-05
 Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 13/174 (7%)

Query: 5   EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
           +GS+ D +   +G  L L N+   A  +A G+  +     +  +L+  N ++ +     +
Sbjct: 84  KGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKI 143

Query: 65  GDVGIPHLLLGIPLPSSDLPRRLGTP---NYMAPEQWQPEVRGPISFETDSWGFACSIIE 121
            D G+  L+       ++   R G      + APE     + G  + ++D W F   + E
Sbjct: 144 ADFGLARLI-----EDNEYTARQGAKFPIKWTAPEA---ALYGRFTIKSDVWSFGILLTE 195

Query: 122 MLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
           ++T G  P  G +  E+ + V R   +P  P   P ++  ++L C++ D   RP
Sbjct: 196 LVTKGRVPYPGMNNREVLEQVERGYRMP-CPQDCPISLHELMLQCWKKDPEERP 248

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 45.9 bits (109), Expect = 4e-05
 Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 24/124 (19%)

Query: 19  KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN----------------EADRA 62
           K S+         +   I  +HSKG+L  +LKP N +L                 + +  
Sbjct: 109 KTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEE 168

Query: 63  VLGDVGIPHLLLGIPLPSSDLPRRL-GTPNYMAPEQWQPEVRG-PISFETDSWGFACSII 120
            L D+ +      I   S  +P ++ GTP+YMAPE+    + G P S  TD +     + 
Sbjct: 169 DLLDIDVD--ERNICYSSMTIPGKIVGTPDYMAPER----LLGVPASESTDIYALGVILY 222

Query: 121 EMLT 124
           +MLT
Sbjct: 223 QMLT 226

Length = 932

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 45.0 bits (106), Expect = 4e-05
 Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 7/104 (6%)

Query: 80  SSDLPRRLGTPNYMAPEQW-QPE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
           ++D  + +G  N + P +W  PE  + G  S ++D W +   + E+ + G+QP CG S  
Sbjct: 176 AADYYKLMG--NSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ 233

Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
           ++ + ++R +++ P P   P  V  ++L C+      RP   DI
Sbjct: 234 DVIE-MIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDI 276

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 45.2 bits (107), Expect = 4e-05
 Identities = 39/162 (24%), Positives = 58/162 (35%), Gaps = 13/162 (8%)

Query: 18  GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP 77
              + S V  Y  ++   +  LH  GI+  ++K  N +L+     VL D G+    L   
Sbjct: 100 EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLA-- 157

Query: 78  LPSSDLPRRL-GTPNYMAPEQWQPEVRGPI---SFETDSWGFACSIIEMLTGVQPRCGRS 133
               +      GT  YMAPE     +RG         D W       E+LTG  P     
Sbjct: 158 -EEEERAYSFCGTIEYMAPEV----IRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDG 212

Query: 134 VDEIYDAVVRR--QEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
                  + RR  +  PP P  +     + +    E D + R
Sbjct: 213 EQNSQSEISRRILKSKPPFPKTMSAEARDFIQKLLEKDPKKR 254

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 44.8 bits (106), Expect = 4e-05
 Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 34/196 (17%)

Query: 1   MKFYEG-SVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLH-SKGILVLNLKPFNFIL 56
           M   EG  +G+    LK    + +   ++   + +   +  LH  K I+  +L P N +L
Sbjct: 88  MDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIML 147

Query: 57  NEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFA 116
            E D+  + D G    L     P S L   +GT  Y  PE  + E   P   + D W F 
Sbjct: 148 GEDDKVTITDFG----LAKQKQPESKLTSVVGTILYSCPEIVKNE---PYGEKADVWAFG 200

Query: 117 CSIIEMLTGVQP---------RCGRSVDEIYDAVVRRQEIPPIPSGL-PPAVENVLLGCF 166
           C + +M T +QP            + V+ +Y+         P+P G+    V +V+  C 
Sbjct: 201 CILYQMCT-LQPPFYSTNMLSLATKIVEAVYE---------PLPEGMYSEDVTDVITSCL 250

Query: 167 EYDLRSRPLMTDILRV 182
             D  +RP   DI++V
Sbjct: 251 TPDAEARP---DIIQV 263

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 45.0 bits (106), Expect = 4e-05
 Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 10/114 (8%)

Query: 18  GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP 77
           G LS S +   + +  QG+  LHSKG +  ++K  N +L +     L D G+   +    
Sbjct: 101 GPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQI---- 156

Query: 78  LPSSDLPRR---LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
             ++ + +R   +GTP +MAPE    E +G  +   D W    + IE L  +QP
Sbjct: 157 --TATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIE-LAELQP 207

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 44.6 bits (105), Expect = 5e-05
 Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 15/179 (8%)

Query: 9   GDRMAQLKGGK--LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD 66
           GD ++ L+  K  L    + ++A+D A G+  L SK  +  +L   N ++ E +   + D
Sbjct: 77  GDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISD 136

Query: 67  VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQ-PEV--RGPISFETDSWGFACSIIEML 123
            G+          SS L +         P +W  PE    G  S E+D W +   + E  
Sbjct: 137 FGMSRQEDDGIYSSSGLKQ--------IPIKWTAPEALNYGRYSSESDVWSYGILLWETF 188

Query: 124 T-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
           + GV P  G +  +  + V +   +   P   P  V  V+  C++Y   +RP  +++ +
Sbjct: 189 SLGVCPYPGMTNQQAREQVEKGYRM-SCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK 246

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 44.6 bits (105), Expect = 5e-05
 Identities = 39/134 (29%), Positives = 55/134 (41%), Gaps = 9/134 (6%)

Query: 17  GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI 76
           G  +S+ NV  +   L +G+   H + IL  +LKP N ++NE     L D G   L    
Sbjct: 97  GNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFG---LARAK 153

Query: 77  PLPSSDLPRRLGTPNYMAPEQW--QPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV 134
            +P+      + T  Y  P+      E   PI    D WG  C + EM TG     G +V
Sbjct: 154 SVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPI----DMWGVGCILYEMATGRPMFPGSTV 209

Query: 135 DEIYDAVVRRQEIP 148
            E    + R    P
Sbjct: 210 KEELHLIFRLLGTP 223

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 44.2 bits (104), Expect = 7e-05
 Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 15/132 (11%)

Query: 6   GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
           GSV D +   KG  L    +     ++ +G+  LH+  ++  ++K  N +L E     L 
Sbjct: 104 GSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLV 163

Query: 66  DVGIPHLLLGIPLPSSDLPRR---LGTPNYMAPE----QWQPEVRGPISFETDSWGFACS 118
           D G+   L         + RR   +GTP +MAPE       P+      + +D W    +
Sbjct: 164 DFGVSAQL------DRTVGRRNTFIGTPYWMAPEVIACDENPD--ATYDYRSDIWSLGIT 215

Query: 119 IIEMLTGVQPRC 130
            IEM  G  P C
Sbjct: 216 AIEMAEGAPPLC 227

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 44.2 bits (104), Expect = 7e-05
 Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 12/166 (7%)

Query: 18  GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP 77
           G+L+L  +   A  +A G++ L S   +  +L   N ++ +     +GD G+        
Sbjct: 117 GQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSR-----D 171

Query: 78  LPSSDLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGRS 133
           + S+D  R  G    M P +W P    +    + E+D W F   + E+ T G QP    S
Sbjct: 172 IYSTDYYRVGG--RTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLS 229

Query: 134 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
             E  + + + +E+   P   PP V  ++ GC++ + + R ++ DI
Sbjct: 230 NTEAIECITQGRELER-PRTCPPEVYAIMQGCWQREPQQRMVIKDI 274

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 45.2 bits (107), Expect = 7e-05
 Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 15/128 (11%)

Query: 4   YEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLH---SKGILVLNLKPFNFILNEAD 60
           +E   G  ++++    LS     + AI +A+ +  LH   S  ++V NL P   I++  D
Sbjct: 762 HEYIEGKNLSEVLRN-LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKD 820

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
                    PHL L +P       +   +  Y+APE  +      I+ ++D +GF   +I
Sbjct: 821 E--------PHLRLSLPGLLCTDTKCFISSAYVAPETRE---TKDITEKSDIYGFGLILI 869

Query: 121 EMLTGVQP 128
           E+LTG  P
Sbjct: 870 ELLTGKSP 877

Length = 968

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 44.3 bits (105), Expect = 7e-05
 Identities = 42/158 (26%), Positives = 66/158 (41%), Gaps = 16/158 (10%)

Query: 43  GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV 102
           G++  ++KP N +L+ +    L D GI   L+     S    R  G   YMAPE+  P  
Sbjct: 135 GVIHRDVKPSNILLDASGNVKLCDFGISGRLVD----SKAKTRSAGCAAYMAPERIDPPD 190

Query: 103 RGP-ISFETDSWGFACSIIEMLTGVQPRCGRSVD-EIYDAVVRRQEIPPIPS---GLPPA 157
             P      D W    S++E+ TG  P      + E+   ++  QE PP      G  P 
Sbjct: 191 PNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKIL--QEEPPSLPPNEGFSPD 248

Query: 158 VENVLLGCFEYDLRSRP-----LMTDILRVFKSSQNSV 190
             + +  C   D R RP     L    +R +++++  V
Sbjct: 249 FCSFVDLCLTKDHRKRPKYRELLQHPFIRRYETAEVDV 286

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 44.2 bits (104), Expect = 9e-05
 Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 14/160 (8%)

Query: 18  GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP 77
           G  S   +  YA ++  G+  +H++ ++  +LKP N +L+E     + D+G     L   
Sbjct: 92  GVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLG-----LACD 146

Query: 78  LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSW-GFACSIIEMLTGVQP-RCGRSVD 135
                    +GT  YMAPE  Q   +G     +  W    C + ++L G  P R  ++ D
Sbjct: 147 FSKKKPHASVGTHGYMAPEVLQ---KGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 203

Query: 136 --EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
             EI D +     +  +P    P ++++L G  + D+  R
Sbjct: 204 KHEI-DRMTLTVNV-ELPDSFSPELKSLLEGLLQRDVSKR 241

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 44.0 bits (104), Expect = 1e-04
 Identities = 42/190 (22%), Positives = 78/190 (41%), Gaps = 25/190 (13%)

Query: 1   MKFYEGSVGDRMAQLKGGKLS---LSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN 57
           M++ EG  G     +K G ++   +S + R   ++   +  +H  G++  ++K  N ++ 
Sbjct: 81  MEYAEG--GSVRTLMKAGPIAEKYISVIIR---EVLVALKYIHKVGVIHRDIKAANILVT 135

Query: 58  EADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFET--DSWGF 115
                 L D G+  LL       S     +GTP +MAPE     +     ++T  D W  
Sbjct: 136 NTGNVKLCDFGVAALLNQNSSKRSTF---VGTPYWMAPEV----ITEGKYYDTKADIWSL 188

Query: 116 ACSIIEMLTGVQPRCG----RSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 171
             +I EM TG  P       R++  I  +   R E     +G    +   +  C + + +
Sbjct: 189 GITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLE----DNGYSKLLREFVAACLDEEPK 244

Query: 172 SRPLMTDILR 181
            R    ++L+
Sbjct: 245 ERLSAEELLK 254

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 43.9 bits (103), Expect = 1e-04
 Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 16/132 (12%)

Query: 1   MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M+F EG ++ D +   +  +  ++ V    + + + +  LH++G++  ++K  + +L   
Sbjct: 98  MEFLEGGALTDIVTHTRMNEEQIATV---CLSVLRALSYLHNQGVIHRDIKSDSILLTSD 154

Query: 60  DRAVLGDVGIPHLLLGIPLPSSDLPRR---LGTPNYMAPEQWQPEVRGPISFETDSWGFA 116
            R  L D G    +      S ++P+R   +GTP +MAPE      R P   E D W   
Sbjct: 155 GRIKLSDFGFCAQV------SKEVPKRKSLVGTPYWMAPEVIS---RLPYGTEVDIWSLG 205

Query: 117 CSIIEMLTGVQP 128
             +IEM+ G  P
Sbjct: 206 IMVIEMIDGEPP 217

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 44.0 bits (104), Expect = 1e-04
 Identities = 43/167 (25%), Positives = 81/167 (48%), Gaps = 12/167 (7%)

Query: 18  GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP 77
           G+L+LS + + A+ +A G++ L S+  +  +L   N ++       +GD G+        
Sbjct: 117 GELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSR-----D 171

Query: 78  LPSSDLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGRS 133
           + ++D  R  G    M P +W P    +    + E+D W F   + E+ T G QP  G S
Sbjct: 172 VYTTDYYRVGGHT--MLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLS 229

Query: 134 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
            +E+ + + + + +   P   P  V +++LGC++ D + R  + DI 
Sbjct: 230 NEEVIECITQGRLLQR-PRTCPSEVYDIMLGCWKRDPQQRINIKDIH 275

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 44.0 bits (104), Expect = 1e-04
 Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 11/114 (9%)

Query: 39  LHSKGILVLNLKPFNFILNEADRAVLGDVGI--PHLLLGIPLPSSDLPRRLGTPNYMAPE 96
           LH +GI+  +LKP N +L+      L D G+    +  G    +       GT  YMAPE
Sbjct: 116 LHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTF-----CGTIEYMAPE 170

Query: 97  QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR-RQEIPP 149
                  G      D W     + +MLTG  P    +  +  D +++ +  +PP
Sbjct: 171 ILMRSGHGK---AVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPP 221

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 43.8 bits (103), Expect = 1e-04
 Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 9/122 (7%)

Query: 17  GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI 76
           G  +++ NV  +   L +G+   H + +L  +LKP N ++NE     L D G   L    
Sbjct: 98  GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFG---LARAK 154

Query: 77  PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFET--DSWGFACSIIEMLTGVQPRCGRSV 134
            +P+      + T  Y  P+     + G   + T  D WG  C   EM TG     G +V
Sbjct: 155 SIPTKTYSNEVVTLWYRPPDI----LLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTV 210

Query: 135 DE 136
           +E
Sbjct: 211 EE 212

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 44.0 bits (104), Expect = 1e-04
 Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 6/101 (5%)

Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL 87
           Y+ +++  +  LH +GI+  +LK  N +L+      L D G+    +    P        
Sbjct: 101 YSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR---PGDTTSTFC 157

Query: 88  GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
           GTPNY+APE  + E  G   F  D W     + EM+ G  P
Sbjct: 158 GTPNYIAPEILRGEDYG---FSVDWWALGVLMFEMMAGRSP 195

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 43.6 bits (103), Expect = 1e-04
 Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 21/186 (11%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEA 59
           M+F +    DR+ + KGG + +  + + A+ + +G+  L++   I+  ++KP N ++N  
Sbjct: 82  MEFMDCGSLDRIYK-KGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSR 140

Query: 60  DRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
            +  L D G+   L+     +S     +GT  YM+PE+ Q    G  + ++D W    SI
Sbjct: 141 GQIKLCDFGVSGELI-----NSIADTFVGTSTYMSPERIQG---GKYTVKSDVWSLGISI 192

Query: 120 IEMLTGVQPRCGRSVDE--------IYDAVVR-RQEIPP-IPSG-LPPAVENVLLGCFEY 168
           IE+  G  P    ++D+        I D + +  QE PP +PS   P  + + +  C   
Sbjct: 193 IELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLK 252

Query: 169 DLRSRP 174
           D   RP
Sbjct: 253 DPTERP 258

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 43.5 bits (102), Expect = 1e-04
 Identities = 38/174 (21%), Positives = 80/174 (45%), Gaps = 13/174 (7%)

Query: 5   EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
           +GS+ D +   +GGK+ L  +  ++  +A+G+  +  K  +  +L+  N +++E+    +
Sbjct: 85  KGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKI 144

Query: 65  GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQ-PEV--RGPISFETDSWGFACSIIE 121
            D G+  +     +  ++   R G      P +W  PE    G  + ++D W F   + E
Sbjct: 145 ADFGLARV-----IEDNEYTAREGAK---FPIKWTAPEAINFGSFTIKSDVWSFGILLYE 196

Query: 122 MLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
           ++T G  P  G S  ++  A+ R   +P      P  + +++  C++     RP
Sbjct: 197 IVTYGKIPYPGMSNSDVMSALQRGYRMPR-MENCPDELYDIMKTCWKEKAEERP 249

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 43.9 bits (103), Expect = 1e-04
 Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 13/156 (8%)

Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL---LGIPLPSSDLP 84
           Y I LA  + ++HS+ ++  +LK  N  L       LGD G        + + + SS   
Sbjct: 176 YQIVLA--LDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASS--- 230

Query: 85  RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR 144
              GTP Y+APE W+   R   S + D W     + E+LT  +P  G S  EI   V+  
Sbjct: 231 -FCGTPYYLAPELWE---RKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVL-Y 285

Query: 145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
            +  P P  +   ++ +L      +   RP    +L
Sbjct: 286 GKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLL 321

Length = 478

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 43.0 bits (101), Expect = 2e-04
 Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 17/116 (14%)

Query: 18  GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP 77
           G  S + +  YA ++  G+  +H++ ++  +LKP N +L+E     + D+G+        
Sbjct: 92  GVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGL-------- 143

Query: 78  LPSSDLPRR-----LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
             + D  ++     +GT  YMAPE  Q  V    S   D +   C + ++L G  P
Sbjct: 144 --ACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSS--ADWFSLGCMLFKLLRGHSP 195

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 42.9 bits (101), Expect = 2e-04
 Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 10/103 (9%)

Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR- 86
           Y   +  G+  LH + I+  +LKP N +L+       G+V I  L L + L       + 
Sbjct: 102 YTAQIISGLEHLHQRRIIYRDLKPENVLLDND-----GNVRISDLGLAVELKDGQSKTKG 156

Query: 87  -LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
             GTP +MAPE  Q E      F  D +    ++ EM+    P
Sbjct: 157 YAGTPGFMAPELLQGE---EYDFSVDYFALGVTLYEMIAARGP 196

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 43.1 bits (101), Expect = 2e-04
 Identities = 53/207 (25%), Positives = 77/207 (37%), Gaps = 41/207 (19%)

Query: 1   MKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M+F  G  GD M  L K   L+      Y  +    I  +H  G +  ++KP N +L+  
Sbjct: 80  MEFLPG--GDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSK 137

Query: 60  DRAVLGDVGIPHLL-----------LGIPLPSS---------------DLPRR------L 87
               L D G+   L           L   LPS                   RR      +
Sbjct: 138 GHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTV 197

Query: 88  GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
           GTP+Y+APE +       +    D W     + EML G  P C  +  E Y  V+  +E 
Sbjct: 198 GTPDYIAPEVFMQTGYNKL---CDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKET 254

Query: 148 PPIPSGLP---PAVENVLLGCFEYDLR 171
              P  +P    A + +L  C E++ R
Sbjct: 255 LIFPPEVPISEKAKDLILRFCCEWEHR 281

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 43.1 bits (101), Expect = 2e-04
 Identities = 36/169 (21%), Positives = 78/169 (46%), Gaps = 13/169 (7%)

Query: 20  LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP-- 77
           L++ ++  Y+  +A+G+  L S+  +  +L   N +L+E +   + D G+   +   P  
Sbjct: 171 LTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY 230

Query: 78  --LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSV 134
               S+ LP +     +MAPE    +V    + ++D W F   + E+ + G  P  G  +
Sbjct: 231 VRKGSARLPLK-----WMAPESIFDKV---YTTQSDVWSFGVLLWEIFSLGASPYPGVQI 282

Query: 135 DEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 183
           +E +   ++       P    P +  ++L C++ D + RP  + ++ + 
Sbjct: 283 NEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVEIL 331

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 43.1 bits (101), Expect = 2e-04
 Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 4/135 (2%)

Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL 87
           Y  ++   I  +H    +  ++KP N +++      L D G    L+      S +   +
Sbjct: 107 YLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA--V 164

Query: 88  GTPNYMAPE--QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ 145
           GTP+Y++PE  Q   + +G    E D W     + EML G  P    S+ E Y  ++  +
Sbjct: 165 GTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK 224

Query: 146 EIPPIPSGLPPAVEN 160
           E    P+ +    E+
Sbjct: 225 ERFQFPAQVTDVSED 239

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 42.3 bits (100), Expect = 3e-04
 Identities = 48/159 (30%), Positives = 70/159 (44%), Gaps = 28/159 (17%)

Query: 29  AIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL 87
           A+ + +G+  LH K  I+  ++KP N ++N   +  L D G+          S  L   L
Sbjct: 106 AVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGV----------SGQLVNSL 155

Query: 88  -----GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP--RCGRSVDEIYD- 139
                GT +YMAPE+ Q       S   D W    S+IE+ TG  P        D I++ 
Sbjct: 156 AKTFVGTSSYMAPERIQGNDYSVKS---DIWSLGLSLIELATGRFPYPPENDPPDGIFEL 212

Query: 140 --AVVRRQEIPP-IPSG-LPPAVENVLLGCFEYDLRSRP 174
              +V   E PP +PSG   P  ++ +  C   D R RP
Sbjct: 213 LQYIV--NEPPPRLPSGKFSPDFQDFVNLCLIKDPRERP 249

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 42.5 bits (100), Expect = 3e-04
 Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 12/137 (8%)

Query: 44  ILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQ---P 100
           I+  ++KP N ++N   +  L D G+   L+     +S     +G  +YMAPE+ +   P
Sbjct: 124 IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLV-----ASLAKTNIGCQSYMAPERIKSGGP 178

Query: 101 EVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIY---DAVVRRQEIPPIPSGLPPA 157
                 + ++D W    SI+EM  G  P    +   I+    A+V   + P +PSG    
Sbjct: 179 NQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIV-DGDPPTLPSGYSDD 237

Query: 158 VENVLLGCFEYDLRSRP 174
            ++ +  C       RP
Sbjct: 238 AQDFVAKCLNKIPNRRP 254

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 42.5 bits (101), Expect = 3e-04
 Identities = 35/123 (28%), Positives = 46/123 (37%), Gaps = 31/123 (25%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL--L 73
           + G LS + +      L +G+   HS  IL  +LKP N ++N      L D G   L   
Sbjct: 91  RPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFG---LARA 147

Query: 74  LGIPLPSSDLPRRLGTPN-----YMAPE------QWQPEVRGPISFETDSWGFACSIIEM 122
            GIPL +        T       Y APE       +   V        D W   C   EM
Sbjct: 148 FGIPLRTY-------THEVVTLWYRAPEILLGSKHYSTAV--------DIWSVGCIFAEM 192

Query: 123 LTG 125
           +TG
Sbjct: 193 ITG 195

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 42.1 bits (100), Expect = 3e-04
 Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 20/134 (14%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG 75
              K + S +  Y   L +G+  LHS GIL  ++K  N ++N      L D G+      
Sbjct: 93  PEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPY-- 150

Query: 76  IPLPSSDLPRRLGTPNYMAPE------QWQPEVRGPISFETDSWGFACSIIEMLTGVQPR 129
               S+D   R+ T  Y  PE      ++ PEV        D W   C + E+  G    
Sbjct: 151 TKRNSADYTNRVITLWYRPPELLLGATRYGPEV--------DMWSVGCILAELFLGKPIF 202

Query: 130 CGRS----VDEIYD 139
            G +    +++I++
Sbjct: 203 QGSTELEQLEKIFE 216

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 42.4 bits (99), Expect = 3e-04
 Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 9/111 (8%)

Query: 18  GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP 77
           G L   NV  +   L +G+  +H + IL  +LKP N ++++     L D G+        
Sbjct: 98  GGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLAR---AKS 154

Query: 78  LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFET--DSWGFACSIIEMLTGV 126
           +PS      + T  Y  P+     + G   + T  D WG  C  +EM+ GV
Sbjct: 155 VPSHTYSNEVVTLWYRPPDV----LLGSTEYSTCLDMWGVGCIFVEMIQGV 201

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 42.1 bits (99), Expect = 3e-04
 Identities = 39/174 (22%), Positives = 75/174 (43%), Gaps = 12/174 (6%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG 75
           K  +L++  + + ++D A G+  L SK  +  +L   N ++ E +   + D G+     G
Sbjct: 86  KKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEG 145

Query: 76  IPLPSSDLPRRLGTPNYMAPEQWQ-PEV--RGPISFETDSWGFACSIIEMLT-GVQPRCG 131
                SD  +++       P +W  PE    G  + E+D W +   + E  + G  P  G
Sbjct: 146 GIYTVSDGLKQI-------PIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPG 198

Query: 132 RSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 185
            S  +  + +     +P  P   P  +  ++L C+ YD  +RP  ++I    + 
Sbjct: 199 MSNQQTRERIESGYRMPA-PQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 41.7 bits (98), Expect = 5e-04
 Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 15/127 (11%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           +K Y  + G R      G L  + V  +   L +GI   H   +L  +LKP N ++N+  
Sbjct: 84  LKKYMDTHGVR------GALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRG 137

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFET--DSWGFACS 118
              L D G+     GIP+  +     + T  Y AP+     + G  ++ T  D W   C 
Sbjct: 138 ELKLADFGLAR-AFGIPV--NTFSNEVVTLWYRAPDV----LLGSRTYSTSIDIWSVGCI 190

Query: 119 IIEMLTG 125
           + EM+TG
Sbjct: 191 MAEMITG 197

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 41.6 bits (97), Expect = 6e-04
 Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 15/165 (9%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIPHLLL 74
           K G++    + + +I + +G+  L  K  I+  ++KP N ++N      L D G+   L+
Sbjct: 96  KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 155

Query: 75  GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG---VQPRCG 131
                 S     +GT +YM+PE+ Q       S ++D W    S++EM  G   + P   
Sbjct: 156 -----DSMANSFVGTRSYMSPERLQGT---HYSVQSDIWSMGLSLVEMAIGRYPIPPPDA 207

Query: 132 RSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLM 176
           + ++ ++   V      P  S   P           Y   SRP M
Sbjct: 208 KELELMFGCPVEGD---PAESETSPRPRPPGRPLSSYGPDSRPPM 249

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 41.5 bits (98), Expect = 6e-04
 Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 24/117 (20%)

Query: 20  LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP 79
           L  + V  Y   L +G+  +H+ GI+  +LKP N +++      + D G+  L       
Sbjct: 96  LPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLF------ 149

Query: 80  SSDLPR----RLGTPNYMAPE------QWQPEVRGPISFETDSWGFACSIIEMLTGV 126
           S + PR    ++ T  Y APE      ++ P V        D W   C   E+L G 
Sbjct: 150 SEEEPRLYSHQVATRWYRAPELLYGARKYDPGV--------DLWAVGCIFAELLNGS 198

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 41.2 bits (96), Expect = 7e-04
 Identities = 41/186 (22%), Positives = 78/186 (41%), Gaps = 6/186 (3%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           M+  +G       + +G +L +  + +   + A G+  L SK  +  +L   N ++ E +
Sbjct: 72  MELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKN 131

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
              + D G+          S+   +++    + APE       G  S E+D W F   + 
Sbjct: 132 VLKISDFGMSREEEDGVYASTGGMKQIPV-KWTAPEALN---YGRYSSESDVWSFGILLW 187

Query: 121 EMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
           E  + G  P    S  +  +A+ +   +P  P   P AV  ++  C+EYD   RP  + +
Sbjct: 188 EAFSLGAVPYANLSNQQTREAIEQGVRLPC-PELCPDAVYRLMERCWEYDPGQRPSFSTV 246

Query: 180 LRVFKS 185
            +  +S
Sbjct: 247 HQELQS 252

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 41.2 bits (96), Expect = 8e-04
 Identities = 39/174 (22%), Positives = 72/174 (41%), Gaps = 13/174 (7%)

Query: 5   EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
           +GS+ D +    G  L L  +   A  +A G+  +     +  +L+  N ++ E     +
Sbjct: 84  KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKV 143

Query: 65  GDVGIPHLLLGIPLPSSDLPRRLGTP---NYMAPEQWQPEVRGPISFETDSWGFACSIIE 121
            D G+  L+       ++   R G      + APE     + G  + ++D W F   + E
Sbjct: 144 ADFGLARLI-----EDNEYTARQGAKFPIKWTAPEA---ALYGRFTIKSDVWSFGILLTE 195

Query: 122 MLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
           + T G  P  G    E+ D V R   +P  P   P ++ +++  C+  +   RP
Sbjct: 196 LTTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKEPEERP 248

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 41.1 bits (96), Expect = 0.001
 Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 8/146 (5%)

Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL 87
           Y  ++   +  LHS+ ++  ++K  N +L++     + D G+     GI    + +    
Sbjct: 100 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKE--GIS-DGATMKTFC 156

Query: 88  GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
           GTP Y+APE  +    G      D WG    + EM+ G  P   +  + +++ ++  +EI
Sbjct: 157 GTPEYLAPEVLEDNDYGR---AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL-MEEI 212

Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSR 173
              P  L P  +++L G  + D + R
Sbjct: 213 -RFPRTLSPEAKSLLAGLLKKDPKQR 237

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 40.8 bits (96), Expect = 0.001
 Identities = 38/143 (26%), Positives = 55/143 (38%), Gaps = 20/143 (13%)

Query: 20  LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP 79
           L  S +  Y   L QG+   HS GIL  +LKP N ++N      L D G+         P
Sbjct: 95  LPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRP 154

Query: 80  SSDLPRRLGTPNYMAPE------QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS 133
            +     + T  Y APE       +   V        D W   C   E+L+      G+S
Sbjct: 155 YTH---YVVTRWYRAPELLLGDKGYSTPV--------DIWSVGCIFAELLSRRPLFPGKS 203

Query: 134 -VDEIYDAVVRRQEIPPIPSGLP 155
            +D+++   + R    P P   P
Sbjct: 204 EIDQLFK--IFRTLGTPDPEVWP 224

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 41.2 bits (97), Expect = 0.001
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 3/68 (4%)

Query: 88  GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
           GTP+Y+APE +          E D W     + EML G  P C  +  E Y  ++  +E 
Sbjct: 201 GTPDYIAPEVFLQTGYNK---ECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKET 257

Query: 148 PPIPSGLP 155
              P  +P
Sbjct: 258 LQFPDEVP 265

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 41.2 bits (96), Expect = 0.001
 Identities = 49/191 (25%), Positives = 68/191 (35%), Gaps = 44/191 (23%)

Query: 1   MKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M+F  G  GD M  L K   LS      Y  +    I  +H  G +  ++KP N +L+  
Sbjct: 80  MEFLPG--GDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAK 137

Query: 60  DRAVLGDVGIPHLLLGIPL-------------PSSDLP----------------RR---- 86
               L D G   L  G+               P SD                  RR    
Sbjct: 138 GHVKLSDFG---LCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAY 194

Query: 87  --LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR 144
             +GTP+Y+APE +       +    D W     + EML G  P C  +  E Y  V+  
Sbjct: 195 STVGTPDYIAPEVFMQTGYNKL---CDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNW 251

Query: 145 QEIPPIPSGLP 155
           +E    P  +P
Sbjct: 252 KETLVFPPEVP 262

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 40.3 bits (95), Expect = 0.001
 Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 10/98 (10%)

Query: 34  QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYM 93
           +G+  LHS   +  ++K  N +LNE  +A L D G+   L       + +   +GTP +M
Sbjct: 110 KGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTV---IGTPFWM 166

Query: 94  APEQWQPEVRGPISFE--TDSWGFACSIIEMLTGVQPR 129
           A     PEV   I +    D W    + IEM  G  P 
Sbjct: 167 A-----PEVIQEIGYNNKADIWSLGITAIEMAEGKPPY 199

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 40.4 bits (94), Expect = 0.001
 Identities = 39/174 (22%), Positives = 75/174 (43%), Gaps = 13/174 (7%)

Query: 5   EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
           +GS+ D + +  G  L L  +   A  +A G+  +     +  +L+  N ++ +     +
Sbjct: 84  KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKI 143

Query: 65  GDVGIPHLLLGIPLPSSDLPRRLGTP---NYMAPEQWQPEVRGPISFETDSWGFACSIIE 121
            D G+  L+       ++   R G      + APE     + G  + ++D W F   + E
Sbjct: 144 ADFGLARLI-----EDNEYTARQGAKFPIKWTAPEA---ALYGRFTIKSDVWSFGILLTE 195

Query: 122 MLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
           ++T G  P  G    E+ + V R   +P  P G P ++  ++  C++ D   RP
Sbjct: 196 LVTKGRVPYPGMVNREVLEQVERGYRMP-CPQGCPESLHELMKLCWKKDPDERP 248

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 40.6 bits (95), Expect = 0.001
 Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 9/115 (7%)

Query: 12  MAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH 71
           M       + L  +  Y   L QG+   HS  +L  +LKP N ++N      L D G+  
Sbjct: 89  MDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 148

Query: 72  LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFET--DSWGFACSIIEMLT 124
              G+P+ +      + T  Y APE     + G   + T  D W   C   EM+T
Sbjct: 149 -AFGVPVRT--YTHEVVTLWYRAPEI----LLGCKYYSTAVDIWSLGCIFAEMVT 196

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 8/102 (7%)

Query: 27  RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR 86
           R A+ + +G+  L S  IL  ++KP N ++N   +  L D G+   L+     +S     
Sbjct: 99  RIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLV-----NSIAKTY 153

Query: 87  LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
           +GT  YMAPE+   E  G  S   D W    S +E+  G  P
Sbjct: 154 VGTNAYMAPERISGEQYGIHS---DVWSLGISFMELALGRFP 192

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 42/178 (23%), Positives = 76/178 (42%), Gaps = 15/178 (8%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           MK+  GS+ + +    G  L L  +   A  +A G+  L ++  +  +L   N ++ E +
Sbjct: 83  MKY--GSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENN 140

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQ-PEV--RGPISFETDSWGFAC 117
              + D G+  ++            R G      P +W  PE       S ++D W F  
Sbjct: 141 ICKVADFGLARVIK-----EDIYEAREGAK---FPIKWTAPEAALYNRFSIKSDVWSFGI 192

Query: 118 SIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
            + E++T G  P  G +  E+   V +   +P  P G P  + +++L C++ D   RP
Sbjct: 193 LLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPC-PPGCPKELYDIMLDCWKEDPDDRP 249

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 40.1 bits (93), Expect = 0.002
 Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 11/151 (7%)

Query: 34  QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYM 93
           Q +  LH+  ++  ++K  N +L       L D G       I    S     +GTP +M
Sbjct: 126 QALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFG---FCAQITPEQSKRSTMVGTPYWM 182

Query: 94  APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVVRRQEIPPI-- 150
           APE    +  GP   + D W      IEM+ G  P    + +  +Y  ++     P +  
Sbjct: 183 APEVVTRKAYGP---KVDIWSLGIMAIEMVEGEPPYLNENPLRALY--LIATNGTPELQN 237

Query: 151 PSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
           P  L P   + L  C E D+  R    ++L+
Sbjct: 238 PEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 40.0 bits (94), Expect = 0.002
 Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 18/145 (12%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
            ++ E ++ + +    GG L    V  Y   L Q I   HS  I+  ++KP N +++E+ 
Sbjct: 79  FEYVERTLLELLEASPGG-LPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESG 137

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPE------QWQPEVRGPISFETDSWG 114
              L D G    L     P+S L   + T  Y APE       +   V        D W 
Sbjct: 138 VLKLCDFGFARALRA--RPASPLTDYVATRWYRAPELLVGDTNYGKPV--------DVWA 187

Query: 115 FACSIIEMLTGVQPRCGRS-VDEIY 138
             C + E+L G     G S +D++Y
Sbjct: 188 IGCIMAELLDGEPLFPGDSDIDQLY 212

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 40.4 bits (94), Expect = 0.002
 Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 4/127 (3%)

Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL 87
           Y  ++   I  +H    +  ++KP N +L+      L D G    +       S +   +
Sbjct: 107 YIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVA--V 164

Query: 88  GTPNYMAPE--QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ 145
           GTP+Y++PE  Q   +  G    E D W     + EML G  P    S+ E Y  ++  +
Sbjct: 165 GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHE 224

Query: 146 EIPPIPS 152
           E    PS
Sbjct: 225 ERFQFPS 231

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 40.0 bits (93), Expect = 0.002
 Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 10/98 (10%)

Query: 34  QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR---LGTP 90
           QG+  LHSKG +  ++K  N +L +     L D G+   +      ++ + +R   +GTP
Sbjct: 117 QGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKI------TATIAKRKSFIGTP 170

Query: 91  NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
            +MAPE    E  G  +   D W    + IE L  +QP
Sbjct: 171 YWMAPEVAAVEKNGGYNQLCDIWAVGITAIE-LAELQP 207

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 40.1 bits (94), Expect = 0.002
 Identities = 39/172 (22%), Positives = 71/172 (41%), Gaps = 15/172 (8%)

Query: 20  LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA--DRAV-LGDVGIPHLLLGI 76
           L++ ++   A D+A+G   L     +  ++   N +L      R   + D G+   +   
Sbjct: 113 LTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYR- 171

Query: 77  PLPSSDLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGR 132
               +   R+ G    M P +W P    + G  + +TD W F   + E+ + G  P  GR
Sbjct: 172 ----ASYYRKGGRA--MLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGR 225

Query: 133 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
           +  E+ + V     + P P G P  V  ++  C+++    RP    IL   +
Sbjct: 226 TNQEVMEFVTGGGRLDP-PKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 40.0 bits (93), Expect = 0.002
 Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 10/125 (8%)

Query: 17  GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI 76
           G  +S+ NV  +   + +G+   H + +L  +LKP N ++NE     L D G   L    
Sbjct: 98  GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFG---LARAK 154

Query: 77  PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFET--DSWGFACSIIEMLTGVQPRCGRSV 134
            +P+      + T  Y  P+     + G   + T  D WG  C   EM +G     G +V
Sbjct: 155 SVPTKTYSNEVVTLWYRPPDV----LLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTV 210

Query: 135 -DEIY 138
            DE++
Sbjct: 211 EDELH 215

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 39.6 bits (92), Expect = 0.002
 Identities = 37/174 (21%), Positives = 80/174 (45%), Gaps = 13/174 (7%)

Query: 5   EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
           +GS+ D +   +G K  L  +  ++  +A+G+  +  +  +  +L+  N +++ +    +
Sbjct: 84  KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKI 143

Query: 65  GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQ-PEV--RGPISFETDSWGFACSIIE 121
            D G+  +     +  ++   R G      P +W  PE    G  + ++D W F   ++E
Sbjct: 144 ADFGLARV-----IEDNEYTAREGAK---FPIKWTAPEAINFGSFTIKSDVWSFGILLME 195

Query: 122 MLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
           ++T G  P  G S  E+  A+ R   +P   +  P  + N+++ C++     RP
Sbjct: 196 IVTYGRIPYPGMSNPEVIRALERGYRMPRPEN-CPEELYNIMMRCWKNRPEERP 248

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 39.5 bits (92), Expect = 0.002
 Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 27/189 (14%)

Query: 19  KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV-LGDVGIPHLLLGIP 77
           KL+L+ +  +A  + +G+  LHS+  +  +L   N +L + DR V +GD G     L   
Sbjct: 103 KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLL-DNDRLVKIGDFG-----LAKA 156

Query: 78  LPSSDLPRRLGTPNYMAPEQW-QPEV--RGPISFETDSWGFACSIIEMLTG--------- 125
           +P      R+   +  +P  W   E       S+ +D W F  ++ E+LT          
Sbjct: 157 VPEGHEYYRV-REDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPK 215

Query: 126 -----VQPRCGR-SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
                + P+ G+ +V  + + + R   + P P   P  V  ++  C+E + + RP    +
Sbjct: 216 KFEEMIGPKQGQMTVVRLIELLERGMRL-PCPKNCPQEVYILMKNCWETEAKFRPTFRSL 274

Query: 180 LRVFKSSQN 188
           + + K   +
Sbjct: 275 IPILKEMHH 283

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 39.6 bits (92), Expect = 0.003
 Identities = 37/117 (31%), Positives = 49/117 (41%), Gaps = 7/117 (5%)

Query: 12  MAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH 71
           M Q  GG L   NV  +   L +G+  +H + IL  +LKP N +++      L D G   
Sbjct: 93  MIQHPGG-LHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFG--- 148

Query: 72  LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
           L     +PS      + T  Y  P+          S   D WG  C  IEML G QP
Sbjct: 149 LARAKSIPSQTYSSEVVTLWYRPPDVLLGATD--YSSALDIWGAGCIFIEMLQG-QP 202

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 39.1 bits (91), Expect = 0.003
 Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 12/164 (7%)

Query: 20  LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP 79
           L L  + R+ ID+A G+  L SK  +  +L   N +LNE     + D G     L   + 
Sbjct: 110 LPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFG-----LSKKIY 164

Query: 80  SSDLPRRLGTPNYMAPEQW---QPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
           S D  R+ G  + + P +W   +       +  +D W F  ++ E++T G  P  G    
Sbjct: 165 SGDYYRQ-GCASKL-PVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS 222

Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
           EIY+ +++   +   P      V  ++  C+  + + RP    +
Sbjct: 223 EIYNYLIKGNRLKQ-PPDCLEDVYELMCQCWSPEPKCRPSFQHL 265

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 39.6 bits (92), Expect = 0.003
 Identities = 41/142 (28%), Positives = 59/142 (41%), Gaps = 16/142 (11%)

Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL 87
           Y+ ++   +  LH  GI+  ++K  N +L+     VL D G+    L     S +  R  
Sbjct: 110 YSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFL-----SEEKERTY 164

Query: 88  ---GTPNYMAPEQWQPEVRGPISF--ETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV 142
              GT  YMAPE     +RG        D W     I E+LTG  P            V 
Sbjct: 165 SFCGTIEYMAPEI----IRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVS 220

Query: 143 RR--QEIPPIPSGLPPAVENVL 162
           RR  +  PP PS + P  +++L
Sbjct: 221 RRILKCDPPFPSFIGPEAQDLL 242

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 39.3 bits (92), Expect = 0.003
 Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 23/131 (17%)

Query: 1   MKFYEG----SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL 56
           M++ EG    S+  ++ + +GG++    + + A  + +G+  LHS+ I+  ++KP N +L
Sbjct: 80  MEYCEGGSLDSIYKKVKK-RGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILL 138

Query: 57  NEADRAVLGDVGIPHLLLGIPLPSSDLPRRL-----GTPNYMAPEQWQPEVRGPISFETD 111
               +  L D G+          S +L   L     GT  YMAPE+ Q     P S  +D
Sbjct: 139 TRKGQVKLCDFGV----------SGELVNSLAGTFTGTSFYMAPERIQ---GKPYSITSD 185

Query: 112 SWGFACSIIEM 122
            W    +++E+
Sbjct: 186 VWSLGLTLLEV 196

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 39.3 bits (92), Expect = 0.003
 Identities = 35/122 (28%), Positives = 51/122 (41%), Gaps = 25/122 (20%)

Query: 40  HSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPE--- 96
           H    +  ++KP N ++ +  +  L D G   +L G   P  D    + T  Y APE   
Sbjct: 117 HKHNCIHRDVKPENILITKQGQIKLCDFGFARILTG---PGDDYTDYVATRWYRAPELLV 173

Query: 97  ---QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIY-------DAVVRRQ 145
              Q+ P V        D W   C   E+LTG     G+S VD++Y       D + R Q
Sbjct: 174 GDTQYGPPV--------DVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQ 225

Query: 146 EI 147
           +I
Sbjct: 226 QI 227

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 38.9 bits (91), Expect = 0.003
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 17/95 (17%)

Query: 92  YMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT-GVQPRCG-RSVDEIYDAVVRR 144
           +MAPE         I+F      +D W F   + E+L  GV+P  G ++ D I    +  
Sbjct: 174 WMAPES--------INFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVI--GRIEN 223

Query: 145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
            E  P+P   PP + +++  C+ YD   RP  T++
Sbjct: 224 GERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTEL 258

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 39.3 bits (91), Expect = 0.004
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 7/89 (7%)

Query: 34  QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYM 93
           QG+  LHS  ++  ++K  N +L+E     LGD G   ++     P++     +GTP +M
Sbjct: 126 QGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM----APANXF---VGTPYWM 178

Query: 94  APEQWQPEVRGPISFETDSWGFACSIIEM 122
           APE       G    + D W    + IE+
Sbjct: 179 APEVILAMDEGQYDGKVDVWSLGITCIEL 207

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 39.2 bits (91), Expect = 0.004
 Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 3/116 (2%)

Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL 87
           Y  ++   +  +HS G++  ++KP N +L++     L D G    +    +   D    +
Sbjct: 147 YTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTA--V 204

Query: 88  GTPNYMAPEQWQPE-VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV 142
           GTP+Y++PE  + +   G    E D W     + EML G  P    S+   Y  ++
Sbjct: 205 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIM 260

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 38.9 bits (91), Expect = 0.004
 Identities = 33/183 (18%), Positives = 69/183 (37%), Gaps = 23/183 (12%)

Query: 19  KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL 78
           +++L  +  ++  + +G+  L S+  +  +L   N ++   D   + D G+  +     L
Sbjct: 105 QINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKV-----L 159

Query: 79  PSSDLPRRLGTPNYMAPEQW-QPEV--RGPISFETDSWGFACSIIEMLTGVQP------- 128
           P       +  P   +P  W  PE       S  +D W F  ++ E+ T   P       
Sbjct: 160 PEDKDYYYVKEPG-ESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAE 218

Query: 129 -----RCGRSVDEIYDAVVRRQEIP--PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
                   +    +   +   +E    P P   P  V +++  C+E + + RP   D++ 
Sbjct: 219 FLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278

Query: 182 VFK 184
           +  
Sbjct: 279 IVD 281

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 38.8 bits (90), Expect = 0.004
 Identities = 37/169 (21%), Positives = 75/169 (44%), Gaps = 14/169 (8%)

Query: 21  SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS 80
           +L  + + A ++A G+  L++K  +  +L   N ++       +GD G+        +  
Sbjct: 117 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR-----DIYE 171

Query: 81  SDLPRRLGTP----NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
           +D  R+ G       +MAPE  +  V    S   D W F   + E+ +   QP  G S +
Sbjct: 172 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSS---DMWSFGVVLWEITSLAEQPYQGLSNE 228

Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
           ++   V+    +   P   P  V +++  C++++ + RP   +I+ + K
Sbjct: 229 QVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 276

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 39.0 bits (91), Expect = 0.004
 Identities = 38/155 (24%), Positives = 61/155 (39%), Gaps = 17/155 (10%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           +  YE    + MAQ             Y  +L   I  +H  G +  ++KP N +++   
Sbjct: 92  LNRYEDQFDEDMAQF------------YLAELVLAIHSVHQMGYVHRDIKPENVLIDRTG 139

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQP---EVRGPISFETDSWGFAC 117
              L D G    L    + +S LP  +GTP+Y+APE       + +G    E D W    
Sbjct: 140 HIKLADFGSAARLTANKMVNSKLP--VGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGV 197

Query: 118 SIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS 152
              EM+ G  P    +  + Y+ ++  Q     P 
Sbjct: 198 IAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPE 232

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	503
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.97
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.97
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.97
KOG0578	550	consensus p21-activated serine/threonine protein k	99.97
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.97
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.97
KOG0610	459	consensus Putative serine/threonine protein kinase	99.97
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.97
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.97
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.97
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.97
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.97
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.97
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.97
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.97
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.97
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.97
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.97
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.97
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.97
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.97
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.97
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.97
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.97
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.97
PHA02988	283	hypothetical protein; Provisional	99.97
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.97
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.97
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.97
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.97
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.97
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.97
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.97
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.97
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.97
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.97
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.97
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.97
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.97
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.97
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.96
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.96
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.96
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.96
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.96
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.96
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.96
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.96
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.96
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.96
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.96
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.96
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.96
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.96
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.96
KOG0589	426	consensus Serine/threonine protein kinase [General	99.96
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.96
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.96
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.96
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.96
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.96
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.96
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.96
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.96
PTZ00036	440	glycogen synthase kinase; Provisional	99.96
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.96
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.96
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.96
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.96
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.96
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.96
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.96
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.96
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.96
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.96
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.96
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.96
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.96
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.96
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.96
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.96
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.96
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.96
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.96
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.96
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.96
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.96
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.96
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.96
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.96
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.96
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.96
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.96
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.96
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.96
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.96
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.96
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.96
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.96
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.96
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.96
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.96
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.96
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.96
PTZ00283	496	serine/threonine protein kinase; Provisional	99.96
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.95
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.95
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.95
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.95
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.95
PTZ00267	478	NIMA-related protein kinase; Provisional	99.95
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.95
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.95
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.95
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.95
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.95
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.95
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.95
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.95
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.95
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.95
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.95
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.95
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.95
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.95
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.95
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.95
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.95
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.95
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.95
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.95
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.95
PTZ00284	467	protein kinase; Provisional	99.95
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.95
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.95
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.95
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.95
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.95
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.95
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.95
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.95
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.95
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.95
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.95
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.95
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.95
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.95
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.95
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.95
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.95
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.95
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.95
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.95
PHA03207	392	serine/threonine kinase US3; Provisional	99.95
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.95
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.95
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.95
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.95
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.95
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.95
PHA03212	391	serine/threonine kinase US3; Provisional	99.95
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.95
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.95
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.95
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.95
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.95
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.95
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.95
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.95
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.95
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.95
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.95
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.95
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.95
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.95
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.95
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.95
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.95
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.95
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.95
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.95
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.95
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.95
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.95
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.95
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.95
PHA02882	294	putative serine/threonine kinase; Provisional	99.95
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.95
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.95
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.95
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.95
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.95
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.95
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.95
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.95
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.95
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.95
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.95
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.95
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.95
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.95
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.95
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.95
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.95
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.95
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.94
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.94
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.94
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.94
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.94
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.94
PHA03209	357	serine/threonine kinase US3; Provisional	99.94
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.94
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.94
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.94
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.94
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.94
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.94
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.94
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.94
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.94
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.94
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.94
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.94
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.94
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.94
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.94
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.94
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.94
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.94
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.94
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.94
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.94
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.94
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.94
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.94
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.94
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.94
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.94
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.94
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.94
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.94
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.94
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.94
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.94
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.94
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.94
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.94
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.94
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.94
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.94
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.94
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.94
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.94
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.94
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.94
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.94
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.94
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.94
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.94
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.94
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.94
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.94
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.94
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.94
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.94
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.94
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.94
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.94
PHA03211	461	serine/threonine kinase US3; Provisional	99.94
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.94
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.94
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.94
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.94
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.94
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.94
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.94
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.94
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.94
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.94
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.94
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.94
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.94
KOG0584	632	consensus Serine/threonine protein kinase [General	99.94
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.94
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.94
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.94
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.94
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.94
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.94
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.94
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.94
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.94
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.94
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.94
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.94
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.94
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.94
PLN00009	294	cyclin-dependent kinase A; Provisional	99.93
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.93
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.93
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.93
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.93
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.93
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.93
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.93
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.93
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.93
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.93
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.93
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.93
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.93
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.93
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.93
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.93
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.93
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.93
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.93
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.93
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.93
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.93
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.93
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.93
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.93
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.93
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.93
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.93
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.93
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.93
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.93
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.93
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.93
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.93
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.93
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.93
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.93
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.93
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.93
PHA03210	501	serine/threonine kinase US3; Provisional	99.93
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.93
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.93
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.93
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.92
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.92
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.92
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.92
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.92
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.92
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.92
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.92
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.92
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.92
PLN00181	793	protein SPA1-RELATED; Provisional	99.92
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.92
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.92
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.92
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.91
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.91
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.91
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.91
KOG0586	596	consensus Serine/threonine protein kinase [General	99.9
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.9
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.9
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.9
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.89
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.89
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.89
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.89
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.89
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.88
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.88
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.88
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.88
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.87
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.87
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.87
KOG3653	534	consensus Transforming growth factor beta/activin	99.87
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.87
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.87
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.86
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.86
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.86
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.85
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.85
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.84
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.84
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.83
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.81
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.81
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.79
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.78
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.75
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.74
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.74
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.72
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.71
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.69
KOG1152	772	consensus Signal transduction serine/threonine kin	99.69
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.68
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.68
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.68
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.66
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.65
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.64
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.61
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.61
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.6
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.35
PRK09188	365	serine/threonine protein kinase; Provisional	99.32
PRK12274	218	serine/threonine protein kinase; Provisional	99.29
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.26
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.21
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.18
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.14
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.1
smart00090	237	RIO RIO-like kinase.	98.96
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.89
PRK10345	210	hypothetical protein; Provisional	98.85
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.83
PRK14879	211	serine/threonine protein kinase; Provisional	98.83
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.81
KOG1266	458	consensus Protein kinase [Signal transduction mech	98.78
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.77
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.73
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.7
COG4248	637	Uncharacterized protein with protein kinase and he	98.68
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.67
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.4
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.33
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.33
KOG3087	229	consensus Serine/threonine protein kinase [General	98.31
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.25
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.24
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.23
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.22
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.12
KOG1243	690	consensus Protein kinase [General function predict	97.97
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.87
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	97.75
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.73
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	97.62
PRK09902	216	hypothetical protein; Provisional	97.6
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	97.13
COG0478	304	RIO-like serine/threonine protein kinase fused to	96.94
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	96.82
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	96.55
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	95.91
COG0661	517	AarF Predicted unusual protein kinase [General fun	95.61
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	95.04
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	93.91
KOG1235	538	consensus Predicted unusual protein kinase [Genera	93.61
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	91.65
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	91.6
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	91.46
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	90.7
PRK05231	319	homoserine kinase; Provisional	90.62
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	90.19
KOG2268	465	consensus Serine/threonine protein kinase [Signal	89.99
PF01636	239	APH: Phosphotransferase enzyme family This family	89.98
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	89.89
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	88.68
PF02237	48	BPL_C: Biotin protein ligase C terminal domain; In	87.52
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	86.14
PRK10271	188	thiK thiamine kinase; Provisional	86.09
KOG0576	829	consensus Mitogen-activated protein kinase kinase	86.08
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	85.69
smart00743	61	Agenet Tudor-like domain present in plant sequence	85.56
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	85.48
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	85.02
PLN02236	344	choline kinase	84.74
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	84.74
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	84.54
COG2334	331	Putative homoserine kinase type II (protein kinase	83.65
PF15057	124	DUF4537: Domain of unknown function (DUF4537)	83.6
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	83.16
KOG1093	725	consensus Predicted protein kinase (contains TBC a	82.85
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	82.76
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	82.66

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=4.7e-35  Score=305.65  Aligned_cols=188  Identities=22%  Similarity=0.363  Sum_probs=168.1

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.++|.  +.+.|++..++.|+.||+.||+|||++|||||||||+|||+|.+++++|+|||.|+.+......
T Consensus       153 Le~A~nGdll~~i~--K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~  230 (604)
T KOG0592|consen  153 LEYAPNGDLLDLIK--KYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKS  230 (604)
T ss_pred             EEecCCCcHHHHHH--HhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhcc
Confidence            58888 79999997  5689999999999999999999999999999999999999999999999999999887543211


Q ss_pred             ----------CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC
Q 010713           80 ----------SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP  149 (503)
Q Consensus        80 ----------~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~  149 (503)
                                .....+++||..|.+||++...   ..++.+|+|+|||+||+|+.|.+||.+.+..-++++|+..  ...
T Consensus       231 ~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~---~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l--~y~  305 (604)
T KOG0592|consen  231 QENPVDPNQASSRRSSFVGTAEYVSPELLNDS---PAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQAL--DYE  305 (604)
T ss_pred             ccCccCcccccCcccceeeeecccCHHHhcCC---CCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHh--ccc
Confidence                      1112468999999999999844   6889999999999999999999999999999999999873  456


Q ss_pred             CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCCCCC
Q 010713          150 IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGHGS  201 (503)
Q Consensus       150 ~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~~~~  201 (503)
                      ++..+++.+.+||.++|..||.+|+++.+|.+      |+||.+++|..+.+
T Consensus       306 fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~------HpFF~~Vdw~nlw~  351 (604)
T KOG0592|consen  306 FPEGFPEDARDLIKKLLVRDPSDRLTSQQIKA------HPFFEGVDWENLWQ  351 (604)
T ss_pred             CCCCCCHHHHHHHHHHHccCccccccHHHHhh------CcccccCChhhhhh
Confidence            88999999999999999999999999999988      99999999999643

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=5.2e-35  Score=294.51  Aligned_cols=200  Identities=26%  Similarity=0.381  Sum_probs=175.6

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      +||+.| .|.-.|.  +.+.+++..+..|+.+|+.||.|||++||+||||||+|||+|.+|+++|+|||+++....   .
T Consensus       104 ld~~~GGeLf~hL~--~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~---~  178 (357)
T KOG0598|consen  104 LDYLNGGELFYHLQ--REGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK---D  178 (357)
T ss_pred             EeccCCccHHHHHH--hcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhccc---C
Confidence            478885 8888886  578999999999999999999999999999999999999999999999999999986543   2


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      .....+++||+.|||||++.+.   .|+..+|.||||+++|+|++|.+||.+.+..++++++.... .+..+..++.+.+
T Consensus       179 ~~~t~tfcGT~eYmAPEil~~~---gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k-~~~~p~~ls~~ar  254 (357)
T KOG0598|consen  179 GDATRTFCGTPEYMAPEILLGK---GYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK-LPLPPGYLSEEAR  254 (357)
T ss_pred             CCccccccCCccccChHHHhcC---CCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc-CCCCCccCCHHHH
Confidence            3344568999999999999855   79999999999999999999999999999999999998754 3445566999999


Q ss_pred             HHHHHhhhcCCCCCC----CHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCCccc
Q 010713          160 NVLLGCFEYDLRSRP----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGYTEW  215 (503)
Q Consensus       160 ~LI~~cL~~DP~~RP----S~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~~~~  215 (503)
                      ++++++|..||++|.    ++.+|.+      |++|.+++|..+..+.+.||..|.....
T Consensus       255 dll~~LL~rdp~~RLg~~~d~~~ik~------HpfF~~inW~~l~~k~l~PpF~P~~~~~  308 (357)
T KOG0598|consen  255 DLLKKLLKRDPRQRLGGPGDAEEIKR------HPFFKGINWEKLLAKKLSPPFKPNVTGL  308 (357)
T ss_pred             HHHHHHhccCHHHhcCCCCChHHhhc------CcccccCCHHHHHhcCCCCCeecCCCCc
Confidence            999999999999996    5666555      9999999999999999999988875433

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=9.2e-35  Score=292.84  Aligned_cols=170  Identities=26%  Similarity=0.487  Sum_probs=152.9

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecccCCCcEEEccCCcEEEEecCCcccccCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs-~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~   78 (503)
                      ||||+ |||.+++.  ..+++++....+++.++++||.|||+ ++||||||||+|||++..|++||||||.+..+..   
T Consensus       157 mEYMDgGSLd~~~k--~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvn---  231 (364)
T KOG0581|consen  157 MEYMDGGSLDDILK--RVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVN---  231 (364)
T ss_pred             hhhcCCCCHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhh---
Confidence            89999 59999997  34889999999999999999999995 8999999999999999999999999999987754   


Q ss_pred             CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCC-----ChHHHHHHHHhccCCCCCCCC
Q 010713           79 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR-----SVDEIYDAVVRRQEIPPIPSG  153 (503)
Q Consensus        79 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~-----~~~e~~~~i~~~~~~~~~~~~  153 (503)
                        ....++.||..|||||.+.+.   .|+.++||||||++++|+++|+.||...     ...+++..|+.. .+|..|..
T Consensus       232 --S~a~tfvGT~~YMsPERi~g~---~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~-ppP~lP~~  305 (364)
T KOG0581|consen  232 --SIANTFVGTSAYMSPERISGE---SYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDE-PPPRLPEG  305 (364)
T ss_pred             --hhcccccccccccChhhhcCC---cCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcC-CCCCCCcc
Confidence              255788999999999999966   7899999999999999999999999874     566777777653 56667776


Q ss_pred             -CcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          154 -LPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       154 -~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                       +++++++||..||++||.+||++.++++
T Consensus       306 ~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~  334 (364)
T KOG0581|consen  306 EFSPEFRSFVSCCLRKDPSERPSAKQLLQ  334 (364)
T ss_pred             cCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence             9999999999999999999999999998

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=3.3e-34  Score=281.10  Aligned_cols=192  Identities=24%  Similarity=0.370  Sum_probs=174.7

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| .|..+++  +.+++++..++.|+.||+.||+|||+++|++|||||+|||+|.+|++||+|||+|+....    
T Consensus       123 meyv~GGElFS~Lr--k~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~----  196 (355)
T KOG0616|consen  123 MEYVPGGELFSYLR--KSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG----  196 (355)
T ss_pred             EeccCCccHHHHHH--hcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecC----
Confidence            899995 8999997  678999999999999999999999999999999999999999999999999999988743    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                        ...+.||||.|+|||.++..   +|+.++|.||||+++|||+.|.+||.+.++.+++++|+...  ..+|..++++++
T Consensus       197 --rT~TlCGTPeYLAPEii~sk---~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~--v~fP~~fs~~~k  269 (355)
T KOG0616|consen  197 --RTWTLCGTPEYLAPEIIQSK---GYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGK--VKFPSYFSSDAK  269 (355)
T ss_pred             --cEEEecCCccccChHHhhcC---CCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCc--ccCCcccCHHHH
Confidence              34578999999999999855   78999999999999999999999999999999999998854  568899999999


Q ss_pred             HHHHHhhhcCCCCCC-----CHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG  211 (503)
Q Consensus       160 ~LI~~cL~~DP~~RP-----S~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~  211 (503)
                      +||.++|+.|-.+|.     ...+|..      |+||.+.+|..+.++.+++|..|.
T Consensus       270 dLl~~LL~vD~t~R~gnlknG~~dIk~------H~wF~~v~W~~i~~r~ie~P~~pp  320 (355)
T KOG0616|consen  270 DLLKKLLQVDLTKRFGNLKNGVEDIKN------HPWFKGVDWEAILQRKIEPPFEPP  320 (355)
T ss_pred             HHHHHHHhhhhHhhhcCcCCCcccccc------CcccccccHHHHhhccccCCCCCc
Confidence            999999999999993     4455655      899999999999999999999883

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=6.2e-33  Score=288.20  Aligned_cols=193  Identities=27%  Similarity=0.418  Sum_probs=171.7

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecccCCCcEEEccCC-cEEEEecCCcccccCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG-ILVLNLKPFNFILNEAD-RAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~g-IvHrDLKP~NILld~~~-~vKL~DFGla~~~~~~~   77 (503)
                      |||++ |+|.+++....+..++...+++++.||+.|++|||+++ ||||||||+|||++.++ ++||+|||+++......
T Consensus       119 tEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~  198 (362)
T KOG0192|consen  119 TEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK  198 (362)
T ss_pred             EEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc
Confidence            79999 69999998644788999999999999999999999999 99999999999999997 99999999997764321


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHH
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA  157 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~  157 (503)
                         .......||+.|||||++.+. ...|+.++||||||+++|||+||+.||.+....+....+.....++.++..+++.
T Consensus       199 ---~~~~~~~GT~~wMAPEv~~~~-~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~  274 (362)
T KOG0192|consen  199 ---TSMTSVAGTYRWMAPEVLRGE-KSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPH  274 (362)
T ss_pred             ---ccccCCCCCccccChhhhcCC-CCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHH
Confidence               333447899999999999854 4479999999999999999999999999999888888888888999999999999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCC
Q 010713          158 VENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWT  197 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~  197 (503)
                      +..||.+||..||..||++.+++..|+.+.........+.
T Consensus       275 l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~~~~~~  314 (362)
T KOG0192|consen  275 LSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISSAGPED  314 (362)
T ss_pred             HHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcccCccc
Confidence            9999999999999999999999999999887666544443

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.2e-33  Score=294.19  Aligned_cols=176  Identities=26%  Similarity=0.439  Sum_probs=160.0

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      +|+|. |+|..+++  +.+.+++.+++.+++||+.||.|||+++|+|||||..|+|++++.++||+|||+|.....   +
T Consensus        97 LELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~---~  171 (592)
T KOG0575|consen   97 LELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEY---D  171 (592)
T ss_pred             EEecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecC---c
Confidence            48898 79998887  678899999999999999999999999999999999999999999999999999988754   2


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      .....+.||||.|+|||++...   .+++.+||||+||+||.||+|++||...+..+++.++....  ..+|..++.+.+
T Consensus       172 ~Erk~TlCGTPNYIAPEVl~k~---gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~--Y~~P~~ls~~A~  246 (592)
T KOG0575|consen  172 GERKKTLCGTPNYIAPEVLNKS---GHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNE--YSMPSHLSAEAK  246 (592)
T ss_pred             ccccceecCCCcccChhHhccC---CCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcC--cccccccCHHHH
Confidence            3556688999999999999844   68999999999999999999999999999999999997744  446779999999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          160 NVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      +||.++|+.||.+|||+++++.      ++||.
T Consensus       247 dLI~~lL~~~P~~Rpsl~~vL~------h~Ff~  273 (592)
T KOG0575|consen  247 DLIRKLLRPNPSERPSLDEVLD------HPFFK  273 (592)
T ss_pred             HHHHHHhcCCcccCCCHHHHhc------CHhhh
Confidence            9999999999999999999999      77774

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=7.3e-33  Score=289.28  Aligned_cols=198  Identities=22%  Similarity=0.374  Sum_probs=168.7

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCC--
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP--   77 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~--   77 (503)
                      |||++| ++..+|.  +.+.|+++.+..|+.+++.||+.||+.|+|||||||+|+|||..|++||+|||++..+....  
T Consensus       220 MEylPGGD~mTLL~--~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~  297 (550)
T KOG0605|consen  220 MEYLPGGDMMTLLM--RKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRI  297 (550)
T ss_pred             EEecCCccHHHHHH--hcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhh
Confidence            899995 8888887  67899999999999999999999999999999999999999999999999999985432100  


Q ss_pred             --------------------CCC----C------------------CCCCccCCCCCCCccccCCCCCCCCCCccchHHH
Q 010713           78 --------------------LPS----S------------------DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGF  115 (503)
Q Consensus        78 --------------------~~~----~------------------~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSL  115 (503)
                                          .+.    .                  ...+.+|||.|||||++.+.   .|+..+|.|||
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~k---gY~~~cDwWSL  374 (550)
T KOG0605|consen  298 ESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGK---GYGKECDWWSL  374 (550)
T ss_pred             hhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcC---CCCccccHHHH
Confidence                                000    0                  01134799999999999965   58999999999


Q ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCC--CCCcHHHHHHHHHhhhcCCCCCCC---HHHHHHHHHhhccCc
Q 010713          116 ACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDLRSRPL---MTDILRVFKSSQNSV  190 (503)
Q Consensus       116 GviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~--~~~s~~l~~LI~~cL~~DP~~RPS---~~elL~~L~~i~~~~  190 (503)
                      |||+||||.|.+||.+.++.+.+.++........+|  ..++++.++||.+||. ||++|..   +.||.+      |+|
T Consensus       375 G~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~------HPf  447 (550)
T KOG0605|consen  375 GCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKK------HPF  447 (550)
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhc------CCc
Confidence            999999999999999999999999999877655555  5678999999999999 9999974   777766      999


Q ss_pred             CCCCCCCCCCCcCCCCCCCCCC
Q 010713          191 HSDGGWTGHGSRILPDKSSSGY  212 (503)
Q Consensus       191 ~~~~~w~~~~~~~~~~p~~~~~  212 (503)
                      |.+++|..+  +..++|..|..
T Consensus       448 F~~v~W~~l--~~~~apfvP~v  467 (550)
T KOG0605|consen  448 FKGVDWDHL--REMPAPFVPQV  467 (550)
T ss_pred             cccCCcchh--hcCCCCCCCCC
Confidence            999999998  45557777663

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-33  Score=301.05  Aligned_cols=196  Identities=22%  Similarity=0.359  Sum_probs=175.4

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||+.|.  |++.....+.+++..+..|+..++.||+|||++||||||||.+|||+|.+|++||+|||+++....   ..
T Consensus       448 mey~~Gg--dm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~---~g  522 (694)
T KOG0694|consen  448 MEYVAGG--DLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMG---QG  522 (694)
T ss_pred             EEecCCC--cEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCC---CC
Confidence            8999973  333333568999999999999999999999999999999999999999999999999999987543   24


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHHH
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVEN  160 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~~  160 (503)
                      ....+++|||.|||||++.+.   .|+.++|.||||++|||||.|+.||.+++.+++++.|+.  ..+.+|..++.+..+
T Consensus       523 ~~TsTfCGTpey~aPEil~e~---~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~--d~~~yP~~ls~ea~~  597 (694)
T KOG0694|consen  523 DRTSTFCGTPEFLAPEVLTEQ---SYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVN--DEVRYPRFLSKEAIA  597 (694)
T ss_pred             CccccccCChhhcChhhhccC---cccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhc--CCCCCCCcccHHHHH
Confidence            456789999999999999865   799999999999999999999999999999999999987  566788999999999


Q ss_pred             HHHHhhhcCCCCCCC-----HHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCC
Q 010713          161 VLLGCFEYDLRSRPL-----MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGY  212 (503)
Q Consensus       161 LI~~cL~~DP~~RPS-----~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~  212 (503)
                      +++++|..+|++|..     +.+|.+      ++||..++|..+.++..+||+.|..
T Consensus       598 il~~ll~k~p~kRLG~~e~d~~~i~~------hpFFr~i~w~~L~~r~i~PPf~P~i  648 (694)
T KOG0694|consen  598 IMRRLLRKNPEKRLGSGERDAEDIKK------HPFFRSIDWDDLLNRRIKPPFVPTI  648 (694)
T ss_pred             HHHHHhccCcccccCCCCCCchhhhh------CCccccCCHHHHhhccCCCCCCccc
Confidence            999999999999985     466666      9999999999999999999988863

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-33  Score=284.24  Aligned_cols=178  Identities=33%  Similarity=0.535  Sum_probs=151.3

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEcc-CCcEEEEecCCcccccCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE-ADRAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~-~~~vKL~DFGla~~~~~~~~   78 (503)
                      |||+. |||.+++....+ .|++..+.+++.||++||+|||++||+||||||+|||++. ++.+||+|||++........
T Consensus        95 mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~  173 (313)
T KOG0198|consen   95 MEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT  173 (313)
T ss_pred             eeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccccc
Confidence            89999 599999986444 8999999999999999999999999999999999999999 79999999999987653122


Q ss_pred             CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCC-CChHHHHHHHHhccCCCCCCCCCcHH
Q 010713           79 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVRRQEIPPIPSGLPPA  157 (503)
Q Consensus        79 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~-~~~~e~~~~i~~~~~~~~~~~~~s~~  157 (503)
                      .........||+.|||||++...  ....+++|||||||++.||+||..||.. ....+....+......|.+|..++.+
T Consensus       174 ~~~~~~~~~Gtp~~maPEvi~~g--~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~  251 (313)
T KOG0198|consen  174 KSDSELSVQGTPNYMAPEVIRNG--EVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDE  251 (313)
T ss_pred             cccccccccCCccccCchhhcCC--CcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHH
Confidence            22334467899999999999841  1223589999999999999999999987 44455555555555677899999999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          158 VENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      .++||.+|+..||++|||+.++|+
T Consensus       252 a~~Fl~~C~~~~p~~Rpta~eLL~  275 (313)
T KOG0198|consen  252 AKDFLRKCFKRDPEKRPTAEELLE  275 (313)
T ss_pred             HHHHHHHHhhcCcccCcCHHHHhh
Confidence            999999999999999999999999

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.7e-33  Score=272.06  Aligned_cols=178  Identities=22%  Similarity=0.469  Sum_probs=156.4

Q ss_pred             CcCCC-CCHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHH--CC--CeecccCCCcEEEccCCcEEEEecCCcccc
Q 010713            1 MKFYE-GSVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHS--KG--ILVLNLKPFNFILNEADRAVLGDVGIPHLL   73 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~--~~~Ls~~~vl~i~~QIl~aL~yLHs--~g--IvHrDLKP~NILld~~~~vKL~DFGla~~~   73 (503)
                      ||||+ |+|.+.+.+.+  +..+++..+++++.|++.||.++|+  ..  |+||||||.||+++.+|.+||+|||+++.+
T Consensus        99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l  178 (375)
T KOG0591|consen   99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL  178 (375)
T ss_pred             HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence            89999 79999998764  5679999999999999999999999  44  999999999999999999999999999987


Q ss_pred             cCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCC-C
Q 010713           74 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP-S  152 (503)
Q Consensus        74 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~-~  152 (503)
                      ...   ..-..+.+|||.||+||.+...   +|++++||||+||++|||+.-++||.+.+..++..+|.++ ..+++| .
T Consensus       179 ~s~---~tfA~S~VGTPyYMSPE~i~~~---~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qg-d~~~~p~~  251 (375)
T KOG0591|consen  179 SSK---TTFAHSLVGTPYYMSPERIHES---GYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQG-DYPPLPDE  251 (375)
T ss_pred             cch---hHHHHhhcCCCcccCHHHHhcC---CCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcC-CCCCCcHH
Confidence            542   2234578999999999999854   7999999999999999999999999999888888888765 556666 7


Q ss_pred             CCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHh
Q 010713          153 GLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  185 (503)
Q Consensus       153 ~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~  185 (503)
                      .+|.++..||..|+..||+.||+...++..++.
T Consensus       252 ~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~  284 (375)
T KOG0591|consen  252 HYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS  284 (375)
T ss_pred             HhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence            899999999999999999999996666665554

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.9e-34  Score=289.39  Aligned_cols=183  Identities=20%  Similarity=0.293  Sum_probs=157.4

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC---CcEEEEecCCcccccCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA---DRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~---~~vKL~DFGla~~~~~~   76 (503)
                      |||++| +|.|.+.  .++.+.+.....+++||+.|+.|||++||+||||||+|||+..+   ..+||+|||+|+.... 
T Consensus       255 lE~v~GGeLfd~vv--~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~-  331 (475)
T KOG0615|consen  255 LEYVEGGELFDKVV--ANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGE-  331 (475)
T ss_pred             EEEecCccHHHHHH--hccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhcccc-
Confidence            799995 9999997  67889999999999999999999999999999999999999766   6799999999988753 


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhccCC--CCCCCC
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE-IYDAVVRRQEI--PPIPSG  153 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e-~~~~i~~~~~~--~~~~~~  153 (503)
                         ...+.+.||||.|.|||++.+.....+..++|+|||||+||-+++|.+||.+..... ..+++..+...  ++....
T Consensus       332 ---~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~  408 (475)
T KOG0615|consen  332 ---GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDR  408 (475)
T ss_pred             ---ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhh
Confidence               456678999999999999986644445568999999999999999999999876665 66666654432  334577


Q ss_pred             CcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCC
Q 010713          154 LPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGG  195 (503)
Q Consensus       154 ~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~  195 (503)
                      ++.+..+||.+||..||++|||+.|+|+      |+|+....
T Consensus       409 Iseea~dlI~~mL~VdP~~R~s~~eaL~------hpW~~~~~  444 (475)
T KOG0615|consen  409 ISEEALDLINWMLVVDPENRPSADEALN------HPWFKDAP  444 (475)
T ss_pred             hhHHHHHHHHHhhEeCcccCcCHHHHhc------Chhhhccc
Confidence            8999999999999999999999999999      88887654

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.97  E-value=1.2e-31  Score=273.68  Aligned_cols=194  Identities=19%  Similarity=0.342  Sum_probs=164.9

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.  ....+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....   .
T Consensus        74 ~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~---~  148 (323)
T cd05571          74 MEYANGGELFFHLS--RERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGIS---D  148 (323)
T ss_pred             EeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCccccc---C
Confidence            799985 8988886  456799999999999999999999999999999999999999999999999999865322   1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.+.......+...  ...++..+++++.
T Consensus       149 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~--~~~~p~~~~~~~~  223 (323)
T cd05571         149 GATMKTFCGTPEYLAPEVLEDN---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME--EIRFPRTLSPEAK  223 (323)
T ss_pred             CCcccceecCccccChhhhcCC---CCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHH
Confidence            2223456799999999999754   6789999999999999999999999988877777666543  4456788999999


Q ss_pred             HHHHHhhhcCCCCCC-----CHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSS  210 (503)
Q Consensus       160 ~LI~~cL~~DP~~RP-----S~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~  210 (503)
                      +||.+||+.||++||     ++.++++      ++|+...+|.........+|..+
T Consensus       224 ~li~~~L~~dP~~R~~~~~~~~~~ll~------h~~f~~~~~~~~~~~~~~~~~~~  273 (323)
T cd05571         224 SLLAGLLKKDPKQRLGGGPEDAKEIME------HRFFASINWQDVVQKKLEPPFKP  273 (323)
T ss_pred             HHHHHHccCCHHHcCCCCCCCHHHHHc------CCCcCCCCHHHHHhCCCCCCcCC
Confidence            999999999999999     7999987      99999999988776666655444

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=4.2e-31  Score=275.94  Aligned_cols=178  Identities=24%  Similarity=0.359  Sum_probs=157.7

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC-CcEEEEecCCcccccCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA-DRAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~-~~vKL~DFGla~~~~~~~~   78 (503)
                      ||||.| +|++++..  .+++++.++.++++||+.|++|||++||+||||||+|||++.+ +++||+|||++....   .
T Consensus        99 mEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~---~  173 (370)
T KOG0583|consen   99 MEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP---G  173 (370)
T ss_pred             EEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccC---C
Confidence            899995 99999974  7889999999999999999999999999999999999999999 999999999998763   1


Q ss_pred             CCCCCCCccCCCCCCCccccCCCCCCCC-CCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCC-cH
Q 010713           79 PSSDLPRRLGTPNYMAPEQWQPEVRGPI-SFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGL-PP  156 (503)
Q Consensus        79 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~-s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~-s~  156 (503)
                      ......+.+||+.|+|||++.+..  .| ..++||||+|++||.|++|..||.+.+...++..+..  ....+|..+ ++
T Consensus       174 ~~~~l~t~cGsp~Y~aPEvl~~~~--~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~--~~~~~p~~~~S~  249 (370)
T KOG0583|consen  174 EDGLLKTFCGSPAYAAPEVLSGKG--TYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRK--GEFKIPSYLLSP  249 (370)
T ss_pred             CCCcccCCCCCcccCCHHHhCCCC--CcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhc--CCccCCCCcCCH
Confidence            244567889999999999998652  14 4889999999999999999999999888888888654  445677777 99


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          157 AVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      +++.|+.+||..||.+|+++.++++      ++|+..
T Consensus       250 ~~~~Li~~mL~~~P~~R~t~~~i~~------h~w~~~  280 (370)
T KOG0583|consen  250 EARSLIEKMLVPDPSTRITLLEILE------HPWFQK  280 (370)
T ss_pred             HHHHHHHHHcCCCcccCCCHHHHhh------Chhhcc
Confidence            9999999999999999999999997      777664

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.97  E-value=2.4e-31  Score=266.18  Aligned_cols=198  Identities=19%  Similarity=0.333  Sum_probs=163.1

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.......+++.++..++.|++.||+|||+++|+||||||+|||++.++.++|+|||++.....    
T Consensus        79 ~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~----  154 (285)
T cd05631          79 LTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPE----  154 (285)
T ss_pred             EEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCC----
Confidence            68898 5898888654556799999999999999999999999999999999999999999999999999876532    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh--ccCCCCCCCCCcHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR--RQEIPPIPSGLPPA  157 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~--~~~~~~~~~~~s~~  157 (503)
                      ........|+..|+|||++.+.   .++.++|||||||++|+|++|+.||...........+..  ......++..++..
T Consensus       155 ~~~~~~~~g~~~y~aPE~~~~~---~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  231 (285)
T cd05631         155 GETVRGRVGTVGYMAPEVINNE---KYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSED  231 (285)
T ss_pred             CCeecCCCCCCCccCHhhhcCC---CCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHH
Confidence            1122345789999999999744   688999999999999999999999987654322222211  12234466778999


Q ss_pred             HHHHHHHhhhcCCCCCCC-----HHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCC
Q 010713          158 VENVLLGCFEYDLRSRPL-----MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG  211 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS-----~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~  211 (503)
                      +.+||.+||+.||.+||+     +.++++      ++++...+|..+.....++|..|.
T Consensus       232 ~~~li~~~l~~~P~~R~~~~~~~~~~~~~------h~~~~~~~~~~~~~~~~~~~~~~~  284 (285)
T cd05631         232 AKSICRMLLTKNPKERLGCRGNGAAGVKQ------HPIFKNINFKRLEANMLEPPFCPD  284 (285)
T ss_pred             HHHHHHHHhhcCHHHhcCCCCCCHHHHhc------CHhhcCCCHHHHHhCcCCcCCCCC
Confidence            999999999999999997     788887      999999999999888888887764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.4e-31  Score=279.58  Aligned_cols=177  Identities=23%  Similarity=0.376  Sum_probs=155.0

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.|.+   ....+++.++..++++++.||+|||.+||+|||||.+|||++.+|.+||+|||++..+...   
T Consensus       349 MEym~ggsLTDvV---t~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~---  422 (550)
T KOG0578|consen  349 MEYMEGGSLTDVV---TKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEE---  422 (550)
T ss_pred             EeecCCCchhhhh---hcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccc---
Confidence            899995 999999   4566999999999999999999999999999999999999999999999999999877542   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-CCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-EIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~-~~~~~~~~~s~~l  158 (503)
                      .....+.+|||+|||||+....   .|.++.||||||+++.||+-|++||-..++......+...+ .....+..+++.+
T Consensus       423 ~~KR~TmVGTPYWMAPEVvtrk---~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~  499 (550)
T KOG0578|consen  423 QSKRSTMVGTPYWMAPEVVTRK---PYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPEL  499 (550)
T ss_pred             cCccccccCCCCccchhhhhhc---ccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHH
Confidence            2244578999999999999844   78999999999999999999999999877766666665433 3445678899999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      ++|+.+||+.|+++|+++.|||+      |+|+.
T Consensus       500 kdFL~~cL~~dv~~RasA~eLL~------HpFl~  527 (550)
T KOG0578|consen  500 KDFLDRCLVVDVEQRASAKELLE------HPFLK  527 (550)
T ss_pred             HHHHHHHhhcchhcCCCHHHHhc------Chhhh
Confidence            99999999999999999999999      77763

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=4.4e-31  Score=265.23  Aligned_cols=192  Identities=24%  Similarity=0.324  Sum_probs=163.4

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.  ..+.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....    
T Consensus        80 ~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~----  153 (291)
T cd05612          80 MEYVPGGELFSYLR--NSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD----  153 (291)
T ss_pred             EeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccC----
Confidence            78998 59999997  456799999999999999999999999999999999999999999999999999876532    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                        ......|++.|+|||++.+.   .++.++|||||||++|+|++|..||.+.+..+.+..+...  ...++..++..++
T Consensus       154 --~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~  226 (291)
T cd05612         154 --RTWTLCGTPEYLAPEVIQSK---GHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAG--KLEFPRHLDLYAK  226 (291)
T ss_pred             --CcccccCChhhcCHHHHcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CcCCCccCCHHHH
Confidence              12345789999999999754   5788999999999999999999999998888887777653  3456777899999


Q ss_pred             HHHHHhhhcCCCCCCC-----HHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRPL-----MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG  211 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS-----~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~  211 (503)
                      +||.+||+.||.+||+     +.++++      ++|+...+|.....+...++..|.
T Consensus       227 ~li~~~l~~dp~~R~~~~~~~~~~~l~------h~~~~~~~~~~~~~~~~~~~~~p~  277 (291)
T cd05612         227 DLIKKLLVVDRTRRLGNMKNGADDVKN------HRWFKSVDWDDVPQRKLKPPIVPK  277 (291)
T ss_pred             HHHHHHcCCCHHHccCCccCCHHHHhc------CccccCCCHHHHhcCCCCCCEeCC
Confidence            9999999999999995     888887      999998888776665555544443

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.97  E-value=5.5e-31  Score=268.74  Aligned_cols=201  Identities=20%  Similarity=0.280  Sum_probs=163.9

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.  ....+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++......   
T Consensus        75 ~Ey~~~g~L~~~i~--~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~---  149 (320)
T cd05590          75 MEFVNGGDLMFHIQ--KSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN---  149 (320)
T ss_pred             EcCCCCchHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC---
Confidence            799985 8988886  4567999999999999999999999999999999999999999999999999998653221   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........||+.|+|||++.+.   .++.++|+|||||++|+|++|..||...+..+.+..+...  ....+..++.++.
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~  224 (320)
T cd05590         150 GKTTSTFCGTPDYIAPEILQEM---LYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND--EVVYPTWLSQDAV  224 (320)
T ss_pred             CCcccccccCccccCHHHHcCC---CCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC--CCCCCCCCCHHHH
Confidence            2223456799999999999744   6788999999999999999999999998888887777643  3456677899999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG  211 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~  211 (503)
                      ++|.+||+.||.+||++.++...-+-+.|+|+...+|.....+...+|..+.
T Consensus       225 ~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~~  276 (320)
T cd05590         225 DILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDWEKLNRRQIEPPFRPR  276 (320)
T ss_pred             HHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCC
Confidence            9999999999999999833222122223999999999877666666555544

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=1.2e-30  Score=265.62  Aligned_cols=202  Identities=22%  Similarity=0.275  Sum_probs=170.7

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCC--
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP--   77 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~--   77 (503)
                      ||||.| +|..++++..++.++++.++.|+.+++.||+|||-.|||+|||||+||||.++|++.|+||.++.......  
T Consensus       156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~  235 (459)
T KOG0610|consen  156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTL  235 (459)
T ss_pred             EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCee
Confidence            899995 99999988888999999999999999999999999999999999999999999999999999875321100  


Q ss_pred             -----------------------------C-C---------------------CCCCCCccCCCCCCCccccCCCCCCCC
Q 010713           78 -----------------------------L-P---------------------SSDLPRRLGTPNYMAPEQWQPEVRGPI  106 (503)
Q Consensus        78 -----------------------------~-~---------------------~~~~~~~~Gt~~Y~APE~l~~~~~~~~  106 (503)
                                                   . .                     .....+++||-.|+|||++.+.   ..
T Consensus       236 ~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~---GH  312 (459)
T KOG0610|consen  236 VKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGE---GH  312 (459)
T ss_pred             eccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecC---CC
Confidence                                         0 0                     0112346799999999999976   56


Q ss_pred             CCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHHHHHHHhhhcCCCCCCC----HHHHHHH
Q 010713          107 SFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL----MTDILRV  182 (503)
Q Consensus       107 s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS----~~elL~~  182 (503)
                      +.++|.|+||+++|||+.|..||.+.+..+.+..++......+-...++..+++||+++|.+||.+|..    +.||.+ 
T Consensus       313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~-  391 (459)
T KOG0610|consen  313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKR-  391 (459)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhc-
Confidence            789999999999999999999999999999999998766555544578899999999999999999997    888887 


Q ss_pred             HHhhccCcCCCCCCCCCCCcCCCCCCCCCCc
Q 010713          183 FKSSQNSVHSDGGWTGHGSRILPDKSSSGYT  213 (503)
Q Consensus       183 L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~~  213 (503)
                           |+||.+.+|.=+  +...||..|...
T Consensus       392 -----HpFF~gVnWaLi--r~~~PP~iP~~~  415 (459)
T KOG0610|consen  392 -----HPFFEGVNWALI--RCARPPEIPKPV  415 (459)
T ss_pred             -----CccccCCChhhe--eccCCCcCCCcc
Confidence                 999999999833  445555555543

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.97  E-value=1.6e-30  Score=265.73  Aligned_cols=197  Identities=22%  Similarity=0.333  Sum_probs=158.5

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.  ....+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......  
T Consensus        84 ~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~--  159 (332)
T cd05614          84 LDYVSGGEMFTHLY--QRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEE--  159 (332)
T ss_pred             EeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccC--
Confidence            799985 9999886  45679999999999999999999999999999999999999999999999999987643221  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHHhccCCCCCCCCCc
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS----VDEIYDAVVRRQEIPPIPSGLP  155 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~----~~e~~~~i~~~~~~~~~~~~~s  155 (503)
                      ........||+.|+|||++.+.  ..++.++|||||||++|+|++|..||....    .......+..  ..+.++..++
T Consensus       160 ~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  235 (332)
T cd05614         160 KERTYSFCGTIEYMAPEIIRGK--GGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK--CDPPFPSFIG  235 (332)
T ss_pred             CCccccccCCccccCHHHhcCC--CCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc--CCCCCCCCCC
Confidence            1122345799999999998743  246789999999999999999999996432    2233333322  3456677899


Q ss_pred             HHHHHHHHHhhhcCCCCCC-----CHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCC
Q 010713          156 PAVENVLLGCFEYDLRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG  211 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RP-----S~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~  211 (503)
                      +.+.++|.+||+.||++||     ++.++++      ++|+...+|.........++..+.
T Consensus       236 ~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~------h~~~~~~~~~~~~~~~~~~~~~~~  290 (332)
T cd05614         236 PEAQDLLHKLLRKDPKKRLGAGPQGASEIKE------HPFFKGLDWEALALRKVNPPFRPS  290 (332)
T ss_pred             HHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc------CCCcCCCCHHHHHhCCCCCCcCCC
Confidence            9999999999999999999     7788887      999998888877665555554443

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.97  E-value=1.1e-30  Score=267.62  Aligned_cols=188  Identities=22%  Similarity=0.353  Sum_probs=160.8

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.  ..+.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....    
T Consensus        97 ~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~----  170 (329)
T PTZ00263         97 LEFVVGGELFTHLR--KAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD----  170 (329)
T ss_pred             EcCCCCChHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCC----
Confidence            799985 8999886  456789999999999999999999999999999999999999999999999999876532    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                        ......||+.|+|||++.+.   .++.++|+|||||++|+|++|..||.+.+..+.+..+...  ...++..++..++
T Consensus       171 --~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~  243 (329)
T PTZ00263        171 --RTFTLCGTPEYLAPEVIQSK---GHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAG--RLKFPNWFDGRAR  243 (329)
T ss_pred             --CcceecCChhhcCHHHHcCC---CCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcC--CcCCCCCCCHHHH
Confidence              22345789999999999754   5788999999999999999999999988887777777653  3556778999999


Q ss_pred             HHHHHhhhcCCCCCCC-----HHHHHHHHHhhccCcCCCCCCCCCCCcCCCCC
Q 010713          160 NVLLGCFEYDLRSRPL-----MTDILRVFKSSQNSVHSDGGWTGHGSRILPDK  207 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS-----~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p  207 (503)
                      +||.+||+.||.+||+     +.+++.      |+|+...+|..+..+..++|
T Consensus       244 ~li~~~L~~dP~~R~~~~~~~~~~ll~------hp~f~~~~~~~~~~~~~~~~  290 (329)
T PTZ00263        244 DLVKGLLQTDHTKRLGTLKGGVADVKN------HPYFHGANWDKLYARYYPAP  290 (329)
T ss_pred             HHHHHHhhcCHHHcCCCCCCCHHHHhc------CCccCCCCHHHHHhCCCCCC
Confidence            9999999999999986     688887      99999988887655444433

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.97  E-value=1.4e-30  Score=265.56  Aligned_cols=199  Identities=22%  Similarity=0.351  Sum_probs=163.0

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.  ....+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....   .
T Consensus        75 ~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~---~  149 (323)
T cd05575          75 LDYVNGGELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIE---H  149 (323)
T ss_pred             EcCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCccccc---C
Confidence            799985 8988886  456799999999999999999999999999999999999999999999999999865322   1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........||+.|+|||++.+.   .++.++|||||||++|+|++|..||...+..+.+..+...  ....+..+++.+.
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~  224 (323)
T cd05575         150 SKTTSTFCGTPEYLAPEVLRKQ---PYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNK--PLRLKPNISVSAR  224 (323)
T ss_pred             CCccccccCChhhcChhhhcCC---CCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHH
Confidence            2223455789999999999754   6888999999999999999999999998888887777653  3345667899999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG  211 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~  211 (503)
                      ++|.+||+.||.+||++.+.+..+  +.++|+...+|..+......+|..+.
T Consensus       225 ~li~~~l~~~p~~R~~~~~~~~~i--l~~~~~~~~~~~~~~~~~~~~~~~~~  274 (323)
T cd05575         225 HLLEGLLQKDRTKRLGAKDDFLEI--KNHVFFSSINWDDLVNKKITPPFNPN  274 (323)
T ss_pred             HHHHHHhhcCHHhCCCCCCCHHHH--HcCCCcCCCCHHHHhhccCCCCcCCC
Confidence            999999999999999885322222  23899999888877666655555544

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.97  E-value=9.6e-31  Score=266.48  Aligned_cols=194  Identities=25%  Similarity=0.419  Sum_probs=162.4

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.  ....+++.++..++.||+.||+|||+++|+||||||+||+++.++.+||+|||++......   
T Consensus        75 ~e~~~gg~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~---  149 (316)
T cd05592          75 MEYLNGGDLMFHIQ--SSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNG---  149 (316)
T ss_pred             EcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCC---
Confidence            79998 58988886  3567999999999999999999999999999999999999999999999999998754321   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........||+.|+|||++.+.   .++.++|+|||||++|+|++|..||.+.+..+.+..+..  ..+.++..++.++.
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~  224 (316)
T cd05592         150 EGKASTFCGTPDYIAPEILKGQ---KYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILN--DRPHFPRWISKEAK  224 (316)
T ss_pred             CCccccccCCccccCHHHHcCC---CCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHc--CCCCCCCCCCHHHH
Confidence            1223356799999999999754   578999999999999999999999999888877776654  34567788999999


Q ss_pred             HHHHHhhhcCCCCCCCHH-HHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRPLMT-DILRVFKSSQNSVHSDGGWTGHGSRILPDKSSS  210 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~-elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~  210 (503)
                      ++|.+||+.||.+||++. ++++      ++++...+|.....+..+++..+
T Consensus       225 ~ll~~~l~~~P~~R~~~~~~l~~------h~~~~~~~~~~~~~~~~~~~~~~  270 (316)
T cd05592         225 DCLSKLFERDPTKRLGVDGDIRQ------HPFFRGIDWERLEKREIPPPFKP  270 (316)
T ss_pred             HHHHHHccCCHHHcCCChHHHHc------CcccCCCCHHHHHhCCCCCCcCC
Confidence            999999999999999875 5555      88998888877665555555444

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.97  E-value=8.1e-31  Score=267.37  Aligned_cols=195  Identities=23%  Similarity=0.361  Sum_probs=165.1

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+.+.  ....+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....   .
T Consensus        80 ~E~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~---~  154 (323)
T cd05616          80 MEYVNGGDLMYQIQ--QVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMW---D  154 (323)
T ss_pred             EcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCC---C
Confidence            79998 59998886  456799999999999999999999999999999999999999999999999999865322   1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........||+.|+|||++.+.   .++.++|+|||||++|+|++|+.||.+.+..+....+...  ...++..++.++.
T Consensus       155 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~  229 (323)
T cd05616         155 GVTTKTFCGTPDYIAPEIIAYQ---PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH--NVAYPKSMSKEAV  229 (323)
T ss_pred             CCccccCCCChhhcCHHHhcCC---CCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCCcCCHHHH
Confidence            2223356789999999999854   6889999999999999999999999998888888777653  3456778999999


Q ss_pred             HHHHHhhhcCCCCCCCH-----HHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRPLM-----TDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG  211 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~-----~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~  211 (503)
                      +++.+||+.||.+|++.     .++++      ++++...+|.....+..++|..+.
T Consensus       230 ~li~~~l~~~p~~R~~~~~~~~~~i~~------h~~~~~~~~~~~~~~~~~~~~~~~  280 (323)
T cd05616         230 AICKGLMTKHPGKRLGCGPEGERDIKE------HAFFRYIDWEKLERKEVQPPYKPK  280 (323)
T ss_pred             HHHHHHcccCHHhcCCCCCCCHHHHhc------CCCcCCCCHHHHHhCCCCCCcCCc
Confidence            99999999999999974     55554      899999999888777776666554

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.97  E-value=9.9e-31  Score=266.85  Aligned_cols=194  Identities=24%  Similarity=0.374  Sum_probs=162.0

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.  ....+++.++..++.||+.||+|||++||+||||||+|||++.++.++|+|||++.....   .
T Consensus        80 ~E~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~---~  154 (324)
T cd05587          80 MEYVNGGDLMYHIQ--QVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIF---G  154 (324)
T ss_pred             EcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCC---C
Confidence            79998 59988886  456789999999999999999999999999999999999999999999999999864321   1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........||+.|+|||++.+.   .++.++|+|||||++|+|++|+.||.+.+..+.+..+..  ....++..+++++.
T Consensus       155 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~  229 (324)
T cd05587         155 GKTTRTFCGTPDYIAPEIIAYQ---PYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIME--HNVSYPKSLSKEAV  229 (324)
T ss_pred             CCceeeecCCccccChhhhcCC---CCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHc--CCCCCCCCCCHHHH
Confidence            2223355789999999999754   678899999999999999999999999888888777765  34456778999999


Q ss_pred             HHHHHhhhcCCCCCCCH-----HHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRPLM-----TDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSS  210 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~-----~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~  210 (503)
                      +++.+||..||.+|++.     .++++      ++++...+|.....+...++..+
T Consensus       230 ~li~~~l~~~P~~R~~~~~~~~~~~~~------hp~~~~~~~~~~~~~~~~~~~~~  279 (324)
T cd05587         230 SICKGLLTKHPAKRLGCGPTGERDIRE------HAFFRRIDWEKLERREIQPPFKP  279 (324)
T ss_pred             HHHHHHhhcCHHHcCCCCCCCHHHHhc------CCCcCCCCHHHHHhCCCCCCccC
Confidence            99999999999999976     55555      89999999977665555554443

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.97  E-value=1.6e-30  Score=265.62  Aligned_cols=195  Identities=17%  Similarity=0.335  Sum_probs=162.6

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.  ....+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....   .
T Consensus        74 ~E~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~---~  148 (323)
T cd05595          74 MEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS---D  148 (323)
T ss_pred             EeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccC---C
Confidence            799984 8988886  456799999999999999999999999999999999999999999999999998865322   1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........||+.|+|||++.+.   .++.++|+|||||++|+|++|..||...+.......+...  ...++..+++++.
T Consensus       149 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~--~~~~p~~~~~~~~  223 (323)
T cd05595         149 GATMKTFCGTPEYLAPEVLEDN---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME--EIRFPRTLSPEAK  223 (323)
T ss_pred             CCccccccCCcCcCCcccccCC---CCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--CCCCCCCCCHHHH
Confidence            1223346799999999999743   6789999999999999999999999988877777666543  3456778999999


Q ss_pred             HHHHHhhhcCCCCCC-----CHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG  211 (503)
Q Consensus       160 ~LI~~cL~~DP~~RP-----S~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~  211 (503)
                      ++|.+||+.||++|+     ++.++++      ++|+....|.........+|..+.
T Consensus       224 ~li~~~L~~dP~~R~~~~~~~~~~~l~------h~~~~~~~~~~~~~~~~~~~~~~~  274 (323)
T cd05595         224 SLLAGLLKKDPKQRLGGGPSDAKEVME------HRFFLSINWQDVVQKKLLPPFKPQ  274 (323)
T ss_pred             HHHHHHccCCHHHhCCCCCCCHHHHHc------CCCcCCCCHHHHHhCCCCCCcCCC
Confidence            999999999999998     8899888      999999888776655544444443

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.97  E-value=8.4e-31  Score=267.06  Aligned_cols=195  Identities=19%  Similarity=0.284  Sum_probs=164.3

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+.+.  ....+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++......   
T Consensus        75 ~E~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~---  149 (321)
T cd05591          75 MEYVNGGDLMFQIQ--RSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILN---  149 (321)
T ss_pred             EeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccC---
Confidence            799985 8988886  4567999999999999999999999999999999999999999999999999998654221   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........||+.|+|||++.+.   .++.++|+|||||++|+|++|+.||...+..+.+..+...  ...++..++.++.
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~  224 (321)
T cd05591         150 GVTTTTFCGTPDYIAPEILQEL---EYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD--DVLYPVWLSKEAV  224 (321)
T ss_pred             CccccccccCccccCHHHHcCC---CCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHH
Confidence            2223355789999999998744   6788999999999999999999999998888888777653  3445667899999


Q ss_pred             HHHHHhhhcCCCCCC-------CHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRP-------LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG  211 (503)
Q Consensus       160 ~LI~~cL~~DP~~RP-------S~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~  211 (503)
                      ++|.+||+.||++||       ++.++++      ++|+...+|.........++..+.
T Consensus       225 ~ll~~~L~~dp~~R~~~~~~~~~~~~~~~------hp~~~~~~~~~~~~~~~~~~~~~~  277 (321)
T cd05591         225 SILKAFMTKNPNKRLGCVASQGGEDAIKQ------HPFFKEIDWVLLEQRKIKPPFKPK  277 (321)
T ss_pred             HHHHHHhccCHHHcCCCCCCCCCHHHHhc------CCccCCCCHHHHHhCCCCCCCCCC
Confidence            999999999999999       7788877      899999999877666555555443

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.1e-30  Score=265.21  Aligned_cols=193  Identities=24%  Similarity=0.389  Sum_probs=160.3

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.  ..+.+++.++..++.||+.||+|||++||+||||||+||+++.++.++|+|||++......   
T Consensus        72 ~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~---  146 (312)
T cd05585          72 LAFINGGELFHHLQ--REGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD---  146 (312)
T ss_pred             EcCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccC---
Confidence            799984 9999986  4567999999999999999999999999999999999999999999999999998754221   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.+..+.+..+..  ....++..+++.+.
T Consensus       147 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  221 (312)
T cd05585         147 DDKTNTFCGTPEYLAPELLLGH---GYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQ--EPLRFPDGFDRDAK  221 (312)
T ss_pred             CCccccccCCcccCCHHHHcCC---CCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHc--CCCCCCCcCCHHHH
Confidence            1223356799999999999754   688999999999999999999999998888887777654  34556788999999


Q ss_pred             HHHHHhhhcCCCCCCC---HHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRPL---MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSS  209 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS---~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~  209 (503)
                      ++|.+||+.||.+||+   +.+++.      ++|+...+|.....+...++..
T Consensus       222 ~li~~~L~~dp~~R~~~~~~~e~l~------hp~~~~~~~~~~~~~~~~~~~~  268 (312)
T cd05585         222 DLLIGLLSRDPTRRLGYNGAQEIKN------HPFFSQLSWKKLLMKGIQPPFK  268 (312)
T ss_pred             HHHHHHcCCCHHHcCCCCCHHHHHc------CCCcCCCCHHHHHhCCCCCCcC
Confidence            9999999999999985   566666      8998887776654444444433

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.97  E-value=9.6e-31  Score=268.03  Aligned_cols=194  Identities=21%  Similarity=0.335  Sum_probs=162.1

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+.+.  ....+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....   .
T Consensus        74 ~Ey~~~g~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~---~  148 (328)
T cd05593          74 MEYVNGGELFFHLS--RERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGIT---D  148 (328)
T ss_pred             EeCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCC---c
Confidence            799984 8988886  456799999999999999999999999999999999999999999999999999865322   1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........||+.|+|||++.+.   .++.++|||||||++|+|++|..||...+..+....+..  ....++..+++++.
T Consensus       149 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~--~~~~~p~~~~~~~~  223 (328)
T cd05593         149 AATMKTFCGTPEYLAPEVLEDN---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM--EDIKFPRTLSADAK  223 (328)
T ss_pred             ccccccccCCcCccChhhhcCC---CCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhcc--CCccCCCCCCHHHH
Confidence            1223345799999999999744   578999999999999999999999988877776665543  33456788999999


Q ss_pred             HHHHHhhhcCCCCCC-----CHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSS  210 (503)
Q Consensus       160 ~LI~~cL~~DP~~RP-----S~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~  210 (503)
                      +||.+||+.||++|+     ++.++++      ++|+...+|.........+|..+
T Consensus       224 ~li~~~L~~dP~~R~~~~~~~~~~il~------h~~~~~~~~~~~~~~~~~~~~~~  273 (328)
T cd05593         224 SLLSGLLIKDPNKRLGGGPDDAKEIMR------HSFFTGVNWQDVYDKKLVPPFKP  273 (328)
T ss_pred             HHHHHHcCCCHHHcCCCCCCCHHHHhc------CCCcCCCCHHHHHhCCCCCCcCC
Confidence            999999999999997     8999987      89999988877665555554443

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.97  E-value=2.4e-30  Score=264.83  Aligned_cols=166  Identities=19%  Similarity=0.371  Sum_probs=136.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCCCCCCCccCCCCCCCcccc
Q 010713           19 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQW   98 (503)
Q Consensus        19 ~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l   98 (503)
                      .+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... ........+++.|+|||++
T Consensus       170 ~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~~~~~~y~aPE~~  248 (338)
T cd05102         170 PLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-YVRKGSARLPLKWMAPESI  248 (338)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcc-hhcccCCCCCccccCcHHh
Confidence            488899999999999999999999999999999999999999999999999876432111 1112233456789999998


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHH
Q 010713           99 QPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMT  177 (503)
Q Consensus        99 ~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~  177 (503)
                      .+.   .++.++|||||||++|||++ |..||.+....+.+............+..+++.+.++|.+||+.||.+|||+.
T Consensus       249 ~~~---~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~  325 (338)
T cd05102         249 FDK---VYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFS  325 (338)
T ss_pred             hcC---CCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHH
Confidence            743   68899999999999999997 99999886654444444444445556778899999999999999999999999


Q ss_pred             HHHHHHHhhcc
Q 010713          178 DILRVFKSSQN  188 (503)
Q Consensus       178 elL~~L~~i~~  188 (503)
                      ++++.|+.+..
T Consensus       326 el~~~l~~~~~  336 (338)
T cd05102         326 ALVEILGDLLQ  336 (338)
T ss_pred             HHHHHHHHHHh
Confidence            99999998754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=9.5e-31  Score=278.34  Aligned_cols=178  Identities=21%  Similarity=0.339  Sum_probs=160.1

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      +||++ |.|++++.  .+++|++.++.+++.||+.|+.|+|..+|+||||||+|+|+|..+++||+|||+|..-..    
T Consensus        91 lEyv~gGELFdylv--~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~----  164 (786)
T KOG0588|consen   91 LEYVPGGELFDYLV--RKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVP----  164 (786)
T ss_pred             EEecCCchhHHHHH--hhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccC----
Confidence            48888 59999997  678999999999999999999999999999999999999999999999999999976433    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      .....+.||+|.|.|||++.+..+  ...++||||.|+|||.||||..||++.+...++.++..  ....+|..++++++
T Consensus       165 gklLeTSCGSPHYA~PEIV~G~pY--dG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~--G~f~MPs~Is~eaQ  240 (786)
T KOG0588|consen  165 GKLLETSCGSPHYAAPEIVSGRPY--DGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQR--GVFEMPSNISSEAQ  240 (786)
T ss_pred             CccccccCCCcccCCchhhcCCCC--CCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHc--CcccCCCcCCHHHH
Confidence            556778899999999999998742  35899999999999999999999999999999988876  45567899999999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCC
Q 010713          160 NVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDG  194 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~  194 (503)
                      +||.+||..||++|.|+.||++      |+|....
T Consensus       241 dLLr~ml~VDp~~RiT~~eI~k------HP~l~g~  269 (786)
T KOG0588|consen  241 DLLRRMLDVDPSTRITTEEILK------HPFLSGY  269 (786)
T ss_pred             HHHHHHhccCccccccHHHHhh------CchhhcC
Confidence            9999999999999999999999      7776543

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=9.6e-31  Score=269.92  Aligned_cols=180  Identities=18%  Similarity=0.277  Sum_probs=157.7

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++.+|+++++.+ +..|++.++..|++||++||+|+|++|+.|||+||+|||+.....+||+|||+|+....    .
T Consensus        89 fE~Md~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S----k  163 (538)
T KOG0661|consen   89 FEFMDCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRS----K  163 (538)
T ss_pred             HHhhhhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEeccccccccccc----C
Confidence            799999999999874 88999999999999999999999999999999999999999899999999999998754    3


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC-----------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-----------  149 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~-----------  149 (503)
                      ...+.++.|..|.|||++..  .+-|+.+.|+|++|||++|+.+-++.|.+.+..+++.+|+.-...|.           
T Consensus       164 pPYTeYVSTRWYRAPEvLLr--s~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La  241 (538)
T KOG0661|consen  164 PPYTEYVSTRWYRAPEVLLR--SGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLA  241 (538)
T ss_pred             CCcchhhhcccccchHHhhh--ccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHH
Confidence            34567789999999999985  34799999999999999999999999999988888877775333221           


Q ss_pred             -----------------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          150 -----------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       150 -----------------~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                                       .....+.++.+||.+|+.+||.+|||+.++++      ++||..
T Consensus       242 ~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~------~pffq~  296 (538)
T KOG0661|consen  242 SAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQ------HPFFQV  296 (538)
T ss_pred             HHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhc------Cccccc
Confidence                             11347889999999999999999999999999      777764

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.97  E-value=3.4e-30  Score=262.89  Aligned_cols=193  Identities=22%  Similarity=0.326  Sum_probs=160.4

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|...+   ....+++.++..++.||+.||+|||++||+||||||+||+++.++.+||+|||++......   
T Consensus        81 ~E~~~~~~L~~~~---~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~---  154 (324)
T cd05589          81 MEYAAGGDLMMHI---HTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF---  154 (324)
T ss_pred             EcCCCCCcHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC---
Confidence            799985 787776   3467999999999999999999999999999999999999999999999999988653221   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........|++.|+|||++.+.   .++.++|+|||||++|+|++|..||.+.+..+....+...  ...++..+++.+.
T Consensus       155 ~~~~~~~~g~~~y~aPE~~~~~---~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~  229 (324)
T cd05589         155 GDRTSTFCGTPEFLAPEVLTET---SYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVND--EVRYPRFLSREAI  229 (324)
T ss_pred             CCcccccccCccccCHhHhcCC---CCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCCCCCHHHH
Confidence            1223456799999999999754   5788999999999999999999999998888777776653  3446778999999


Q ss_pred             HHHHHhhhcCCCCCC-----CHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSS  210 (503)
Q Consensus       160 ~LI~~cL~~DP~~RP-----S~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~  210 (503)
                      ++|.+||+.||.+||     ++.++++      ++++...+|........++|..+
T Consensus       230 ~li~~~L~~dP~~R~~~~~~~~~~l~~------~~~f~~~~~~~~~~~~~~~~~~~  279 (324)
T cd05589         230 SIMRRLLRRNPERRLGSGEKDAEDVKK------QPFFRDINWDDLLARKIKPPFVP  279 (324)
T ss_pred             HHHHHHhhcCHhHcCCCCCCCHHHHhh------CCCcCCCCHHHHHhCCCCcCccC
Confidence            999999999999999     5677766      88998888877655555555443

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.97  E-value=2.3e-30  Score=263.64  Aligned_cols=194  Identities=27%  Similarity=0.413  Sum_probs=160.3

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||+.| +|.+++.  ....+++.++..++.||+.||+|||++||+||||||+||+++.++.++|+|||++.....   .
T Consensus        75 ~E~~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~---~  149 (316)
T cd05620          75 MEFLNGGDLMFHIQ--DKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVF---G  149 (316)
T ss_pred             ECCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeeccc---C
Confidence            799985 8988886  456799999999999999999999999999999999999999999999999999864321   1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........||+.|+|||++.+.   .++.++|+|||||++|+|++|..||.+.+..+....+..  ..+.++..++.+++
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  224 (316)
T cd05620         150 DNRASTFCGTPDYIAPEILQGL---KYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRV--DTPHYPRWITKESK  224 (316)
T ss_pred             CCceeccCCCcCccCHHHHcCC---CCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh--CCCCCCCCCCHHHH
Confidence            1223456789999999999754   688999999999999999999999998888777766654  34556778999999


Q ss_pred             HHHHHhhhcCCCCCCCHH-HHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRPLMT-DILRVFKSSQNSVHSDGGWTGHGSRILPDKSSS  210 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~-elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~  210 (503)
                      ++|.+||+.||++||++. ++++      ++|+...+|.........+|..+
T Consensus       225 ~li~~~l~~dP~~R~~~~~~~~~------h~~f~~~~~~~~~~~~~~~~~~~  270 (316)
T cd05620         225 DILEKLFERDPTRRLGVVGNIRG------HPFFKTINWTALEKRELDPPFKP  270 (316)
T ss_pred             HHHHHHccCCHHHcCCChHHHHc------CCCcCCCCHHHHHhCCCCCCcCC
Confidence            999999999999999984 6655      88998888876554444444433

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.97  E-value=1.1e-30  Score=269.45  Aligned_cols=195  Identities=19%  Similarity=0.243  Sum_probs=167.7

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.  ....+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++.....    
T Consensus       110 ~Ey~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~----  183 (340)
T PTZ00426        110 LEFVIGGEFFTFLR--RNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT----  183 (340)
T ss_pred             EeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC----
Confidence            79997 58999986  456799999999999999999999999999999999999999999999999999876532    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                        ......||+.|+|||++.+.   .++.++|+|||||++|+|++|..||.+.+....+..+...  ...++..+++.+.
T Consensus       184 --~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~  256 (340)
T PTZ00426        184 --RTYTLCGTPEYIAPEILLNV---GHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEG--IIYFPKFLDNNCK  256 (340)
T ss_pred             --CcceecCChhhcCHHHHhCC---CCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcC--CCCCCCCCCHHHH
Confidence              22356799999999999754   5788999999999999999999999998887777777653  3446778899999


Q ss_pred             HHHHHhhhcCCCCCC-----CHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCCcc
Q 010713          160 NVLLGCFEYDLRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGYTE  214 (503)
Q Consensus       160 ~LI~~cL~~DP~~RP-----S~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~~~  214 (503)
                      ++|.+||+.||.+|+     ++.++++      ++|+...+|.....+..+.|..|.+..
T Consensus       257 ~li~~~l~~dp~~R~~~~~~~~~~~~~------hp~f~~~~~~~~~~~~~~~~~~p~~~~  310 (340)
T PTZ00426        257 HLMKKLLSHDLTKRYGNLKKGAQNVKE------HPWFGNIDWVSLLHKNVEVPYKPKYKN  310 (340)
T ss_pred             HHHHHHcccCHHHcCCCCCCCHHHHHc------CCCcCCCCHHHHHhCCCCCCcCCCCCC
Confidence            999999999999995     8998887      999999999887777777777776543

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.97  E-value=3e-30  Score=262.88  Aligned_cols=195  Identities=21%  Similarity=0.344  Sum_probs=162.7

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+.+.  ....+++.++..++.||+.||+|||+++|+||||||+||+++.++.++|+|||++.....   .
T Consensus        75 ~e~~~~~~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~---~  149 (318)
T cd05570          75 MEYVNGGDLMFHIQ--RSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGIL---G  149 (318)
T ss_pred             EcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCc---C
Confidence            799985 8988886  456799999999999999999999999999999999999999999999999998865322   1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      .......+|++.|+|||++.+.   .++.++|+|||||++|+|++|..||.+.+..+....+...  ...++..++..+.
T Consensus       150 ~~~~~~~~g~~~y~aPE~~~~~---~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~  224 (318)
T cd05570         150 GVTTSTFCGTPDYIAPEILSYQ---PYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED--EVRYPRWLSKEAK  224 (318)
T ss_pred             CCcccceecCccccCHHHhcCC---CCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC--CCCCCCcCCHHHH
Confidence            2222345789999999999754   6889999999999999999999999988877777766543  3456678999999


Q ss_pred             HHHHHhhhcCCCCCCCH-----HHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRPLM-----TDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG  211 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~-----~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~  211 (503)
                      +||.+||+.||.+||++     .++++      ++|+...+|.........+|..+.
T Consensus       225 ~li~~~l~~dP~~R~s~~~~~~~~ll~------~~~~~~~~~~~~~~~~~~~~~~~~  275 (318)
T cd05570         225 SILKSFLTKNPEKRLGCLPTGEQDIKG------HPFFREIDWDKLERKEIKPPFKPK  275 (318)
T ss_pred             HHHHHHccCCHHHcCCCCCCCHHHHhc------CCCcCCCCHHHHHhCCCCCCcCCC
Confidence            99999999999999999     77777      899998888776655555554443

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.97  E-value=3e-30  Score=257.45  Aligned_cols=174  Identities=18%  Similarity=0.273  Sum_probs=146.5

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++|+|.+++.......+++.++..++.||+.||+|||++||+||||||+|||++.++.++|+|||++......    
T Consensus        88 ~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----  163 (290)
T cd07862          88 FEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ----  163 (290)
T ss_pred             EccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCC----
Confidence            6899999999998655667999999999999999999999999999999999999999999999999998765331    


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------  148 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~------------  148 (503)
                      .......|++.|+|||++.+.   .++.++|+|||||++|+|++|.+||.+....+.+..+......+            
T Consensus       164 ~~~~~~~~~~~y~aPE~~~~~---~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  240 (290)
T cd07862         164 MALTSVVVTLWYRAPEVLLQS---SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP  240 (290)
T ss_pred             cccccccccccccChHHHhCC---CCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhccc
Confidence            223455789999999998743   67889999999999999999999999887777666665422111            


Q ss_pred             -------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          149 -------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       149 -------------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                                   .+...+++.+.+||.+||+.||++|||+.++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         241 RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             chhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence                         011357788999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>PHA02988 hypothetical protein; Provisional

Probab=99.97  E-value=3.9e-30  Score=258.03  Aligned_cols=178  Identities=18%  Similarity=0.287  Sum_probs=155.5

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecccCCCcEEEccCCcEEEEecCCcccccCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~-gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~   78 (503)
                      |||++| +|.+++.  ....+++...+.++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.....   
T Consensus       101 ~Ey~~~g~L~~~l~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~---  175 (283)
T PHA02988        101 LEYCTRGYLREVLD--KEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSS---  175 (283)
T ss_pred             EEeCCCCcHHHHHh--hCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhcc---
Confidence            799994 8999997  456789999999999999999999984 999999999999999999999999999876532   


Q ss_pred             CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           79 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        79 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                         ......++..|+|||++.+. ...++.++|||||||++|||++|..||.+.+..+++..+......+.++..+++.+
T Consensus       176 ---~~~~~~~~~~y~aPE~~~~~-~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l  251 (283)
T PHA02988        176 ---PPFKNVNFMVYFSYKMLNDI-FSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEI  251 (283)
T ss_pred             ---ccccccCcccccCHHHhhhc-cccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHHH
Confidence               11245688999999998642 24688999999999999999999999999888888888776666677777899999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQ  187 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~  187 (503)
                      .+||.+||+.||++|||+.++++.|+.++
T Consensus       252 ~~li~~cl~~dp~~Rps~~ell~~l~~~~  280 (283)
T PHA02988        252 KCIVEACTSHDSIKRPNIKEILYNLSLYK  280 (283)
T ss_pred             HHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence            99999999999999999999999998765

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.97  E-value=1e-30  Score=265.87  Aligned_cols=172  Identities=24%  Similarity=0.420  Sum_probs=151.5

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC------CcEEEEecCCcccc
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA------DRAVLGDVGIPHLL   73 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~------~~vKL~DFGla~~~   73 (503)
                      ||||+ |+|.+++.  ..+.+++..++.++.||+.||++||+++||||||||+|||++..      -.+||+|||+|+..
T Consensus        88 MEyC~gGDLs~yi~--~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L  165 (429)
T KOG0595|consen   88 MEYCNGGDLSDYIR--RRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL  165 (429)
T ss_pred             EEeCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence            89999 69999997  56689999999999999999999999999999999999999765      46899999999987


Q ss_pred             cCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC-CCCCC
Q 010713           74 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-PPIPS  152 (503)
Q Consensus        74 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~-~~~~~  152 (503)
                      ..    .....+.+|++.|||||++.   ...|+.|+|+||+|++||+|++|+.||...+..++...+...... +.++.
T Consensus       166 ~~----~~~a~tlcGSplYMAPEV~~---~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~  238 (429)
T KOG0595|consen  166 QP----GSMAETLCGSPLYMAPEVIM---SQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPA  238 (429)
T ss_pred             Cc----hhHHHHhhCCccccCHHHHH---hccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhh
Confidence            64    44456789999999999997   447999999999999999999999999999999998877665433 44557


Q ss_pred             CCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          153 GLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       153 ~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      .++..+.+++...+..+|..|.+..+-..
T Consensus       239 ~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~  267 (429)
T KOG0595|consen  239 ELSNPLRELLISLLQRNPKDRISFEDFFD  267 (429)
T ss_pred             hccCchhhhhhHHHhcCccccCchHHhhh
Confidence            78888899999999999999998877665

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.97  E-value=8.1e-30  Score=260.24  Aligned_cols=193  Identities=20%  Similarity=0.312  Sum_probs=161.3

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+.+.  ..+.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++......   
T Consensus        79 ~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---  153 (323)
T cd05584          79 LEYLSGGELFMHLE--REGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE---  153 (323)
T ss_pred             EeCCCCchHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC---
Confidence            789985 8998886  4567899999999999999999999999999999999999999999999999998654221   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........|++.|+|||++.+.   .++.++|||||||++|+|++|..||...+.......+...  ...++..+++.+.
T Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  228 (323)
T cd05584         154 GTVTHTFCGTIEYMAPEILMRS---GHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKG--KLNLPPYLTPEAR  228 (323)
T ss_pred             CCcccccCCCccccChhhccCC---CCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHH
Confidence            1222345789999999999754   5788999999999999999999999988877777666543  4456778999999


Q ss_pred             HHHHHhhhcCCCCCC-----CHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSS  209 (503)
Q Consensus       160 ~LI~~cL~~DP~~RP-----S~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~  209 (503)
                      ++|.+||+.||++||     ++.++++      ++|+....|.........++..
T Consensus       229 ~li~~~l~~~p~~R~~~~~~~~~~l~~------h~~~~~~~~~~~~~~~~~~~~~  277 (323)
T cd05584         229 DLLKKLLKRNPSSRLGAGPGDAAEVQS------HPFFRHVNWDDLLARKVEPPFK  277 (323)
T ss_pred             HHHHHHcccCHhHcCCCCCCCHHHHhc------CCCcCCCCHHHHhcCCCCCCcC
Confidence            999999999999999     8888888      8999888887665554444433

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.97  E-value=1e-29  Score=259.67  Aligned_cols=195  Identities=22%  Similarity=0.362  Sum_probs=163.5

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.  ..+.+++.++..++.||+.||+|||++||+||||||+|||++.++.++|+|||++......   
T Consensus        80 ~Ey~~~g~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~---  154 (323)
T cd05615          80 MEYVNGGDLMYHIQ--QVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD---  154 (323)
T ss_pred             EcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCC---
Confidence            79998 58998886  4567999999999999999999999999999999999999999999999999998653221   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........||+.|+|||++.+.   .++.++|+|||||++|+|++|..||.+.........+...  ...++..++.++.
T Consensus       155 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~  229 (323)
T cd05615         155 GVTTRTFCGTPDYIAPEIIAYQ---PYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEH--NVSYPKSLSKEAV  229 (323)
T ss_pred             CccccCccCCccccCHHHHcCC---CCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCccCCHHHH
Confidence            1222345689999999999744   6789999999999999999999999998888877777653  3456778899999


Q ss_pred             HHHHHhhhcCCCCCCCH-----HHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRPLM-----TDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG  211 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~-----~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~  211 (503)
                      +++.+||+.+|.+|++.     .++++      ++++...+|....++...+|..+.
T Consensus       230 ~li~~~l~~~p~~R~~~~~~~~~~i~~------h~~f~~~~~~~~~~~~~~~~~~~~  280 (323)
T cd05615         230 SICKGLMTKHPSKRLGCGPEGERDIRE------HAFFRRIDWDKLENREIQPPFKPK  280 (323)
T ss_pred             HHHHHHcccCHhhCCCCCCCCHHHHhc------CcccCCCCHHHHhcCCCCcCccCc
Confidence            99999999999999974     44443      899999999887777666666553

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=6.1e-30  Score=262.53  Aligned_cols=188  Identities=20%  Similarity=0.370  Sum_probs=157.4

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCC--
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP--   77 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~--   77 (503)
                      |||++ |+|.+++..  .+.+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++.......  
T Consensus        80 ~e~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~  157 (350)
T cd05573          80 MEYMPGGDLMNLLIR--KDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDR  157 (350)
T ss_pred             EcCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcc
Confidence            79997 599999974  4789999999999999999999999999999999999999999999999999987654321  


Q ss_pred             ------------------------CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 010713           78 ------------------------LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS  133 (503)
Q Consensus        78 ------------------------~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~  133 (503)
                                              ..........||+.|+|||++.+.   .++.++|||||||++|+|++|+.||....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~ell~g~~Pf~~~~  234 (350)
T cd05573         158 EYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGT---PYGLECDWWSLGVILYEMLYGFPPFYSDT  234 (350)
T ss_pred             cccccccccccccccccccccccccccccccccccCccccCHHHHcCC---CCCCceeeEecchhhhhhccCCCCCCCCC
Confidence                                    001122345789999999999854   68899999999999999999999999988


Q ss_pred             hHHHHHHHHhccCCCCCC--CCCcHHHHHHHHHhhhcCCCCCCC-HHHHHHHHHhhccCcCCCCCCCCCC
Q 010713          134 VDEIYDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDLRSRPL-MTDILRVFKSSQNSVHSDGGWTGHG  200 (503)
Q Consensus       134 ~~e~~~~i~~~~~~~~~~--~~~s~~l~~LI~~cL~~DP~~RPS-~~elL~~L~~i~~~~~~~~~w~~~~  200 (503)
                      ..+....+........++  ..+++++.+||.+||. ||.+||+ +.++++      ++|+...+|....
T Consensus       235 ~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~------hp~~~~~~~~~~~  297 (350)
T cd05573         235 LQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKS------HPFFKGIDWENLR  297 (350)
T ss_pred             HHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhc------CCCcCCCCHHHHh
Confidence            877777776633333333  3469999999999997 9999999 999998      9999998887654

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.97  E-value=2.5e-30  Score=263.99  Aligned_cols=198  Identities=22%  Similarity=0.347  Sum_probs=162.3

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.  ....+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++.....   .
T Consensus        75 ~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~---~  149 (325)
T cd05602          75 LDYINGGELFYHLQ--RERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE---H  149 (325)
T ss_pred             EeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCccccc---C
Confidence            799985 8988886  456789999999999999999999999999999999999999999999999999865322   1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.+..+.+..+...  ...++..++..+.
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~  224 (325)
T cd05602         150 NGTTSTFCGTPEYLAPEVLHKQ---PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK--PLQLKPNITNSAR  224 (325)
T ss_pred             CCCcccccCCccccCHHHHcCC---CCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhC--CcCCCCCCCHHHH
Confidence            2223456799999999999754   6788999999999999999999999998888877777553  3345567899999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSS  210 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~  210 (503)
                      ++|.+||+.||.+||++.+.+..+.  .+.++...+|..+......++..+
T Consensus       225 ~li~~~l~~~p~~R~~~~~~~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~  273 (325)
T cd05602         225 HLLEGLLQKDRTKRLGAKDDFMEIK--NHIFFSPINWDDLINKKITPPFNP  273 (325)
T ss_pred             HHHHHHcccCHHHCCCCCCCHHHHh--cCcccCCCCHHHHHhCCCCcCcCC
Confidence            9999999999999998876544333  378888888887765555444433

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.97  E-value=2e-30  Score=264.70  Aligned_cols=192  Identities=20%  Similarity=0.344  Sum_probs=159.7

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecccCCCcEEEccCCcEEEEecCCcccccCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs-~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~   78 (503)
                      |||++| +|.+++.  ....+++.++..++.||+.||+|||+ +||+||||||+|||++.++.+||+|||++......  
T Consensus        74 ~E~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~--  149 (325)
T cd05594          74 MEYANGGELFFHLS--RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--  149 (325)
T ss_pred             EeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCC--
Confidence            799985 8888876  45679999999999999999999997 79999999999999999999999999998653221  


Q ss_pred             CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           79 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        79 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                       ........||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.+..+....+..  ....++..+++++
T Consensus       150 -~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~--~~~~~p~~~~~~~  223 (325)
T cd05594         150 -GATMKTFCGTPEYLAPEVLEDN---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM--EEIRFPRTLSPEA  223 (325)
T ss_pred             -CcccccccCCcccCCHHHHccC---CCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhc--CCCCCCCCCCHHH
Confidence             1223345799999999999744   678999999999999999999999998887777666644  3345677899999


Q ss_pred             HHHHHHhhhcCCCCCC-----CHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCC
Q 010713          159 ENVLLGCFEYDLRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKS  208 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RP-----S~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~  208 (503)
                      .++|.+||+.||++|+     ++.++++      ++|+....|.........+|.
T Consensus       224 ~~li~~~L~~dP~~R~~~~~~~~~~il~------h~~~~~~~~~~~~~~~~~~~~  272 (325)
T cd05594         224 KSLLSGLLKKDPKQRLGGGPDDAKEIMQ------HKFFAGIVWQDVYEKKLVPPF  272 (325)
T ss_pred             HHHHHHHhhcCHHHhCCCCCCCHHHHhc------CCCcCCCCHHHHHhCCCCCCc
Confidence            9999999999999997     8999987      899998888766544443433

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.97  E-value=4.4e-30  Score=261.78  Aligned_cols=194  Identities=24%  Similarity=0.366  Sum_probs=160.7

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.  ....+++.++..++.||+.||+|||++||+||||||+||+++.++.++|+|||++......   
T Consensus        75 ~ey~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~---  149 (316)
T cd05619          75 MEYLNGGDLMFHIQ--SCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG---  149 (316)
T ss_pred             EeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCC---
Confidence            79998 59999886  3467899999999999999999999999999999999999999999999999998653221   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........||+.|+|||++.+.   .++.++|+|||||++|+|++|..||...+..+....+...  .+.++..++.++.
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~  224 (316)
T cd05619         150 DAKTCTFCGTPDYIAPEILLGQ---KYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD--NPCYPRWLTREAK  224 (316)
T ss_pred             CCceeeecCCccccCHHHHcCC---CCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCccCCHHHH
Confidence            1222345789999999999754   6789999999999999999999999988887777766542  3446677899999


Q ss_pred             HHHHHhhhcCCCCCCCHH-HHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRPLMT-DILRVFKSSQNSVHSDGGWTGHGSRILPDKSSS  210 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~-elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~  210 (503)
                      ++|.+||+.||++||++. ++++      ++++...+|........+++..+
T Consensus       225 ~li~~~l~~~P~~R~~~~~~l~~------h~~~~~~~~~~~~~~~~~~~~~~  270 (316)
T cd05619         225 DILVKLFVREPERRLGVKGDIRQ------HPFFREIDWSALEEREIEPPFKP  270 (316)
T ss_pred             HHHHHHhccCHhhcCCChHHHHc------CcccCCCCHHHHHhCCCCCCcCC
Confidence            999999999999999997 6655      89999888876655555444443

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.97  E-value=1.2e-29  Score=263.39  Aligned_cols=192  Identities=22%  Similarity=0.355  Sum_probs=156.2

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+| +|.+++.  +.+.+++.++..++.|++.||+|||++||+||||||+|||++.++.+||+|||++.........
T Consensus        80 ~E~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~  157 (363)
T cd05628          80 MEFLPGGDMMTLLM--KKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRT  157 (363)
T ss_pred             EcCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccccccc
Confidence            799985 9999986  4568999999999999999999999999999999999999999999999999998754321100


Q ss_pred             --------------------------------CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCC
Q 010713           80 --------------------------------SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ  127 (503)
Q Consensus        80 --------------------------------~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~  127 (503)
                                                      .......+||+.|+|||++.+.   .++.++|+|||||++|+|++|..
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~---~~~~~~DvwSlGvil~ell~G~~  234 (363)
T cd05628         158 EFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQT---GYNKLCDWWSLGVIMYEMLIGYP  234 (363)
T ss_pred             cccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCC---CCCCchhhhhhHHHHHHHHhCCC
Confidence                                            0001235799999999999754   68889999999999999999999


Q ss_pred             CCCCCChHHHHHHHHhccCCCCCCC--CCcHHHHHHHHHhhhcCCC---CCCCHHHHHHHHHhhccCcCCCCCCCCCCCc
Q 010713          128 PRCGRSVDEIYDAVVRRQEIPPIPS--GLPPAVENVLLGCFEYDLR---SRPLMTDILRVFKSSQNSVHSDGGWTGHGSR  202 (503)
Q Consensus       128 Pf~~~~~~e~~~~i~~~~~~~~~~~--~~s~~l~~LI~~cL~~DP~---~RPS~~elL~~L~~i~~~~~~~~~w~~~~~~  202 (503)
                      ||.+.+..+.+..+........++.  .+++++.++|.+|+. +|.   .||++.|+++      |+|+.+.+|......
T Consensus       235 Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~------hp~f~~~~~~~~~~~  307 (363)
T cd05628         235 PFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKT------NPFFEGVDWEHIRER  307 (363)
T ss_pred             CCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhC------CCCCCCCCHHHHHhC
Confidence            9999888888888776444444443  478999999998765 444   4689999988      999999999887554


Q ss_pred             CC
Q 010713          203 IL  204 (503)
Q Consensus       203 ~~  204 (503)
                      ..
T Consensus       308 ~~  309 (363)
T cd05628         308 PA  309 (363)
T ss_pred             CC
Confidence            33

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.97  E-value=7.7e-30  Score=254.60  Aligned_cols=196  Identities=21%  Similarity=0.349  Sum_probs=158.2

Q ss_pred             CcCCC-CCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCC
Q 010713            1 MKFYE-GSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~--~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~   77 (503)
                      |||++ |+|.+++...  ....+++.+++.++.||+.||+|||+++|+||||||+||+++.++.++|+|||++.......
T Consensus        72 ~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~  151 (280)
T cd05608          72 MTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ  151 (280)
T ss_pred             EeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCC
Confidence            79998 4898877543  34579999999999999999999999999999999999999999999999999987653321


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHhccCCCCCCCC
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD----EIYDAVVRRQEIPPIPSG  153 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~----e~~~~i~~~~~~~~~~~~  153 (503)
                         .......|++.|+|||++.+.   .++.++|+|||||++|+|++|+.||......    .....+.  .....++..
T Consensus       152 ---~~~~~~~g~~~y~aPE~~~~~---~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~  223 (280)
T cd05608         152 ---SKTKGYAGTPGFMAPELLQGE---EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRIL--NDSVTYPDK  223 (280)
T ss_pred             ---ccccccCCCcCccCHHHhcCC---CCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhc--ccCCCCccc
Confidence               122345789999999999854   6788999999999999999999999765432    2222221  123345677


Q ss_pred             CcHHHHHHHHHhhhcCCCCCC-----CHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCC
Q 010713          154 LPPAVENVLLGCFEYDLRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSS  210 (503)
Q Consensus       154 ~s~~l~~LI~~cL~~DP~~RP-----S~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~  210 (503)
                      ++..+.+++.+||+.||++||     ++.++++      ++|+....|..+.....++|..|
T Consensus       224 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~------h~~~~~~~~~~~~~~~~~~~~~~  279 (280)
T cd05608         224 FSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT------HPLFRDLNWRQLEAGMLPPPFVP  279 (280)
T ss_pred             CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc------ChhhhcCCHhHHhhccCCCCCCC
Confidence            899999999999999999999     6777777      89999988988776667666654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.97  E-value=7.4e-30  Score=260.05  Aligned_cols=186  Identities=18%  Similarity=0.249  Sum_probs=146.0

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      ||||+++|.+++.  ....+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++..........
T Consensus        83 ~e~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~  160 (338)
T cd07859          83 FELMESDLHQVIK--ANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA  160 (338)
T ss_pred             EecCCCCHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccCcc
Confidence            7999999999986  45679999999999999999999999999999999999999999999999999987543221111


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc----------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR----------------  144 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~----------------  144 (503)
                      .......+++.|+|||++.+. ...++.++|||||||++|+|++|+.||.+.+.......+...                
T Consensus       161 ~~~~~~~~t~~y~aPE~~~~~-~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  239 (338)
T cd07859         161 IFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEK  239 (338)
T ss_pred             ccccCCCCCCCcCCHHHHhcc-ccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhh
Confidence            222345789999999998642 236788999999999999999999999876544332221110                


Q ss_pred             ----------cCCCC---CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCC
Q 010713          145 ----------QEIPP---IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGG  195 (503)
Q Consensus       145 ----------~~~~~---~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~  195 (503)
                                ....+   ....+++.+.++|.+||+.||++||++.|+++      ++|+....
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~------hp~f~~~~  297 (338)
T cd07859         240 ARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA------DPYFKGLA  297 (338)
T ss_pred             HHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc------CchhhhcC
Confidence                      00000   11346788999999999999999999999998      78776533

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=3.1e-30  Score=263.61  Aligned_cols=195  Identities=19%  Similarity=0.299  Sum_probs=159.0

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.  ..+.+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++......   
T Consensus        75 ~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~---  149 (330)
T cd05586          75 TDYMSGGELFWHLQ--KEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTD---  149 (330)
T ss_pred             EcCCCCChHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCC---
Confidence            79998 48988886  4677999999999999999999999999999999999999999999999999998653221   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCC-CCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP-SGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~-~~~s~~l  158 (503)
                      ........||+.|+|||++.+.  ..++.++|||||||++|+|++|..||...+..+.+..+.....  .++ ..+++++
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~  225 (330)
T cd05586         150 NKTTNTFCGTTEYLAPEVLLDE--KGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKV--RFPKNVLSDEG  225 (330)
T ss_pred             CCCccCccCCccccCHHHHcCC--CCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCC--CCCCccCCHHH
Confidence            1223456799999999998643  2478899999999999999999999998888777776654332  223 3578999


Q ss_pred             HHHHHHhhhcCCCCCC----CHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCC
Q 010713          159 ENVLLGCFEYDLRSRP----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSS  210 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RP----S~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~  210 (503)
                      .++|.+||+.||.+||    ++.++++      ++|+...+|.........++..+
T Consensus       226 ~~li~~~L~~~P~~R~~~~~~~~~ll~------h~~~~~~~~~~~~~~~~~~~~~~  275 (330)
T cd05586         226 RQFVKGLLNRNPQHRLGAHRDAVELKE------HPFFADIDWDLLSKKQITPPFKP  275 (330)
T ss_pred             HHHHHHHcCCCHHHCCCCCCCHHHHhc------CccccCCCHHHHHhCCCCCCccC
Confidence            9999999999999998    5666665      89998888877655555555444

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=8.3e-30  Score=283.35  Aligned_cols=200  Identities=22%  Similarity=0.320  Sum_probs=174.2

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|..+|.  +..++++.-++.|+..|+.||..||+.|+|||||||+|||+|..|++||+|||.+..+....  
T Consensus       154 MdY~pGGDlltLlS--k~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG--  229 (1317)
T KOG0612|consen  154 MDYMPGGDLLTLLS--KFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADG--  229 (1317)
T ss_pred             EecccCchHHHHHh--hcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCC--
Confidence            899985 9999997  34489999999999999999999999999999999999999999999999999886664322  


Q ss_pred             CCCCCCccCCCCCCCccccCC--CCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCC--CCCc
Q 010713           80 SSDLPRRLGTPNYMAPEQWQP--EVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGLP  155 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~--~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~--~~~s  155 (503)
                      .......+|||-|++||++..  ...+.|+..+|.||+|+++|||+.|..||+..+..+.|.+|+.......+|  ..+|
T Consensus       230 ~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~VS  309 (1317)
T KOG0612|consen  230 TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDVS  309 (1317)
T ss_pred             cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcccccC
Confidence            223456799999999999863  323679999999999999999999999999999999999999987777777  6789


Q ss_pred             HHHHHHHHHhhhcCCCCCCC---HHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCCc
Q 010713          156 PAVENVLLGCFEYDLRSRPL---MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGYT  213 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RPS---~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~~  213 (503)
                      ++.++||.+++. +|+.|..   +.++..      |+||.+.+|..+  +...||..|...
T Consensus       310 eeakdLI~~ll~-~~e~RLgrngiedik~------HpFF~g~~W~~i--R~~~pP~vPevs  361 (1317)
T KOG0612|consen  310 EEAKDLIEALLC-DREVRLGRNGIEDIKN------HPFFEGIDWDNI--RESVPPVVPEVS  361 (1317)
T ss_pred             HHHHHHHHHHhc-ChhhhcccccHHHHHh------CccccCCChhhh--hhcCCCCCCcCC
Confidence            999999999987 7888887   999988      999999999776  667777777643

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.97  E-value=7.8e-30  Score=260.43  Aligned_cols=191  Identities=18%  Similarity=0.312  Sum_probs=157.8

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.. ....+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||++........ 
T Consensus        80 ~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~-  157 (330)
T cd05601          80 MEYQPGGDLLSLLNR-YEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM-  157 (330)
T ss_pred             ECCCCCCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCc-
Confidence            79997 599999874 346799999999999999999999999999999999999999999999999999976543211 


Q ss_pred             CCCCCCccCCCCCCCccccCCCC---CCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCC--CCC
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEV---RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGL  154 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~---~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~--~~~  154 (503)
                       .......||+.|+|||++....   ...++.++|||||||++|+|++|..||........+..+........++  ..+
T Consensus       158 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  236 (330)
T cd05601         158 -VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKV  236 (330)
T ss_pred             -eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCC
Confidence             1223457899999999986321   2357789999999999999999999999888777777776544333333  357


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCCCCC
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGHGS  201 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~~~~  201 (503)
                      ++.+.+||.+||. +|.+||++.++++      ++|+...+|....+
T Consensus       237 ~~~~~~li~~ll~-~p~~R~t~~~l~~------h~~~~~~~~~~~~~  276 (330)
T cd05601         237 SSDFLDLIQSLLC-GQKERLGYEGLCC------HPFFSKIDWNNIRN  276 (330)
T ss_pred             CHHHHHHHHHHcc-ChhhCCCHHHHhC------CCCcCCCCHHHHhh
Confidence            8999999999998 9999999999988      99999988877643

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=8.8e-30  Score=260.59  Aligned_cols=183  Identities=22%  Similarity=0.399  Sum_probs=155.9

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.  ....+++.++..++.||+.||+|||++||+||||||+||+++.++.+||+|||++.....    
T Consensus        80 ~e~~~g~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~----  153 (333)
T cd05600          80 MEYVPGGDFRTLLN--NLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT----  153 (333)
T ss_pred             EeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc----
Confidence            799984 9999996  456799999999999999999999999999999999999999999999999999876532    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCC------CC
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP------SG  153 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~------~~  153 (503)
                        ......||+.|+|||++.+.   .++.++|||||||++|+|++|..||...+..+.+..+.........+      ..
T Consensus       154 --~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  228 (333)
T cd05600         154 --YANSVVGSPDYMAPEVLRGK---GYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFN  228 (333)
T ss_pred             --ccCCcccCccccChhHhcCC---CCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccc
Confidence              23456799999999999754   68899999999999999999999999988877776665433222222      25


Q ss_pred             CcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCCCC
Q 010713          154 LPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGHG  200 (503)
Q Consensus       154 ~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~~~  200 (503)
                      ++.++.++|.+||..+|.+||++.++++      ++|+...+|....
T Consensus       229 ~s~~~~~li~~~l~~~~~rr~s~~~ll~------h~~~~~~~~~~~~  269 (333)
T cd05600         229 LSDEAWDLITKLINDPSRRFGSLEDIKN------HPFFKEVDWNELR  269 (333)
T ss_pred             cCHHHHHHHHHHhhChhhhcCCHHHHHh------CcccCCCCHHHHh
Confidence            6899999999999999999999999998      8999888886654

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.96  E-value=2.7e-29  Score=261.95  Aligned_cols=199  Identities=19%  Similarity=0.292  Sum_probs=162.4

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+ |+|.+++.   ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......  
T Consensus       122 ~Ey~~gg~L~~~l~---~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~--  196 (370)
T cd05596         122 MEYMPGGDLVNLMS---NYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANG--  196 (370)
T ss_pred             EcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCC--
Confidence            79998 58999885   3468999999999999999999999999999999999999999999999999987653211  


Q ss_pred             CCCCCCccCCCCCCCccccCCCC-CCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCC--CCcH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEV-RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS--GLPP  156 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~-~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~--~~s~  156 (503)
                      ........||+.|+|||++.+.. ...++.++|+|||||++|+|++|..||.+.+....+..+........++.  .++.
T Consensus       197 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  276 (370)
T cd05596         197 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISK  276 (370)
T ss_pred             cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCH
Confidence            11223567999999999986532 23478899999999999999999999999888888888776544444443  5799


Q ss_pred             HHHHHHHHhhhcCCCC--CCCHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCC
Q 010713          157 AVENVLLGCFEYDLRS--RPLMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSS  210 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~--RPS~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~  210 (503)
                      ++.+||.+||+.+|.+  |+++.++++      ++|+...+|.....+...+|..|
T Consensus       277 ~~~~li~~~L~~~p~r~~R~s~~ell~------h~~~~~~~~~~~~~~~~~~~~~p  326 (370)
T cd05596         277 QAKDLICAFLTDREVRLGRNGVDEIKS------HPFFKNDQWTFDNIRETVAPVVP  326 (370)
T ss_pred             HHHHHHHHHccChhhccCCCCHHHHhc------CcccCCCChhhHHhcCCCcCccC
Confidence            9999999999999988  999999998      99998888865444444444433

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.96  E-value=1.3e-29  Score=257.98  Aligned_cols=197  Identities=25%  Similarity=0.386  Sum_probs=158.9

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+| +|.+.+.  ....+++.++..++.||+.||+|||++||+||||||+||+++.++.+||+|||++.....   .
T Consensus        75 ~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~---~  149 (321)
T cd05603          75 LDYVNGGELFFHLQ--RERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVE---P  149 (321)
T ss_pred             EcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCC---C
Confidence            799985 8888876  456789999999999999999999999999999999999999999999999999865322   1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........||+.|+|||++.+.   .++.++|+|||||++|+|++|..||...+..+.+..+...  ...++...+..+.
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~  224 (321)
T cd05603         150 EETTSTFCGTPEYLAPEVLRKE---PYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK--PLQLPGGKTVAAC  224 (321)
T ss_pred             CCccccccCCcccCCHHHhcCC---CCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC--CCCCCCCCCHHHH
Confidence            2223456789999999998743   6788999999999999999999999998887777776543  3456678899999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSS  209 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~  209 (503)
                      ++|.+||+.||.+||++..-+  ++...++++...+|.........++..
T Consensus       225 ~li~~~l~~~p~~R~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (321)
T cd05603         225 DLLVGLLHKDQRRRLGAKADF--LEIKNHVFFSPINWDDLYHKRITPPYN  272 (321)
T ss_pred             HHHHHHccCCHhhcCCCCCCH--HHHhCCCCcCCCCHHHHhcCCCCCCcC
Confidence            999999999999999764221  122348888888887665444444433

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.96  E-value=4.6e-30  Score=262.04  Aligned_cols=199  Identities=24%  Similarity=0.364  Sum_probs=162.3

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+.+.  ....+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....   .
T Consensus        75 ~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~---~  149 (325)
T cd05604          75 LDFVNGGELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIA---Q  149 (325)
T ss_pred             EcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCC---C
Confidence            799985 8888886  456799999999999999999999999999999999999999999999999999865322   1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........|++.|+|||++.+.   .++.++|||||||++|+|++|..||...+..+.+..+...  ....+...+..+.
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  224 (325)
T cd05604         150 SDTTTTFCGTPEYLAPEVIRKQ---PYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHK--PLVLRPGASLTAW  224 (325)
T ss_pred             CCCcccccCChhhCCHHHHcCC---CCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcC--CccCCCCCCHHHH
Confidence            2223456799999999999754   6788999999999999999999999998888877777653  3344567899999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG  211 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~  211 (503)
                      ++|.+||+.+|.+||++.+.++.+.  .++|+....|........++|..+.
T Consensus       225 ~ll~~ll~~~p~~R~~~~~~~~~i~--~h~~f~~~~~~~~~~~~~~~~~~~~  274 (325)
T cd05604         225 SILEELLEKDRQRRLGAKEDFLEIQ--EHPFFESLSWTDLEQKKIPPPFNPN  274 (325)
T ss_pred             HHHHHHhccCHHhcCCCCCCHHHHh--cCCCcCCCCHHHHHhCCCCCCcCCc
Confidence            9999999999999998764433222  3889998888777665555555443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.96  E-value=9.7e-30  Score=253.47  Aligned_cols=200  Identities=21%  Similarity=0.335  Sum_probs=157.9

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.......+++..+..++.||+.||+|||+.||+||||||+||+++.++.++|+|||++......   
T Consensus        72 ~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~---  148 (277)
T cd05607          72 MSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG---  148 (277)
T ss_pred             EecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC---
Confidence            789985 8988886545567999999999999999999999999999999999999999999999999998765331   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHhccCCCCCCCCCc
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV----DEIYDAVVRRQEIPPIPSGLP  155 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~----~e~~~~i~~~~~~~~~~~~~s  155 (503)
                       .......++..|+|||++.+.   .++.++|+|||||++|+|++|..||.....    .+......... .......++
T Consensus       149 -~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  223 (277)
T cd05607         149 -KTITQRAGTNGYMAPEILKEE---PYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDE-VKFEHQNFT  223 (277)
T ss_pred             -ceeeccCCCCCccCHHHHccC---CCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccc-cccccccCC
Confidence             122345688999999999754   588999999999999999999999976432    22222222211 111224689


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCC
Q 010713          156 PAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSS  210 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~  210 (503)
                      +++.+||.+||+.||++||++.|+++.+.  .++|+...+|........++|..+
T Consensus       224 ~~~~~li~~~L~~~P~~R~~~~~~~~~~~--~h~~f~~~~~~~~~~~~~~~~~~~  276 (277)
T cd05607         224 EESKDICRLFLAKKPEDRLGSREKNDDPR--KHEFFKTINFPRLEAGLIPPPFVP  276 (277)
T ss_pred             HHHHHHHHHHhccCHhhCCCCccchhhhh--cChhhcCCCHHHHhcCcCCCCCCC
Confidence            99999999999999999999987765333  488999888887776666666543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.96  E-value=1.8e-29  Score=258.60  Aligned_cols=194  Identities=24%  Similarity=0.360  Sum_probs=155.3

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+| +|.+++.  ..+.+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++.....   .
T Consensus        75 ~e~~~~g~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~---~  149 (329)
T cd05588          75 IEFVSGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR---P  149 (329)
T ss_pred             EeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCcccccccc---C
Confidence            799985 8988886  456899999999999999999999999999999999999999999999999999864321   1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC---------hHHHHHHHHhccCCCCC
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS---------VDEIYDAVVRRQEIPPI  150 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~---------~~e~~~~i~~~~~~~~~  150 (503)
                      ........||+.|+|||++.+.   .++.++|+|||||++|+|++|+.||....         .......+..  ....+
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  224 (329)
T cd05588         150 GDTTSTFCGTPNYIAPEILRGE---DYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILE--KQIRI  224 (329)
T ss_pred             CCccccccCCccccCHHHHcCC---CCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHc--CCCCC
Confidence            2223356799999999999754   67889999999999999999999996321         1122333332  34456


Q ss_pred             CCCCcHHHHHHHHHhhhcCCCCCCC------HHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCC
Q 010713          151 PSGLPPAVENVLLGCFEYDLRSRPL------MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSS  210 (503)
Q Consensus       151 ~~~~s~~l~~LI~~cL~~DP~~RPS------~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~  210 (503)
                      |..++..+.++|.+||+.||.+|++      +.++++      |+|+...+|.........++..+
T Consensus       225 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~------hp~~~~~~~~~~~~~~~~~~~~~  284 (329)
T cd05588         225 PRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS------HPFFRNIDWDLLEQKQVLPPYKP  284 (329)
T ss_pred             CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc------CCCCCCCCHHHHHhCCCCCCccc
Confidence            7889999999999999999999997      567766      99999989977655544444433

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.96  E-value=7.4e-30  Score=259.53  Aligned_cols=192  Identities=27%  Similarity=0.365  Sum_probs=158.7

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.  +...+++.++..++.||+.||+|||++||+||||||+||+++.++.++|+|||++......   
T Consensus        77 ~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~---  151 (318)
T cd05582          77 LDFLRGGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH---  151 (318)
T ss_pred             EcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCC---
Confidence            79998 59999886  4567999999999999999999999999999999999999999999999999998764321   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........|++.|+|||++.+.   .++.++|+|||||++|+|++|+.||...+..+....+...  ...++..+++.+.
T Consensus       152 ~~~~~~~~g~~~y~aPE~~~~~---~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~--~~~~p~~~~~~~~  226 (318)
T cd05582         152 EKKAYSFCGTVEYMAPEVVNRR---GHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKA--KLGMPQFLSPEAQ  226 (318)
T ss_pred             CCceecccCChhhcCHHHHcCC---CCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHH
Confidence            1222346789999999999753   5788999999999999999999999988887777766543  3456778999999


Q ss_pred             HHHHHhhhcCCCCCCCHHH-----HHHHHHhhccCcCCCCCCCCCCCcCCCCCC
Q 010713          160 NVLLGCFEYDLRSRPLMTD-----ILRVFKSSQNSVHSDGGWTGHGSRILPDKS  208 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~e-----lL~~L~~i~~~~~~~~~w~~~~~~~~~~p~  208 (503)
                      +||.+||+.||++||++.+     +++      ++++...+|.........++.
T Consensus       227 ~li~~~l~~~P~~R~~a~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~  274 (318)
T cd05582         227 SLLRALFKRNPANRLGAGPDGVEEIKR------HPFFSTIDWNKLYRREIKPPF  274 (318)
T ss_pred             HHHHHHhhcCHhHcCCCCCCCHHHHhC------CCCcCCCCHHHHHhcCCCCCc
Confidence            9999999999999999544     444      888888888765544444443

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.96  E-value=9.7e-30  Score=266.41  Aligned_cols=182  Identities=25%  Similarity=0.405  Sum_probs=159.1

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||+. |+|.++|....+..++..+.+.++.|||+|++||+++++|||||-..|||++++..+||+|||+|+...+....
T Consensus       280 tE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~  359 (468)
T KOG0197|consen  280 TEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYT  359 (468)
T ss_pred             EEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCcee
Confidence            79998 89999998766788999999999999999999999999999999999999999999999999999954432211


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                        ......-...|.|||.+.   .+.++.+|||||||++||||+| |+.||.+.+..+.+..+.. +.+.+.|..+|+++
T Consensus       360 --~~~~~kfPIkWtAPEa~~---~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~-GyRlp~P~~CP~~v  433 (468)
T KOG0197|consen  360 --ASEGGKFPIKWTAPEALN---YGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLER-GYRLPRPEGCPDEV  433 (468)
T ss_pred             --ecCCCCCCceecCHHHHh---hCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhc-cCcCCCCCCCCHHH
Confidence              111222345899999998   5589999999999999999999 9999999999999987755 56777899999999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      .+++..||+.+|++|||+..+...|+.+..
T Consensus       434 Y~lM~~CW~~~P~~RPtF~~L~~~l~~~~~  463 (468)
T KOG0197|consen  434 YELMKSCWHEDPEDRPTFETLREVLEDFFT  463 (468)
T ss_pred             HHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence            999999999999999999999998887654

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.5e-29  Score=253.14  Aligned_cols=197  Identities=20%  Similarity=0.337  Sum_probs=162.0

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.......+++.++..++.|++.||+|||+++|+|+||||+||++++++.++|+|||++.....    
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~----  154 (285)
T cd05605          79 LTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPE----  154 (285)
T ss_pred             EeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCC----
Confidence            78998 5898888654456799999999999999999999999999999999999999999999999999876532    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh--ccCCCCCCCCCcHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR--RQEIPPIPSGLPPA  157 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~--~~~~~~~~~~~s~~  157 (503)
                      ........|++.|+|||++.+.   .++.++|+|||||++|+|++|..||.+.........+..  ......++..++..
T Consensus       155 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (285)
T cd05605         155 GETIRGRVGTVGYMAPEVVKNE---RYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEA  231 (285)
T ss_pred             CCccccccCCCCccCcHHhcCC---CCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHH
Confidence            1122345789999999999743   678899999999999999999999987655433222221  12234456678999


Q ss_pred             HHHHHHHhhhcCCCCCC-----CHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCC
Q 010713          158 VENVLLGCFEYDLRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSS  210 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RP-----S~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~  210 (503)
                      +.+||.+||..||.+||     ++.++++      ++|+...+|........++|..|
T Consensus       232 ~~~li~~~l~~~P~~R~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~~~  283 (285)
T cd05605         232 ARSICRQLLTKDPGFRLGCRGEGAEEVKA------HPFFRTANFKRLEAGMLEPPFCP  283 (285)
T ss_pred             HHHHHHHHccCCHHHhcCCCCCCHHHHhc------CcCccCCCHHHHhhCCCCCCCCC
Confidence            99999999999999999     8888887      99999999998877777776655

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.96  E-value=1.2e-29  Score=259.51  Aligned_cols=195  Identities=25%  Similarity=0.363  Sum_probs=157.1

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.  ..+.+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....   .
T Consensus        75 ~e~~~~~~L~~~~~--~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~---~  149 (327)
T cd05617          75 IEYVNGGDLMFHMQ--RQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLG---P  149 (327)
T ss_pred             EeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccC---C
Confidence            799984 8988886  456799999999999999999999999999999999999999999999999999865322   1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCC------Ch-HHHHHHHHhccCCCCCCC
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR------SV-DEIYDAVVRRQEIPPIPS  152 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~------~~-~e~~~~i~~~~~~~~~~~  152 (503)
                      ........||+.|+|||++.+.   .++.++|+|||||++|+|++|..||...      .. ......+..  ....+|.
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~p~  224 (327)
T cd05617         150 GDTTSTFCGTPNYIAPEILRGE---EYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILE--KPIRIPR  224 (327)
T ss_pred             CCceecccCCcccCCHHHHCCC---CCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHh--CCCCCCC
Confidence            1223456799999999999754   6788999999999999999999999532      12 223333322  3445778


Q ss_pred             CCcHHHHHHHHHhhhcCCCCCCCH------HHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCC
Q 010713          153 GLPPAVENVLLGCFEYDLRSRPLM------TDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG  211 (503)
Q Consensus       153 ~~s~~l~~LI~~cL~~DP~~RPS~------~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~  211 (503)
                      .++..+.++|.+||+.||.+|+++      .++++      |+|+...+|.........++..+.
T Consensus       225 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~------h~~f~~~~~~~~~~~~~~~~~~~~  283 (327)
T cd05617         225 FLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKS------HTFFRSIDWDLLEKKQVTPPFKPQ  283 (327)
T ss_pred             CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHc------CCCCCCCCHHHHHhCCCCCCccCC
Confidence            899999999999999999999985      45555      999999999877666666555544

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=2.2e-29  Score=260.56  Aligned_cols=187  Identities=21%  Similarity=0.354  Sum_probs=154.6

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+ |+|.+++.  ..+.+++.++..++.||+.||+|||++||+||||||+|||++.++.++|+|||++.........
T Consensus        80 ~E~~~~g~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~  157 (364)
T cd05599          80 MEYLPGGDMMTLLM--KKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRT  157 (364)
T ss_pred             ECCCCCcHHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceeccccccc
Confidence            79998 58999886  4567999999999999999999999999999999999999999999999999998654321100


Q ss_pred             C-----------------------------------CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh
Q 010713           80 S-----------------------------------SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT  124 (503)
Q Consensus        80 ~-----------------------------------~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt  124 (503)
                      .                                   ......+||+.|+|||++.+.   .++.++|||||||++|+|++
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~el~~  234 (364)
T cd05599         158 EFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQT---GYNKECDWWSLGVIMYEMLV  234 (364)
T ss_pred             cccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCC---CCCCeeeeecchhHHHHhhc
Confidence            0                                   001134699999999998743   68899999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHhccCCCCCC--CCCcHHHHHHHHHhhhcCCCCCCC---HHHHHHHHHhhccCcCCCCCCCCC
Q 010713          125 GVQPRCGRSVDEIYDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDLRSRPL---MTDILRVFKSSQNSVHSDGGWTGH  199 (503)
Q Consensus       125 G~~Pf~~~~~~e~~~~i~~~~~~~~~~--~~~s~~l~~LI~~cL~~DP~~RPS---~~elL~~L~~i~~~~~~~~~w~~~  199 (503)
                      |..||.+.+..+.+..+........++  ..+++.+.+||.+|+. +|.+|++   +.++++      ++|+...+|...
T Consensus       235 G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~------h~~~~~~~~~~~  307 (364)
T cd05599         235 GYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS------HPFFKGVDWEHI  307 (364)
T ss_pred             CCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc------CCCcCCCCHHHH
Confidence            999999988887777776544443444  3578999999999997 9999997   999888      999999888764

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.96  E-value=1.2e-29  Score=260.03  Aligned_cols=195  Identities=23%  Similarity=0.355  Sum_probs=156.0

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.  ....+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++.....   .
T Consensus        75 ~E~~~~~~L~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~---~  149 (329)
T cd05618          75 IEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR---P  149 (329)
T ss_pred             EeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccC---C
Confidence            799984 8888875  456799999999999999999999999999999999999999999999999999865322   1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCC---------ChHHHHHHHHhccCCCCC
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR---------SVDEIYDAVVRRQEIPPI  150 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~---------~~~e~~~~i~~~~~~~~~  150 (503)
                      ........||+.|+|||++.+.   .++.++|+|||||++|+|++|..||...         ........+..  ....+
T Consensus       150 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~  224 (329)
T cd05618         150 GDTTSTFCGTPNYIAPEILRGE---DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRI  224 (329)
T ss_pred             CCccccccCCccccCHHHHcCC---CCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc--CCCCC
Confidence            2223456799999999999754   6788999999999999999999999521         11122333322  34457


Q ss_pred             CCCCcHHHHHHHHHhhhcCCCCCCC------HHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCC
Q 010713          151 PSGLPPAVENVLLGCFEYDLRSRPL------MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG  211 (503)
Q Consensus       151 ~~~~s~~l~~LI~~cL~~DP~~RPS------~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~  211 (503)
                      |..++..+.++|.+||+.||.+||+      +.++++      |+|+...+|.....+...++..+.
T Consensus       225 p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~------hp~f~~~~~~~~~~~~~~~~~~~~  285 (329)
T cd05618         225 PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG------HPFFRNVDWDLMEQKQVVPPFKPN  285 (329)
T ss_pred             CCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhc------CCCCCCCCHHHHHcCCCCcCccCC
Confidence            7889999999999999999999998      456665      999999999776666555555443

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=2.1e-30  Score=256.65  Aligned_cols=197  Identities=20%  Similarity=0.341  Sum_probs=174.1

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||.+| .|+-.|.  +...+++..++.|..+|+.||.|||+++|++||||.+|+|+|.+|++||+|||+++.--.   .
T Consensus       247 MeyanGGeLf~HLs--rer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~---~  321 (516)
T KOG0690|consen  247 MEYANGGELFFHLS--RERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK---Y  321 (516)
T ss_pred             EEEccCceEeeehh--hhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhccc---c
Confidence            899995 7776665  467799999999999999999999999999999999999999999999999999976422   2


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      .....+++|||.|+|||++...   .|..++|.|.+|+++|||++|+.||...+...++..|...  ...+|..++++.+
T Consensus       322 g~t~kTFCGTPEYLAPEVleDn---DYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~e--d~kFPr~ls~eAk  396 (516)
T KOG0690|consen  322 GDTTKTFCGTPEYLAPEVLEDN---DYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILME--DLKFPRTLSPEAK  396 (516)
T ss_pred             cceeccccCChhhcCchhhccc---cccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhh--hccCCccCCHHHH
Confidence            4456789999999999999844   6889999999999999999999999999999998888763  4568899999999


Q ss_pred             HHHHHhhhcCCCCCC-----CHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCCc
Q 010713          160 NVLLGCFEYDLRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGYT  213 (503)
Q Consensus       160 ~LI~~cL~~DP~~RP-----S~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~~  213 (503)
                      .|+..+|.+||.+|.     ++.||.+      +.||..++|...-.+.++||..|+.+
T Consensus       397 tLLsGLL~kdP~kRLGgGpdDakEi~~------h~FF~~v~W~~~~~Kki~PPfKPqVt  449 (516)
T KOG0690|consen  397 TLLSGLLKKDPKKRLGGGPDDAKEIMR------HRFFASVDWEATYRKKIEPPFKPQVT  449 (516)
T ss_pred             HHHHHHhhcChHhhcCCCchhHHHHHh------hhhhccCCHHHHHHhccCCCCCCCcc
Confidence            999999999999996     4566655      99999999999999999999998754

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.96  E-value=5.3e-30  Score=252.13  Aligned_cols=175  Identities=21%  Similarity=0.321  Sum_probs=149.2

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      +|||+-++.+.+++..+ .++.+.+.+|++|++.|+.|+|+++++||||||+|||++.++.+||||||+|+.+..   +.
T Consensus        80 FE~~dhTvL~eLe~~p~-G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~---pg  155 (396)
T KOG0593|consen   80 FEYCDHTVLHELERYPN-GVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSA---PG  155 (396)
T ss_pred             eeecchHHHHHHHhccC-CCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcC---Cc
Confidence            69999999999987544 489999999999999999999999999999999999999999999999999998764   34


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC-------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-------------  147 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~-------------  147 (503)
                      ...+.++.|..|.|||.+.+.  .+|...+||||+||++.||++|++.|.+.+.-++...|......             
T Consensus       156 d~YTDYVATRWYRaPELLvGD--tqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~  233 (396)
T KOG0593|consen  156 DNYTDYVATRWYRAPELLVGD--TQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNP  233 (396)
T ss_pred             chhhhhhhhhhccChhhhccc--CcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCC
Confidence            455677899999999999975  37899999999999999999999999998877766655432111             


Q ss_pred             ------CCCC----------CCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          148 ------PPIP----------SGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       148 ------~~~~----------~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                            .+-+          +.++..+.+|+.+||+.||++|++.++++.
T Consensus       234 ~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~  283 (396)
T KOG0593|consen  234 FFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH  283 (396)
T ss_pred             ceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence                  0101          345677899999999999999999999987

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.96  E-value=2.2e-29  Score=252.29  Aligned_cols=175  Identities=24%  Similarity=0.342  Sum_probs=143.2

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++|+|.+++.. ....+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||++......   .
T Consensus        82 ~e~~~~~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~---~  157 (288)
T cd07871          82 FEYLDSDLKQYLDN-CGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVP---T  157 (288)
T ss_pred             EeCCCcCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCC---C
Confidence            79999999999864 3456899999999999999999999999999999999999999999999999998754321   1


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------  148 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~------------  148 (503)
                      .......+++.|+|||++.+.  ..++.++|+|||||++|+|++|+.||.+.+..+....+......+            
T Consensus       158 ~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (288)
T cd07871         158 KTYSNEVVTLWYRPPDVLLGS--TEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNE  235 (288)
T ss_pred             ccccCceecccccChHHhcCC--cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccch
Confidence            222345788999999998642  357889999999999999999999999887766655543321110            


Q ss_pred             ----------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          149 ----------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       149 ----------------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                                      .....++.++.+||.+||+.||.+|||+.|+++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         236 EFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             hhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence                            011346788999999999999999999999997

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.96  E-value=5.4e-29  Score=255.11  Aligned_cols=192  Identities=19%  Similarity=0.308  Sum_probs=156.3

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.. ....+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++.......  
T Consensus        80 ~ey~~~g~L~~~l~~-~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~--  156 (332)
T cd05623          80 MDYYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG--  156 (332)
T ss_pred             EeccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCC--
Confidence            79997 599999974 34679999999999999999999999999999999999999999999999999986543211  


Q ss_pred             CCCCCCccCCCCCCCccccCCC--CCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCC---CCC
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPE--VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP---SGL  154 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~--~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~---~~~  154 (503)
                      ........||+.|+|||++...  ....++.++|+|||||++|+|++|+.||...+..+.+..+........++   ..+
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~  236 (332)
T cd05623         157 TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDV  236 (332)
T ss_pred             cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccC
Confidence            1122345799999999998632  12357889999999999999999999999988888888776654333333   467


Q ss_pred             cHHHHHHHHHhhhcCCCC--CCCHHHHHHHHHhhccCcCCCCCCCCCCC
Q 010713          155 PPAVENVLLGCFEYDLRS--RPLMTDILRVFKSSQNSVHSDGGWTGHGS  201 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~--RPS~~elL~~L~~i~~~~~~~~~w~~~~~  201 (503)
                      ++++.+||.+||..++.+  |+++.++++      ++|+...+|....+
T Consensus       237 s~~~~~li~~ll~~~~~r~~r~~~~~~~~------h~~f~~~~~~~~~~  279 (332)
T cd05623         237 SEDAKDLIRRLICSREHRLGQNGIEDFKQ------HPFFTGIDWDNIRN  279 (332)
T ss_pred             CHHHHHHHHHHccChhhhcCCCCHHHHhC------CCCcCCCCHHHHhh
Confidence            999999999999765444  689999998      99999999877643

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.96  E-value=7.5e-30  Score=266.10  Aligned_cols=175  Identities=23%  Similarity=0.408  Sum_probs=160.8

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |+||+| +|.+.+...++..++++.+..|+.||+.|++|||+++|+|||||+.||+++.++.++|+|||+|+.....   
T Consensus        83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~---  159 (426)
T KOG0589|consen   83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE---  159 (426)
T ss_pred             EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCc---
Confidence            899995 9999998877788999999999999999999999999999999999999999999999999999987542   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      .....+.+||+.||+||.+.+.   +|+.|+|||||||++|||++-+++|...+...+..++.... ..++|..++.+++
T Consensus       160 ~~~a~tvvGTp~YmcPEil~d~---pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~-~~Plp~~ys~el~  235 (426)
T KOG0589|consen  160 DSLASTVVGTPYYMCPEILSDI---PYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL-YSPLPSMYSSELR  235 (426)
T ss_pred             hhhhheecCCCcccCHHHhCCC---CCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhcc-CCCCCccccHHHH
Confidence            2244578999999999999865   89999999999999999999999999999999999998765 5678999999999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHHH
Q 010713          160 NVLLGCFEYDLRSRPLMTDILRV  182 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~~  182 (503)
                      .+|..||..+|+.||++.++|..
T Consensus       236 ~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  236 SLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             HHHHHHhhcCCccCCCHHHHhhC
Confidence            99999999999999999999984

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.1e-29  Score=260.36  Aligned_cols=180  Identities=19%  Similarity=0.307  Sum_probs=150.4

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |.|+. ||+.+++...-...|++..+..+++++++||.|||++|.||||||+.||||+.+|.+||+|||.+..+......
T Consensus       103 mpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R  182 (516)
T KOG0582|consen  103 MPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDR  182 (516)
T ss_pred             ehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccCce
Confidence            67888 69999998776667999999999999999999999999999999999999999999999999987655433211


Q ss_pred             -CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC--------C
Q 010713           80 -SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--------I  150 (503)
Q Consensus        80 -~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~--------~  150 (503)
                       .....++.||+.|||||++..... .|++|+||||||++..||.+|..||....+.++....++...+..        .
T Consensus       183 ~~~rf~tfvgtp~wmAPEvl~q~~~-GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~  261 (516)
T KOG0582|consen  183 QVTRFNTFVGTPCWMAPEVLMQQLH-GYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDE  261 (516)
T ss_pred             eeEeeccccCcccccChHHhhhccc-CccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHH
Confidence             222267799999999999765533 599999999999999999999999999888777655554332211        1


Q ss_pred             CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          151 PSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       151 ~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ...++..++++|..||++||.+|||+.++++
T Consensus       262 ~k~~~ksf~e~i~~CL~kDP~kRptAskLlk  292 (516)
T KOG0582|consen  262 DKKFSKSFREMIALCLVKDPSKRPTASKLLK  292 (516)
T ss_pred             hhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence            1456788999999999999999999999998

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.96  E-value=5.2e-30  Score=249.04  Aligned_cols=180  Identities=22%  Similarity=0.311  Sum_probs=156.0

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      +|.|+ |.|+|+|.  ..-.+|+.+.+++++|+++|++|||.++|+||||||+|||++++.+++|+|||++..+..    
T Consensus       102 Fdl~prGELFDyLt--s~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~----  175 (411)
T KOG0599|consen  102 FDLMPRGELFDYLT--SKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEP----  175 (411)
T ss_pred             hhhcccchHHHHhh--hheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCC----
Confidence            46677 89999996  456799999999999999999999999999999999999999999999999999988754    


Q ss_pred             CCCCCCccCCCCCCCccccCCC---CCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCC--CCC
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGL  154 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~---~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~--~~~  154 (503)
                      .......||||+|+|||.+.+.   ....|+..+|+|++|+++|.|+.|.+||......-+...++.++.....|  .++
T Consensus       176 GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadi  255 (411)
T KOG0599|consen  176 GEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADI  255 (411)
T ss_pred             chhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhc
Confidence            4556678999999999998653   23357889999999999999999999999887777777777766544333  678


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      +...++||.+||+.||.+|.|++|+|+      |+|+.
T Consensus       256 s~~~KdLIsrlLqVdp~~Ritake~La------Hpff~  287 (411)
T KOG0599|consen  256 SATVKDLISRLLQVDPTKRITAKEALA------HPFFI  287 (411)
T ss_pred             cccHHHHHHHHHeeCchhcccHHHHhc------ChHHH
Confidence            899999999999999999999999998      66664

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.96  E-value=4.2e-29  Score=248.61  Aligned_cols=174  Identities=18%  Similarity=0.285  Sum_probs=143.9

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++++|.+++.......+++.++..++.|++.||+|||++||+||||||+||+++.++.+||+|||++.....    .
T Consensus        86 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~----~  161 (288)
T cd07863          86 FEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSC----Q  161 (288)
T ss_pred             EcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccccC----c
Confidence            689999999999765556799999999999999999999999999999999999999999999999999876532    1


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------  148 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~------------  148 (503)
                      .......++..|+|||++.+.   .++.++|||||||++|+|++|.+||......+....+......+            
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~---~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (288)
T cd07863         162 MALTPVVVTLWYRAPEVLLQS---TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLP  238 (288)
T ss_pred             ccCCCccccccccCchHhhCC---CCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccccccc
Confidence            122345688999999999743   58899999999999999999999998877666555543311000            


Q ss_pred             -------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          149 -------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       149 -------------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                                   .....++..+.++|.+||+.||++|||+.+++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         239 RGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             ccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence                         011356788999999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=5.4e-29  Score=259.44  Aligned_cols=187  Identities=21%  Similarity=0.335  Sum_probs=152.7

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+ |+|.+++.  ..+.+++..+..++.|++.||+|||++||+||||||+|||++.++.++|+|||++..+......
T Consensus        80 ~E~~~gg~L~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~  157 (377)
T cd05629          80 MEFLPGGDLMTMLI--KYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDS  157 (377)
T ss_pred             EeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence            79997 59999986  4567999999999999999999999999999999999999999999999999998633210000


Q ss_pred             ------------C--------------------------------CCCCCccCCCCCCCccccCCCCCCCCCCccchHHH
Q 010713           80 ------------S--------------------------------SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGF  115 (503)
Q Consensus        80 ------------~--------------------------------~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSL  115 (503)
                                  .                                ......+||+.|+|||++.+.   .++.++|||||
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSl  234 (377)
T cd05629         158 AYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQ---GYGQECDWWSL  234 (377)
T ss_pred             ccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccC---CCCCceeeEec
Confidence                        0                                000124699999999999744   68899999999


Q ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCC--CCcHHHHHHHHHhhhcCCCCC---CCHHHHHHHHHhhccCc
Q 010713          116 ACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS--GLPPAVENVLLGCFEYDLRSR---PLMTDILRVFKSSQNSV  190 (503)
Q Consensus       116 GviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~--~~s~~l~~LI~~cL~~DP~~R---PS~~elL~~L~~i~~~~  190 (503)
                      ||++|+|++|..||.+.+..+.+..+........++.  .++.++.+||.+||. +|.+|   +++.++++      ++|
T Consensus       235 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~------hp~  307 (377)
T cd05629         235 GAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKS------HPF  307 (377)
T ss_pred             chhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhc------CCC
Confidence            9999999999999998888777777765444444443  578999999999997 77765   59999988      999


Q ss_pred             CCCCCCCCC
Q 010713          191 HSDGGWTGH  199 (503)
Q Consensus       191 ~~~~~w~~~  199 (503)
                      +.+.+|...
T Consensus       308 ~~~~~~~~~  316 (377)
T cd05629         308 FRGVDWDTI  316 (377)
T ss_pred             cCCCCHHHH
Confidence            998888766

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.96  E-value=9.7e-30  Score=266.23  Aligned_cols=171  Identities=29%  Similarity=0.447  Sum_probs=154.9

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      .|||.|+|..++.  .++.++++.+..+++|++.||.|||+++|+|||+||.|||++..+.+|++|||+|+....   ..
T Consensus        80 te~a~g~L~~il~--~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~---~t  154 (808)
T KOG0597|consen   80 TEYAVGDLFTILE--QDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMST---NT  154 (808)
T ss_pred             ehhhhhhHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhccc---Cc
Confidence            3899999999998  678999999999999999999999999999999999999999999999999999987654   23


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHHH
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVEN  160 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~~  160 (503)
                      .......|||.|||||...+.   +|+..+|+|||||++|||++|++||...+..++...|..  .....|...+..+.+
T Consensus       155 ~vltsikGtPlYmAPElv~e~---pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~--d~v~~p~~~S~~f~n  229 (808)
T KOG0597|consen  155 SVLTSIKGTPLYMAPELVEEQ---PYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILK--DPVKPPSTASSSFVN  229 (808)
T ss_pred             eeeeeccCcccccCHHHHcCC---CccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhc--CCCCCcccccHHHHH
Confidence            344567899999999999854   899999999999999999999999999988888888875  344456689999999


Q ss_pred             HHHHhhhcCCCCCCCHHHHHH
Q 010713          161 VLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       161 LI~~cL~~DP~~RPS~~elL~  181 (503)
                      |+..+|.+||.+|.+..+++.
T Consensus       230 fl~gLL~kdP~~RltW~~Ll~  250 (808)
T KOG0597|consen  230 FLQGLLIKDPAQRLTWTDLLG  250 (808)
T ss_pred             HHHHHhhcChhhcccHHHHhc
Confidence            999999999999999999987

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.6e-29  Score=256.42  Aligned_cols=196  Identities=24%  Similarity=0.368  Sum_probs=172.7

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|--.+.  .-+++.+..+..|+.+|+-||-+||++||++||||.+|||++.+|++||+|||+++.-.   ..
T Consensus       429 MEyvnGGDLMyhiQ--Q~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni---~~  503 (683)
T KOG0696|consen  429 MEYVNGGDLMYHIQ--QVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI---FD  503 (683)
T ss_pred             EEEecCchhhhHHH--HhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccc---cC
Confidence            899996 5554444  45789999999999999999999999999999999999999999999999999987532   23


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      .....+++|||.|+|||++.   +.+|+.++|.||+|++||||+.|++||.+.+..++++.|...  ...+|..++.+..
T Consensus       504 ~~TTkTFCGTPdYiAPEIi~---YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~eh--nvsyPKslSkEAv  578 (683)
T KOG0696|consen  504 GVTTKTFCGTPDYIAPEIIA---YQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEH--NVSYPKSLSKEAV  578 (683)
T ss_pred             CcceeeecCCCcccccceEE---ecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHc--cCcCcccccHHHH
Confidence            45566889999999999998   568999999999999999999999999999999999999874  3457899999999


Q ss_pred             HHHHHhhhcCCCCCCC-----HHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRPL-----MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGY  212 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS-----~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~  212 (503)
                      ++....|.+.|.+|..     -.+|.+      |+||..++|..++++.++||..|..
T Consensus       579 ~ickg~ltK~P~kRLGcg~~ge~di~~------H~FFR~iDWek~E~~eiqPPfkPk~  630 (683)
T KOG0696|consen  579 AICKGLLTKHPGKRLGCGPEGERDIRE------HPFFRRIDWEKLERREIQPPFKPKI  630 (683)
T ss_pred             HHHHHHhhcCCccccCCCCccccchhh------CcchhhccHHHHhhccCCCCCCCcc
Confidence            9999999999999963     234444      8999999999999999999999864

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.96  E-value=7.9e-29  Score=246.00  Aligned_cols=180  Identities=22%  Similarity=0.385  Sum_probs=150.6

Q ss_pred             CcCCC-CCHHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEE
Q 010713            1 MKFYE-GSVGDRMAQLKG--------------GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG   65 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~--------------~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~   65 (503)
                      |||++ |+|.+++.....              ..+++.+++.++.|++.||+|||++|++|+||||+||++++++.++|+
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~  166 (283)
T cd05048          87 FEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKIS  166 (283)
T ss_pred             EecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEEEC
Confidence            68888 599999975321              568899999999999999999999999999999999999999999999


Q ss_pred             ecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc
Q 010713           66 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR  144 (503)
Q Consensus        66 DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~  144 (503)
                      |||++........ ........+++.|+|||.+.+.   .++.++|+|||||++|||++ |..||.+....+....+.. 
T Consensus       167 dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~-  241 (283)
T cd05048         167 DFGLSRDIYSADY-YRVQSKSLLPVRWMPPEAILYG---KFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRS-  241 (283)
T ss_pred             CCcceeecccccc-ccccCCCcccccccCHHHhccC---cCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc-
Confidence            9999875432211 1122344567889999998743   67899999999999999998 9999998888777766654 


Q ss_pred             cCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHh
Q 010713          145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  185 (503)
Q Consensus       145 ~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~  185 (503)
                      ...+..+..++.++.+|+.+||+.||.+||++.++++.|++
T Consensus       242 ~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         242 RQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             CCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence            34455678899999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.96  E-value=8.6e-29  Score=242.94  Aligned_cols=179  Identities=19%  Similarity=0.285  Sum_probs=149.1

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.  ....+++..+..++.|++.||+|||++||+||||||.||+++.++.++|+|||++.........
T Consensus        74 ~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~  151 (257)
T cd05116          74 MELAELGPLNKFLQ--KNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY  151 (257)
T ss_pred             EecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCe
Confidence            68888 58999986  3457999999999999999999999999999999999999999999999999998765432211


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........++..|+|||.+..   ..++.++|+|||||++|||++ |..||......+....+.. ...++.+..+++++
T Consensus       152 ~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~-~~~~~~~~~~~~~l  227 (257)
T cd05116         152 YKAKTHGKWPVKWYAPECMNY---YKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIES-GERMECPQRCPPEM  227 (257)
T ss_pred             eeecCCCCCCccccCHhHhcc---CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHC-CCCCCCCCCCCHHH
Confidence            111122334578999999864   357889999999999999998 9999988877777666544 34566778899999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHh
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKS  185 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~  185 (503)
                      .++|.+||+.||++||++.+|.+.|+.
T Consensus       228 ~~li~~~~~~~p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         228 YDLMKLCWTYGVDERPGFAVVELRLRN  254 (257)
T ss_pred             HHHHHHHhccCchhCcCHHHHHHHHhc
Confidence            999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.96  E-value=3.6e-29  Score=267.27  Aligned_cols=181  Identities=24%  Similarity=0.322  Sum_probs=147.4

Q ss_pred             CcCCCCCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC-cEEEEecCCcccccCCC
Q 010713            1 MKFYEGSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD-RAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~GSL~d~L~~~--~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~-~vKL~DFGla~~~~~~~   77 (503)
                      |||++++|.+++...  ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||+++..... 
T Consensus       146 mE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~-  224 (440)
T PTZ00036        146 MEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAG-  224 (440)
T ss_pred             EecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchhccCC-
Confidence            799999998888643  356799999999999999999999999999999999999998665 6999999999765431 


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC---------
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP---------  148 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~---------  148 (503)
                         .......+|+.|+|||++.+.  ..++.++|||||||++|+|++|.+||.+.+..+.+..+......+         
T Consensus       225 ---~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  299 (440)
T PTZ00036        225 ---QRSVSYICSRFYRAPELMLGA--TNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMN  299 (440)
T ss_pred             ---CCcccCCCCcCccCHHHhcCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhc
Confidence               222345789999999998643  257899999999999999999999999877666555544321111         


Q ss_pred             ------------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          149 ------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       149 ------------------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                                        .++...++++.+||.+||.+||.+|||+.|+++      |+|+..
T Consensus       300 ~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~------hp~f~~  356 (440)
T PTZ00036        300 PNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA------DPFFDD  356 (440)
T ss_pred             hhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC------ChhHHh
Confidence                              123457789999999999999999999999998      777654

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.96  E-value=4.2e-29  Score=258.66  Aligned_cols=194  Identities=23%  Similarity=0.337  Sum_probs=157.3

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+| +|.+++.  ..+.+++..+..++.|++.||+|||++||+||||||+|||++.++.++|+|||++.........
T Consensus        80 ~E~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~  157 (360)
T cd05627          80 MEFLPGGDMMTLLM--KKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRT  157 (360)
T ss_pred             EeCCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCccccccccc
Confidence            799985 8999986  4567999999999999999999999999999999999999999999999999998654221100


Q ss_pred             --------------------------------CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCC
Q 010713           80 --------------------------------SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ  127 (503)
Q Consensus        80 --------------------------------~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~  127 (503)
                                                      .......+||+.|+|||++.+.   .++.++|+|||||++|+|++|..
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~---~~~~~~DiwSlGvilyel~tG~~  234 (360)
T cd05627         158 EFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQT---GYNKLCDWWSLGVIMYEMLIGYP  234 (360)
T ss_pred             ccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCC---CCCCcceeccccceeeecccCCC
Confidence                                            0011235799999999999754   68889999999999999999999


Q ss_pred             CCCCCChHHHHHHHHhccCCCCCCC--CCcHHHHHHHHHhhhcCCCCCCC---HHHHHHHHHhhccCcCCCCCCCCCCCc
Q 010713          128 PRCGRSVDEIYDAVVRRQEIPPIPS--GLPPAVENVLLGCFEYDLRSRPL---MTDILRVFKSSQNSVHSDGGWTGHGSR  202 (503)
Q Consensus       128 Pf~~~~~~e~~~~i~~~~~~~~~~~--~~s~~l~~LI~~cL~~DP~~RPS---~~elL~~L~~i~~~~~~~~~w~~~~~~  202 (503)
                      ||.+.+..+.+..+........++.  .+++++++||.+|+. ||.+|++   +.++++      |+|+.+.+|..+...
T Consensus       235 Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~------hp~f~~~~~~~~~~~  307 (360)
T cd05627         235 PFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKS------HPFFEGVDWGHIRER  307 (360)
T ss_pred             CCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhc------CCCCCCCCHHHHhcC
Confidence            9999888888777765443333443  478999999999874 9999985   677776      999999999887655


Q ss_pred             CCCC
Q 010713          203 ILPD  206 (503)
Q Consensus       203 ~~~~  206 (503)
                      ..+.
T Consensus       308 ~~~~  311 (360)
T cd05627         308 PAAI  311 (360)
T ss_pred             CCCC
Confidence            4433

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.96  E-value=1.1e-28  Score=257.66  Aligned_cols=199  Identities=19%  Similarity=0.299  Sum_probs=158.7

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+ |+|.+++.   ...+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......  
T Consensus       122 ~Ey~~gg~L~~~l~---~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~--  196 (370)
T cd05621         122 MEYMPGGDLVNLMS---NYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG--  196 (370)
T ss_pred             EcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCC--
Confidence            79998 59999885   3468999999999999999999999999999999999999999999999999987653211  


Q ss_pred             CCCCCCccCCCCCCCccccCCCC-CCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCC--CCcH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEV-RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS--GLPP  156 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~-~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~--~~s~  156 (503)
                      ........||+.|+|||++.+.. ...++.++|+|||||++|+|++|..||...+....+..+........++.  .++.
T Consensus       197 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~  276 (370)
T cd05621         197 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISK  276 (370)
T ss_pred             ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCH
Confidence            11223567999999999987532 22477899999999999999999999999888888877776544444443  5689


Q ss_pred             HHHHHHHHhhhcCCCC--CCCHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCC
Q 010713          157 AVENVLLGCFEYDLRS--RPLMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSS  210 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~--RPS~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~  210 (503)
                      .++++|.+||..++.+  |+++.++++      |+|+....|.........+|..|
T Consensus       277 ~~~~li~~~L~~~~~r~~R~~~~e~l~------hp~~~~~~~~~~~~~~~~~~~~p  326 (370)
T cd05621         277 HAKNLICAFLTDREVRLGRNGVEEIKQ------HPFFKNDQWNWDNIRETAAPVVP  326 (370)
T ss_pred             HHHHHHHHHccCchhccCCCCHHHHhc------CcccCCCCcChHhcCCCCCCcCC
Confidence            9999999999855543  889999988      99998776654433334444443

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.96  E-value=6e-29  Score=250.71  Aligned_cols=183  Identities=21%  Similarity=0.298  Sum_probs=143.8

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++++|.+++.. ..+.+++.++..++.||+.||+|||++||+||||||+||+++.++.+||+|||++.....   ..
T Consensus        82 ~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~---~~  157 (303)
T cd07869          82 FEYVHTDLCQYMDK-HPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSV---PS  157 (303)
T ss_pred             EECCCcCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccC---CC
Confidence            79999999999875 346789999999999999999999999999999999999999999999999999865422   12


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHhccCCCC----------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV-DEIYDAVVRRQEIPP----------  149 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-~e~~~~i~~~~~~~~----------  149 (503)
                      .......+++.|+|||++.+.  ..++.++|+|||||++|+|++|..||.+... .+....+......+.          
T Consensus       158 ~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (303)
T cd07869         158 HTYSNEVVTLWYRPPDVLLGS--TEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSL  235 (303)
T ss_pred             ccCCCCcccCCCCChHHHcCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhc
Confidence            223345789999999998643  2478899999999999999999999987533 222222221100000          


Q ss_pred             -----------CC---------CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCC
Q 010713          150 -----------IP---------SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGG  195 (503)
Q Consensus       150 -----------~~---------~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~  195 (503)
                                 .+         ..+++.+.+||.+||+.||++|||+.++++      |+|+....
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~------h~~f~~~~  295 (303)
T cd07869         236 PHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS------HEYFSDLP  295 (303)
T ss_pred             cccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc------CcccccCC
Confidence                       00         124578899999999999999999999998      88887654

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.96  E-value=8.1e-30  Score=269.26  Aligned_cols=186  Identities=28%  Similarity=0.440  Sum_probs=157.0

Q ss_pred             cCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            2 KFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         2 Ey~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      -+|+| +|+.+++. ...+|...+.+.|++||++|+.|||.++|||||||..||++.+++.|||+|||++...... ...
T Consensus       467 qwCeGsSLY~hlHv-~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w-~g~  544 (678)
T KOG0193|consen  467 QWCEGSSLYTHLHV-QETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRW-SGE  544 (678)
T ss_pred             hhccCchhhhhccc-hhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeee-ccc
Confidence            37898 89999975 5678999999999999999999999999999999999999999999999999998654322 123


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC---CCCCCcHH
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP---IPSGLPPA  157 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~---~~~~~s~~  157 (503)
                      .......|...|||||+++.+...+|++.+||||||+++|||+||..||.....++++-.+-.+...+.   ....++++
T Consensus       545 ~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~  624 (678)
T KOG0193|consen  545 QQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKA  624 (678)
T ss_pred             cccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhhccCHHH
Confidence            344556788899999999977788999999999999999999999999996666666555544432332   34678899


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          158 VENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      +++|+..||.+++++||.+.+|+..|+.+...
T Consensus       625 mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~  656 (678)
T KOG0193|consen  625 MKRLLSDCWKFDREERPLFPQLLSKLEELLPS  656 (678)
T ss_pred             HHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence            99999999999999999999999988887653

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.96  E-value=1.2e-28  Score=245.57  Aligned_cols=175  Identities=18%  Similarity=0.238  Sum_probs=139.8

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||+++++.+.+.. ....+++..++.++.|++.||+|||+++|+||||||+||+++.++.+||+|||++.......  .
T Consensus        79 ~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--~  155 (287)
T cd07848          79 FEYVEKNMLELLEE-MPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS--N  155 (287)
T ss_pred             EecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccc--c
Confidence            79999877776654 34679999999999999999999999999999999999999999999999999987653321  1


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC-------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-------------  147 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~-------------  147 (503)
                      .......|++.|+|||++.+.   .++.++|+|||||++|+|++|+.||.+.+..+....+......             
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~---~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (287)
T cd07848         156 ANYTEYVATRWYRSPELLLGA---PYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNP  232 (287)
T ss_pred             ccccccccccccCCcHHHcCC---CCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccc
Confidence            122345789999999999754   5788999999999999999999999886654433332211000             


Q ss_pred             -------C----------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          148 -------P----------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       148 -------~----------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                             +          .....++..+.+||.+||+.||++|||+.++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         233 RFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             hhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence                   0          011236788999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.96  E-value=1.5e-28  Score=251.86  Aligned_cols=191  Identities=20%  Similarity=0.308  Sum_probs=154.3

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.. ....+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++.......  
T Consensus        80 ~Ey~~gg~L~~~l~~-~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~--  156 (331)
T cd05624          80 MDYYVGGDLLTLLSK-FEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG--  156 (331)
T ss_pred             EeCCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCC--
Confidence            79998 599999974 34679999999999999999999999999999999999999999999999999987653311  


Q ss_pred             CCCCCCccCCCCCCCccccCCCC--CCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCC---CCC
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP---SGL  154 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~--~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~---~~~  154 (503)
                      ........|++.|+|||++.+..  .+.++.++|+|||||++|+|++|+.||...+..+.+..+.......+++   ..+
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~  236 (331)
T cd05624         157 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDV  236 (331)
T ss_pred             ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccC
Confidence            11122357999999999986421  1357789999999999999999999999888877777776544333333   456


Q ss_pred             cHHHHHHHHHhhhcCCCC--CCCHHHHHHHHHhhccCcCCCCCCCCCC
Q 010713          155 PPAVENVLLGCFEYDLRS--RPLMTDILRVFKSSQNSVHSDGGWTGHG  200 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~--RPS~~elL~~L~~i~~~~~~~~~w~~~~  200 (503)
                      +.+++++|.+||..++++  |+++.++++      ++|+...+|....
T Consensus       237 ~~~~~~li~~ll~~~~~~~~~~~~~~~~~------h~~f~~~~~~~~~  278 (331)
T cd05624         237 SEEAKDLIQRLICSRERRLGQNGIEDFKK------HAFFEGIDWENIR  278 (331)
T ss_pred             CHHHHHHHHHHccCchhhcCCCCHHHHhc------CCCcCCCCHHHHh
Confidence            899999999999876544  468888887      8999998887764

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.96  E-value=2.2e-28  Score=248.20  Aligned_cols=186  Identities=18%  Similarity=0.326  Sum_probs=151.5

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.. ....++...++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++........ 
T Consensus        87 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-  164 (316)
T cd05108          87 TQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEK-  164 (316)
T ss_pred             eecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCCCc-
Confidence            57777 699999975 345689999999999999999999999999999999999999999999999999986543211 


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      .........+..|+|||++.+.   .++.++||||||+++|+|++ |..||.+....+... +.......+.+..++..+
T Consensus       165 ~~~~~~~~~~~~y~apE~~~~~---~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  240 (316)
T cd05108         165 EYHAEGGKVPIKWMALESILHR---IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS-ILEKGERLPQPPICTIDV  240 (316)
T ss_pred             ceeccCCccceeecChHHhccC---CCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHH-HHhCCCCCCCCCCCCHHH
Confidence            1111223346689999998743   68899999999999999998 999998877666544 344444555667789999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      .+++.+||..+|.+||++.+++..|..+......
T Consensus       241 ~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~~~  274 (316)
T cd05108         241 YMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR  274 (316)
T ss_pred             HHHHHHHccCChhhCcCHHHHHHHHHHHHcCCch
Confidence            9999999999999999999999999888665433

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.96  E-value=9e-29  Score=247.74  Aligned_cols=196  Identities=19%  Similarity=0.340  Sum_probs=157.6

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.......+++.++..++.|++.||.|||+.+|+|+||||+||+++.++.++|+|||++.....    
T Consensus        79 ~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~----  154 (285)
T cd05630          79 LTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE----  154 (285)
T ss_pred             EEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCC----
Confidence            78987 5899988755556799999999999999999999999999999999999999999999999999865432    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHhccCCCCCCCCCcH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD---EIYDAVVRRQEIPPIPSGLPP  156 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~---e~~~~i~~~~~~~~~~~~~s~  156 (503)
                      ........|+..|+|||++.+.   .++.++|+||||+++|+|++|..||......   +....... ......+..+++
T Consensus       155 ~~~~~~~~g~~~y~aPE~~~~~---~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  230 (285)
T cd05630         155 GQTIKGRVGTVGYMAPEVVKNE---RYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK-EVQEEYSEKFSP  230 (285)
T ss_pred             CccccCCCCCccccChHHHcCC---CCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhh-hhhhhcCccCCH
Confidence            1122345789999999999743   6889999999999999999999999864422   22222211 122335667899


Q ss_pred             HHHHHHHHhhhcCCCCCCC-----HHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCC
Q 010713          157 AVENVLLGCFEYDLRSRPL-----MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSS  210 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~RPS-----~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~  210 (503)
                      ++.+|+.+||+.||++|||     +.|+++      ++|+...+|........++|..|
T Consensus       231 ~~~~li~~~l~~~p~~R~s~~~~~~~~~~~------h~~~~~~~~~~~~~~~~~~~~~~  283 (285)
T cd05630         231 DARSLCKMLLCKDPKERLGCQGGGAREVKE------HPLFKQINFKRLEAGMLEPPFKP  283 (285)
T ss_pred             HHHHHHHHHhhcCHHHccCCCCCchHHHHc------ChhhhccCHHHHhcCCCCCCCCC
Confidence            9999999999999999999     889988      88988888876666556665554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.96  E-value=2.8e-28  Score=240.06  Aligned_cols=180  Identities=20%  Similarity=0.393  Sum_probs=150.3

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.......+++..++.++.|++.||+|||+++++|+||||+||++++++.++|+|||++.........
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~  160 (263)
T cd05052          81 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT  160 (263)
T ss_pred             EEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceee
Confidence            68887 59999997645567899999999999999999999999999999999999999999999999998765432111


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                        .......+..|+|||.+.+.   .++.++|+|||||++|+|++ |..||.+....+....+.. ...+..+..++..+
T Consensus       161 --~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  234 (263)
T cd05052         161 --AHAGAKFPIKWTAPESLAYN---KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-GYRMERPEGCPPKV  234 (263)
T ss_pred             --ccCCCCCccccCCHHHhccC---CCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-CCCCCCCCCCCHHH
Confidence              11122345679999998743   67889999999999999998 9999988877776666543 33456678899999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhh
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSS  186 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i  186 (503)
                      .++|.+||+.||++||++.++++.|+.+
T Consensus       235 ~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         235 YELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             HHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence            9999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.96  E-value=2.4e-29  Score=257.96  Aligned_cols=199  Identities=20%  Similarity=0.306  Sum_probs=169.6

Q ss_pred             cCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            2 KFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         2 Ey~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      ..++ |+|.-.|.+..+..++++.++.|+.+|+.||++||+.+|++|||||+|||+|+.|+++|+|+|+|..+..    .
T Consensus       265 tlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~----g  340 (591)
T KOG0986|consen  265 TLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPE----G  340 (591)
T ss_pred             EeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCC----C
Confidence            4567 4888888877777899999999999999999999999999999999999999999999999999988765    3


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHhccCCCCCCCCCcH
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD----EIYDAVVRRQEIPPIPSGLPP  156 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~----e~~~~i~~~~~~~~~~~~~s~  156 (503)
                      ......+||.+|||||++.+.   .|+++.|.|||||+||||+.|+.||......    ++-..+..  ....++..+++
T Consensus       341 ~~~~~rvGT~GYMAPEvl~ne---~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~--~~~ey~~kFS~  415 (591)
T KOG0986|consen  341 KPIRGRVGTVGYMAPEVLQNE---VYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLE--DPEEYSDKFSE  415 (591)
T ss_pred             CccccccCcccccCHHHHcCC---cccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhc--chhhcccccCH
Confidence            344566999999999999965   5999999999999999999999999764332    33333332  34456789999


Q ss_pred             HHHHHHHHhhhcCCCCCC-----CHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCCccc
Q 010713          157 AVENVLLGCFEYDLRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGYTEW  215 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~RP-----S~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~~~~  215 (503)
                      ++++|.+.+|..||.+|.     .+.++.+      |++|.+.+|..+....++||..|.....
T Consensus       416 eakslc~~LL~Kdp~~RLGcrg~ga~evk~------HpfFk~lnw~rleagml~PPfiPdp~aV  473 (591)
T KOG0986|consen  416 EAKSLCEGLLTKDPEKRLGCRGEGAQEVKE------HPFFKDLNWRRLEAGMLEPPFIPDPGAV  473 (591)
T ss_pred             HHHHHHHHHHccCHHHhccCCCcCcchhhh------CcccccCCHhHHhccCCCCCCCCCcccc
Confidence            999999999999999997     4567776      9999999999999999999998875443

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.96  E-value=1.4e-29  Score=264.74  Aligned_cols=177  Identities=28%  Similarity=0.387  Sum_probs=157.8

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||. |-|++.|+  ....+.......|..+|+.|++|||.+.|||||||.-||||..+..+||+|||.++....    
T Consensus       191 MEfCa~GqL~~VLk--a~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~----  264 (904)
T KOG4721|consen  191 MEFCAQGQLYEVLK--AGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSD----  264 (904)
T ss_pred             eeccccccHHHHHh--ccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhh----
Confidence            99999 89999997  677899999999999999999999999999999999999999999999999999887654    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ......+.||..|||||++.++   +.+.|+||||||++|||||||..||.+-+...++--+-......+.|..++..++
T Consensus       265 ~STkMSFaGTVaWMAPEvIrne---PcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~Gfk  341 (904)
T KOG4721|consen  265 KSTKMSFAGTVAWMAPEVIRNE---PCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFK  341 (904)
T ss_pred             hhhhhhhhhhHhhhCHHHhhcC---CcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCchHHH
Confidence            2345578999999999999965   7899999999999999999999999887666555545455566788999999999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHHHHHhh
Q 010713          160 NVLLGCFEYDLRSRPLMTDILRVFKSS  186 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~~L~~i  186 (503)
                      -||++||+..|.+||++.+|+..|+-.
T Consensus       342 lL~Kqcw~sKpRNRPSFrqil~HldIa  368 (904)
T KOG4721|consen  342 LLLKQCWNSKPRNRPSFRQILLHLDIA  368 (904)
T ss_pred             HHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence            999999999999999999999877644

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=2.6e-28  Score=239.14  Aligned_cols=176  Identities=27%  Similarity=0.442  Sum_probs=148.4

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.  ....+++..+..++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||++.........
T Consensus        83 ~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~  160 (263)
T cd06625          83 MEYMPGGSVKDQLK--AYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSS  160 (263)
T ss_pred             EEECCCCcHHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceeccccccc
Confidence            588875 8999886  3467899999999999999999999999999999999999999999999999998765332111


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........++..|+|||.+.+.   .++.++|+||||+++|+|++|+.||...+.......+........++..++..+.
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (263)
T cd06625         161 GTGMKSVTGTPYWMSPEVISGE---GYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDAR  237 (263)
T ss_pred             cccccCCCcCccccCcceeccC---CCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCCccCCHHHH
Confidence            1111345678899999999854   5788999999999999999999999887666666666555556667888999999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 010713          160 NVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ++|.+||..+|.+||++.++++
T Consensus       238 ~li~~~l~~~p~~Rpt~~~ll~  259 (263)
T cd06625         238 NFLRRTFVENAKKRPSAEELLR  259 (263)
T ss_pred             HHHHHHhhcCcccCCCHHHHhh
Confidence            9999999999999999999998

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.96  E-value=8.8e-29  Score=257.58  Aligned_cols=188  Identities=20%  Similarity=0.246  Sum_probs=152.2

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCC--
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP--   77 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~--   77 (503)
                      ||||+ |+|.+++.  ..+.+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++..+....  
T Consensus        80 ~E~~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~  157 (376)
T cd05598          80 MDYIPGGDMMSLLI--RLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS  157 (376)
T ss_pred             EeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccc
Confidence            79998 59999996  45678999999999999999999999999999999999999999999999999975321000  


Q ss_pred             --------------------------------------CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHH
Q 010713           78 --------------------------------------LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI  119 (503)
Q Consensus        78 --------------------------------------~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviL  119 (503)
                                                            .........+||+.|+|||++.+.   .++.++|||||||++
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlGvil  234 (376)
T cd05598         158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRT---GYTQLCDWWSVGVIL  234 (376)
T ss_pred             cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCC---CCCcceeeeecccee
Confidence                                                  000011234799999999999754   678999999999999


Q ss_pred             HHHHhCCCCCCCCChHHHHHHHHhccCCCCCC--CCCcHHHHHHHHHhhhcCCCCCC---CHHHHHHHHHhhccCcCCCC
Q 010713          120 IEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDLRSRP---LMTDILRVFKSSQNSVHSDG  194 (503)
Q Consensus       120 yeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~--~~~s~~l~~LI~~cL~~DP~~RP---S~~elL~~L~~i~~~~~~~~  194 (503)
                      |+|++|..||.+....+....+........++  ..+++++.++|.+|+ .+|.+|+   ++.++++      ++|+...
T Consensus       235 yell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~------h~~~~~~  307 (376)
T cd05598         235 YEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKA------HPFFKGI  307 (376)
T ss_pred             eehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC------CCCcCCC
Confidence            99999999999888777666665433333333  468899999999977 5999999   8999988      9999888


Q ss_pred             CCCCCC
Q 010713          195 GWTGHG  200 (503)
Q Consensus       195 ~w~~~~  200 (503)
                      +|....
T Consensus       308 ~~~~~~  313 (376)
T cd05598         308 DFASLI  313 (376)
T ss_pred             CHHHHh
Confidence            876654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=4.6e-29  Score=258.48  Aligned_cols=201  Identities=22%  Similarity=0.288  Sum_probs=182.8

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||-|- |.|...|.  ..+.++...+..|+..+++|++|||++|||+|||||+|.+++.+|.+||.|||+|+.+..    
T Consensus       499 mEaClGGElWTiLr--dRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~----  572 (732)
T KOG0614|consen  499 MEACLGGELWTILR--DRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS----  572 (732)
T ss_pred             HHhhcCchhhhhhh--hcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhcc----
Confidence            45554 68888886  678999999999999999999999999999999999999999999999999999998765    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      .....+++|||.|.|||++.+.   ..+.++|.||||+++|||++|.+||.+.++...|+.|+.+-....+|..++....
T Consensus       573 g~KTwTFcGTpEYVAPEIILnK---GHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~  649 (732)
T KOG0614|consen  573 GRKTWTFCGTPEYVAPEIILNK---GHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRRITKTAT  649 (732)
T ss_pred             CCceeeecCCcccccchhhhcc---CcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccccchhHH
Confidence            4456789999999999999854   5788999999999999999999999999999999999999888999999999999


Q ss_pred             HHHHHhhhcCCCCCCC-----HHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCCcccc
Q 010713          160 NVLLGCFEYDLRSRPL-----MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGYTEWF  216 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS-----~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~~~~~  216 (503)
                      +||+++...+|.+|..     +.+|.+      |.||.+.+|..+..+.+++|..+...+|.
T Consensus       650 ~Lik~LCr~~P~ERLG~~~~gI~DIkk------H~Wf~gfdweglr~~~L~pPi~~~va~pt  705 (732)
T KOG0614|consen  650 DLIKKLCRDNPTERLGYQKGGINDIKK------HRWFEGFDWEGLRSRTLPPPIIPSVANPT  705 (732)
T ss_pred             HHHHHHHhcCcHhhhccccCChHHHHh------hhhhhcCChhhhhhccCCCCccccCCCcc
Confidence            9999999999999975     677766      99999999999999999999988766554

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=1.3e-28  Score=255.82  Aligned_cols=181  Identities=18%  Similarity=0.307  Sum_probs=157.2

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      +||++-+|.-++.. ..-.|++.++..|+.||+.||+|||++||+|||||.+|||||.+|.+||+|||+|+++....  .
T Consensus       197 FeYMdhDL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~--~  273 (560)
T KOG0600|consen  197 FEYMDHDLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG--S  273 (560)
T ss_pred             EecccchhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCC--C
Confidence            69999999988864 56689999999999999999999999999999999999999999999999999999875432  3


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC--------C--
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--------I--  150 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~--------~--  150 (503)
                      ...+..+-|..|.|||.+.+..  .|+.+.|+||.||||.||++|++.|.+.+..+++..|......|.        +  
T Consensus       274 ~~~T~rVvTLWYRpPELLLG~t--~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~  351 (560)
T KOG0600|consen  274 APYTSRVVTLWYRPPELLLGAT--SYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPH  351 (560)
T ss_pred             cccccceEEeeccChHHhcCCc--ccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCc
Confidence            3466788899999999999864  799999999999999999999999999999998888876333221        1  


Q ss_pred             -----------------CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          151 -----------------PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       151 -----------------~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                                       ...+++...+|+..+|..||.+|.|+.++|+      +.+|.
T Consensus       352 ~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~------seyF~  404 (560)
T KOG0600|consen  352 ATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ------SEYFT  404 (560)
T ss_pred             ccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc------Ccccc
Confidence                             1346788899999999999999999999998      77763

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.96  E-value=3.7e-28  Score=242.92  Aligned_cols=191  Identities=19%  Similarity=0.358  Sum_probs=157.5

Q ss_pred             CcCCC-CCHHHHHHhhc--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcc
Q 010713            1 MKFYE-GSVGDRMAQLK--------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH   71 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~--------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~   71 (503)
                      |||++ |+|.+++....        ...++...++.++.|++.||.|||+++|+||||||+||+++.++.++|+|||+++
T Consensus        88 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~  167 (288)
T cd05061          88 MELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR  167 (288)
T ss_pred             EeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCccc
Confidence            78998 69999997532        1345677899999999999999999999999999999999999999999999987


Q ss_pred             cccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCC
Q 010713           72 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI  150 (503)
Q Consensus        72 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~  150 (503)
                      ........ .......++..|+|||.+.+.   .++.++|+|||||++|+|++ |..||.+....+....+.. ......
T Consensus       168 ~~~~~~~~-~~~~~~~~~~~y~~pE~~~~~---~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~-~~~~~~  242 (288)
T cd05061         168 DIYETDYY-RKGGKGLLPVRWMAPESLKDG---VFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD-GGYLDQ  242 (288)
T ss_pred             cccccccc-cccCCCcccccccCHHHhccC---CCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCCCCC
Confidence            54332111 111223456789999998743   67889999999999999998 7899988887776665544 334455


Q ss_pred             CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCC
Q 010713          151 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGW  196 (503)
Q Consensus       151 ~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w  196 (503)
                      +..+++.+.+++.+||+.||++|||+.++++.|+...++++.+.+|
T Consensus       243 ~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~~  288 (288)
T cd05061         243 PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF  288 (288)
T ss_pred             CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCCC
Confidence            6778899999999999999999999999999999999999999887

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.96  E-value=3.2e-28  Score=254.32  Aligned_cols=198  Identities=20%  Similarity=0.238  Sum_probs=154.5

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCC-
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL-   78 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~-   78 (503)
                      ||||+ |+|.+++.  ....+++..+..++.||+.||+|||++||+||||||+|||++.+++++|+|||++........ 
T Consensus        80 ~E~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~  157 (381)
T cd05626          80 MDYIPGGDMMSLLI--RMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNS  157 (381)
T ss_pred             EecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccc
Confidence            79998 49999986  456799999999999999999999999999999999999999999999999998753311000 


Q ss_pred             -------------------------------------------CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHH
Q 010713           79 -------------------------------------------PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGF  115 (503)
Q Consensus        79 -------------------------------------------~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSL  115 (503)
                                                                 .........||+.|+|||++.+.   .++.++|||||
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~~~~~DiwSl  234 (381)
T cd05626         158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRK---GYTQLCDWWSV  234 (381)
T ss_pred             ccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCC---CCCCccceeeh
Confidence                                                       00001235799999999999743   57899999999


Q ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCC--CCCcHHHHHHHHHhh--hcCCCCCCCHHHHHHHHHhhccCcC
Q 010713          116 ACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGLPPAVENVLLGCF--EYDLRSRPLMTDILRVFKSSQNSVH  191 (503)
Q Consensus       116 GviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~--~~~s~~l~~LI~~cL--~~DP~~RPS~~elL~~L~~i~~~~~  191 (503)
                      ||++|||++|..||...+..+....+........++  ..+++++.+||.+|+  ..++..|+++.++++      |+|+
T Consensus       235 G~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~------hp~f  308 (381)
T cd05626         235 GVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKA------HPFF  308 (381)
T ss_pred             hhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhc------Cccc
Confidence            999999999999999877766666655433333333  368999999999954  556666999999998      9999


Q ss_pred             CCCCCCCCCCcCCCCCCCC
Q 010713          192 SDGGWTGHGSRILPDKSSS  210 (503)
Q Consensus       192 ~~~~w~~~~~~~~~~p~~~  210 (503)
                      ...+|..... ..++|..|
T Consensus       309 ~~~~~~~~~~-~~~~~~~p  326 (381)
T cd05626         309 SEVDFSSDIR-TQPAPYVP  326 (381)
T ss_pred             CCCChhHHhh-cCCCCccC
Confidence            9988876432 23344444

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.96  E-value=7.2e-29  Score=238.08  Aligned_cols=177  Identities=18%  Similarity=0.290  Sum_probs=151.7

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC---CcEEEEecCCcccccCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA---DRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~---~~vKL~DFGla~~~~~~   76 (503)
                      +|+++| +|..-+-  ....+++..+-.+++||++||.|+|.+||+|||+||+|+++.+.   .-+||+|||+|....+ 
T Consensus        89 Fe~m~G~dl~~eIV--~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~-  165 (355)
T KOG0033|consen   89 FDLVTGGELFEDIV--AREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND-  165 (355)
T ss_pred             EecccchHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCC-
Confidence            477786 6665554  33668999999999999999999999999999999999999543   4689999999988753 


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC--CCCCCC
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP--PIPSGL  154 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~--~~~~~~  154 (503)
                         ......+.|||.|||||++...   +|+..+|||+-|++||-|+.|.+||.+.+...+++.|.......  +..+.+
T Consensus       166 ---g~~~~G~~GtP~fmaPEvvrkd---py~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~i  239 (355)
T KOG0033|consen  166 ---GEAWHGFAGTPGYLSPEVLKKD---PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTV  239 (355)
T ss_pred             ---ccccccccCCCcccCHHHhhcC---CCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcC
Confidence               3344577899999999999844   89999999999999999999999999999999999998765443  345789


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      +++.++||++||..||.+|.|+.|.|+      |+|..
T Consensus       240 s~~Ak~LvrrML~~dP~kRIta~EAL~------HpWi~  271 (355)
T KOG0033|consen  240 TPEAKSLIRRMLTVNPKKRITADEALK------HPWIC  271 (355)
T ss_pred             CHHHHHHHHHHhccChhhhccHHHHhC------Cchhc
Confidence            999999999999999999999999988      66644

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.96  E-value=3.3e-28  Score=239.58  Aligned_cols=181  Identities=18%  Similarity=0.293  Sum_probs=149.0

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.. ....+++.+++.++.|++.||+|||++|++|+||||+||+++.++.++|+|||++.........
T Consensus        73 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~  151 (257)
T cd05115          73 MEMASGGPLNKFLSG-KKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSY  151 (257)
T ss_pred             EEeCCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccc
Confidence            78998 589998864 3567999999999999999999999999999999999999999999999999998755332211


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........++..|+|||++...   .++.++|+||||+++|++++ |..||.+....+....+. ....+..+..+++++
T Consensus       152 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l  227 (257)
T cd05115         152 YKARSAGKWPLKWYAPECINFR---KFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIE-QGKRLDCPAECPPEM  227 (257)
T ss_pred             eeccCCCCCCcccCCHHHHccC---CCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHH-CCCCCCCCCCCCHHH
Confidence            1111222335789999998743   57889999999999999996 999999887777665554 344556778889999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhh
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSS  186 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i  186 (503)
                      .++|.+||..+|++||++.++.+.|+..
T Consensus       228 ~~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         228 YALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence            9999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.96  E-value=3.4e-28  Score=237.76  Aligned_cols=181  Identities=25%  Similarity=0.381  Sum_probs=151.6

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+.+.......+++..+..++.|++.||+|||++|++|+||||+||+++.++.+||+|||++.........
T Consensus        74 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~  153 (257)
T cd05040          74 TELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH  153 (257)
T ss_pred             EEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccc
Confidence            68887 59999997643357899999999999999999999999999999999999999999999999998776432211


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........++..|+|||++...   .++.++|+|||||++|+|++ |..||...+..+....+.........+..++..+
T Consensus       154 ~~~~~~~~~~~~y~~pE~~~~~---~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (257)
T cd05040         154 YVMEEHLKVPFAWCAPESLRTR---TFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDI  230 (257)
T ss_pred             eecccCCCCCceecCHHHhccc---CcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHH
Confidence            1122234567889999998743   57889999999999999998 9999988887777766665445555667789999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHH
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFK  184 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~  184 (503)
                      .+++.+||+.+|++||++.++++.|.
T Consensus       231 ~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         231 YNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             HHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            99999999999999999999999774

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.96  E-value=2.1e-28  Score=255.71  Aligned_cols=165  Identities=21%  Similarity=0.346  Sum_probs=135.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCCCCCCCccCCCCCCCcccc
Q 010713           19 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQW   98 (503)
Q Consensus        19 ~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l   98 (503)
                      .+++.++++++.||+.||+|||++||+||||||+|||++.++.++|+|||++........ ........++..|+|||++
T Consensus       208 ~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~-~~~~~~~~~~~~y~aPE~~  286 (374)
T cd05106         208 PLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN-YVVKGNARLPVKWMAPESI  286 (374)
T ss_pred             CcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc-eeeccCCCCccceeCHHHh
Confidence            578899999999999999999999999999999999999999999999999876532111 1111223355689999998


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHH
Q 010713           99 QPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMT  177 (503)
Q Consensus        99 ~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~  177 (503)
                      .+   ..++.++|||||||++|+|++ |..||..................+..+..+++++.++|.+||+.||++|||+.
T Consensus       287 ~~---~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~  363 (374)
T cd05106         287 FD---CVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFS  363 (374)
T ss_pred             cC---CCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence            74   368899999999999999997 99999876655555455554445556677899999999999999999999999


Q ss_pred             HHHHHHHhhc
Q 010713          178 DILRVFKSSQ  187 (503)
Q Consensus       178 elL~~L~~i~  187 (503)
                      ++++.|+++.
T Consensus       364 ~l~~~l~~~~  373 (374)
T cd05106         364 QISQLIQRQL  373 (374)
T ss_pred             HHHHHHHHHh
Confidence            9999998753

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.96  E-value=3.6e-28  Score=253.72  Aligned_cols=199  Identities=19%  Similarity=0.294  Sum_probs=156.3

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+ |+|.+++.   ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......  
T Consensus       122 ~Ey~~gg~L~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~--  196 (371)
T cd05622         122 MEYMPGGDLVNLMS---NYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--  196 (371)
T ss_pred             EcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCC--
Confidence            79998 58999885   3468999999999999999999999999999999999999999999999999987653311  


Q ss_pred             CCCCCCccCCCCCCCccccCCCC-CCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCC--CCCcH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEV-RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGLPP  156 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~-~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~--~~~s~  156 (503)
                      ........||+.|+|||++.+.. ...++.++|||||||++|+|++|..||...+....+..+........++  ..++.
T Consensus       197 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  276 (371)
T cd05622         197 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISK  276 (371)
T ss_pred             cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCH
Confidence            11223567999999999987532 2247889999999999999999999999988888888777644333333  46899


Q ss_pred             HHHHHHHHhhhcCCCC--CCCHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCC
Q 010713          157 AVENVLLGCFEYDLRS--RPLMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSS  210 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~--RPS~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~  210 (503)
                      .++++|.+||..++.+  |+++.++++      ++|+....|.....+...+|..|
T Consensus       277 ~~~~li~~~L~~~~~r~~r~~~~ei~~------h~~~~~~~~~~~~~~~~~~~~~~  326 (371)
T cd05622         277 EAKNLICAFLTDREVRLGRNGVEEIKR------HLFFKNDQWAWETLRDTVAPVVP  326 (371)
T ss_pred             HHHHHHHHHcCChhhhcCCCCHHHHhc------CcccCCCChhHHhcCCCCCCCCC
Confidence            9999999999844433  679999988      88887766543333333334333

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.96  E-value=2.3e-28  Score=244.54  Aligned_cols=197  Identities=20%  Similarity=0.339  Sum_probs=159.3

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.....    
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~----  154 (285)
T cd05632          79 LTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPE----  154 (285)
T ss_pred             EEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCC----
Confidence            688885 898888754556799999999999999999999999999999999999999999999999998865432    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--cCCCCCCCCCcHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR--QEIPPIPSGLPPA  157 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~--~~~~~~~~~~s~~  157 (503)
                      ........|+..|+|||.+.+.   .++.++|+||||+++|+|++|..||...........+...  .....++..++..
T Consensus       155 ~~~~~~~~g~~~~~aPE~~~~~---~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (285)
T cd05632         155 GESIRGRVGTVGYMAPEVLNNQ---RYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEE  231 (285)
T ss_pred             CCcccCCCCCcCccChHHhcCC---CCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHH
Confidence            1122345789999999999743   6788999999999999999999999876654433333221  1223456678999


Q ss_pred             HHHHHHHhhhcCCCCCCC-----HHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCC
Q 010713          158 VENVLLGCFEYDLRSRPL-----MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSS  210 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS-----~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~  210 (503)
                      +.+|+.+||+.||++||+     +.++++      ++++....|.........++..|
T Consensus       232 ~~~li~~~l~~~P~~R~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~~~  283 (285)
T cd05632         232 AKSICKMLLTKDPKQRLGCQEEGAGEVKR------HPFFRNMNFKRLEAGMLDPPFVP  283 (285)
T ss_pred             HHHHHHHHccCCHhHcCCCcccChHHHHc------ChhhhcCCHHHHhcCcCCCCCCC
Confidence            999999999999999999     667777      88888888877766666666654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.96  E-value=3.5e-28  Score=252.00  Aligned_cols=175  Identities=19%  Similarity=0.232  Sum_probs=143.2

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++++|.+.+.    ..++...+..++.|++.||+|||++||+||||||+||+++.++.+||+|||++.....    .
T Consensus       108 ~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~----~  179 (364)
T cd07875         108 MELMDANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----S  179 (364)
T ss_pred             EeCCCCCHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCC----C
Confidence            7999999988884    2488999999999999999999999999999999999999999999999999976432    1


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------  148 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~------------  148 (503)
                      .......+|+.|+|||++.+.   .++.++|||||||++|+|++|+.||.+.+..+.+..+......+            
T Consensus       180 ~~~~~~~~t~~y~aPE~~~~~---~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (364)
T cd07875         180 FMMTPYVVTRYYRAPEVILGM---GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV  256 (364)
T ss_pred             CcccCCcccCCcCCHHHHhCC---CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHH
Confidence            222345789999999999754   67889999999999999999999998877666555544321110            


Q ss_pred             ----------------------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          149 ----------------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       149 ----------------------------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                                                  ......+..+++||.+||+.||.+|||+.++++      ++|+.
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~------hp~~~  322 (364)
T cd07875         257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ------HPYIN  322 (364)
T ss_pred             HHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc------Ccccc
Confidence                                        001123467899999999999999999999998      87775

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.96  E-value=3.3e-28  Score=251.72  Aligned_cols=175  Identities=19%  Similarity=0.238  Sum_probs=140.6

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++++|.+.+.    ..+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++.....    .
T Consensus       105 ~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~----~  176 (359)
T cd07876         105 MELMDANLCQVIH----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACT----N  176 (359)
T ss_pred             EeCCCcCHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCcccccc----C
Confidence            7899999888774    3488999999999999999999999999999999999999999999999999875432    2


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC-------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-------------  147 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~-------------  147 (503)
                      .......+|+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.+....+..+......             
T Consensus       177 ~~~~~~~~t~~y~aPE~~~~~---~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (359)
T cd07876         177 FMMTPYVVTRYYRAPEVILGM---GYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTV  253 (359)
T ss_pred             ccCCCCcccCCCCCchhccCC---CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence            223345789999999999754   6788999999999999999999999876654433322211100             


Q ss_pred             -------C--------------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          148 -------P--------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       148 -------~--------------------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                             +                    ......++.+++||.+||..||++|||+.|+++      ++|+.
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~------hp~~~  319 (359)
T cd07876         254 RNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR------HPYIT  319 (359)
T ss_pred             HHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc------Cchhh
Confidence                   0                    011234678999999999999999999999998      77764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.96  E-value=2.2e-28  Score=243.45  Aligned_cols=181  Identities=22%  Similarity=0.272  Sum_probs=158.0

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      ||||+-+|..++... ..++...++..++.|+++||+|||.+.|+||||||+|+|++..|.+||+|||+|+.+..   +.
T Consensus       156 Me~~EhDLksl~d~m-~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygs---p~  231 (419)
T KOG0663|consen  156 MEYVEHDLKSLMETM-KQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGS---PL  231 (419)
T ss_pred             HHHHHhhHHHHHHhc-cCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcC---Cc
Confidence            899999999999874 47899999999999999999999999999999999999999999999999999998865   34


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC-----------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-----------  149 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~-----------  149 (503)
                      ...+..+-|..|.|||.+.+..  .|+.+.|+||+|||+.||+++.+.|.+.+..++.++|......|.           
T Consensus       232 k~~T~lVVTLWYRaPELLLG~~--tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp  309 (419)
T KOG0663|consen  232 KPYTPLVVTLWYRAPELLLGAK--TYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELP  309 (419)
T ss_pred             ccCcceEEEeeecCHHHhcCCc--ccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccc
Confidence            4556778899999999999753  689999999999999999999999999999888888875333221           


Q ss_pred             ------------------CCC-CCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          150 ------------------IPS-GLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       150 ------------------~~~-~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                                        ++. .++..-.+|+..+|.+||.+|.|+.+.|+      +.||.+
T Consensus       310 ~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~------h~~F~e  366 (419)
T KOG0663|consen  310 AVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK------HEYFRE  366 (419)
T ss_pred             hhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc------cccccc
Confidence                              111 15578889999999999999999999998      888765

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.96  E-value=3.3e-28  Score=238.40  Aligned_cols=178  Identities=21%  Similarity=0.337  Sum_probs=151.3

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.......++..++..++.||+.||+|||++|++|+||||+||+++.++.++|+|||.+.......  
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~--  158 (261)
T cd05148          81 TELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV--  158 (261)
T ss_pred             EeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCcc--
Confidence            789985 99999976556679999999999999999999999999999999999999999999999999987653311  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                       .......++..|+|||.+...   .++.++|+||||+++|+|++ |..||...+..+.+..+.. ....+.+..+++.+
T Consensus       159 -~~~~~~~~~~~~~~PE~~~~~---~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  233 (261)
T cd05148         159 -YLSSDKKIPYKWTAPEAASHG---TFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITA-GYRMPCPAKCPQEI  233 (261)
T ss_pred             -ccccCCCCceEecCHHHHccC---CCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHh-CCcCCCCCCCCHHH
Confidence             111233456789999998743   67889999999999999998 8999988887777776654 34455677899999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHh
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKS  185 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~  185 (503)
                      .++|.+||+.||.+|||+.++++.|+.
T Consensus       234 ~~~i~~~l~~~p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         234 YKIMLECWAAEPEDRPSFKALREELDN  260 (261)
T ss_pred             HHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence            999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.96  E-value=4.6e-28  Score=237.47  Aligned_cols=181  Identities=20%  Similarity=0.327  Sum_probs=149.1

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++..  ...+++..++.++.|++.||+|||+++++|+||||+||+++.++.++|+|||++.........
T Consensus        74 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~  151 (257)
T cd05060          74 MELAPLGPLLKYLKK--RREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY  151 (257)
T ss_pred             EEeCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcc
Confidence            68887 599999974  347999999999999999999999999999999999999999999999999998765432211


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........++..|+|||.+.+.   .++.++|+||||+++|+|++ |..||...+..+....+.. ......+..++..+
T Consensus       152 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l  227 (257)
T cd05060         152 YRATTAGRWPLKWYAPECINYG---KFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLES-GERLPRPEECPQEI  227 (257)
T ss_pred             cccccCccccccccCHHHhcCC---CCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHc-CCcCCCCCCCCHHH
Confidence            1111122335679999998743   57889999999999999998 9999988777666655543 34455677889999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQ  187 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~  187 (503)
                      .++|.+||..+|++||++.++++.|+.+.
T Consensus       228 ~~li~~cl~~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         228 YSIMLSCWKYRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             HHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence            99999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.96  E-value=3.3e-28  Score=238.41  Aligned_cols=176  Identities=19%  Similarity=0.338  Sum_probs=148.3

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.......+++..++.++.|++.||+|||++|++||||||+||+++.++.+||+|||++......   
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~---  155 (256)
T cd05082          79 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---  155 (256)
T ss_pred             EECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceecccc---
Confidence            68998 59999997655556899999999999999999999999999999999999999999999999988754321   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                         ......+..|+|||++...   .++.++|+|||||++|+|++ |..||......+....+.. ...+..+..+++.+
T Consensus       156 ---~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  228 (256)
T cd05082         156 ---QDTGKLPVKWTAPEALREK---KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK-GYKMDAPDGCPPVV  228 (256)
T ss_pred             ---CCCCccceeecCHHHHccC---CCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc-CCCCCCCCCCCHHH
Confidence               1223345689999998743   57889999999999999998 9999988777776665543 33455667889999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhh
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSS  186 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i  186 (503)
                      .+++.+||+.+|++|||+.++++.|+.+
T Consensus       229 ~~li~~~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         229 YDVMKQCWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             HHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence            9999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.96  E-value=3.6e-28  Score=239.58  Aligned_cols=178  Identities=22%  Similarity=0.360  Sum_probs=146.0

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.......+++..+..++.|++.||+|||+++|+|+||||+||+++.++.++|+|||++......   
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~---  164 (272)
T cd06637          88 MEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT---  164 (272)
T ss_pred             EEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceecccc---
Confidence            68998 49999997655567999999999999999999999999999999999999999999999999998764321   


Q ss_pred             CCCCCCccCCCCCCCccccCCCC--CCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA  157 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~--~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~  157 (503)
                      ........|+..|+|||++.+..  ...++.++|+|||||++|+|++|..||.....................+..++..
T Consensus       165 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (272)
T cd06637         165 VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKK  244 (272)
T ss_pred             cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCCCCCCCcCHH
Confidence            12233567889999999986321  2357889999999999999999999998766555544443333333344568899


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          158 VENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +.+||.+||..||.+|||+.++++
T Consensus       245 ~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         245 FQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             HHHHHHHHcCCChhhCCCHHHHhh
Confidence            999999999999999999999988

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.96  E-value=4.1e-28  Score=253.24  Aligned_cols=187  Identities=20%  Similarity=0.264  Sum_probs=151.1

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCC-
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL-   78 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~-   78 (503)
                      ||||+| +|.+++.  ..+.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++..+..... 
T Consensus        80 ~E~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~  157 (382)
T cd05625          80 MDYIPGGDMMSLLI--RMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS  157 (382)
T ss_pred             EeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccc
Confidence            799984 8999886  346789999999999999999999999999999999999999999999999999753210000 


Q ss_pred             -------------------------------------------CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHH
Q 010713           79 -------------------------------------------PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGF  115 (503)
Q Consensus        79 -------------------------------------------~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSL  115 (503)
                                                                 ........+||+.|+|||++.+.   .++.++|||||
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~~~~~DiwSl  234 (382)
T cd05625         158 KYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRT---GYTQLCDWWSV  234 (382)
T ss_pred             cccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCC---CCCCeeeEEec
Confidence                                                       00011234789999999999754   68899999999


Q ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCC--CCCcHHHHHHHHHhhhcCCCCCCC---HHHHHHHHHhhccCc
Q 010713          116 ACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDLRSRPL---MTDILRVFKSSQNSV  190 (503)
Q Consensus       116 GviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~--~~~s~~l~~LI~~cL~~DP~~RPS---~~elL~~L~~i~~~~  190 (503)
                      ||++|||++|+.||...+..+....+.........+  ..+++++.++|.+|+ .+|.+|++   +.++++      |+|
T Consensus       235 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~------hp~  307 (382)
T cd05625         235 GVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKA------HPF  307 (382)
T ss_pred             hHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc------CCC
Confidence            999999999999999888777766665543333333  467999999999986 49999987   888877      999


Q ss_pred             CCCCCCCCC
Q 010713          191 HSDGGWTGH  199 (503)
Q Consensus       191 ~~~~~w~~~  199 (503)
                      +...+|...
T Consensus       308 f~~~~~~~~  316 (382)
T cd05625         308 FKTIDFSSD  316 (382)
T ss_pred             cCCcChHHH
Confidence            998888654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=8.6e-28  Score=246.32  Aligned_cols=192  Identities=21%  Similarity=0.332  Sum_probs=154.3

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.. ....+++.++..++.||+.||+|||+++|+||||||+|||++.++.++|+|||++.......  
T Consensus        80 ~e~~~g~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--  156 (331)
T cd05597          80 MDYYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG--  156 (331)
T ss_pred             EecCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCC--
Confidence            78997 599999864 35679999999999999999999999999999999999999999999999999986653311  


Q ss_pred             CCCCCCccCCCCCCCccccCCCC--CCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCC---CCC
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP---SGL  154 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~--~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~---~~~  154 (503)
                      ........||+.|+|||++....  ...++.++|+|||||++|+|++|+.||.+.+..+.+..+........++   ..+
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  236 (331)
T cd05597         157 TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDV  236 (331)
T ss_pred             CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCC
Confidence            11122346899999999986321  2356789999999999999999999999888877777776543333332   457


Q ss_pred             cHHHHHHHHHhhhcCCCC--CCCHHHHHHHHHhhccCcCCCCCCCCCCC
Q 010713          155 PPAVENVLLGCFEYDLRS--RPLMTDILRVFKSSQNSVHSDGGWTGHGS  201 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~--RPS~~elL~~L~~i~~~~~~~~~w~~~~~  201 (503)
                      +..++++|.+||..++.+  |+++.++++      ++|+...+|.....
T Consensus       237 ~~~~~~li~~ll~~~~~r~~r~~~~~~l~------hp~~~~~~~~~~~~  279 (331)
T cd05597         237 SEEAKDLIRRLICSPETRLGRNGLQDFKD------HPFFEGIDWDNIRN  279 (331)
T ss_pred             CHHHHHHHHHHccCcccccCCCCHHHHhc------CCCCCCCCHHHHhh
Confidence            999999999988654433  789999998      99999988877643

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=5.2e-28  Score=244.76  Aligned_cols=192  Identities=22%  Similarity=0.305  Sum_probs=156.1

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||+.| +|.+++.......+++..+..++.|++.||+|||+.|++|+||||+||+++.++.++|+|||++.........
T Consensus        80 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~  159 (316)
T cd05574          80 MDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPP  159 (316)
T ss_pred             EEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccc
Confidence            688885 9999987655678999999999999999999999999999999999999999999999999988654321100


Q ss_pred             --------------------------CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 010713           80 --------------------------SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS  133 (503)
Q Consensus        80 --------------------------~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~  133 (503)
                                                ........|+..|+|||++.+.   .++.++||||||+++|+|++|..||.+.+
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~---~~~~~~Di~slG~ll~~l~~g~~pf~~~~  236 (316)
T cd05574         160 VSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGD---GHGSAVDWWTLGILLYEMLYGTTPFKGSN  236 (316)
T ss_pred             cccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCC---CCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence                                      0111234678899999999744   57889999999999999999999999888


Q ss_pred             hHHHHHHHHhccCCCCCCCCCcHHHHHHHHHhhhcCCCCCCC----HHHHHHHHHhhccCcCCCCCCCCCCC
Q 010713          134 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL----MTDILRVFKSSQNSVHSDGGWTGHGS  201 (503)
Q Consensus       134 ~~e~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS----~~elL~~L~~i~~~~~~~~~w~~~~~  201 (503)
                      ....+..+.......+....++..+.++|.+||+.||++||+    +.++++      ++|+...+|....-
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~------~~~~~~~~~~~~~~  302 (316)
T cd05574         237 RDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ------HPFFRGVNWALIRH  302 (316)
T ss_pred             hHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc------CchhhcCChhhccc
Confidence            777766665433333333347999999999999999999999    777777      88888888877644

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.96  E-value=8e-28  Score=234.86  Aligned_cols=174  Identities=26%  Similarity=0.520  Sum_probs=147.8

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ ++|.+.+.......+++.++..++.|++.||++||++|++|+||||+||+++.++.++|+|||++......   
T Consensus        79 ~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~---  155 (257)
T cd08223          79 MGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ---  155 (257)
T ss_pred             ecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEeccc---
Confidence            78998 58999997655667999999999999999999999999999999999999999999999999998765331   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........+++.|+|||++.+.   .++.++|+||||+++|+|++|..||...+.......+... ..+..+..+++.+.
T Consensus       156 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  231 (257)
T cd08223         156 CDMASTLIGTPYYMSPELFSNK---PYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEG-KLPPMPKDYSPELG  231 (257)
T ss_pred             CCccccccCCcCccChhHhcCC---CCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc-CCCCCccccCHHHH
Confidence            1223345688999999998743   5788999999999999999999999887766665555443 33455677899999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 010713          160 NVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ++|.+||+.||++||++.++++
T Consensus       232 ~li~~~l~~~p~~Rp~~~~~l~  253 (257)
T cd08223         232 ELIATMLSKRPEKRPSVKSILR  253 (257)
T ss_pred             HHHHHHhccCcccCCCHHHHhc
Confidence            9999999999999999999988

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.96  E-value=5.4e-28  Score=248.93  Aligned_cols=166  Identities=20%  Similarity=0.374  Sum_probs=137.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCCCCCCCccCCCCCCCcccc
Q 010713           19 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQW   98 (503)
Q Consensus        19 ~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l   98 (503)
                      .+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++........ ........++..|+|||++
T Consensus       169 ~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~-~~~~~~~~~~~~y~aPE~~  247 (337)
T cd05054         169 PLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-YVRKGDARLPLKWMAPESI  247 (337)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcc-hhhccCCCCCccccCcHHh
Confidence            689999999999999999999999999999999999999999999999999976533211 1112234556789999998


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHH
Q 010713           99 QPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMT  177 (503)
Q Consensus        99 ~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~  177 (503)
                      .+.   .++.++|||||||++|+|++ |..||.+....+..............+...++++.+++.+||+.+|++||++.
T Consensus       248 ~~~---~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~  324 (337)
T cd05054         248 FDK---VYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFS  324 (337)
T ss_pred             cCC---CCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCHH
Confidence            743   68899999999999999998 99999876555544444444445556677889999999999999999999999


Q ss_pred             HHHHHHHhhcc
Q 010713          178 DILRVFKSSQN  188 (503)
Q Consensus       178 elL~~L~~i~~  188 (503)
                      ++++.|+.+..
T Consensus       325 ell~~l~~~~~  335 (337)
T cd05054         325 ELVEILGDLLQ  335 (337)
T ss_pred             HHHHHHHHHHh
Confidence            99999987653

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.96  E-value=5.6e-28  Score=234.84  Aligned_cols=179  Identities=22%  Similarity=0.401  Sum_probs=151.9

Q ss_pred             CcCCC-CCHHHHHHhhc-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCccc
Q 010713            1 MKFYE-GSVGDRMAQLK-------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL   72 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~-------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~   72 (503)
                      |||++ |+|.+++....       ...+++.++..++.|++.||+|||+++++|+||||+||+++.++.++|+|||.+..
T Consensus        75 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~  154 (262)
T cd00192          75 LEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRD  154 (262)
T ss_pred             EEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccc
Confidence            68995 69999997531       37799999999999999999999999999999999999999999999999999977


Q ss_pred             ccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCC
Q 010713           73 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP  151 (503)
Q Consensus        73 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~  151 (503)
                      ...... ........++..|+|||.+...   .++.++|+||||+++|+|++ |..||......+....+.. ......+
T Consensus       155 ~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~  229 (262)
T cd00192         155 VYDDDY-YRKKTGGKLPIRWMAPESLKDG---IFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK-GYRLPKP  229 (262)
T ss_pred             cccccc-cccccCCCcCccccCHHHhccC---CcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-CCCCCCC
Confidence            643221 1223345678899999998753   67889999999999999999 6999999888777777665 3455667


Q ss_pred             CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 010713          152 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  184 (503)
Q Consensus       152 ~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~  184 (503)
                      ..++.++.+++.+||..+|++|||+.++++.|+
T Consensus       230 ~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         230 EYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             ccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            788999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.96  E-value=5.2e-28  Score=237.36  Aligned_cols=179  Identities=20%  Similarity=0.359  Sum_probs=149.6

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.......++..+++.++.|++.||+|||+++++|+||||+||+++.++.++|+|||++........ 
T Consensus        80 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~-  158 (261)
T cd05072          80 TEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY-  158 (261)
T ss_pred             EecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCce-
Confidence            68887 5999999765567899999999999999999999999999999999999999999999999999976543211 


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                       .......++..|+|||++.+.   .++.++|+|||||++|+|++ |..||......+....+... ...+....++.++
T Consensus       159 -~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  233 (261)
T cd05072         159 -TAREGAKFPIKWTAPEAINFG---SFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRG-YRMPRMENCPDEL  233 (261)
T ss_pred             -eccCCCccceecCCHHHhccC---CCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCCHHH
Confidence             111233456789999998743   57889999999999999998 99999887777766665543 3334456789999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHh
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKS  185 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~  185 (503)
                      .+++.+||..+|++||+++++.+.|+.
T Consensus       234 ~~li~~~l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         234 YDIMKTCWKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             HHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.96  E-value=6.7e-28  Score=241.42  Aligned_cols=184  Identities=20%  Similarity=0.372  Sum_probs=151.4

Q ss_pred             CcCCC-CCHHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEE
Q 010713            1 MKFYE-GSVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG   65 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~--------------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~   65 (503)
                      |||++ |+|.+++....              .+.+++.+++.++.||+.||+|||++||+||||||+||+++.++.++|+
T Consensus        86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~  165 (291)
T cd05094          86 FEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIG  165 (291)
T ss_pred             EecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEEC
Confidence            78997 59999996432              2458999999999999999999999999999999999999999999999


Q ss_pred             ecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc
Q 010713           66 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR  144 (503)
Q Consensus        66 DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~  144 (503)
                      |||++........ ........++..|+|||.+.+.   .++.++|+||||+++|+|++ |..||......+....+.. 
T Consensus       166 dfg~a~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-  240 (291)
T cd05094         166 DFGMSRDVYSTDY-YRVGGHTMLPIRWMPPESIMYR---KFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQ-  240 (291)
T ss_pred             CCCcccccCCCce-eecCCCCCcceeecChHHhccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhC-
Confidence            9999875433211 1112234567889999998754   57889999999999999999 9999988877776665543 


Q ss_pred             cCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       145 ~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      ...+..+..++..+.+++.+||+.||.+||++.++++.|+++..+
T Consensus       241 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~  285 (291)
T cd05094         241 GRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA  285 (291)
T ss_pred             CCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence            333445567889999999999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.96  E-value=5.2e-28  Score=240.72  Aligned_cols=181  Identities=20%  Similarity=0.329  Sum_probs=142.5

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||+++ +|.+++..   ..+++.+++.++.|++.||+|||+++|+|+||||+||+++.++.++|+|||++.........
T Consensus        87 ~e~~~~~~l~~~~~~---~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~  163 (283)
T cd05080          87 MEYVPLGSLRDYLPK---HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY  163 (283)
T ss_pred             ecCCCCCCHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcchh
Confidence            789985 89988853   46999999999999999999999999999999999999999999999999998765432211


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChH--------------HHHHHHHhcc
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD--------------EIYDAVVRRQ  145 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~--------------e~~~~i~~~~  145 (503)
                      ........++..|+|||.+.+.   .++.++|+||||+++|+|++|..||......              ..........
T Consensus       164 ~~~~~~~~~~~~~~~PE~~~~~---~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (283)
T cd05080         164 YRVREDGDSPVFWYAVECLKEN---KFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERG  240 (283)
T ss_pred             hccCCCCCCCceeeCHhHhccc---CCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcC
Confidence            1111223456679999998743   5788999999999999999999998643211              0111111222


Q ss_pred             CCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhc
Q 010713          146 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQ  187 (503)
Q Consensus       146 ~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~  187 (503)
                      ...+.+..++..+.+++.+||+.+|++|||+.++++.|+.+.
T Consensus       241 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         241 MRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             CCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence            334456778899999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.96  E-value=3.8e-28  Score=263.27  Aligned_cols=176  Identities=20%  Similarity=0.395  Sum_probs=150.6

Q ss_pred             CcCCC-CCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCC
Q 010713            1 MKFYE-GSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~--~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~   77 (503)
                      |||++ |+|.+++...  ....+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++......
T Consensus       118 ~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~  197 (496)
T PTZ00283        118 LDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATV  197 (496)
T ss_pred             EeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccCeeccccc
Confidence            68998 5999998653  24579999999999999999999999999999999999999999999999999987654321


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHH
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA  157 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~  157 (503)
                       .........||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.+..+.+..+.... ..+++..++++
T Consensus       198 -~~~~~~~~~Gt~~Y~aPE~~~~~---~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~  272 (496)
T PTZ00283        198 -SDDVGRTFCGTPYYVAPEIWRRK---PYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGR-YDPLPPSISPE  272 (496)
T ss_pred             -cccccccccCCcceeCHHHhCCC---CCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCC-CCCCCCCCCHH
Confidence             11223456799999999999754   68899999999999999999999999888877777665533 34567889999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          158 VENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +.+++.+||+.||.+||++.++++
T Consensus       273 l~~li~~~L~~dP~~RPs~~ell~  296 (496)
T PTZ00283        273 MQEIVTALLSSDPKRRPSSSKLLN  296 (496)
T ss_pred             HHHHHHHHcccChhhCcCHHHHHh
Confidence            999999999999999999999987

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.95  E-value=4.1e-28  Score=250.43  Aligned_cols=175  Identities=19%  Similarity=0.211  Sum_probs=141.6

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++++|.+.+.    ..++...+..++.|++.||+|||++||+||||||+||+++.++.+||+|||++.....    .
T Consensus       101 ~e~~~~~l~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~----~  172 (355)
T cd07874         101 MELMDANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----S  172 (355)
T ss_pred             hhhhcccHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCC----c
Confidence            7899999888774    2489999999999999999999999999999999999999999999999999876432    2


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC-------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-------------  147 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~-------------  147 (503)
                      .......+|+.|+|||++.+.   .++.++|+|||||++|+|++|+.||.+.+..+.+..+......             
T Consensus       173 ~~~~~~~~t~~y~aPE~~~~~---~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (355)
T cd07874         173 FMMTPYVVTRYYRAPEVILGM---GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV  249 (355)
T ss_pred             cccCCccccCCccCHHHHcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHH
Confidence            223456789999999999754   5788999999999999999999999887655444333221100             


Q ss_pred             ---------------------------CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          148 ---------------------------PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       148 ---------------------------~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                                                 ...+...+..+++||.+||+.||++|||+.|+++      ++|+.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~------hp~~~  315 (355)
T cd07874         250 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQ------HPYIN  315 (355)
T ss_pred             HHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhc------Ccchh
Confidence                                       0011224567899999999999999999999998      77765

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=2.3e-29  Score=257.86  Aligned_cols=172  Identities=22%  Similarity=0.376  Sum_probs=148.8

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+| ++.++++  .+..+.+.++.-++++++.||.|||.++.+|||||+.|||+..+|.+||+|||.+......   
T Consensus        90 Mey~~gGsv~~lL~--~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~---  164 (467)
T KOG0201|consen   90 MEYCGGGSVLDLLK--SGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNT---  164 (467)
T ss_pred             HHHhcCcchhhhhc--cCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeech---
Confidence            899995 9999996  4555599999999999999999999999999999999999999999999999999776542   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      .....+++||+.|||||++.+.   .|+.++||||||++.+||++|.+|+....+......| -+..+|.....+++.++
T Consensus       165 ~~rr~tfvGTPfwMAPEVI~~~---~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflI-pk~~PP~L~~~~S~~~k  240 (467)
T KOG0201|consen  165 VKRRKTFVGTPFWMAPEVIKQS---GYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLI-PKSAPPRLDGDFSPPFK  240 (467)
T ss_pred             hhccccccccccccchhhhccc---cccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEec-cCCCCCccccccCHHHH
Confidence            2233688999999999999854   6999999999999999999999999988775443333 23445556678999999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 010713          160 NVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +||..||++||+.||++.++++
T Consensus       241 EFV~~CL~k~P~~RpsA~~LLK  262 (467)
T KOG0201|consen  241 EFVEACLDKNPEFRPSAKELLK  262 (467)
T ss_pred             HHHHHHhhcCcccCcCHHHHhh
Confidence            9999999999999999999998

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.95  E-value=7.8e-28  Score=238.98  Aligned_cols=182  Identities=18%  Similarity=0.335  Sum_probs=148.7

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.. ....+++.+++.++.|++.||+|||+++|+||||||+||+++.++.+||+|||+++....... 
T Consensus        87 ~~~~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~-  164 (279)
T cd05109          87 TQLMPYGCLLDYVRE-NKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDET-  164 (279)
T ss_pred             EEcCCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecccccc-
Confidence            57787 699999864 345799999999999999999999999999999999999999999999999999876543111 


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........+++.|+|||.+.+.   .++.++|||||||++|||++ |..||...........+ .....++.+..++..+
T Consensus       165 ~~~~~~~~~~~~y~~PE~~~~~---~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  240 (279)
T cd05109         165 EYHADGGKVPIKWMALESILHR---RFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLL-EKGERLPQPPICTIDV  240 (279)
T ss_pred             eeecCCCccchhhCCHHHhccC---CCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-HCCCcCCCCccCCHHH
Confidence            1111223346789999998743   58889999999999999998 99999877766655544 3344455567789999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      .+++.+||+.||++||++.++++.|+.+..
T Consensus       241 ~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05109         241 YMIMVKCWMIDSECRPRFRELVDEFSRMAR  270 (279)
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            999999999999999999999998887643

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.95  E-value=6.7e-28  Score=244.05  Aligned_cols=179  Identities=21%  Similarity=0.229  Sum_probs=135.7

Q ss_pred             CcCCCCCHHHHHHhhc-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEE----ccCCcEEEEecCC
Q 010713            1 MKFYEGSVGDRMAQLK-------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL----NEADRAVLGDVGI   69 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~-------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILl----d~~~~vKL~DFGl   69 (503)
                      |||++++|.+++....       ...+++..+..++.||+.||+|||++||+||||||+|||+    +.++.+||+|||+
T Consensus        79 ~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~  158 (317)
T cd07868          79 FDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF  158 (317)
T ss_pred             EeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence            6899999999886421       2358999999999999999999999999999999999999    4557899999999


Q ss_pred             cccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCh---------HHHHHH
Q 010713           70 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV---------DEIYDA  140 (503)
Q Consensus        70 a~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~---------~e~~~~  140 (503)
                      +.................+|+.|+|||++.+.  ..++.++|+|||||++|+|++|++||.....         ......
T Consensus       159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~  236 (317)
T cd07868         159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGA--RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR  236 (317)
T ss_pred             eeccCCCCccccccCCccccccccCCHHHcCC--CCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHH
Confidence            97664322222233456789999999998753  2578899999999999999999999965332         111111


Q ss_pred             HHhccCCC------------------------------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          141 VVRRQEIP------------------------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       141 i~~~~~~~------------------------------------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +......+                                    ......+..+.+||.+||+.||.+|||+.|+++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~  313 (317)
T cd07868         237 IFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ  313 (317)
T ss_pred             HHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhc
Confidence            11100000                                    000123567889999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.95  E-value=9.3e-29  Score=255.07  Aligned_cols=184  Identities=21%  Similarity=0.312  Sum_probs=150.8

Q ss_pred             CcCCCCCHHHHHHhhcCCC-CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGK-LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~-Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      +|||..  ..+........ |++.++++|+.+++.||+|||.+|||||||||+|+|++.+|++||+|||.+..+......
T Consensus       189 ley~s~--G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~  266 (576)
T KOG0585|consen  189 LEYCSK--GEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDE  266 (576)
T ss_pred             EEeccC--CccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeeccceeeecccCCcc
Confidence            467772  22332224455 999999999999999999999999999999999999999999999999998776432111


Q ss_pred             --CCCCCCccCCCCCCCccccCCCC-CCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcH
Q 010713           80 --SSDLPRRLGTPNYMAPEQWQPEV-RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP  156 (503)
Q Consensus        80 --~~~~~~~~Gt~~Y~APE~l~~~~-~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~  156 (503)
                        ........|||.|+|||.+.+.. ....+++.||||+|++||.|+.|+.||.+....+++.+|+......+....+.+
T Consensus       267 ~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e  346 (576)
T KOG0585|consen  267 GSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPENPEINE  346 (576)
T ss_pred             ccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCcccccH
Confidence              12234578999999999998642 223468899999999999999999999999999999999986655555566899


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          157 AVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      .+++||.+||++||++|.++.+|..      |+|-.
T Consensus       347 ~~kDli~~lL~KdP~~Ri~l~~ik~------Hpwvt  376 (576)
T KOG0585|consen  347 DLKDLIKRLLEKDPEQRITLPDIKL------HPWVT  376 (576)
T ss_pred             HHHHHHHHHhhcChhheeehhhhee------cceec
Confidence            9999999999999999999999987      66643

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.95  E-value=5.8e-28  Score=260.48  Aligned_cols=176  Identities=23%  Similarity=0.334  Sum_probs=149.8

Q ss_pred             CcCCC-CCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCC
Q 010713            1 MKFYE-GSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~--~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~   77 (503)
                      |||++ |+|.+++...  ....+++.++..++.||+.||+|||+++|+||||||+|||++.++.+||+|||++.......
T Consensus       144 ~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~  223 (478)
T PTZ00267        144 MEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV  223 (478)
T ss_pred             EECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence            79998 5999988643  34578999999999999999999999999999999999999999999999999998754321


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHH
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA  157 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~  157 (503)
                       ........+||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.+..++...+.... ..+.+..++..
T Consensus       224 -~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~s~~  298 (478)
T PTZ00267        224 -SLDVASSFCGTPYYLAPELWERK---RYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGK-YDPFPCPVSSG  298 (478)
T ss_pred             -ccccccccCCCccccCHhHhCCC---CCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-CCCCCccCCHH
Confidence             11123456799999999999743   68899999999999999999999999888877777766543 34566788999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          158 VENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +.++|.+||..||++||++.+++.
T Consensus       299 ~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        299 MKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             HHHHHHHHhccChhhCcCHHHHHh
Confidence            999999999999999999999986

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.95  E-value=1.4e-27  Score=234.69  Aligned_cols=179  Identities=21%  Similarity=0.347  Sum_probs=148.4

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ ++|.+++.......+++.++..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++........ 
T Consensus        80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~-  158 (261)
T cd05068          80 TELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY-  158 (261)
T ss_pred             eecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc-
Confidence            78995 6999999754445799999999999999999999999999999999999999999999999999877642111 


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                       ........+..|+|||.+.+.   .++.++|+||||+++|+|++ |+.||.+.........+... ...+.+..++..+
T Consensus       159 -~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  233 (261)
T cd05068         159 -EAREGAKFPIKWTAPEAALYN---RFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQG-YRMPCPPGCPKEL  233 (261)
T ss_pred             -cccCCCcCceeccCccccccC---CCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-CCCCCCCcCCHHH
Confidence             111112234579999998743   67889999999999999999 99999988777766665433 3345567789999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHh
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKS  185 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~  185 (503)
                      .+++.+||+.+|++||++.++++.|+.
T Consensus       234 ~~li~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         234 YDIMLDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             HHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence            999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.95  E-value=1.2e-27  Score=238.41  Aligned_cols=182  Identities=21%  Similarity=0.350  Sum_probs=150.2

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||+. |+|.+++.. ....+++..+..++.||+.||+|||+++++|+||||+||+++.++.+||+|||+++....... 
T Consensus        87 ~e~~~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~-  164 (279)
T cd05111          87 TQLSPLGSLLDHVRQ-HRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDK-  164 (279)
T ss_pred             EEeCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCc-
Confidence            57777 699999974 456799999999999999999999999999999999999999999999999999876533211 


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........++..|+|||.+.+   +.++.++|+||||+++|||++ |..||.+.........+ .....+..+..++..+
T Consensus       165 ~~~~~~~~~~~~y~~pE~~~~---~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  240 (279)
T cd05111         165 KYFYSEHKTPIKWMALESILF---GRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLL-EKGERLAQPQICTIDV  240 (279)
T ss_pred             ccccCCCCCcccccCHHHhcc---CCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-HCCCcCCCCCCCCHHH
Confidence            111223456778999999874   368899999999999999998 99999887766554444 4444555566788999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      .+++.+|+..||++|||+.|+++.|..+..
T Consensus       241 ~~li~~c~~~~p~~Rps~~el~~~l~~~~~  270 (279)
T cd05111         241 YMVMVKCWMIDENVRPTFKELANEFTRMAR  270 (279)
T ss_pred             HHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence            999999999999999999999999988653

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.95  E-value=6.3e-28  Score=240.89  Aligned_cols=191  Identities=19%  Similarity=0.344  Sum_probs=151.6

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.  ..+.+++.++..++.|++.||+|||+++|+|+||||+||+++.++.++|+|||++......   
T Consensus        76 ~e~~~~~~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~---  150 (279)
T cd05633          76 LDLMNGGDLHYHLS--QHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---  150 (279)
T ss_pred             EecCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceecccc---
Confidence            789985 8988886  4567999999999999999999999999999999999999999999999999998654321   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHhccCCCCCCCCCcHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD--EIYDAVVRRQEIPPIPSGLPPA  157 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~--e~~~~i~~~~~~~~~~~~~s~~  157 (503)
                        ......|+..|+|||.+...  ..++.++|+|||||++|+|++|..||......  ...... .......++..++.+
T Consensus       151 --~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  225 (279)
T cd05633         151 --KPHASVGTHGYMAPEVLQKG--TAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM-TLTVNVELPDSFSPE  225 (279)
T ss_pred             --CccCcCCCcCccCHHHhcCC--CCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHH-hhcCCcCCccccCHH
Confidence              12234689999999998632  24788999999999999999999999754321  112111 112334566778999


Q ss_pred             HHHHHHHhhhcCCCCCC-----CHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCC
Q 010713          158 VENVLLGCFEYDLRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDK  207 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RP-----S~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p  207 (503)
                      +.++|.+||..||.+||     ++.++++      ++|+.+.+|........++|
T Consensus       226 ~~~li~~~l~~~p~~R~~~~~~~~~~~~~------h~~~~~~~~~~~~~~~~~~~  274 (279)
T cd05633         226 LKSLLEGLLQRDVSKRLGCLGRGAQEVKE------HVFFKGIDWQQVYLQKYPPP  274 (279)
T ss_pred             HHHHHHHHhcCCHHHhcCCCCCCHHHHHh------CccccCCCHhHHhcCCCCCC
Confidence            99999999999999999     5999988      99999888766543333333

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.95  E-value=9.3e-28  Score=235.70  Aligned_cols=179  Identities=21%  Similarity=0.354  Sum_probs=149.1

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.......+++.+++.++.|++.||+|||+++++|+||||+||++++++.++|+|||++.......  
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~--  156 (260)
T cd05070          79 TEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNE--  156 (260)
T ss_pred             EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcc--
Confidence            68887 499999975445679999999999999999999999999999999999999999999999999987653321  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........++..|+|||.+.+.   .++.++|+||||+++|+|++ |..||.+.+..+....+.. ....+.+...+..+
T Consensus       157 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  232 (260)
T cd05070         157 YTARQGAKFPIKWTAPEAALYG---RFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVER-GYRMPCPQDCPISL  232 (260)
T ss_pred             cccccCCCCCccccChHHHhcC---CCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-CCCCCCCCcCCHHH
Confidence            1111223355689999998643   67889999999999999999 8999988877776666543 34455677889999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHh
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKS  185 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~  185 (503)
                      .+|+.+||..+|++|||+.++.+.|+.
T Consensus       233 ~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         233 HELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             HHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.95  E-value=7.3e-28  Score=238.09  Aligned_cols=179  Identities=17%  Similarity=0.262  Sum_probs=147.7

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.. ....+++.+++.++.||+.||+|||++|++||||||+||+++.++.++++|||.+.......  
T Consensus        85 ~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~--  161 (266)
T cd05064          85 TEYMSNGALDSFLRK-HEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA--  161 (266)
T ss_pred             EEeCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccc--
Confidence            799985 88888864 34679999999999999999999999999999999999999999999999999765432211  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........++..|+|||.+.+.   .++.++|||||||++|++++ |..||.+.+..+....+... ...+.+..++..+
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  237 (266)
T cd05064         162 IYTTMSGKSPVLWAAPEAIQYH---HFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDG-FRLPAPRNCPNLL  237 (266)
T ss_pred             hhcccCCCCceeecCHHHHhhC---CccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC-CCCCCCCCCCHHH
Confidence            1111123456789999998743   68899999999999999775 99999988877776666443 3445678899999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhh
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSS  186 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i  186 (503)
                      .+++.+||+.+|.+||++.+|++.|+.+
T Consensus       238 ~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         238 HQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             HHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence            9999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.95  E-value=1.2e-27  Score=241.54  Aligned_cols=207  Identities=20%  Similarity=0.324  Sum_probs=164.2

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.. ....+++..+..++.|++.||+|||+++|+|+||||+||+++.++.+||+|||++........ 
T Consensus        87 ~e~~~~g~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~-  164 (303)
T cd05110          87 TQLMPHGCLLDYVHE-HKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK-  164 (303)
T ss_pred             ehhcCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCccc-
Confidence            57887 699999864 345689999999999999999999999999999999999999999999999999976543211 


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........++..|+|||++.+.   .++.++||||||+++|+|++ |..||.+....+....+ ......+.+..++..+
T Consensus       165 ~~~~~~~~~~~~y~~PE~~~~~---~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  240 (303)
T cd05110         165 EYNADGGKMPIKWMALECIHYR---KFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLL-EKGERLPQPPICTIDV  240 (303)
T ss_pred             ccccCCCccccccCCHHHhccC---CCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HCCCCCCCCCCCCHHH
Confidence            1112233456789999998743   67889999999999999997 99999877665554443 3444455567788999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCCc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGYT  213 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~~  213 (503)
                      .+++.+||..+|++||++.++++.|+.+.+.......+.+..+...+.|....|.
T Consensus       241 ~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (303)
T cd05110         241 YMVMVKCWMIDADSRPKFKELAAEFSRMARDPQRYLVIQGDDRMKLPSPNDSKFF  295 (303)
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHHHHHHHhchhhheeeccCCcCCCCCCchhhHH
Confidence            9999999999999999999999999998777666666666555556665555544

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.95  E-value=9.7e-28  Score=239.90  Aligned_cols=184  Identities=19%  Similarity=0.345  Sum_probs=151.1

Q ss_pred             CcCCC-CCHHHHHHhhc-----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecC
Q 010713            1 MKFYE-GSVGDRMAQLK-----------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG   68 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~-----------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFG   68 (503)
                      |||++ |+|.+++....           ...+++.+++.++.|++.||+|||++|++||||||+||+++.++.++|+|||
T Consensus        86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg  165 (288)
T cd05093          86 FEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFG  165 (288)
T ss_pred             EEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccCC
Confidence            68988 59999986432           1358999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCC
Q 010713           69 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEI  147 (503)
Q Consensus        69 la~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~  147 (503)
                      ++........ ........++..|+|||++.+.   .++.++|+|||||++|+|++ |..||......+....+.... .
T Consensus       166 ~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~-~  240 (288)
T cd05093         166 MSRDVYSTDY-YRVGGHTMLPIRWMPPESIMYR---KFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGR-V  240 (288)
T ss_pred             ccccccCCce-eecCCCCCccccccCHHHhccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-c
Confidence            9875432111 1112233457789999998743   57889999999999999998 999998888777776665433 3


Q ss_pred             CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          148 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       148 ~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      ...+..++.++.+|+.+||+.||.+|||+.++++.|+.+...
T Consensus       241 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~  282 (288)
T cd05093         241 LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA  282 (288)
T ss_pred             CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence            445667899999999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.95  E-value=1.1e-28  Score=270.81  Aligned_cols=186  Identities=19%  Similarity=0.249  Sum_probs=153.4

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecccCCCcEEEccCCcEEEEecCCcccccCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG--ILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~g--IvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~   77 (503)
                      ||||. |+|.|+|..+....|++.++++|++|+++|+++||...  |||||||-|||||+.+++.||||||.+.......
T Consensus       121 mEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~  200 (738)
T KOG1989|consen  121 MEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSP  200 (738)
T ss_pred             hhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCC
Confidence            89999 69999999877777999999999999999999999998  9999999999999999999999999886432211


Q ss_pred             CCCCC------CCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCC
Q 010713           78 LPSSD------LPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP  151 (503)
Q Consensus        78 ~~~~~------~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~  151 (503)
                      .....      .-...-|+.|.|||++.-....+++.|+|||+|||+||.|+....||.+....    .|+......+-.
T Consensus       201 ~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l----aIlng~Y~~P~~  276 (738)
T KOG1989|consen  201 TSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL----AILNGNYSFPPF  276 (738)
T ss_pred             ccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce----eEEeccccCCCC
Confidence            00000      01234689999999987444557899999999999999999999999876443    344444444444


Q ss_pred             CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCc
Q 010713          152 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSV  190 (503)
Q Consensus       152 ~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~  190 (503)
                      +.++..+.+||+.||+.||++||++.+++..+..+.+.-
T Consensus       277 p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~  315 (738)
T KOG1989|consen  277 PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP  315 (738)
T ss_pred             ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence            689999999999999999999999999999888887643

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.95  E-value=1.5e-28  Score=247.57  Aligned_cols=181  Identities=19%  Similarity=0.318  Sum_probs=154.6

Q ss_pred             CcCCCCCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC-CcEEEEecCCcccccCCC
Q 010713            1 MKFYEGSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA-DRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~GSL~d~L~~~--~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~-~~vKL~DFGla~~~~~~~   77 (503)
                      |||++-+|.+.+.+.  .+..++.-.+.-|.+||++||+|||+.||+||||||.|+|+|.+ |.+||||||.|+....  
T Consensus       101 leymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~--  178 (364)
T KOG0658|consen  101 LEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVK--  178 (364)
T ss_pred             HHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeecc--
Confidence            799999999999753  36789999999999999999999999999999999999999987 8999999999998754  


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC--------
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--------  149 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~--------  149 (503)
                        .....+...|..|.|||.+.+..  .|+.+.||||.||++.||+.|++.|.+.+..++...+......|.        
T Consensus       179 --~epniSYicSRyYRaPELifga~--~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn  254 (364)
T KOG0658|consen  179 --GEPNISYICSRYYRAPELIFGAT--EYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMN  254 (364)
T ss_pred             --CCCceeEEEeccccCHHHHcCcc--ccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcC
Confidence              33335678899999999999763  799999999999999999999999999888777666654222211        


Q ss_pred             -------------------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          150 -------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       150 -------------------~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                                         +....++++.+|+.++|.++|.+|.++.|++.      +++|+.
T Consensus       255 ~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~------h~fFde  311 (364)
T KOG0658|consen  255 PNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA------HPFFDE  311 (364)
T ss_pred             cccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc------chhhHH
Confidence                               23567899999999999999999999999998      666553

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.95  E-value=9.6e-28  Score=250.71  Aligned_cols=164  Identities=20%  Similarity=0.338  Sum_probs=133.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCCCCCCCccCCCCCCCcccc
Q 010713           19 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQW   98 (503)
Q Consensus        19 ~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l   98 (503)
                      .+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++........ ........++..|+|||++
T Consensus       210 ~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~~~~~~y~aPE~~  288 (375)
T cd05104         210 ALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN-YVVKGNARLPVKWMAPESI  288 (375)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCccc-ccccCCCCCCcceeChhHh
Confidence            578899999999999999999999999999999999999999999999999876533211 1111223345679999999


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHH
Q 010713           99 QPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMT  177 (503)
Q Consensus        99 ~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~  177 (503)
                      .+.   .++.++|+|||||++|+|++ |..||.....................+...+.++.+||.+||+.||++||++.
T Consensus       289 ~~~---~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~  365 (375)
T cd05104         289 FNC---VYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFK  365 (375)
T ss_pred             cCC---CCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCHH
Confidence            743   68899999999999999998 89999876655444444444444455667789999999999999999999999


Q ss_pred             HHHHHHHhh
Q 010713          178 DILRVFKSS  186 (503)
Q Consensus       178 elL~~L~~i  186 (503)
                      ++++.|++.
T Consensus       366 eil~~l~~~  374 (375)
T cd05104         366 QIVQLIEQQ  374 (375)
T ss_pred             HHHHHHHhh
Confidence            999999863

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.95  E-value=9.6e-28  Score=239.24  Aligned_cols=191  Identities=20%  Similarity=0.339  Sum_probs=155.4

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||+.| +|.+++.  ..+.+++.++..++.|++.||+|||+++++|+||||+||+++.++.++|+|||++.....    
T Consensus        76 ~e~~~g~~L~~~l~--~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~----  149 (278)
T cd05606          76 LDLMNGGDLHYHLS--QHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK----  149 (278)
T ss_pred             EecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCc----
Confidence            789985 8888886  456799999999999999999999999999999999999999999999999999865432    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHhccCCCCCCCCCcH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS---VDEIYDAVVRRQEIPPIPSGLPP  156 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~---~~e~~~~i~~~~~~~~~~~~~s~  156 (503)
                       .......|+..|+|||.+.+.  ..++.++|+||+|+++|+|++|..||....   ........  ....+..+..++.
T Consensus       150 -~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~s~  224 (278)
T cd05606         150 -KKPHASVGTHGYMAPEVLQKG--VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT--LTMAVELPDSFSP  224 (278)
T ss_pred             -cCCcCcCCCcCCcCcHHhcCC--CCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHh--hccCCCCCCcCCH
Confidence             122345789999999998642  147889999999999999999999998652   22222222  2234556677899


Q ss_pred             HHHHHHHHhhhcCCCCCC-----CHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCC
Q 010713          157 AVENVLLGCFEYDLRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKS  208 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~RP-----S~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~  208 (503)
                      .+.+++.+||..+|.+||     ++.++++      ++|+...+|........+++.
T Consensus       225 ~~~~li~~~l~~~p~~R~~~~~~~~~~ll~------~~~~~~~~~~~~~~~~~~~~~  275 (278)
T cd05606         225 ELRSLLEGLLQRDVNRRLGCLGRGAQEVKE------HPFFRSLDWQMVFLQKYPPPL  275 (278)
T ss_pred             HHHHHHHHHhhcCHHhccCCCCCCHHHHHh------CccccCCCchHhhhcccCCCC
Confidence            999999999999999999     9999987      999999888877655555443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.95  E-value=6.9e-28  Score=250.69  Aligned_cols=182  Identities=20%  Similarity=0.257  Sum_probs=147.3

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++++|.+.+.  ....+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......  .
T Consensus        83 ~e~~~~~l~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~--~  158 (372)
T cd07853          83 TELMQSDLHKIIV--SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDE--S  158 (372)
T ss_pred             eeccccCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCc--c
Confidence            6899999998885  45679999999999999999999999999999999999999999999999999987643211  1


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccC--------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE--------------  146 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~--------------  146 (503)
                      .......+++.|+|||.+.+.  ..++.++|||||||++|+|++|+.||.+.+..+....+.....              
T Consensus       159 ~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~  236 (372)
T cd07853         159 KHMTQEVVTQYYRAPEILMGS--RHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGA  236 (372)
T ss_pred             ccCCCCCcCCCcCCHHHHcCC--CCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHH
Confidence            222345678999999998753  2478899999999999999999999988776655544432111              


Q ss_pred             ---------CC-------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCC
Q 010713          147 ---------IP-------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDG  194 (503)
Q Consensus       147 ---------~~-------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~  194 (503)
                               .+       ......++++.+||.+||+.||++|||+.++++      ++|+...
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~------hp~~~~~  294 (372)
T cd07853         237 RAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA------HPYLDEG  294 (372)
T ss_pred             HHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc------CHhhCCC
Confidence                     11       123456889999999999999999999999988      7776553

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.95  E-value=1.1e-27  Score=235.55  Aligned_cols=179  Identities=21%  Similarity=0.334  Sum_probs=149.3

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||+.+ +|.+++.......+++..+..++.|++.||+|||+.|++|+||||+||++++++.++|+|||++........ 
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~-  157 (260)
T cd05069          79 TEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY-  157 (260)
T ss_pred             EEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcc-
Confidence            789985 999999764555689999999999999999999999999999999999999999999999999876533211 


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                       .......++..|+|||...+.   .++.++|+||||+++|+|++ |..||.+....+....+.. ...++.+..++..+
T Consensus       158 -~~~~~~~~~~~y~~Pe~~~~~---~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  232 (260)
T cd05069         158 -TARQGAKFPIKWTAPEAALYG---RFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVER-GYRMPCPQGCPESL  232 (260)
T ss_pred             -cccCCCccchhhCCHHHhccC---CcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCCCCCCcccCHHH
Confidence             111223456789999988743   57889999999999999999 9999998877776665543 33445667789999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHh
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKS  185 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~  185 (503)
                      .+++.+||..||++||++.++++.|+.
T Consensus       233 ~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         233 HELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             HHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.95  E-value=3.2e-29  Score=281.76  Aligned_cols=179  Identities=26%  Similarity=0.378  Sum_probs=155.9

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCC-C
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP-L   78 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~-~   78 (503)
                      ||||+ |+|.+++.  .++..++.....|..|++.|++|||++|||||||||+||+++.+|.+|++|||.|....... .
T Consensus      1313 MEyC~~GsLa~ll~--~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~ 1390 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLE--HGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQT 1390 (1509)
T ss_pred             HHHhccCcHHHHHH--hcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhc
Confidence            89999 59999997  45667888888999999999999999999999999999999999999999999998775532 1


Q ss_pred             CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           79 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        79 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      -........||+.|||||++.+........++|||||||++.||+||+.||...+.+-.+...+..+..|++|..++++-
T Consensus      1391 ~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls~~g 1470 (1509)
T KOG4645|consen 1391 MPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERLSSEG 1470 (1509)
T ss_pred             CCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchhhhHhH
Confidence            12234467899999999999976544566789999999999999999999998777666666666778899999999999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHH
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ++||.+||+.||.+|.++.|+++
T Consensus      1471 ~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1471 RDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred             HHHHHHHHhcCchhhhHHHHHHH
Confidence            99999999999999999999888

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.95  E-value=1.1e-27  Score=236.05  Aligned_cols=181  Identities=19%  Similarity=0.284  Sum_probs=148.1

Q ss_pred             CcCCC-CCHHHHHHhh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccC
Q 010713            1 MKFYE-GSVGDRMAQL----KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG   75 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~----~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~   75 (503)
                      |||+. |+|.+++...    ....+++..+..++.||+.||+|||+++|+||||||+||+++.++.++|+|||++.....
T Consensus        85 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  164 (272)
T cd05075          85 LPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYN  164 (272)
T ss_pred             EEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcccccCc
Confidence            67887 5998887532    234589999999999999999999999999999999999999999999999999876543


Q ss_pred             CCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCC
Q 010713           76 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGL  154 (503)
Q Consensus        76 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~  154 (503)
                      .... .......+++.|+|||.+.+.   .++.++|+||||+++|+|++ |..||.+....+....+... .....+..+
T Consensus       165 ~~~~-~~~~~~~~~~~~~~pe~~~~~---~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~  239 (272)
T cd05075         165 GDYY-RQGRIAKMPVKWIAIESLADR---VYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQG-NRLKQPPDC  239 (272)
T ss_pred             ccce-ecCCcccCCcccCCHHHccCC---CcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-CCCCCCCCC
Confidence            2111 111233456789999998743   57889999999999999999 89999887777776665543 334456778


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhh
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILRVFKSS  186 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i  186 (503)
                      +..+.++|.+||+.||++|||+.++++.|+.+
T Consensus       240 ~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         240 LDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             CHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            99999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.95  E-value=1.1e-27  Score=237.04  Aligned_cols=179  Identities=23%  Similarity=0.406  Sum_probs=147.5

Q ss_pred             CcCCC-CCHHHHHHhhc------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEec
Q 010713            1 MKFYE-GSVGDRMAQLK------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV   67 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~------------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DF   67 (503)
                      |||++ |+|.+++....            ...+++.++..++.|++.||+|||++|++|+||||+||+++.++.++|+||
T Consensus        87 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~  166 (280)
T cd05049          87 FEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDF  166 (280)
T ss_pred             EecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEECCc
Confidence            68998 59999997531            245889999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccC
Q 010713           68 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQE  146 (503)
Q Consensus        68 Gla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~  146 (503)
                      |++........ ........+++.|+|||++.+.   .++.++|||||||++|+|++ |..||......+....+.. ..
T Consensus       167 g~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~-~~  241 (280)
T cd05049         167 GMSRDVYTTDY-YRVGGHTMLPIRWMPPESIMYR---KFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQ-GR  241 (280)
T ss_pred             ccceecccCcc-eecCCCCcccceecChhhhccC---CcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-CC
Confidence            99875432111 1111233456789999998743   68889999999999999998 9999988877777666653 33


Q ss_pred             CCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 010713          147 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  184 (503)
Q Consensus       147 ~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~  184 (503)
                      ....+..++..+.+++.+||+.||++||++.|+++.|+
T Consensus       242 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         242 LLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence            34456778999999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.95  E-value=5.7e-28  Score=244.23  Aligned_cols=181  Identities=20%  Similarity=0.334  Sum_probs=145.7

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++++|.+++.. ....+++.++..++.||+.||+|||++||+||||||+||+++.++.++|+|||++......   .
T Consensus        83 ~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---~  158 (309)
T cd07872          83 FEYLDKDLKQYMDD-CGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVP---T  158 (309)
T ss_pred             EeCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCC---c
Confidence            79999999998864 3456899999999999999999999999999999999999999999999999998654321   1


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC-------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-------------  147 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~-------------  147 (503)
                      .......+++.|+|||++.+.  ..++.++|+|||||++|+|++|+.||.+.+..+....+......             
T Consensus       159 ~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (309)
T cd07872         159 KTYSNEVVTLWYRPPDVLLGS--SEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSND  236 (309)
T ss_pred             cccccccccccccCCHHHhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchh
Confidence            222345678999999998643  25788999999999999999999999887765554444321110             


Q ss_pred             -------C--------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          148 -------P--------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       148 -------~--------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                             +        .....+++++.+||.+||+.||.+|||+.|+++      ++|+..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~------h~~~~~  291 (309)
T cd07872         237 EFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK------HAYFRS  291 (309)
T ss_pred             hhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc------Chhhhh
Confidence                   0        011357889999999999999999999999998      777754

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.95  E-value=1.2e-27  Score=233.10  Aligned_cols=174  Identities=26%  Similarity=0.497  Sum_probs=148.2

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.......++..++..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++......   
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~---  154 (256)
T cd08529          78 MEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDN---  154 (256)
T ss_pred             EEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCc---
Confidence            689974 9999998655678999999999999999999999999999999999999999999999999998765432   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........+++.|+|||++.+.   .++.++|+||||+++|+|++|..||...+..+....+.. ...+.++..++..+.
T Consensus       155 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  230 (256)
T cd08529         155 TNFANTIVGTPYYLSPELCEDK---PYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIR-GVFPPVSQMYSQQLA  230 (256)
T ss_pred             cchhhccccCccccCHHHhcCC---CCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc-CCCCCCccccCHHHH
Confidence            1122345678899999999743   578899999999999999999999988877666665544 334556668899999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 010713          160 NVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ++|.+||+.+|++||++.++++
T Consensus       231 ~~i~~~l~~~p~~Rp~~~~ll~  252 (256)
T cd08529         231 QLIDQCLTKDYRQRPDTFQLLR  252 (256)
T ss_pred             HHHHHHccCCcccCcCHHHHhh
Confidence            9999999999999999999987

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.95  E-value=8.3e-28  Score=238.86  Aligned_cols=178  Identities=23%  Similarity=0.355  Sum_probs=144.9

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||+++ +|.+++.......+++..+..++.||+.||+|||++||+|+||+|+||+++.++.++|+|||++......   
T Consensus        98 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~---  174 (282)
T cd06636          98 MEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT---  174 (282)
T ss_pred             EEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhcc---
Confidence            789985 9999998656677999999999999999999999999999999999999999999999999988654321   


Q ss_pred             CCCCCCccCCCCCCCccccCCCC--CCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA  157 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~--~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~  157 (503)
                      ........+++.|+|||.+....  ...++.++|+|||||++|+|++|..||...........+............++..
T Consensus       175 ~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (282)
T cd06636         175 VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKSKKWSKK  254 (282)
T ss_pred             ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCCCCCcccccCHH
Confidence            11223457889999999986321  2357889999999999999999999998766554444433322222234568899


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          158 VENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +.+||.+||+.||.+||++.|+++
T Consensus       255 ~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         255 FIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             HHHHHHHHhCCChhhCcCHHHHhc
Confidence            999999999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.95  E-value=1e-27  Score=245.48  Aligned_cols=177  Identities=21%  Similarity=0.357  Sum_probs=141.9

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecccCCCcEEEccCCcEEEEecCCcccccCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~-gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~   78 (503)
                      |||++| +|.+++.  ....+++..+..++.|++.||.|||++ +|+||||||+||+++.++.++|+|||++.....   
T Consensus        82 ~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~---  156 (331)
T cd06649          82 MEHMDGGSLDQVLK--EAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---  156 (331)
T ss_pred             eecCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccc---
Confidence            799985 9999986  345689999999999999999999986 699999999999999999999999999875532   


Q ss_pred             CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh---------------
Q 010713           79 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR---------------  143 (503)
Q Consensus        79 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~---------------  143 (503)
                        .......|++.|+|||++.+.   .++.++|+|||||++|+|++|+.||......+....+..               
T Consensus       157 --~~~~~~~g~~~y~aPE~~~~~---~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (331)
T cd06649         157 --SMANSFVGTRSYMSPERLQGT---HYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISP  231 (331)
T ss_pred             --cccccCCCCcCcCCHhHhcCC---CCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCc
Confidence              122345789999999999754   688999999999999999999999976555443221110               


Q ss_pred             ------------------------------ccCCCCC-CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          144 ------------------------------RQEIPPI-PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       144 ------------------------------~~~~~~~-~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                                                    ....+.. ...+++++.+||.+||+.||++|||+.++++      ++|+.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~------h~~~~  305 (331)
T cd06649         232 RPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMN------HTFIK  305 (331)
T ss_pred             ccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhc------ChHHh
Confidence                                          0011111 1247889999999999999999999999998      66654


Q ss_pred             C
Q 010713          193 D  193 (503)
Q Consensus       193 ~  193 (503)
                      .
T Consensus       306 ~  306 (331)
T cd06649         306 R  306 (331)
T ss_pred             h
Confidence            3

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.95  E-value=1.4e-27  Score=235.08  Aligned_cols=181  Identities=20%  Similarity=0.333  Sum_probs=148.0

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||+++ +|.+++.. ..+.+++.++..++.|++.||+|||+.|++|+||||+||+++.++.++|+|||++.........
T Consensus        85 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~  163 (268)
T cd05063          85 TEYMENGALDKYLRD-HDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEG  163 (268)
T ss_pred             EEcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccccccc
Confidence            789985 89888864 4567999999999999999999999999999999999999999999999999998765432211


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      .........+..|+|||++.+.   .++.++|+|||||++|+|++ |..||...+..+....+... ...+.+..++..+
T Consensus       164 ~~~~~~~~~~~~y~~PE~~~~~---~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~  239 (268)
T cd05063         164 TYTTSGGKIPIRWTAPEAIAYR---KFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDG-FRLPAPMDCPSAV  239 (268)
T ss_pred             ceeccCCCcCceecCHHHhhcC---CcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcC-CCCCCCCCCCHHH
Confidence            1111122234579999998743   57889999999999999998 99999887777766666543 3444556789999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhh
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSS  186 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i  186 (503)
                      .+++.+||+.+|++||++.++++.|+++
T Consensus       240 ~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         240 YQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             HHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            9999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>PTZ00284 protein kinase; Provisional

Probab=99.95  E-value=5e-28  Score=259.86  Aligned_cols=176  Identities=18%  Similarity=0.191  Sum_probs=139.9

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecccCCCcEEEccCC----------------cEE
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEAD----------------RAV   63 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs-~gIvHrDLKP~NILld~~~----------------~vK   63 (503)
                      ||++.++|.+++.  +.+.+++.++..++.||+.||+|||+ .||+||||||+|||++.++                .+|
T Consensus       211 ~~~~g~~l~~~l~--~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vk  288 (467)
T PTZ00284        211 MPKYGPCLLDWIM--KHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVR  288 (467)
T ss_pred             EeccCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEE
Confidence            6788889999886  45679999999999999999999998 5999999999999998765                499


Q ss_pred             EEecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q 010713           64 LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR  143 (503)
Q Consensus        64 L~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~  143 (503)
                      |+|||.+....      ......+||+.|+|||++.+.   .++.++|||||||++|||++|+.||.+.+..+....+..
T Consensus       289 l~DfG~~~~~~------~~~~~~~gt~~Y~APE~~~~~---~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~  359 (467)
T PTZ00284        289 ICDLGGCCDER------HSRTAIVSTRHYRSPEVVLGL---GWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEK  359 (467)
T ss_pred             ECCCCccccCc------cccccccCCccccCcHHhhcC---CCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence            99999875421      223456899999999999854   688999999999999999999999988766554433322


Q ss_pred             ccCCC-------------------------CC---------------CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q 010713          144 RQEIP-------------------------PI---------------PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF  183 (503)
Q Consensus       144 ~~~~~-------------------------~~---------------~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L  183 (503)
                      ....+                         ..               ....++.+.+||.+||.+||.+|||+.|+++  
T Consensus       360 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~--  437 (467)
T PTZ00284        360 TLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT--  437 (467)
T ss_pred             HcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc--
Confidence            11100                         00               0012456789999999999999999999998  


Q ss_pred             HhhccCcCCC
Q 010713          184 KSSQNSVHSD  193 (503)
Q Consensus       184 ~~i~~~~~~~  193 (503)
                          |+|+..
T Consensus       438 ----Hp~~~~  443 (467)
T PTZ00284        438 ----HPYVLK  443 (467)
T ss_pred             ----Cccccc
Confidence                888754

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.95  E-value=1.3e-27  Score=236.30  Aligned_cols=179  Identities=22%  Similarity=0.383  Sum_probs=148.8

Q ss_pred             CcCCC-CCHHHHHHhhc--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcc
Q 010713            1 MKFYE-GSVGDRMAQLK--------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH   71 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~--------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~   71 (503)
                      |||++ |+|.+++....        ...+++..++.++.|++.||.|||+++++|+||||+||+++.++.++|+|||++.
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~  167 (277)
T cd05032          88 MELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTR  167 (277)
T ss_pred             EecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCcccch
Confidence            68997 69999996532        2347889999999999999999999999999999999999999999999999987


Q ss_pred             cccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCC
Q 010713           72 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI  150 (503)
Q Consensus        72 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~  150 (503)
                      ....... ........++..|+|||.+.+.   .++.++|+|||||++|++++ |..||.+.+..+....+. ....+..
T Consensus       168 ~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~~  242 (277)
T cd05032         168 DIYETDY-YRKGGKGLLPVRWMAPESLKDG---VFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI-DGGHLDL  242 (277)
T ss_pred             hhccCcc-cccCCCCCccccccCHHHHhcC---CCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHh-cCCCCCC
Confidence            6533221 1112234567889999998643   57889999999999999998 999998888777766665 3445566


Q ss_pred             CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 010713          151 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  184 (503)
Q Consensus       151 ~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~  184 (503)
                      +..++..+.++|.+||+.+|++|||+.++++.|+
T Consensus       243 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         243 PENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence            7788999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.95  E-value=1.8e-27  Score=234.14  Aligned_cols=181  Identities=20%  Similarity=0.342  Sum_probs=149.5

Q ss_pred             CcCCC-CCHHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccC
Q 010713            1 MKFYE-GSVGDRMAQLK----GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG   75 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~----~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~   75 (503)
                      |||++ |+|.+++....    ...+++..++.++.|++.||+|||+++++||||||+||++++++.+||+|||+++....
T Consensus        86 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~  165 (273)
T cd05035          86 LPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYS  165 (273)
T ss_pred             EeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccceeeccc
Confidence            57888 59988885432    24689999999999999999999999999999999999999999999999999876543


Q ss_pred             CCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCC
Q 010713           76 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGL  154 (503)
Q Consensus        76 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~  154 (503)
                      .... ........+..|+|||.+.+.   .++.++|+|||||++|||++ |..||.+....+....+... .....+..+
T Consensus       166 ~~~~-~~~~~~~~~~~~~~pe~~~~~---~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~  240 (273)
T cd05035         166 GDYY-RQGRIAKMPVKWIAIESLADR---VYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHG-NRLKQPEDC  240 (273)
T ss_pred             cccc-cccccccCCccccCHhhcccC---CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCCCCcCC
Confidence            2211 111223346789999998643   67889999999999999999 99999888877777666543 445567889


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhh
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILRVFKSS  186 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i  186 (503)
                      +..+.+++.+||+.||++||++.++++.|+.+
T Consensus       241 ~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         241 LDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            99999999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.95  E-value=1.3e-27  Score=245.38  Aligned_cols=176  Identities=22%  Similarity=0.264  Sum_probs=142.6

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      ||+++++|.+++.   ...+++.++..++.||+.||+|||++||+||||||+||+++.++.+||+|||++.....     
T Consensus        99 ~~~~~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~-----  170 (343)
T cd07878          99 TNLMGADLNNIVK---CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADD-----  170 (343)
T ss_pred             eecCCCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCC-----
Confidence            5777788988773   46799999999999999999999999999999999999999999999999999876532     


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------  148 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~------------  148 (503)
                       ......+|+.|+|||++.+.  ..++.++|||||||++|+|++|..||.+.+..+....+......+            
T Consensus       171 -~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (343)
T cd07878         171 -EMTGYVATRWYRAPEIMLNW--MHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEH  247 (343)
T ss_pred             -CcCCccccccccCchHhcCC--ccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhh
Confidence             22345789999999998742  257889999999999999999999998766555444433211100            


Q ss_pred             ---------C--------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          149 ---------P--------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       149 ---------~--------~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                               .        .....++.+.+||.+||+.||.+|||+.++++      ++|+..
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~------hp~~~~  303 (343)
T cd07878         248 ARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA------HPYFSQ  303 (343)
T ss_pred             HHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc------Ccchhc
Confidence                     0        11245677899999999999999999999998      777754

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.95  E-value=1.2e-27  Score=239.36  Aligned_cols=191  Identities=24%  Similarity=0.350  Sum_probs=161.5

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.  ....+++..+..++.||+.||+|||++|++|+||+|.||+++.++.++|+|||++......   
T Consensus        80 ~e~~~~~~L~~~~~--~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~---  154 (290)
T cd05580          80 MEYVPGGELFSHLR--KSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR---  154 (290)
T ss_pred             EecCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC---
Confidence            78995 69999997  3467999999999999999999999999999999999999999999999999998765331   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                         .....+++.|+|||.+.+.   ..+.++|+||||+++|+|++|..||......+....+..  ....++..++..++
T Consensus       155 ---~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~  226 (290)
T cd05580         155 ---TYTLCGTPEYLAPEIILSK---GYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILE--GKVRFPSFFSPDAK  226 (290)
T ss_pred             ---CCCCCCCccccChhhhcCC---CCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc--CCccCCccCCHHHH
Confidence               2345688999999998743   577899999999999999999999988776666666553  34556778899999


Q ss_pred             HHHHHhhhcCCCCCC-----CHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSS  210 (503)
Q Consensus       160 ~LI~~cL~~DP~~RP-----S~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~  210 (503)
                      ++|.+||..||.+|+     ++.|+++      ++++...+|........+.|..+
T Consensus       227 ~li~~~l~~~p~~R~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~~~  276 (290)
T cd05580         227 DLIRNLLQVDLTKRLGNLKNGVNDIKN------HPWFAGIDWIALLQRKIEAPFIP  276 (290)
T ss_pred             HHHHHHccCCHHHccCcccCCHHHHHc------CcccccCCHHHHhhccCCCCccC
Confidence            999999999999999     7788877      89999999988766655555544

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.95  E-value=1.4e-27  Score=240.03  Aligned_cols=182  Identities=18%  Similarity=0.289  Sum_probs=148.6

Q ss_pred             CcCCC-CCHHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEE
Q 010713            1 MKFYE-GSVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG   65 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~--------------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~   65 (503)
                      |||++ |+|.+++....              ...+++.+++.++.|++.||+|||++||+||||||+||+++.++.+||+
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~  161 (297)
T cd05089          82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIA  161 (297)
T ss_pred             EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEEC
Confidence            68887 59999996422              1358899999999999999999999999999999999999999999999


Q ss_pred             ecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc
Q 010713           66 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR  144 (503)
Q Consensus        66 DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~  144 (503)
                      |||++.....    .........+..|+|||++.+.   .++.++|||||||++|+|++ |..||......+....+...
T Consensus       162 dfg~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~  234 (297)
T cd05089         162 DFGLSRGEEV----YVKKTMGRLPVRWMAIESLNYS---VYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQG  234 (297)
T ss_pred             CcCCCccccc----eeccCCCCcCccccCchhhccC---CCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC
Confidence            9998854321    1111112234579999998743   57889999999999999997 99999988887777666442


Q ss_pred             cCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCc
Q 010713          145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSV  190 (503)
Q Consensus       145 ~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~  190 (503)
                       .....+..++..+.+||.+||+.+|.+||++.++++.|+.+....
T Consensus       235 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~  279 (297)
T cd05089         235 -YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR  279 (297)
T ss_pred             -CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence             344556778999999999999999999999999999998876543

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.95  E-value=2e-27  Score=233.02  Aligned_cols=183  Identities=17%  Similarity=0.296  Sum_probs=146.6

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||+. |+|.+++.. ....++...++.++.|++.||+|||+.+++||||||+||+++.++.+||+|||++.........
T Consensus        76 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~  154 (262)
T cd05058          76 LPYMKHGDLRNFIRS-ETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY  154 (262)
T ss_pred             EecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcce
Confidence            67887 599999864 3455788889999999999999999999999999999999999999999999998754321110


Q ss_pred             -CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHH
Q 010713           80 -SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA  157 (503)
Q Consensus        80 -~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~  157 (503)
                       ........++..|+|||.+.+.   .++.++|||||||++|+|++ |.+||...+..+....+.. ...+..+..++..
T Consensus       155 ~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  230 (262)
T cd05058         155 SVHNHTGAKLPVKWMALESLQTQ---KFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQ-GRRLLQPEYCPDP  230 (262)
T ss_pred             eecccccCcCCccccChhHhccC---ccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhc-CCCCCCCCcCCHH
Confidence             1111233456789999998743   67889999999999999999 5677877766666555443 3344556678899


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          158 VENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      +.+++.+||..+|++||++.++++.|+++.+
T Consensus       231 ~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~  261 (262)
T cd05058         231 LYEVMLSCWHPKPEMRPTFSELVSRIEQIFS  261 (262)
T ss_pred             HHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence            9999999999999999999999999988653

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.95  E-value=1.4e-27  Score=238.41  Aligned_cols=182  Identities=18%  Similarity=0.302  Sum_probs=150.0

Q ss_pred             CcCCC-CCHHHHHHhh--------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEE
Q 010713            1 MKFYE-GSVGDRMAQL--------------KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG   65 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~--------------~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~   65 (503)
                      |||+. |+|.+++...              ....+++..++.++.|++.||+|||+++|+|+||||+||+++.++.++|+
T Consensus        95 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~  174 (293)
T cd05053          95 VEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIA  174 (293)
T ss_pred             EEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeC
Confidence            68887 5999998642              24578999999999999999999999999999999999999999999999


Q ss_pred             ecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc
Q 010713           66 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR  144 (503)
Q Consensus        66 DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~  144 (503)
                      |||++.......... ......++..|+|||.+.+.   .++.++|||||||++|+|++ |..||......+....+.. 
T Consensus       175 Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~-  249 (293)
T cd05053         175 DFGLARDIHHIDYYR-KTTNGRLPVKWMAPEALFDR---VYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKE-  249 (293)
T ss_pred             cccccccccccccee-ccCCCCCCccccCHHHhccC---CcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHc-
Confidence            999987654322111 11222345689999998643   67889999999999999998 9999998887777666544 


Q ss_pred             cCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhc
Q 010713          145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQ  187 (503)
Q Consensus       145 ~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~  187 (503)
                      ...+..+..++..+.+|+.+||..||++|||+.++++.|+.+.
T Consensus       250 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         250 GYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             CCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence            3445566788999999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.95  E-value=1.8e-27  Score=240.57  Aligned_cols=182  Identities=19%  Similarity=0.341  Sum_probs=149.3

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||+. |+|.+++.......+++.++..++.|++.||+|||+++|+|+||||+||+++.++.++|+|||++........ 
T Consensus       118 ~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~-  196 (302)
T cd05055         118 TEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSN-  196 (302)
T ss_pred             EEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccccCCCc-
Confidence            68888 5999999754445589999999999999999999999999999999999999999999999999876533211 


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........++..|+|||.+.+.   .++.++|||||||++|+|++ |..||......+..............+...++.+
T Consensus       197 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (302)
T cd05055         197 YVVKGNARLPVKWMAPESIFNC---VYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHAPAEI  273 (302)
T ss_pred             eeecCCCCcccccCCHhhhccC---CCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCCCCHHH
Confidence            1111233457789999998743   57889999999999999998 9999988776655555544444445566788999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhh
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSS  186 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i  186 (503)
                      .+++.+||+.+|++||++.++++.|++.
T Consensus       274 ~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         274 YDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             HHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence            9999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.95  E-value=1.4e-27  Score=236.92  Aligned_cols=176  Identities=22%  Similarity=0.214  Sum_probs=140.1

Q ss_pred             CcCCCCCHHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEGSVGDRMAQLK-GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~-~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++++|.+++.... ...+++.++..++.||+.||+|||+++++|+||||+||+++.++.++|+|||++......   
T Consensus        78 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---  154 (285)
T cd07861          78 FEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP---  154 (285)
T ss_pred             EecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCC---
Confidence            7899999999987543 367999999999999999999999999999999999999999999999999998654321   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC------------
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI------------  147 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~------------  147 (503)
                      ........+++.|+|||.+.+.  ..++.++|+|||||++|+|++|+.||.+.........+......            
T Consensus       155 ~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (285)
T cd07861         155 VRVYTHEVVTLWYRAPEVLLGS--PRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSL  232 (285)
T ss_pred             cccccCCcccccccChHHhcCC--CCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhh
Confidence            1222334678899999988643  24678999999999999999999999876554333222111000            


Q ss_pred             ---------------CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          148 ---------------PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       148 ---------------~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                                     ......+++++.++|.+||+.||++|||+.++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         233 PDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             HHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence                           0112357899999999999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=5.3e-28  Score=243.20  Aligned_cols=182  Identities=19%  Similarity=0.274  Sum_probs=152.1

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      +|+++.+|.+.++  .+..|+...+..+++||+.||.|+|+.+++||||||.|++++.+..+||+|||+|+..... ...
T Consensus       105 ~elMetDL~~iik--~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~-~~~  181 (359)
T KOG0660|consen  105 FELMETDLHQIIK--SQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKF-FED  181 (359)
T ss_pred             hhHHhhHHHHHHH--cCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeecccc-Ccc
Confidence            5778888999886  4455999999999999999999999999999999999999999999999999999887543 223


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC-------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-------------  147 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~-------------  147 (503)
                      ..++..+.|..|.|||.+..  ...|+.+.||||.|||+.||++|++.|.+.+..+++..+......             
T Consensus       182 ~~mTeYVaTRWYRAPElll~--~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~  259 (359)
T KOG0660|consen  182 GFMTEYVATRWYRAPELLLN--SSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEK  259 (359)
T ss_pred             cchhcceeeeeecCHHHHhc--cccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHH
Confidence            44567889999999999864  347999999999999999999999999998766665555432211             


Q ss_pred             -----------CCC-----CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          148 -----------PPI-----PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       148 -----------~~~-----~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                                 ++.     .+..++...+|+.+||..||.+|+|++|+|+      |++...
T Consensus       260 ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~------hPYl~~  315 (359)
T KOG0660|consen  260 ARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA------HPYLAP  315 (359)
T ss_pred             HHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc------Chhhhh
Confidence                       111     1567899999999999999999999999999      776553

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.95  E-value=2.5e-27  Score=233.77  Aligned_cols=180  Identities=21%  Similarity=0.331  Sum_probs=149.4

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.......+++..++.++.|++.||+|||+++++|+||||+||+++.++.++|+|||.+........ 
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~-  157 (262)
T cd05071          79 TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-  157 (262)
T ss_pred             EEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccccc-
Confidence            78998 4999999754456789999999999999999999999999999999999999999999999999876543211 


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                       .......++..|+|||+..+   ..++.++|+|||||++|+|++ |..||.+....+....+... ...+.+..++..+
T Consensus       158 -~~~~~~~~~~~y~~PE~~~~---~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l  232 (262)
T cd05071         158 -TARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPESL  232 (262)
T ss_pred             -ccccCCcccceecCHhHhcc---CCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcC-CCCCCccccCHHH
Confidence             11123345678999998864   367899999999999999999 89999888777766655432 3344566789999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhh
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSS  186 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i  186 (503)
                      .++|.+|++.||++||++.++++.|+..
T Consensus       233 ~~li~~~l~~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         233 HDLMCQCWRKEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             HHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence            9999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.95  E-value=1.7e-27  Score=236.72  Aligned_cols=180  Identities=19%  Similarity=0.363  Sum_probs=147.3

Q ss_pred             CcCCC-CCHHHHHHhh--------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEE
Q 010713            1 MKFYE-GSVGDRMAQL--------------KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG   65 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~--------------~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~   65 (503)
                      |||+. ++|.+++...              ....+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+
T Consensus        87 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~  166 (283)
T cd05091          87 FSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKIS  166 (283)
T ss_pred             EEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceEec
Confidence            47777 4888888531              12458889999999999999999999999999999999999999999999


Q ss_pred             ecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc
Q 010713           66 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR  144 (503)
Q Consensus        66 DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~  144 (503)
                      |||+++....... ........+++.|+|||.+.+.   .++.++|+|||||++|||++ |..||.+....+....+...
T Consensus       167 Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~  242 (283)
T cd05091         167 DLGLFREVYAADY-YKLMGNSLLPIRWMSPEAIMYG---KFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNR  242 (283)
T ss_pred             ccccccccccchh-eeeccCccCCccccCHHHHhcC---CCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence            9999876533211 1112234567899999998643   57889999999999999998 88999888887777766553


Q ss_pred             cCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHh
Q 010713          145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  185 (503)
Q Consensus       145 ~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~  185 (503)
                       ...+.+..++..+.+++.+||+.+|.+||++.++++.|+.
T Consensus       243 -~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         243 -QVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             -CcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence             3445677899999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.95  E-value=1.8e-27  Score=233.73  Aligned_cols=182  Identities=23%  Similarity=0.332  Sum_probs=154.4

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.  +...++..++..++.||+.||+|||+++++|+||+|+||+++.++.++|+|||++.......  
T Consensus        72 ~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--  147 (262)
T cd05572          72 MEYCLGGELWTILR--DRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--  147 (262)
T ss_pred             EecCCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--
Confidence            68887 59999996  34568999999999999999999999999999999999999999999999999987664321  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHhccCCCCCCCCCcHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS--VDEIYDAVVRRQEIPPIPSGLPPA  157 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~--~~e~~~~i~~~~~~~~~~~~~s~~  157 (503)
                        ......+++.|+|||.+...   .++.++|+||||+++|+|++|..||....  ..+.+..+........++...+++
T Consensus       148 --~~~~~~~~~~~~~PE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (262)
T cd05572         148 --KTWTFCGTPEYVAPEIILNK---GYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKA  222 (262)
T ss_pred             --ccccccCCcCccChhHhcCC---CCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHH
Confidence              22345678899999998643   57889999999999999999999998766  556666665445566677777999


Q ss_pred             HHHHHHHhhhcCCCCCCC-----HHHHHHHHHhhccCcCCCCCCC
Q 010713          158 VENVLLGCFEYDLRSRPL-----MTDILRVFKSSQNSVHSDGGWT  197 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS-----~~elL~~L~~i~~~~~~~~~w~  197 (503)
                      +.++|.+||+.+|++||+     +.|+++      ++|+.+.+|.
T Consensus       223 ~~~~i~~~l~~~p~~R~~~~~~~~~~l~~------~~~~~~~~~~  261 (262)
T cd05572         223 AKDLIKQLLRRNPEERLGNLKGGIKDIKK------HKWFNGFDWE  261 (262)
T ss_pred             HHHHHHHHccCChhhCcCCcccCHHHHhc------ChhhhCCCCC
Confidence            999999999999999999     888888      8998887775

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.95  E-value=1.7e-27  Score=240.01  Aligned_cols=180  Identities=21%  Similarity=0.284  Sum_probs=141.9

Q ss_pred             CcCCC-CCHHHHHHhhc-----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcE
Q 010713            1 MKFYE-GSVGDRMAQLK-----------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRA   62 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~-----------------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~v   62 (503)
                      |||++ |+|.+++....                 ...+++.+++.++.||+.||+|||++||+||||||+|||++.++.+
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~  177 (304)
T cd05096          98 TEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTI  177 (304)
T ss_pred             EecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCCccE
Confidence            78997 59999986431                 1246788999999999999999999999999999999999999999


Q ss_pred             EEEecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh--CCCCCCCCChHHHHHH
Q 010713           63 VLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT--GVQPRCGRSVDEIYDA  140 (503)
Q Consensus        63 KL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt--G~~Pf~~~~~~e~~~~  140 (503)
                      ||+|||++........ ........++..|+|||++...   .++.++||||||+++|+|++  +..||...+..+....
T Consensus       178 kl~DfG~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~  253 (304)
T cd05096         178 KIADFGMSRNLYAGDY-YRIQGRAVLPIRWMAWECILMG---KFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIEN  253 (304)
T ss_pred             EECCCccceecccCce-eEecCcCCCCccccCHHHHhcC---CCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHH
Confidence            9999999876533211 1112234457889999998743   68899999999999999987  6678887766655444


Q ss_pred             HHhc------cCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 010713          141 VVRR------QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  184 (503)
Q Consensus       141 i~~~------~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~  184 (503)
                      +...      ......+..+++.+.+||.+||+.||.+|||+.++.+.|+
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         254 AGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             HHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence            3221      1122345678899999999999999999999999998876

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.95  E-value=4e-28  Score=238.54  Aligned_cols=179  Identities=20%  Similarity=0.260  Sum_probs=151.6

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC---CcEEEEecCCcccccCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA---DRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~---~~vKL~DFGla~~~~~~   76 (503)
                      ||+++| .|++.+.......+++.++..|+.||+.|+.|||+.+|.||||||+|+|....   ..+||+|||+|+.... 
T Consensus       138 mE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~-  216 (400)
T KOG0604|consen  138 MECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQE-  216 (400)
T ss_pred             eecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCC-
Confidence            899995 89999988778889999999999999999999999999999999999999644   4789999999987643 


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHhccCCCCCC-
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV----DEIYDAVVRRQEIPPIP-  151 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~----~e~~~~i~~~~~~~~~~-  151 (503)
                         .....+.+-||.|.|||++..+   .|+..+|+||+|+++|-|++|.+||+...-    ..+..+|.......+-+ 
T Consensus       217 ---~~~L~TPc~TPyYvaPevlg~e---KydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pE  290 (400)
T KOG0604|consen  217 ---PGDLMTPCFTPYYVAPEVLGPE---KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPE  290 (400)
T ss_pred             ---CccccCCcccccccCHHHhCch---hcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChh
Confidence               3456678899999999999855   688999999999999999999999987542    23445555544433333 


Q ss_pred             -CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          152 -SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       152 -~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                       ..+|+..+++|+.+|..+|.+|.|+.++++      ++|..
T Consensus       291 Ws~VSe~aKdlIR~LLkt~PteRlTI~~~m~------hpwi~  326 (400)
T KOG0604|consen  291 WSCVSEAAKDLIRKLLKTEPTERLTIEEVMD------HPWIN  326 (400)
T ss_pred             HhHHHHHHHHHHHHHhcCCchhheeHHHhhc------Cchhc
Confidence             568899999999999999999999999998      76654

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.95  E-value=1.6e-27  Score=235.05  Aligned_cols=180  Identities=27%  Similarity=0.466  Sum_probs=147.1

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.  ....+++..++.++.|++.||+|||+++|+|+||+|+||+++.++.++|+|||++.........
T Consensus        85 ~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~  162 (266)
T cd06651          85 MEYMPGGSVKDQLK--AYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMS  162 (266)
T ss_pred             EeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccccccc
Confidence            688885 8999986  3456899999999999999999999999999999999999999999999999998755322111


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........++..|+|||.+.+.   .++.++|+|||||++|+|++|+.||......+...........+.++..+++.+.
T Consensus       163 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (266)
T cd06651         163 GTGIRSVTGTPYWMSPEVISGE---GYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHAR  239 (266)
T ss_pred             CCccccCCccccccCHHHhCCC---CCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCchhcCHHHH
Confidence            2222345688899999998743   5788999999999999999999999877666555555444445666777899999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          160 NVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      ++| +||..+|++||++.|+++      +++++
T Consensus       240 ~li-~~~~~~p~~Rp~~~eil~------hp~~~  265 (266)
T cd06651         240 DFL-GCIFVEARHRPSAEELLR------HPFAQ  265 (266)
T ss_pred             HHH-HHhcCChhhCcCHHHHhc------Ccccc
Confidence            999 677789999999999988      66653

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.95  E-value=3e-27  Score=232.87  Aligned_cols=180  Identities=19%  Similarity=0.322  Sum_probs=149.0

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.. ..+.+++.+++.++.|++.||+|||+++|+|+||||+||+++.++.++|+|||++.........
T Consensus        84 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~  162 (266)
T cd05033          84 TEYMENGSLDKFLRE-NDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEAT  162 (266)
T ss_pred             EEcCCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccccc
Confidence            689985 99999875 3457999999999999999999999999999999999999999999999999999876421111


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                       .......++..|+|||.+.+.   .++.++|+||||+++|+|++ |..||......+....+... ...+.+..++..+
T Consensus       163 -~~~~~~~~~~~y~~Pe~~~~~---~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l  237 (266)
T cd05033         163 -YTTKGGKIPIRWTAPEAIAYR---KFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDG-YRLPPPMDCPSAL  237 (266)
T ss_pred             -eeccCCCCCccccChhhhccC---CCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCCHHH
Confidence             111123345789999998743   57889999999999999998 99999887777776666543 3344567789999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhh
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSS  186 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i  186 (503)
                      .+++.+||+.+|++||++.++++.|+++
T Consensus       238 ~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         238 YQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             HHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            9999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.95  E-value=1.5e-27  Score=233.37  Aligned_cols=174  Identities=25%  Similarity=0.478  Sum_probs=147.7

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.......+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++......   
T Consensus        77 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~---  153 (255)
T cd08219          77 MEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP---  153 (255)
T ss_pred             EeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccc---
Confidence            68998 59999887655667899999999999999999999999999999999999999999999999998765331   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........+++.|+|||++.+.   .++.++|+||||+++|+|++|..||...+.......+.. ....+.+..++..+.
T Consensus       154 ~~~~~~~~~~~~~~aPE~~~~~---~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  229 (255)
T cd08219         154 GAYACTYVGTPYYVPPEIWENM---PYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQ-GSYKPLPSHYSYELR  229 (255)
T ss_pred             ccccccccCCccccCHHHHccC---CcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhc-CCCCCCCcccCHHHH
Confidence            1122345688899999998754   578899999999999999999999998877766665543 334456677899999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 010713          160 NVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ++|.+||+.||++||++.+++.
T Consensus       230 ~li~~~l~~~P~~Rp~~~~il~  251 (255)
T cd08219         230 SLIKQMFKRNPRSRPSATTILS  251 (255)
T ss_pred             HHHHHHHhCCcccCCCHHHHhh
Confidence            9999999999999999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.95  E-value=2.4e-27  Score=232.24  Aligned_cols=176  Identities=21%  Similarity=0.332  Sum_probs=146.0

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.. ..+.+++..+..++.|++.||+|||++||+|+||||+||+++.++.++|+|||.+........ 
T Consensus        78 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~-  155 (256)
T cd05114          78 TEFMENGCLLNYLRQ-RQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY-  155 (256)
T ss_pred             EEcCCCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCce-
Confidence            78998 589998864 335689999999999999999999999999999999999999999999999998875432111 


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                       .......++..|+|||++.+.   .++.++|+||||+++|+|++ |+.||...+..+....+.... .+..+...+..+
T Consensus       156 -~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~  230 (256)
T cd05114         156 -TSSSGAKFPVKWSPPEVFNFS---KYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGF-RLYRPKLASMTV  230 (256)
T ss_pred             -eccCCCCCchhhCChhhcccC---ccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-CCCCCCCCCHHH
Confidence             111223345689999998743   57889999999999999999 999999888777777765532 344566778999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHH
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVF  183 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L  183 (503)
                      .+++.+||+.+|++||++.++++.|
T Consensus       231 ~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         231 YEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             HHHHHHHccCCcccCcCHHHHHHhh
Confidence            9999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.95  E-value=2.2e-27  Score=230.32  Aligned_cols=181  Identities=20%  Similarity=0.266  Sum_probs=155.4

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      +||++.+|...++. +...|+..++..|+.++++||+|||++.|+||||||.|+|++.+|.+||+|||+++.+...   .
T Consensus        80 fEfm~tdLe~vIkd-~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p---~  155 (318)
T KOG0659|consen   80 FEFMPTDLEVVIKD-KNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSP---N  155 (318)
T ss_pred             EEeccccHHHHhcc-cccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCC---C
Confidence            58999999999975 6778999999999999999999999999999999999999999999999999999988652   3


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC-----------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-----------  149 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~-----------  149 (503)
                      ......+-|..|.|||.+.+.  ..|+...|+||.|||+.||+-+.+-|.+.+.-++...+......|.           
T Consensus       156 ~~~~~~V~TRWYRAPELLfGs--r~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lp  233 (318)
T KOG0659|consen  156 RIQTHQVVTRWYRAPELLFGS--RQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLP  233 (318)
T ss_pred             cccccceeeeeccChHHhccc--hhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccc
Confidence            333445789999999999875  3689999999999999999999999999998888888775433321           


Q ss_pred             ---------------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          150 ---------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       150 ---------------~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                                     +....+.++.+|+.+||.+||.+|+++.|+++      +++|..
T Consensus       234 dY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~------~~yf~~  286 (318)
T KOG0659|consen  234 DYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALK------HPYFKS  286 (318)
T ss_pred             cHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhc------chhhhc
Confidence                           11345678899999999999999999999998      776653

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.95  E-value=1.5e-27  Score=250.53  Aligned_cols=187  Identities=26%  Similarity=0.356  Sum_probs=147.4

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||+.++|.+++.  ....+++.+++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++........ .
T Consensus       165 ~e~~~~~l~~~l~--~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~-~  241 (392)
T PHA03207        165 MPKYKCDLFTYVD--RSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD-T  241 (392)
T ss_pred             ehhcCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccc-c
Confidence            7889999999984  567899999999999999999999999999999999999999999999999999876543221 1


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHhcc------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD---EIYDAVVRRQ------------  145 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~---e~~~~i~~~~------------  145 (503)
                      .......||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+....   ..+..+....            
T Consensus       242 ~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~  318 (392)
T PHA03207        242 PQCYGWSGTLETNSPELLALD---PYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGS  318 (392)
T ss_pred             ccccccccccCccCHhHhcCC---CCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccc
Confidence            122345799999999999744   6889999999999999999999999764321   1111111100            


Q ss_pred             -------------CCCC--CC-----CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCCC
Q 010713          146 -------------EIPP--IP-----SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGH  199 (503)
Q Consensus       146 -------------~~~~--~~-----~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~~  199 (503)
                                   ..++  .+     ..++.++.++|.+||..||++||++.|++.      ++++....|..+
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~------~p~f~~~~~~~~  386 (392)
T PHA03207        319 TNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS------LPLFTKEPINLL  386 (392)
T ss_pred             hhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhh------Cchhhccchhhh
Confidence                         0000  11     245678999999999999999999999999      888887666554

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.95  E-value=1.4e-27  Score=240.23  Aligned_cols=183  Identities=25%  Similarity=0.315  Sum_probs=154.9

Q ss_pred             CcCCCCCHHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCC
Q 010713            1 MKFYEGSVGDRMAQLKG--GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~--~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~   78 (503)
                      |||++-+|.+++.....  ..++...+..+++||+.||+|||+++|+||||||+||||+++|.+||+|||+|+.+.-   
T Consensus        96 fe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~i---  172 (323)
T KOG0594|consen   96 FEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSI---  172 (323)
T ss_pred             EEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcC---
Confidence            68899999999987543  4688899999999999999999999999999999999999999999999999986542   


Q ss_pred             CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC---------
Q 010713           79 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP---------  149 (503)
Q Consensus        79 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~---------  149 (503)
                      +.......++|..|.|||++.+..  .|+...||||+|||++||++++..|.+.+..++...+......|.         
T Consensus       173 p~~~yt~evvTlWYRaPEvLlGs~--~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~  250 (323)
T KOG0594|consen  173 PMRTYTPEVVTLWYRAPEVLLGST--SYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSS  250 (323)
T ss_pred             CcccccccEEEeeccCHHHhcCCC--cCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccc
Confidence            334456778999999999998763  589999999999999999999999999998888888876433321         


Q ss_pred             -------CC------------CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCC
Q 010713          150 -------IP------------SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDG  194 (503)
Q Consensus       150 -------~~------------~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~  194 (503)
                             ++            +..++...+++.+||+++|.+|.|+..+++      |++|...
T Consensus       251 ~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~------h~yf~~~  308 (323)
T KOG0594|consen  251 LPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALT------HPYFSEL  308 (323)
T ss_pred             cccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhc------Chhhccc
Confidence                   11            223357889999999999999999999998      7777654

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.95  E-value=2.8e-27  Score=230.99  Aligned_cols=178  Identities=22%  Similarity=0.317  Sum_probs=144.0

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.. ....+++.+++.++.|++.||+|||+++++|+||||+||+++.++.++|+|||++........ 
T Consensus        72 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~-  149 (252)
T cd05084          72 MELVQGGDFLTFLRT-EGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVY-  149 (252)
T ss_pred             EeeccCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccc-
Confidence            689875 89998864 345689999999999999999999999999999999999999999999999999865432111 


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      .........+..|+|||.+.+.   .++.++|+||||+++|+|++ |..||...........+.. ......+..++..+
T Consensus       150 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  225 (252)
T cd05084         150 ASTGGMKQIPVKWTAPEALNYG---RYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQ-GVRLPCPELCPDAV  225 (252)
T ss_pred             cccCCCCCCceeecCchhhcCC---CCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHc-CCCCCCcccCCHHH
Confidence            1111111234579999998743   57889999999999999998 9999987766655444433 34455677889999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHH
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFK  184 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~  184 (503)
                      .+++.+||+.+|++||++.++++.|+
T Consensus       226 ~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         226 YRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            99999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.95  E-value=2.3e-27  Score=235.30  Aligned_cols=179  Identities=21%  Similarity=0.360  Sum_probs=145.7

Q ss_pred             CcCCC-CCHHHHHHhhc--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcc
Q 010713            1 MKFYE-GSVGDRMAQLK--------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH   71 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~--------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~   71 (503)
                      |||++ |+|.+++....        ...++...++.++.|++.||+|||+.+++|+||||+||+++.++.++|+|||++.
T Consensus        88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~  167 (277)
T cd05062          88 MELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR  167 (277)
T ss_pred             EecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCCCCcc
Confidence            68988 59999986532        1246788899999999999999999999999999999999999999999999986


Q ss_pred             cccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCC
Q 010713           72 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI  150 (503)
Q Consensus        72 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~  150 (503)
                      ........ .......+++.|+|||.+.+.   .++.++|+|||||++|+|++ |..||.+....+....+... ..+..
T Consensus       168 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-~~~~~  242 (277)
T cd05062         168 DIYETDYY-RKGGKGLLPVRWMSPESLKDG---VFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEG-GLLDK  242 (277)
T ss_pred             ccCCccee-ecCCCCccCHhhcChhHhhcC---CcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-CcCCC
Confidence            54322111 111223456789999998743   67899999999999999999 78999888777666655443 34456


Q ss_pred             CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 010713          151 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  184 (503)
Q Consensus       151 ~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~  184 (503)
                      +..++..+.+++.+||+.||++|||+.|+++.|+
T Consensus       243 ~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         243 PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence            6788999999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.95  E-value=1.9e-27  Score=234.15  Aligned_cols=176  Identities=23%  Similarity=0.324  Sum_probs=140.8

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.  ..+.+++.+++.++.|++.||+|||++|++|+||||+||+++.++.++|+|||++......   
T Consensus        85 ~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~---  159 (267)
T cd06645          85 MEFCGGGSLQDIYH--VTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT---  159 (267)
T ss_pred             EeccCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCc---
Confidence            789985 9999886  4567999999999999999999999999999999999999999999999999998655321   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC-C--CCCCcH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-I--PSGLPP  156 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~-~--~~~~s~  156 (503)
                      ........|+..|+|||++.....+.++.++|+|||||++|+|++|..||..................++ .  ...++.
T Consensus       160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (267)
T cd06645         160 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSN  239 (267)
T ss_pred             ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCH
Confidence            1222345789999999997533234578899999999999999999999876554443333322222221 1  124678


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          157 AVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      .+.++|.+||+.+|++||++.++++
T Consensus       240 ~~~~li~~~l~~~P~~R~~~~~ll~  264 (267)
T cd06645         240 SFHHFVKMALTKNPKKRPTAEKLLQ  264 (267)
T ss_pred             HHHHHHHHHccCCchhCcCHHHHhc
Confidence            9999999999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.95  E-value=2.3e-27  Score=234.72  Aligned_cols=179  Identities=20%  Similarity=0.310  Sum_probs=145.8

Q ss_pred             CcCCC-CCHHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEE
Q 010713            1 MKFYE-GSVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG   65 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~--------------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~   65 (503)
                      |||++ |+|.+++....              ...+++.+++.++.|++.||+|||++|++|+||||+||+++.++.++|+
T Consensus        75 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~  154 (270)
T cd05047          75 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA  154 (270)
T ss_pred             EEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEEC
Confidence            78887 69999986432              1358899999999999999999999999999999999999999999999


Q ss_pred             ecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc
Q 010713           66 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR  144 (503)
Q Consensus        66 DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~  144 (503)
                      |||++.....    .........+..|+|||++...   .++.++|+||||+++|+|++ |..||.+.+..+....+.. 
T Consensus       155 dfgl~~~~~~----~~~~~~~~~~~~y~apE~~~~~---~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~-  226 (270)
T cd05047         155 DFGLSRGQEV----YVKKTMGRLPVRWMAIESLNYS---VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-  226 (270)
T ss_pred             CCCCccccch----hhhccCCCCccccCChHHHccC---CCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhC-
Confidence            9998753221    1111122335679999998643   67889999999999999997 9999988777776665543 


Q ss_pred             cCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhc
Q 010713          145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQ  187 (503)
Q Consensus       145 ~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~  187 (503)
                      ......+..++.++.+++.+||..||.+|||+.++++.|+.+.
T Consensus       227 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         227 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             CCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence            2334456678899999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.95  E-value=2.7e-27  Score=232.77  Aligned_cols=181  Identities=19%  Similarity=0.403  Sum_probs=145.2

Q ss_pred             CcCCCC-CHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCC
Q 010713            1 MKFYEG-SVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~--~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~   77 (503)
                      |||++| +|.+++...  ....+++.+++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++...... 
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~-  159 (267)
T cd08229          81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK-  159 (267)
T ss_pred             EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccC-
Confidence            688885 899988643  2456899999999999999999999999999999999999999999999999988765331 


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHhccCCCCCCCCCc
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV--DEIYDAVVRRQEIPPIPSGLP  155 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~--~e~~~~i~~~~~~~~~~~~~s  155 (503)
                        ........++..|+|||.+.+.   .++.++|+||||+++|+|++|..||.+...  .+....+......+..+..++
T Consensus       160 --~~~~~~~~~~~~~~ape~~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (267)
T cd08229         160 --TTAAHSLVGTPYYMSPERIHEN---GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYS  234 (267)
T ss_pred             --CcccccccCCcCccCHHHhcCC---CccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCccccc
Confidence              1122345688899999998743   578899999999999999999999976443  233333332222222335688


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhc
Q 010713          156 PAVENVLLGCFEYDLRSRPLMTDILRVFKSSQ  187 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~  187 (503)
                      ..+.++|.+||..||++|||+.++++.++++.
T Consensus       235 ~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~  266 (267)
T cd08229         235 EELRQLVNMCINPDPEKRPDITYVYDVAKRMH  266 (267)
T ss_pred             HHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence            99999999999999999999999999988763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.95  E-value=2.1e-27  Score=249.91  Aligned_cols=180  Identities=21%  Similarity=0.330  Sum_probs=138.9

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||+.++|.+++.  ....+++.+++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++.......  .
T Consensus       162 ~e~~~~~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~--~  237 (391)
T PHA03212        162 LPRYKTDLYCYLA--AKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN--A  237 (391)
T ss_pred             EecCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccccccc--c
Confidence            6888899999886  34678999999999999999999999999999999999999999999999999986532211  1


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC-------hHHHHHHHHhcc--------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS-------VDEIYDAVVRRQ--------  145 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~-------~~e~~~~i~~~~--------  145 (503)
                      .......||+.|+|||++.+.   .++.++|||||||++|+|++|..||....       .......+....        
T Consensus       238 ~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~  314 (391)
T PHA03212        238 NKYYGWAGTIATNAPELLARD---PYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFP  314 (391)
T ss_pred             cccccccCccCCCChhhhcCC---CCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcC
Confidence            222346799999999999754   68899999999999999999998865321       111111111100        


Q ss_pred             ------------------CCCC--CC-----CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          146 ------------------EIPP--IP-----SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       146 ------------------~~~~--~~-----~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                                        ...+  .+     ..++.++.+||.+||+.||.+|||+.|+++      ++|+..
T Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~------hp~f~~  381 (391)
T PHA03212        315 IDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD------FAAFQD  381 (391)
T ss_pred             cchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc------Chhhcc
Confidence                              0000  00     135678999999999999999999999998      777754

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.95  E-value=1.9e-27  Score=233.85  Aligned_cols=181  Identities=18%  Similarity=0.384  Sum_probs=145.2

Q ss_pred             CcCCCC-CHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCC
Q 010713            1 MKFYEG-SVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~--~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~   77 (503)
                      |||++| +|.+++...  ....+++.++..++.||+.||+|||+++++|+||||+||+++.++.++|+|||++...... 
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~-  159 (267)
T cd08228          81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK-  159 (267)
T ss_pred             EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccch-
Confidence            688884 899888653  2456899999999999999999999999999999999999999999999999988765331 


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHhccCCCCCCCCCc
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV--DEIYDAVVRRQEIPPIPSGLP  155 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~--~e~~~~i~~~~~~~~~~~~~s  155 (503)
                        ........+++.|+|||.+.+.   .++.++|+||||+++|+|++|..||.....  .+....+......+..+..++
T Consensus       160 --~~~~~~~~~~~~~~aPE~~~~~---~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (267)
T cd08228         160 --TTAAHSLVGTPYYMSPERIHEN---GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYS  234 (267)
T ss_pred             --hHHHhcCCCCccccChhhhccC---CCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcC
Confidence              1112345688899999998743   578899999999999999999999965432  333443333222222335678


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhc
Q 010713          156 PAVENVLLGCFEYDLRSRPLMTDILRVFKSSQ  187 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~  187 (503)
                      ..+.++|.+||..+|++||++.++++.|++++
T Consensus       235 ~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~  266 (267)
T cd08228         235 EKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH  266 (267)
T ss_pred             HHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence            89999999999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.95  E-value=2.8e-27  Score=233.55  Aligned_cols=181  Identities=19%  Similarity=0.344  Sum_probs=148.6

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.. ....++..+++.++.|++.||+|||+++++|+||||+||+++.++.++|+|||++.........
T Consensus        84 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~  162 (267)
T cd05066          84 TEYMENGSLDAFLRK-HDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA  162 (267)
T ss_pred             EEcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccce
Confidence            789985 89999864 3457899999999999999999999999999999999999999999999999998765432211


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........++..|+|||.+.+.   .++.++|+||||+++|++++ |..||......+....+... ...+.+..+++.+
T Consensus       163 ~~~~~~~~~~~~y~~pe~~~~~---~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  238 (267)
T cd05066         163 AYTTRGGKIPIRWTAPEAIAYR---KFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEG-YRLPAPMDCPAAL  238 (267)
T ss_pred             eeecCCCccceeecCHhHhccC---ccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCC-CcCCCCCCCCHHH
Confidence            1111222335689999999743   57889999999999999886 99999888777766666543 3344566789999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhh
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSS  186 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i  186 (503)
                      .+++.+||+.+|.+||++.++++.|+.+
T Consensus       239 ~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         239 HQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             HHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence            9999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.95  E-value=2.1e-27  Score=235.87  Aligned_cols=175  Identities=19%  Similarity=0.275  Sum_probs=138.2

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++++|.+++.. ....+++..++.++.||++||.|||+++|+|+||||+||+++.++.++|+|||++......   .
T Consensus        78 ~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~---~  153 (284)
T cd07839          78 FEYCDQDLKKYFDS-CNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP---V  153 (284)
T ss_pred             EecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCC---C
Confidence            68999999998864 3567999999999999999999999999999999999999999999999999998765321   1


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCC-CCCChHHHHHHHHhccC-------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPR-CGRSVDEIYDAVVRRQE-------------  146 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf-~~~~~~e~~~~i~~~~~-------------  146 (503)
                      .......++..|+|||++.+.  ..++.++|+|||||++|+|++|..|+ .+.+..+.+..+.....             
T Consensus       154 ~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
T cd07839         154 RCYSAEVVTLWYRPPDVLFGA--KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKL  231 (284)
T ss_pred             CCcCCCccccCCcChHHHhCC--cccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhc
Confidence            222345678899999998653  24688999999999999999998885 44444443333321100             


Q ss_pred             -----CC---------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          147 -----IP---------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       147 -----~~---------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                           .+         .....+++++.++|.+||+.||.+|||+.++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         232 PDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             ccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence                 00         011346889999999999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.95  E-value=3.1e-27  Score=235.14  Aligned_cols=180  Identities=22%  Similarity=0.401  Sum_probs=147.3

Q ss_pred             CcCCC-CCHHHHHHhhc---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEE
Q 010713            1 MKFYE-GSVGDRMAQLK---------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL   64 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~---------------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL   64 (503)
                      |||++ |+|.+++....               ...+++.+++.++.|++.||+|||+++++|+||||+||+++.++.++|
T Consensus        86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl  165 (283)
T cd05090          86 FEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKI  165 (283)
T ss_pred             EEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEe
Confidence            78998 59999985321               235788999999999999999999999999999999999999999999


Q ss_pred             EecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHh
Q 010713           65 GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR  143 (503)
Q Consensus        65 ~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~  143 (503)
                      +|||++........ ........++..|+|||++.+.   .++.++|+||||+++|+|++ |..||.+.........+..
T Consensus       166 ~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~  241 (283)
T cd05090         166 SDLGLSREIYSADY-YRVQPKSLLPIRWMPPEAIMYG---KFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRK  241 (283)
T ss_pred             ccccccccccCCcc-eecccCCCccceecChHHhccC---CCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence            99999876533211 1112334456789999998743   57889999999999999998 9999988776666555543


Q ss_pred             ccCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHh
Q 010713          144 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  185 (503)
Q Consensus       144 ~~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~  185 (503)
                       ...++.+..+++.+.+++.+||+.||.+||++.++++.|+.
T Consensus       242 -~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         242 -RQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             -CCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence             34455677899999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.95  E-value=3.2e-27  Score=231.62  Aligned_cols=176  Identities=18%  Similarity=0.309  Sum_probs=144.8

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.. ....+++..++.++.||+.||+|||++|++|+||||+||+++.++.++|+|||++.......  
T Consensus        78 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~--  154 (256)
T cd05059          78 TEYMANGCLLNYLRE-RKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQ--  154 (256)
T ss_pred             EecCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceeccccc--
Confidence            689975 89999874 34478999999999999999999999999999999999999999999999999987653211  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........++..|+|||.+.+.   .++.++|+||||+++|+|++ |..||......+....+.. ......+..++..+
T Consensus       155 ~~~~~~~~~~~~y~~Pe~~~~~---~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  230 (256)
T cd05059         155 YTSSQGTKFPVKWAPPEVFDYS---RFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSA-GYRLYRPKLAPTEV  230 (256)
T ss_pred             ccccCCCCCCccccCHHHhccC---CCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHc-CCcCCCCCCCCHHH
Confidence            1111122234579999998743   57889999999999999999 8999988777776665543 33445567789999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHH
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVF  183 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L  183 (503)
                      .+++.+||..+|++||++.++++.|
T Consensus       231 ~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         231 YTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             HHHHHHHhcCChhhCcCHHHHHHHh
Confidence            9999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.95  E-value=2.8e-27  Score=235.67  Aligned_cols=179  Identities=21%  Similarity=0.365  Sum_probs=146.9

Q ss_pred             CcCCC-CCHHHHHHhhcC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEe
Q 010713            1 MKFYE-GSVGDRMAQLKG-------------GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD   66 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~-------------~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~D   66 (503)
                      |||++ |+|.+++.....             ..+++.+++.++.||+.||+|||++|++|+||||+||++++++.++|+|
T Consensus        86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~d  165 (280)
T cd05092          86 FEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGD  165 (280)
T ss_pred             EecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEECC
Confidence            68887 599999875321             3589999999999999999999999999999999999999999999999


Q ss_pred             cCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc
Q 010713           67 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQ  145 (503)
Q Consensus        67 FGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~  145 (503)
                      ||++........ ........+++.|+|||.+.+.   .++.++|+|||||++|+|++ |.+||......+....+... 
T Consensus       166 fg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-  240 (280)
T cd05092         166 FGMSRDIYSTDY-YRVGGRTMLPIRWMPPESILYR---KFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQG-  240 (280)
T ss_pred             CCceeEcCCCce-eecCCCccccccccCHHHhccC---CcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcC-
Confidence            999865432111 1111233456789999998744   57899999999999999998 99999887777766665443 


Q ss_pred             CCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 010713          146 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  184 (503)
Q Consensus       146 ~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~  184 (503)
                      .....+..+++.+.++|.+||+.||.+||++.++++.|+
T Consensus       241 ~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         241 RELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             ccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence            334556788999999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.95  E-value=3.7e-27  Score=237.50  Aligned_cols=183  Identities=16%  Similarity=0.300  Sum_probs=150.8

Q ss_pred             CcCCC-CCHHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEE
Q 010713            1 MKFYE-GSVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG   65 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~--------------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~   65 (503)
                      |||++ |+|.+++....              ...++..+++.++.||+.||+|||++|++||||||+||+++.++.++|+
T Consensus       100 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~  179 (304)
T cd05101         100 VEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIA  179 (304)
T ss_pred             EecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCCCcEEEC
Confidence            68998 59999997532              2357889999999999999999999999999999999999999999999


Q ss_pred             ecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc
Q 010713           66 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR  144 (503)
Q Consensus        66 DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~  144 (503)
                      |||++......... .......++..|+|||++.+.   .++.++||||||+++|+|++ |..||.+.+..+....+...
T Consensus       180 D~g~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~  255 (304)
T cd05101         180 DFGLARDVNNIDYY-KKTTNGRLPVKWMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG  255 (304)
T ss_pred             CCccceeccccccc-ccccCCCCCceeeCchhhccC---CCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC
Confidence            99998765332111 111233456789999998743   57889999999999999998 88999888887777766443


Q ss_pred             cCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       145 ~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                       .....+..++..+.+||.+||..+|++||++.++++.|+++..
T Consensus       256 -~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~  298 (304)
T cd05101         256 -HRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT  298 (304)
T ss_pred             -CcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence             3445567789999999999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.95  E-value=3.3e-27  Score=231.04  Aligned_cols=175  Identities=20%  Similarity=0.356  Sum_probs=146.8

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||+. |+|.+++.......+++..++.++.|++.||.|||++|++||||||+||+++.++.++|+|||++.....    
T Consensus        77 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~----  152 (254)
T cd05083          77 MELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSM----  152 (254)
T ss_pred             EECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccc----
Confidence            78998 5999999765555789999999999999999999999999999999999999999999999999865422    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                        .......+..|+|||.+.+   +.++.++|+||||+++|+|++ |..||......+....+... ..+..+..++..+
T Consensus       153 --~~~~~~~~~~y~~pe~~~~---~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  226 (254)
T cd05083         153 --GVDNSKLPVKWTAPEALKH---KKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKG-YRMEPPEGCPADV  226 (254)
T ss_pred             --cCCCCCCCceecCHHHhcc---CCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCC-CCCCCCCcCCHHH
Confidence              1122234568999999874   367889999999999999998 99999988877766655433 3444566789999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHh
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKS  185 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~  185 (503)
                      .+++.+||+.+|++||++.++++.|+.
T Consensus       227 ~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         227 YVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence            999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.95  E-value=4e-28  Score=239.77  Aligned_cols=178  Identities=25%  Similarity=0.401  Sum_probs=144.9

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+ |+|.+++.......++..++..++.||+.||+|||+++++|+||+++||+++.++.+||+|||++........ 
T Consensus        80 ~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~-  158 (259)
T PF07714_consen   80 MEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK-  158 (259)
T ss_dssp             EE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS-
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence            68998 6999999875567899999999999999999999999999999999999999999999999999876522111 


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ............|+|||.+...   .++.++||||||+++|||++ |+.||.+....+....+.. ...+..+..++..+
T Consensus       159 ~~~~~~~~~~~~~~aPE~~~~~---~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  234 (259)
T PF07714_consen  159 YKNDSSQQLPLRYLAPEVLKDG---EYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQ-GQRLPIPDNCPKDI  234 (259)
T ss_dssp             EEESTTSESGGGGS-HHHHHHS---EESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHT-TEETTSBTTSBHHH
T ss_pred             cccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccccc-cccceeccchhHHH
Confidence            1112234566789999998744   47899999999999999999 7899999888887777744 44556778899999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHH
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVF  183 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L  183 (503)
                      .++|.+||+.||++||++.++++.|
T Consensus       235 ~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  235 YSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             HHHHHHHcCCChhhCcCHHHHHhcC
Confidence            9999999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.95  E-value=3.1e-27  Score=234.69  Aligned_cols=179  Identities=20%  Similarity=0.349  Sum_probs=145.2

Q ss_pred             CcCCC-CCHHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC---cEEEEecCCcc
Q 010713            1 MKFYE-GSVGDRMAQLKG-----GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD---RAVLGDVGIPH   71 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~-----~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~---~vKL~DFGla~   71 (503)
                      |||++ |+|.+++.....     ..+++.+++.++.||+.||+|||+++++|+||||+||+++.++   .++|+|||++.
T Consensus        88 ~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~  167 (277)
T cd05036          88 LELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMAR  167 (277)
T ss_pred             EecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCcccc
Confidence            68997 599999975421     3589999999999999999999999999999999999998764   58999999987


Q ss_pred             cccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCC
Q 010713           72 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI  150 (503)
Q Consensus        72 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~  150 (503)
                      ........ ........+..|+|||++.+.   .++.++|||||||++|+|++ |..||.+....+....+.. ......
T Consensus       168 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~---~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~-~~~~~~  242 (277)
T cd05036         168 DIYRASYY-RKGGRAMLPIKWMPPEAFLDG---IFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTG-GGRLDP  242 (277)
T ss_pred             ccCCccce-ecCCCCCccHhhCCHHHHhcC---CcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc-CCcCCC
Confidence            65321111 111122345689999998743   68899999999999999997 9999998877776655543 344556


Q ss_pred             CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 010713          151 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  184 (503)
Q Consensus       151 ~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~  184 (503)
                      +..++..+.+++.+||+.+|++||++.++++.|+
T Consensus       243 ~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         243 PKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            7788999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=8.7e-28  Score=255.66  Aligned_cols=176  Identities=30%  Similarity=0.444  Sum_probs=150.8

Q ss_pred             CcCCC-CCHHHHHHhhcCCCC--CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEcc-CCcEEEEecCCcccccCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKL--SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE-ADRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~L--s~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~-~~~vKL~DFGla~~~~~~   76 (503)
                      ||-++ |||.+++.. +=+++  ++.++-.|.+||++||.|||++.|+|||||-+|+|++. .|.+||+|||.++.+.+.
T Consensus       651 MEqVPGGSLSsLLrs-kWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi  729 (1226)
T KOG4279|consen  651 MEQVPGGSLSSLLRS-KWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI  729 (1226)
T ss_pred             eecCCCCcHHHHHHh-ccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccC
Confidence            77777 599999976 55677  88999999999999999999999999999999999964 588999999999887653


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhccCCCCCCCCCc
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE-IYDAVVRRQEIPPIPSGLP  155 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e-~~~~i~~~~~~~~~~~~~s  155 (503)
                         .....++.||..|||||++....+ .|..++|||||||++.||.||++||......+ ..-++-.-+..|++|..++
T Consensus       730 ---nP~TETFTGTLQYMAPEvIDqG~R-GYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeels  805 (1226)
T KOG4279|consen  730 ---NPCTETFTGTLQYMAPEVIDQGPR-GYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELS  805 (1226)
T ss_pred             ---CccccccccchhhhChHhhccCCc-CCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHH
Confidence               334467889999999999986644 58999999999999999999999998754433 3334444456788999999


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          156 PAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      .+.+++|.+|+.+||.+||++.++|+
T Consensus       806 aeak~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  806 AEAKNFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             HHHHHHHHHHcCCCcccCccHHHhcc
Confidence            99999999999999999999999998

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.95  E-value=2.9e-27  Score=237.95  Aligned_cols=181  Identities=20%  Similarity=0.317  Sum_probs=145.8

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++++|.+++.. ....+++..+..++.||+.||+|||++||+|+||||+||+++.++.++|+|||++......   .
T Consensus        83 ~e~~~~~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~---~  158 (301)
T cd07873          83 FEYLDKDLKQYLDD-CGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIP---T  158 (301)
T ss_pred             EeccccCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCC---C
Confidence            79999999998875 3457899999999999999999999999999999999999999999999999998654321   1


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC-------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-------------  147 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~-------------  147 (503)
                      .......+++.|+|||++.+.  ..++.++|+||||+++|+|++|.+||...+..+....+......             
T Consensus       159 ~~~~~~~~~~~y~~PE~~~~~--~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (301)
T cd07873         159 KTYSNEVVTLWYRPPDILLGS--TDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNE  236 (301)
T ss_pred             CcccccceeecccCcHHHhCC--CCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccc
Confidence            222344678899999998643  24778999999999999999999999887766554443321110             


Q ss_pred             -------CC--------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          148 -------PP--------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       148 -------~~--------~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                             +.        ....+++.+++||.+||+.||.+|||+.|+++      ++|+..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~------h~~f~~  291 (301)
T cd07873         237 EFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK------HPYFHC  291 (301)
T ss_pred             cccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc------Cccccc
Confidence                   00        11357889999999999999999999999999      777754

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.95  E-value=4.4e-27  Score=230.91  Aligned_cols=179  Identities=21%  Similarity=0.350  Sum_probs=149.5

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||+. |+|.+++.......++..++..++.|++.||+|||+.|++|+||||+||+++.++.++|+|||++.......  
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~--  156 (260)
T cd05067          79 TEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNE--  156 (260)
T ss_pred             EEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCC--
Confidence            68887 599999876556689999999999999999999999999999999999999999999999999987654211  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........++..|+|||++...   .++.++|+||||+++|+|++ |..||.+.+..+....+.. ....+.+..++.++
T Consensus       157 ~~~~~~~~~~~~y~~pe~~~~~---~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  232 (260)
T cd05067         157 YTAREGAKFPIKWTAPEAINYG---TFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLER-GYRMPRPDNCPEEL  232 (260)
T ss_pred             cccccCCcccccccCHHHhccC---CcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHc-CCCCCCCCCCCHHH
Confidence            1111233456789999998743   57889999999999999999 9999988877766665543 33445667789999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHh
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKS  185 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~  185 (503)
                      .++|.+||..+|++||++.+++..|+.
T Consensus       233 ~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         233 YELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             HHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.95  E-value=3.1e-27  Score=238.62  Aligned_cols=184  Identities=18%  Similarity=0.306  Sum_probs=150.0

Q ss_pred             CcCCC-CCHHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEE
Q 010713            1 MKFYE-GSVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG   65 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~--------------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~   65 (503)
                      |||++ |+|.+++....              ...++..+++.++.|++.||+|||++|++|+||||+||+++.++.++|+
T Consensus       103 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~  182 (307)
T cd05098         103 VEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIA  182 (307)
T ss_pred             EecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEEC
Confidence            68998 59999997532              1358899999999999999999999999999999999999999999999


Q ss_pred             ecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc
Q 010713           66 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR  144 (503)
Q Consensus        66 DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~  144 (503)
                      |||++......... .......++..|+|||++.+.   .++.++|+|||||++|+|++ |..||......+....+.. 
T Consensus       183 dfg~a~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~-  257 (307)
T cd05098         183 DFGLARDIHHIDYY-KKTTNGRLPVKWMAPEALFDR---IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE-  257 (307)
T ss_pred             CCcccccccccchh-hccccCCCccceeChHHhccC---CCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHc-
Confidence            99998755321111 111122345689999998743   57889999999999999998 8999988777666655543 


Q ss_pred             cCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       145 ~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      ......+..++.++.+||.+||..+|++||++.++++.|+.+...
T Consensus       258 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~  302 (307)
T cd05098         258 GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL  302 (307)
T ss_pred             CCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence            334556778899999999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.95  E-value=2.9e-27  Score=238.86  Aligned_cols=179  Identities=23%  Similarity=0.232  Sum_probs=134.7

Q ss_pred             CcCCCCCHHHHHHhh-------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEE----ccCCcEEEEecCC
Q 010713            1 MKFYEGSVGDRMAQL-------KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL----NEADRAVLGDVGI   69 (503)
Q Consensus         1 MEy~~GSL~d~L~~~-------~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILl----d~~~~vKL~DFGl   69 (503)
                      |||++++|.+++...       ....+++..+..++.||+.||+|||+++|+||||||+||++    +.++.+||+|||+
T Consensus        79 ~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~  158 (317)
T cd07867          79 FDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF  158 (317)
T ss_pred             EeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence            689999999888532       12358899999999999999999999999999999999999    4567899999999


Q ss_pred             cccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChH---------HHHHH
Q 010713           70 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD---------EIYDA  140 (503)
Q Consensus        70 a~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~---------e~~~~  140 (503)
                      +.................+|+.|+|||++.+.  ..++.++|||||||++|+|+||.+||......         .....
T Consensus       159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~  236 (317)
T cd07867         159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGA--RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDR  236 (317)
T ss_pred             eeccCCCcccccccCcceecccccCcHHhcCC--CccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHH
Confidence            97664332222233455789999999998642  24788999999999999999999999753321         11111


Q ss_pred             HHhccC------------C------------------------CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          141 VVRRQE------------I------------------------PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       141 i~~~~~------------~------------------------~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +.....            .                        .......+..+.+||.+||+.||.+|||+.|+++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~  313 (317)
T cd07867         237 IFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQ  313 (317)
T ss_pred             HHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhc
Confidence            110000            0                        0001224567889999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.95  E-value=5.3e-27  Score=237.91  Aligned_cols=185  Identities=18%  Similarity=0.319  Sum_probs=151.4

Q ss_pred             CcCCC-CCHHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEE
Q 010713            1 MKFYE-GSVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG   65 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~--------------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~   65 (503)
                      |||++ |+|.+++....              ...++..++..++.||+.||+|||++|++|+||||+||+++.++.+||+
T Consensus        97 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~  176 (314)
T cd05099          97 VEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIA  176 (314)
T ss_pred             EecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEc
Confidence            68988 59999996532              2458999999999999999999999999999999999999999999999


Q ss_pred             ecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc
Q 010713           66 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR  144 (503)
Q Consensus        66 DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~  144 (503)
                      |||+++........ .......++..|+|||++.+.   .++.++|+||||+++|+|++ |..||......+.+..+...
T Consensus       177 Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~---~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~  252 (314)
T cd05099         177 DFGLARGVHDIDYY-KKTSNGRLPVKWMAPEALFDR---VYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREG  252 (314)
T ss_pred             cccccccccccccc-cccccCCCCccccCHHHHccC---CcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence            99998765332111 111122344679999998743   67889999999999999999 89999888877777666543


Q ss_pred             cCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCc
Q 010713          145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSV  190 (503)
Q Consensus       145 ~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~  190 (503)
                       .....+..++.++.+++.+||..+|++||++.++++.|+.+....
T Consensus       253 -~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~  297 (314)
T cd05099         253 -HRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV  297 (314)
T ss_pred             -CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence             334556778999999999999999999999999999999886543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.95  E-value=4.3e-27  Score=235.23  Aligned_cols=183  Identities=16%  Similarity=0.307  Sum_probs=149.7

Q ss_pred             CcCCC-CCHHHHHHhhc----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEc
Q 010713            1 MKFYE-GSVGDRMAQLK----------------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN   57 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~----------------------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld   57 (503)
                      |||+. |+|.+++....                      ...++..+++.++.|++.||+|||+++++||||||+||+++
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~  161 (290)
T cd05045          82 VEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVA  161 (290)
T ss_pred             EEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEc
Confidence            68888 59999886421                      13588999999999999999999999999999999999999


Q ss_pred             cCCcEEEEecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHH
Q 010713           58 EADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDE  136 (503)
Q Consensus        58 ~~~~vKL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e  136 (503)
                      +++.++|+|||++........ ........++..|+|||.+.+.   .++.++||||||+++|+|++ |..||.+....+
T Consensus       162 ~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~y~apE~~~~~---~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~  237 (290)
T cd05045         162 EGRKMKISDFGLSRDVYEEDS-YVKRSKGRIPVKWMAIESLFDH---IYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER  237 (290)
T ss_pred             CCCcEEeccccccccccCccc-hhcccCCCCCccccCHHHHccC---CcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence            999999999999876432211 1111233456789999998643   57889999999999999998 999998887777


Q ss_pred             HHHHHHhccCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          137 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       137 ~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      ....+.. ......+..++.++.+++.+||+.+|++||++.++++.|+++.+
T Consensus       238 ~~~~~~~-~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~  288 (290)
T cd05045         238 LFNLLKT-GYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV  288 (290)
T ss_pred             HHHHHhC-CCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence            6665543 33445577889999999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.95  E-value=3.2e-27  Score=234.56  Aligned_cols=195  Identities=23%  Similarity=0.390  Sum_probs=154.4

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ ++|.+++.......+++.++..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.....    
T Consensus        72 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~----  147 (277)
T cd05577          72 MTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKG----  147 (277)
T ss_pred             EecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhcc----
Confidence            68998 4999999764445799999999999999999999999999999999999999999999999998876532    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh--ccCCCCCCCCCcHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR--RQEIPPIPSGLPPA  157 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~--~~~~~~~~~~~s~~  157 (503)
                      ........++..|+|||.+.+.   .++.++|+||||+++|+|++|+.||...........+..  .......+..+++.
T Consensus       148 ~~~~~~~~~~~~y~~PE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (277)
T cd05577         148 GKKIKGRAGTPGYMAPEVLQGE---VYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPE  224 (277)
T ss_pred             CCccccccCCCCcCCHHHhcCC---CCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHH
Confidence            1222345678899999998744   478899999999999999999999976543211111111  11233456678999


Q ss_pred             HHHHHHHhhhcCCCCCC-----CHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCC
Q 010713          158 VENVLLGCFEYDLRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKS  208 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RP-----S~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~  208 (503)
                      +.++|.+||+.||.+||     ++.++++      ++|+...+|.........+|.
T Consensus       225 ~~~li~~~l~~~p~~R~~~~~~~~~~ll~------h~~~~~~~~~~~~~~~~~~~~  274 (277)
T cd05577         225 AKDLCEALLQKDPEKRLGCRGGSADEVRE------HPLFKDLNWRRLEAGMLEPPF  274 (277)
T ss_pred             HHHHHHHHccCChhHccCCCcccHHHHHh------ChhhhcCChhhhhcCCCCCCC
Confidence            99999999999999999     6666766      899988888776555444443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.95  E-value=5.7e-27  Score=229.31  Aligned_cols=176  Identities=21%  Similarity=0.339  Sum_probs=147.7

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ ++|.+++.......+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||.+......   
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~---  155 (256)
T cd05039          79 TEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG---  155 (256)
T ss_pred             EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccc---
Confidence            68998 59999997544457999999999999999999999999999999999999999999999999998765321   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                         ......+..|+|||++...   .++.++|+||||+++|+|++ |..||......+....+.. ......+..+++.+
T Consensus       156 ---~~~~~~~~~~~ape~~~~~---~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  228 (256)
T cd05039         156 ---QDSGKLPVKWTAPEALREK---KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEK-GYRMEAPEGCPPEV  228 (256)
T ss_pred             ---cccCCCcccccCchhhcCC---cCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc-CCCCCCccCCCHHH
Confidence               1123345679999998643   57789999999999999997 9999988877766655543 23445567789999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhh
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSS  186 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i  186 (503)
                      .++|.+||..+|++||++.++++.|+.+
T Consensus       229 ~~li~~~l~~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         229 YKVMKDCWELDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             HHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence            9999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.95  E-value=2.7e-27  Score=239.10  Aligned_cols=181  Identities=19%  Similarity=0.308  Sum_probs=146.8

Q ss_pred             CcCCC-CCHHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEE
Q 010713            1 MKFYE-GSVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG   65 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~--------------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~   65 (503)
                      |||++ |+|.+++....              ...+++.+++.++.||+.||+|||++|++||||||+|||++.++.++|+
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~  166 (303)
T cd05088          87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA  166 (303)
T ss_pred             EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeC
Confidence            68997 59999996432              2368999999999999999999999999999999999999999999999


Q ss_pred             ecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc
Q 010713           66 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR  144 (503)
Q Consensus        66 DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~  144 (503)
                      |||++.....    .........+..|+|||.+.+.   .++.++|||||||++|+|+| |..||...+..+....+.. 
T Consensus       167 dfg~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~-  238 (303)
T cd05088         167 DFGLSRGQEV----YVKKTMGRLPVRWMAIESLNYS---VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-  238 (303)
T ss_pred             ccccCcccch----hhhcccCCCcccccCHHHHhcc---CCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhc-
Confidence            9998854321    1111122345679999988643   57889999999999999998 9999988777766655533 


Q ss_pred             cCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       145 ~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      ......+..+++.+.+||.+||+.+|++||++.++++.|+.+...
T Consensus       239 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~  283 (303)
T cd05088         239 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  283 (303)
T ss_pred             CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            223445566889999999999999999999999999999877543

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.95  E-value=4.4e-27  Score=234.47  Aligned_cols=182  Identities=19%  Similarity=0.333  Sum_probs=141.5

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ ++|.+++.. ....+++.++..++.||+.||+|||++|++||||||+||+++.++.++|+|||++.........
T Consensus        87 ~e~~~g~~L~~~l~~-~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~  165 (284)
T cd05079          87 MEFLPSGSLKEYLPR-NKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEY  165 (284)
T ss_pred             EEccCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccCccc
Confidence            78997 589998864 3346899999999999999999999999999999999999999999999999998765432211


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC--------------hHHHHHHHHhcc
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS--------------VDEIYDAVVRRQ  145 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~--------------~~e~~~~i~~~~  145 (503)
                      ........++..|+|||++.+.   .++.++|+||||+++|+|+++..|+....              ............
T Consensus       166 ~~~~~~~~~~~~y~apE~~~~~---~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (284)
T cd05079         166 YTVKDDLDSPVFWYAPECLIQS---KFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEG  242 (284)
T ss_pred             eeecCCCCCCccccCHHHhccC---CCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcC
Confidence            1122234567789999998743   57889999999999999999876643211              001111122222


Q ss_pred             CCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhh
Q 010713          146 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSS  186 (503)
Q Consensus       146 ~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i  186 (503)
                      ...+.+..++..+.+||.+||+.+|++||++.++++.|+.+
T Consensus       243 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         243 KRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             ccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence            33445677899999999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.95  E-value=4.1e-27  Score=243.23  Aligned_cols=179  Identities=20%  Similarity=0.326  Sum_probs=138.9

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+.      ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++......   
T Consensus       151 ~e~~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~---  221 (353)
T PLN00034        151 LEFMDGGSLEGT------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQT---  221 (353)
T ss_pred             EecCCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccc---
Confidence            789985 65432      34577888999999999999999999999999999999999999999999998765431   


Q ss_pred             CCCCCCccCCCCCCCccccCCCC--CCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHH--HHhccCCCCCCCCCc
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDA--VVRRQEIPPIPSGLP  155 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~--~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~--i~~~~~~~~~~~~~s  155 (503)
                      ........||..|+|||++....  ....+.++|||||||++|+|++|+.||......+....  .......+..+..++
T Consensus       222 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (353)
T PLN00034        222 MDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATAS  301 (353)
T ss_pred             cccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccC
Confidence            11223457899999999985321  11245689999999999999999999974332222111  112223445567889


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCC
Q 010713          156 PAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDG  194 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~  194 (503)
                      .++.+||.+||+.||++||++.|+++      ++|+...
T Consensus       302 ~~l~~li~~~l~~~P~~Rpt~~ell~------hp~~~~~  334 (353)
T PLN00034        302 REFRHFISCCLQREPAKRWSAMQLLQ------HPFILRA  334 (353)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhc------CcccccC
Confidence            99999999999999999999999998      7777653

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.95  E-value=5.8e-27  Score=231.89  Aligned_cols=173  Identities=18%  Similarity=0.244  Sum_probs=139.9

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++|+|.+.+.. ....+++.+++.++.|++.||+|||++|++|+||+|+||+++. +.++|+|||++......    
T Consensus        79 ~e~~~~~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~----  152 (282)
T cd07831          79 FELMDMNLYELIKG-RKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSK----  152 (282)
T ss_pred             EecCCccHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccC----
Confidence            68999999998864 3457899999999999999999999999999999999999999 99999999998765331    


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC-------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-------------  147 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~-------------  147 (503)
                      .......++..|+|||.+...  +.++.++|+|||||++|+|++|..||.+.+..+....+......             
T Consensus       153 ~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (282)
T cd07831         153 PPYTEYISTRWYRAPECLLTD--GYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSR  230 (282)
T ss_pred             CCcCCCCCCcccCChhHhhcC--CCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccc
Confidence            122334678899999987532  24678999999999999999999999887765554444321110             


Q ss_pred             ---CCC-----------CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          148 ---PPI-----------PSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       148 ---~~~-----------~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                         ..+           ...++..+.++|.+||..+|++||++.++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         231 HMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             cccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence               001           1356799999999999999999999999998

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.95  E-value=1.7e-27  Score=234.45  Aligned_cols=176  Identities=23%  Similarity=0.292  Sum_probs=140.3

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||+++ +|.+++.  ....+++.++..++.|++.||+|||+++|+|+||+|+||+++.++.++|+|||++......   
T Consensus        85 ~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~---  159 (267)
T cd06646          85 MEYCGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITAT---  159 (267)
T ss_pred             EeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeeccc---
Confidence            689984 8998886  4567899999999999999999999999999999999999999999999999998765321   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC---CCCCCcH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP---IPSGLPP  156 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~---~~~~~s~  156 (503)
                      ........++..|+|||.+.......++.++|+|||||++|+|++|..||......+....+......++   ....++.
T Consensus       160 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (267)
T cd06646         160 IAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSS  239 (267)
T ss_pred             ccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCH
Confidence            1122345688899999998643344578899999999999999999999976554433322222221211   1245789


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          157 AVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      .+.++|.+||..+|++||++.++++
T Consensus       240 ~~~~li~~~l~~~P~~Rp~~~~il~  264 (267)
T cd06646         240 TFHNFVKISLTKNPKKRPTAERLLT  264 (267)
T ss_pred             HHHHHHHHHhhCChhhCcCHHHHhc
Confidence            9999999999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.95  E-value=6.5e-27  Score=230.97  Aligned_cols=181  Identities=22%  Similarity=0.400  Sum_probs=149.7

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.. ....+++.+++.++.|++.||+|||+++++|+||||+||+++.++.++|+|||++.........
T Consensus        85 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~  163 (270)
T cd05056          85 MELAPLGELRSYLQV-NKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYY  163 (270)
T ss_pred             EEcCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccccce
Confidence            68998 599999964 3446899999999999999999999999999999999999999999999999998765432111


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                        ......++..|+|||.+...   .++.++|+||||+++|+|++ |..||......+....+.. ......+..++..+
T Consensus       164 --~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  237 (270)
T cd05056         164 --KASKGKLPIKWMAPESINFR---RFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIEN-GERLPMPPNCPPTL  237 (270)
T ss_pred             --ecCCCCccccccChhhhccC---CCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc-CCcCCCCCCCCHHH
Confidence              11122345689999998643   57889999999999999986 9999988877766655543 34445677889999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      .++|.+|+..+|++|||+.++++.|+.+..
T Consensus       238 ~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~  267 (270)
T cd05056         238 YSLMTKCWAYDPSKRPRFTELKAQLSDILQ  267 (270)
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            999999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.95  E-value=3.7e-27  Score=237.33  Aligned_cols=177  Identities=12%  Similarity=0.110  Sum_probs=135.8

Q ss_pred             cCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC--
Q 010713            2 KFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP--   79 (503)
Q Consensus         2 Ey~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~--   79 (503)
                      |++..++.+.+..  ....++..+..++.|++.||+|||+++|+||||||+|||++.++.++|+|||+++........  
T Consensus       107 ~~~~~~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~  184 (294)
T PHA02882        107 EKLVENTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIE  184 (294)
T ss_pred             ehhccCHHHHHHh--hccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccc
Confidence            4455577777753  234678889999999999999999999999999999999999999999999999765321111  


Q ss_pred             --CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHH----hc-cCCCCCC
Q 010713           80 --SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV-DEIYDAVV----RR-QEIPPIP  151 (503)
Q Consensus        80 --~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-~e~~~~i~----~~-~~~~~~~  151 (503)
                        ........||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+... ........    .. .......
T Consensus       185 ~~~~~~~~~~gt~~y~ape~~~~~---~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (294)
T PHA02882        185 YSKEQKDLHRGTLYYAGLDAHNGA---CVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIKI  261 (294)
T ss_pred             cccccccccCCCccccCHHHhCCC---CCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhhhcc
Confidence              1122335699999999998754   688999999999999999999999987632 22211110    10 0111123


Q ss_pred             CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q 010713          152 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVF  183 (503)
Q Consensus       152 ~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L  183 (503)
                      ..+++.+.+++..|+..+|++||++.++++.|
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        262 KNANKFIYDFIECVTKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             CCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence            45689999999999999999999999999866

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.95  E-value=6.8e-27  Score=229.22  Aligned_cols=180  Identities=21%  Similarity=0.482  Sum_probs=145.7

Q ss_pred             CcCCCC-CHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCC
Q 010713            1 MKFYEG-SVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~--~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~   77 (503)
                      |||++| +|.+++...  ....+++.+++.++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||++...... 
T Consensus        81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~-  159 (267)
T cd08224          81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSK-  159 (267)
T ss_pred             EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCC-
Confidence            789984 999998653  2456899999999999999999999999999999999999999999999999998765331 


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHhccCCCCCCC-CC
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS--VDEIYDAVVRRQEIPPIPS-GL  154 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~--~~e~~~~i~~~~~~~~~~~-~~  154 (503)
                        ........++..|+|||.+.+.   .++.++|+||||+++|+|++|..||....  ..+....+.. ...++.+. .+
T Consensus       160 --~~~~~~~~~~~~y~apE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  233 (267)
T cd08224         160 --TTAAHSLVGTPYYMSPERIHEN---GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEK-CDYPPLPADHY  233 (267)
T ss_pred             --CcccceecCCccccCHHHhccC---CCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhc-CCCCCCChhhc
Confidence              1122345678899999998743   57889999999999999999999996543  2233333332 22333443 78


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhc
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQ  187 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~  187 (503)
                      +..+.++|.+||..+|++||++.++++.|+.+.
T Consensus       234 ~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         234 SEELRDLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             CHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence            889999999999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.95  E-value=5.3e-27  Score=230.66  Aligned_cols=175  Identities=25%  Similarity=0.421  Sum_probs=144.8

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.  ..+.+++..+..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||++.........
T Consensus        85 ~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~  162 (267)
T cd06628          85 LEYVPGGSVAALLN--NYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLS  162 (267)
T ss_pred             EEecCCCCHHHHHH--hccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccccccc
Confidence            688875 8999996  3467899999999999999999999999999999999999999999999999998766432111


Q ss_pred             ---CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcH
Q 010713           80 ---SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP  156 (503)
Q Consensus        80 ---~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~  156 (503)
                         ........++..|+|||.+.+.   .++.++|+|||||++|+|++|..||...+....+..+.. ...+..+..++.
T Consensus       163 ~~~~~~~~~~~~~~~y~~pe~~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~  238 (267)
T cd06628         163 TKTNGARPSLQGSVFWMAPEVVKQT---SYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE-NASPEIPSNISS  238 (267)
T ss_pred             CCccccccccCCCcCccChhHhccC---CCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhc-cCCCcCCcccCH
Confidence               1112234678899999998743   578899999999999999999999987665554444433 344566778899


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          157 AVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      .+.++|.+||+.||.+||++.++++
T Consensus       239 ~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         239 EAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             HHHHHHHHHccCCchhCcCHHHHhh
Confidence            9999999999999999999999988

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=3.7e-27  Score=231.41  Aligned_cols=178  Identities=22%  Similarity=0.359  Sum_probs=143.1

Q ss_pred             CcCCCC-CHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCC
Q 010713            1 MKFYEG-SVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~--~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~   77 (503)
                      |||+++ +|.+++....  +..+++..+..++.|++.||+|||+++++|+||+|+||+++.++.++|+|||++...... 
T Consensus        88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~-  166 (275)
T cd06608          88 MELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDST-  166 (275)
T ss_pred             EEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccceecccc-
Confidence            689985 8999887543  578999999999999999999999999999999999999999999999999998654321 


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCC--CCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccC-CCCCCCCC
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IPPIPSGL  154 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~--~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~-~~~~~~~~  154 (503)
                        ........++..|+|||.+....  ...++.++|+||||+++|+|++|..||...........+..... ....+..+
T Consensus       167 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (275)
T cd06608         167 --LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENW  244 (275)
T ss_pred             --hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCCCCchhhc
Confidence              12223456889999999885421  23567899999999999999999999987665555444433221 11122347


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +..+.++|.+||..||++|||+.++++
T Consensus       245 ~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         245 SKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             CHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            889999999999999999999999987

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.95  E-value=5e-27  Score=228.87  Aligned_cols=185  Identities=23%  Similarity=0.370  Sum_probs=150.1

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++..  .+.+++..+..++.||+.||+|||+++++|+||+|+||+++.++.++|+|||++.........
T Consensus        72 ~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~  149 (265)
T cd05579          72 MEYLPGGDLASLLEN--VGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQI  149 (265)
T ss_pred             EecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccc
Confidence            688975 99999874  347999999999999999999999999999999999999999999999999988754322110


Q ss_pred             -----CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCC
Q 010713           80 -----SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGL  154 (503)
Q Consensus        80 -----~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~  154 (503)
                           ........++..|+|||.....   ..+.++|+||||+++|+|++|..||......+....+.......+....+
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~---~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (265)
T cd05579         150 NLNDDEKEDKRIVGTPDYIAPEVILGQ---GHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEV  226 (265)
T ss_pred             ccccccccccCcccCccccCHHHhcCC---CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCccccC
Confidence                 1122345678899999998754   47889999999999999999999999888877777665533222222234


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCH---HHHHHHHHhhccCcCCCCCC
Q 010713          155 PPAVENVLLGCFEYDLRSRPLM---TDILRVFKSSQNSVHSDGGW  196 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~---~elL~~L~~i~~~~~~~~~w  196 (503)
                      +..+.+++.+||+.+|.+||++   .++++      ++|+.+.+|
T Consensus       227 ~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~------~~~~~~~~~  265 (265)
T cd05579         227 SDEAIDLISKLLVPDPEKRLGAKSIEEIKN------HPFFKGIDW  265 (265)
T ss_pred             CHHHHHHHHHHhcCCHhhcCCCccHHHHhc------CccccCCCC
Confidence            8999999999999999999999   55555      889888777

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.95  E-value=7.6e-27  Score=233.63  Aligned_cols=188  Identities=20%  Similarity=0.269  Sum_probs=149.8

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.. ....+++.++..++.|++.||+|||+++++|+||||+||+++.++.++|+|||++......   
T Consensus        88 ~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~---  163 (292)
T cd06644          88 IEFCPGGAVDAIMLE-LDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT---  163 (292)
T ss_pred             EecCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccc---
Confidence            789986 67666653 3567999999999999999999999999999999999999999999999999987654221   


Q ss_pred             CCCCCCccCCCCCCCccccCCC--CCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccC-CCCCCCCCcH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPE--VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IPPIPSGLPP  156 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~--~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~-~~~~~~~~s~  156 (503)
                      ........+++.|+|||++.+.  ....++.++|+|||||++|+|++|..||...+..+....+..... ....+..++.
T Consensus       164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (292)
T cd06644         164 LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSM  243 (292)
T ss_pred             ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCH
Confidence            1222345678899999998532  123568899999999999999999999987766655555433221 2234567889


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCC
Q 010713          157 AVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTG  198 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~  198 (503)
                      ++.++|.+||+.+|++||++.++++      ++++....+..
T Consensus       244 ~~~~li~~~l~~~p~~Rp~~~~il~------~~~~~~~~~~~  279 (292)
T cd06644         244 EFRDFLKTALDKHPETRPSAAQLLE------HPFVSSVTSNR  279 (292)
T ss_pred             HHHHHHHHHhcCCcccCcCHHHHhc------Cccccccccch
Confidence            9999999999999999999999988      88877666654

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.95  E-value=5.4e-27  Score=230.57  Aligned_cols=177  Identities=17%  Similarity=0.279  Sum_probs=145.6

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||+. |+|.+++.. ....+++.+++.++.||+.||+|||++|++|+||||+||+++.++.+||+|||.+.......  
T Consensus        78 ~e~~~~~~l~~~i~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~--  154 (256)
T cd05113          78 TEYMSNGCLLNYLRE-HGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE--  154 (256)
T ss_pred             EEcCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCc--
Confidence            78987 589998864 23478999999999999999999999999999999999999999999999999987653321  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........++..|+|||.+.+.   .++.++|+||||+++|+|++ |..||......+....+... .....+...+..+
T Consensus       155 ~~~~~~~~~~~~y~~pe~~~~~---~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  230 (256)
T cd05113         155 YTSSVGSKFPVRWSPPEVLLYS---KFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQG-LRLYRPHLASEKV  230 (256)
T ss_pred             eeecCCCccChhhCCHHHHhcC---cccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcC-CCCCCCCCCCHHH
Confidence            1111123355689999999743   57889999999999999998 99999887777776666543 3344566778999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHH
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFK  184 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~  184 (503)
                      .+++.+||+.+|.+||++.++++.|+
T Consensus       231 ~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         231 YAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             HHHHHHHcCCCcccCCCHHHHHHhhC
Confidence            99999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.95  E-value=4.8e-27  Score=232.91  Aligned_cols=183  Identities=23%  Similarity=0.408  Sum_probs=144.9

Q ss_pred             CcCCCCCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecccCCCcEEEccCCcEEEEecCCcccccCCC
Q 010713            1 MKFYEGSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~GSL~d~L~~~--~~~~Ls~~~vl~i~~QIl~aL~yLHs~-gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~   77 (503)
                      |||++|+|.+++...  ....+++..++.++.||+.||+|||++ +++||||||+||+++.++.+||+|||++...... 
T Consensus        79 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~-  157 (283)
T cd06617          79 MEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS-  157 (283)
T ss_pred             hhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccc-
Confidence            789999999888653  345799999999999999999999998 9999999999999999999999999998765321 


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHhccCCCCCC-CCC
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVR-GPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVVRRQEIPPIP-SGL  154 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~-~~~s~ksDIwSLGviLyeLltG~~Pf~~~~-~~e~~~~i~~~~~~~~~~-~~~  154 (503)
                         .......++..|+|||.+.+... ..++.++|+|||||++|+|++|+.||.... ..+....+... ..+.++ ..+
T Consensus       158 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~  233 (283)
T cd06617         158 ---VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEE-PSPQLPAEKF  233 (283)
T ss_pred             ---cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhc-CCCCCCcccc
Confidence               12223567889999999865322 356889999999999999999999997532 22333333322 223333 457


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCC
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDG  194 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~  194 (503)
                      +.++.++|.+||..+|++||++.++++      ++|+...
T Consensus       234 ~~~l~~li~~~l~~~p~~Rp~~~~il~------~~~~~~~  267 (283)
T cd06617         234 SPEFQDFVNKCLKKNYKERPNYPELLQ------HPFFELH  267 (283)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhc------Cchhhhc
Confidence            899999999999999999999999998      6666543

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.95  E-value=1.7e-27  Score=231.68  Aligned_cols=180  Identities=24%  Similarity=0.455  Sum_probs=146.7

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~-gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||.+.-.+..++.+ -.+++++.-+-++...+++||.||-++ +|+|||+||+|||+|+.|++||||||++-.+..    
T Consensus       170 MelMs~C~ekLlkr-ik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd----  244 (391)
T KOG0983|consen  170 MELMSTCAEKLLKR-IKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD----  244 (391)
T ss_pred             HHHHHHHHHHHHHH-hcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeec----
Confidence            34444334444543 467799999999999999999999865 899999999999999999999999999976644    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHhccCCCCCC--CCCcH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVVRRQEIPPIP--SGLPP  156 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~-~~e~~~~i~~~~~~~~~~--~~~s~  156 (503)
                      +...+...|.+.|||||.+.......|+.++||||||+.++||.||+.||.+.+ .-+...++.+ ..+|.++  ..+++
T Consensus       245 SkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln-~ePP~L~~~~gFSp  323 (391)
T KOG0983|consen  245 SKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN-EEPPLLPGHMGFSP  323 (391)
T ss_pred             ccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh-cCCCCCCcccCcCH
Confidence            333445678999999999987656678999999999999999999999999854 4456666665 3444444  45899


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          157 AVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      .+++|+..||.+|+.+||.+.++++      |+|..
T Consensus       324 ~F~~fv~~CL~kd~r~RP~Y~~Ll~------h~Fi~  353 (391)
T KOG0983|consen  324 DFQSFVKDCLTKDHRKRPKYNKLLE------HPFIK  353 (391)
T ss_pred             HHHHHHHHHhhcCcccCcchHHHhc------Cccee
Confidence            9999999999999999999999998      77654

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.95  E-value=1e-26  Score=226.43  Aligned_cols=177  Identities=21%  Similarity=0.331  Sum_probs=145.3

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.. ....+++.+++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++........ 
T Consensus        71 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-  148 (250)
T cd05085          71 MELVPGGDFLSFLRK-KKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY-  148 (250)
T ss_pred             EECCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceecccccc-
Confidence            78998 589988864 345689999999999999999999999999999999999999999999999999865432111 


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                       .......++..|+|||++...   .++.++|+||||+++|++++ |..||...........+.. ......+..++..+
T Consensus       149 -~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  223 (250)
T cd05085         149 -SSSGLKQIPIKWTAPEALNYG---RYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEK-GYRMSCPQKCPDDV  223 (250)
T ss_pred             -ccCCCCCCcccccCHHHhccC---CCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHc-CCCCCCCCCCCHHH
Confidence             111122345679999998743   57889999999999999998 9999988877666655543 33445567789999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHH
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFK  184 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~  184 (503)
                      .+++.+||+.+|++||++.++++.|.
T Consensus       224 ~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         224 YKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             HHHHHHHcccCcccCCCHHHHHHHhc
Confidence            99999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.95  E-value=7e-27  Score=232.50  Aligned_cols=182  Identities=20%  Similarity=0.296  Sum_probs=147.0

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.. ....+++..+..++.|++.||+|||+.|++|+||||+||+++.++.++|+|||++......   
T Consensus        81 ~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~---  156 (282)
T cd06643          81 IEFCAGGAVDAVMLE-LERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT---  156 (282)
T ss_pred             EEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccc---
Confidence            688985 77776653 4567999999999999999999999999999999999999999999999999998654321   


Q ss_pred             CCCCCCccCCCCCCCccccCCC--CCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-CCCCCCCCCcH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPE--VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-EIPPIPSGLPP  156 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~--~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~-~~~~~~~~~s~  156 (503)
                      ........+++.|+|||++...  ....++.++|+|||||++|+|++|..||...+..+....+.... .....+..++.
T Consensus       157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (282)
T cd06643         157 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSS  236 (282)
T ss_pred             ccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCH
Confidence            1222345688999999998532  13357789999999999999999999998877666555554332 22334567889


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          157 AVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      ++.++|.+||+.||.+||++.++++      ++++.
T Consensus       237 ~~~~li~~~l~~~p~~Rp~~~~il~------~~~~~  266 (282)
T cd06643         237 EFKDFLKKCLEKNVDARWTTTQLLQ------HPFVT  266 (282)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhc------CCCEe
Confidence            9999999999999999999999988      66654

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=6e-27  Score=229.65  Aligned_cols=182  Identities=21%  Similarity=0.378  Sum_probs=149.1

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.  ....+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||++.....    
T Consensus        76 ~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----  149 (260)
T cd05611          76 MEYLNGGDCASLIK--TLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----  149 (260)
T ss_pred             EeccCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc----
Confidence            689985 9999886  346789999999999999999999999999999999999999999999999998865422    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC--CCCCCCCcHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI--PPIPSGLPPA  157 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~--~~~~~~~s~~  157 (503)
                         .....++..|+|||.+.+.   .++.++|+||||+++|+|++|..||...+..+.+..+......  ......+++.
T Consensus       150 ---~~~~~~~~~y~~pe~~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (260)
T cd05611         150 ---NKKFVGTPDYLAPETILGV---GDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPE  223 (260)
T ss_pred             ---cccCCCCcCccChhhhcCC---CCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHH
Confidence               2244678899999998754   4788999999999999999999999988877776666543322  2234468999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCC
Q 010713          158 VENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWT  197 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~  197 (503)
                      +.++|.+||+.+|++||++.++.+.|   .++|+...+|+
T Consensus       224 ~~~~i~~~l~~~p~~R~~~~~~~~~l---~~~~~~~~~~~  260 (260)
T cd05611         224 AVDLINRLLCMDPAKRLGANGYQEIK---SHPFFKSINWD  260 (260)
T ss_pred             HHHHHHHHccCCHHHccCCCcHHHHH---cChHhhcCCCC
Confidence            99999999999999999665443322   27888887774

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.95  E-value=7.9e-27  Score=233.13  Aligned_cols=180  Identities=21%  Similarity=0.308  Sum_probs=144.2

Q ss_pred             CcCCC-CCHHHHHHhhc---------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCc
Q 010713            1 MKFYE-GSVGDRMAQLK---------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP   70 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~---------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla   70 (503)
                      |||++ ++|.+++....         ...+++..++.++.|++.||+|||++|++|+||||+||+++.++.++|+|||++
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~  177 (296)
T cd05051          98 MEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMS  177 (296)
T ss_pred             EecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCCCceEEccccce
Confidence            68887 58999987532         126899999999999999999999999999999999999999999999999998


Q ss_pred             ccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHhc----
Q 010713           71 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT--GVQPRCGRSVDEIYDAVVRR----  144 (503)
Q Consensus        71 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt--G~~Pf~~~~~~e~~~~i~~~----  144 (503)
                      ........ ........++..|+|||++.+.   .++.++|||||||++|+|++  +..||......+.+......    
T Consensus       178 ~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~  253 (296)
T cd05051         178 RNLYSSDY-YRVQGRAPLPIRWMAWESVLLG---KFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDD  253 (296)
T ss_pred             eecccCcc-eeecCcCCCCceecCHHHhhcC---CCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccc
Confidence            76433211 1112234567789999998743   57899999999999999998  77888877666665555432    


Q ss_pred             --cCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 010713          145 --QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  184 (503)
Q Consensus       145 --~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~  184 (503)
                        ......+..++.++.+++.+||+.||.+|||+.++++.|+
T Consensus       254 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         254 GRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             cccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence              1112334567899999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.95  E-value=9.2e-27  Score=231.27  Aligned_cols=176  Identities=23%  Similarity=0.254  Sum_probs=141.8

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++++|.+++.......+++.++..++.|++.||+|||+++++|+||+|+||+++.++.++|+|||++......   .
T Consensus        78 ~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~---~  154 (284)
T cd07860          78 FEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---V  154 (284)
T ss_pred             eeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccC---c
Confidence            7899999999987655678999999999999999999999999999999999999999999999999998654321   1


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------  148 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~------------  148 (503)
                      .......++..|+|||.+.+.  ..++.++|+||||+++|+|+||..||...+..+....+......+            
T Consensus       155 ~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (284)
T cd07860         155 RTYTHEVVTLWYRAPEILLGC--KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLP  232 (284)
T ss_pred             cccccccccccccCCeEEecC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHH
Confidence            122334568899999988643  246788999999999999999999998776554443333211110            


Q ss_pred             ---------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          149 ---------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       149 ---------------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                                     .....+++++.++|.+||+.||.+||++.++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         233 DYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA  280 (284)
T ss_pred             HHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence                           012346788999999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.95  E-value=1.3e-26  Score=230.20  Aligned_cols=182  Identities=20%  Similarity=0.326  Sum_probs=150.5

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.. ....+++..++.++.||+.||+|||+++++|+||||+||+++.++.++|+|||++........ 
T Consensus        87 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~-  164 (279)
T cd05057          87 TQLMPLGCLLDYVRN-HKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEK-  164 (279)
T ss_pred             EecCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCccc-
Confidence            68887 599999875 345699999999999999999999999999999999999999999999999999876542211 


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........++..|+|||.+..   ..++.++|+||||+++|++++ |..||.+....+....+.. ....+.+..++..+
T Consensus       165 ~~~~~~~~~~~~y~~PE~~~~---~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  240 (279)
T cd05057         165 EYHAEGGKVPIKWMALESILH---RIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEK-GERLPQPPICTIDV  240 (279)
T ss_pred             ceecCCCcccccccCHHHhhc---CCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhC-CCCCCCCCCCCHHH
Confidence            111112223568999998863   367889999999999999998 9999998887777666653 34455667788999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      .+++.+||..+|.+||++.++++.|+++..
T Consensus       241 ~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05057         241 YMVLVKCWMIDAESRPTFKELINEFSKMAR  270 (279)
T ss_pred             HHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.95  E-value=1.2e-26  Score=228.03  Aligned_cols=179  Identities=21%  Similarity=0.376  Sum_probs=148.6

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.......++..++..++.|++.||+|||+.|++|+||||+||+++.++.++|+|||.+........ 
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-  157 (260)
T cd05073          79 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-  157 (260)
T ss_pred             EEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCc-
Confidence            68997 5999999765566789999999999999999999999999999999999999999999999999876533211 


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                       .......++..|+|||++...   .++.++|+||||+++|++++ |..||.+.+.......+.. ....+.+...+.++
T Consensus       158 -~~~~~~~~~~~y~~PE~~~~~---~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  232 (260)
T cd05073         158 -TAREGAKFPIKWTAPEAINFG---SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER-GYRMPRPENCPEEL  232 (260)
T ss_pred             -ccccCCcccccccCHhHhccC---CcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhC-CCCCCCcccCCHHH
Confidence             111223456779999998743   57889999999999999999 9999988777666655543 33444567788999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHh
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKS  185 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~  185 (503)
                      .+++.+||+.+|++||++.++++.|+.
T Consensus       233 ~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         233 YNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             HHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.95  E-value=8e-27  Score=232.03  Aligned_cols=182  Identities=20%  Similarity=0.360  Sum_probs=140.6

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.. ....+++..+..++.|++.||+|||++||+|+||||+||+++.++.++|+|||++.........
T Consensus        86 ~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~  164 (284)
T cd05081          86 MEYLPYGSLRDYLQK-HRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEY  164 (284)
T ss_pred             EEecCCCCHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCCCcc
Confidence            68897 599999864 3456899999999999999999999999999999999999999999999999998765332111


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHH---------------HHHHHHhc
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE---------------IYDAVVRR  144 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e---------------~~~~i~~~  144 (503)
                      ........++..|+|||++.+.   .++.++|+||||+++|||++|..++.......               ........
T Consensus       165 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (284)
T cd05081         165 YKVREPGESPIFWYAPESLTES---KFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKN  241 (284)
T ss_pred             eeecCCCCCceEeeCHHHhccC---CcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhc
Confidence            1111122334569999998743   57889999999999999999877654322110               01112222


Q ss_pred             cCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhh
Q 010713          145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSS  186 (503)
Q Consensus       145 ~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i  186 (503)
                      ....+.+..++..+.+||.+||+.+|++|||+.++++.|+.+
T Consensus       242 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         242 NGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             CCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            333445677889999999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.95  E-value=8.9e-27  Score=228.29  Aligned_cols=179  Identities=22%  Similarity=0.353  Sum_probs=148.6

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.......++..++..++.||+.||+|||++|++|+||||+||+++.++.++|+|||++.......  
T Consensus        80 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~--  157 (261)
T cd05034          80 TEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDE--  157 (261)
T ss_pred             EeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchh--
Confidence            688884 99999976555679999999999999999999999999999999999999999999999999987653211  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      .........+..|+|||.+.+.   .++.++|+||||+++|+|++ |+.||.+.........+... ...+.+...+.++
T Consensus       158 ~~~~~~~~~~~~y~~PE~~~~~---~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  233 (261)
T cd05034         158 YTAREGAKFPIKWTAPEAANYG---RFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERG-YRMPRPPNCPEEL  233 (261)
T ss_pred             hhhhhccCCCccccCHHHhccC---CcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCCHHH
Confidence            1111122345689999998743   57889999999999999998 99999888777777666543 3344566779999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHh
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKS  185 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~  185 (503)
                      .+++.+||..+|++||++.++++.|+.
T Consensus       234 ~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         234 YDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             HHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.95  E-value=8e-27  Score=229.70  Aligned_cols=175  Identities=25%  Similarity=0.416  Sum_probs=144.1

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++..  ...+++..++.++.|++.||+|||+++++|+||||+||+++.++.++|+|||++.........
T Consensus        85 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~  162 (265)
T cd06652          85 MEHMPGGSIKDQLKS--YGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLS  162 (265)
T ss_pred             EEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccccccccccc
Confidence            688874 89998863  456899999999999999999999999999999999999999999999999998765332212


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........++..|+|||++.+.   .++.++|+|||||++|+|++|..||...........+......+..+..++..+.
T Consensus       163 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (265)
T cd06652         163 GTGMKSVTGTPYWMSPEVISGE---GYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCR  239 (265)
T ss_pred             ccccccCCCCccccChhhhcCC---CCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchhhCHHHH
Confidence            2223345688899999998753   5788999999999999999999999877655555555444444556777889999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 010713          160 NVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ++|.+|+. +|++||++.++++
T Consensus       240 ~~i~~~l~-~p~~Rp~~~~il~  260 (265)
T cd06652         240 DFLKRIFV-EAKLRPSADELLR  260 (265)
T ss_pred             HHHHHHhc-ChhhCCCHHHHhc
Confidence            99999995 9999999999987

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.94  E-value=1e-26  Score=229.47  Aligned_cols=181  Identities=18%  Similarity=0.327  Sum_probs=146.8

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.. ..+.+++.+++.++.|++.||+|||++|++|+||||+||+++.++.++|+|||++.........
T Consensus        84 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~  162 (269)
T cd05065          84 TEFMENGALDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD  162 (269)
T ss_pred             EecCCCCcHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCccc
Confidence            689985 89888864 3567899999999999999999999999999999999999999999999999998765332211


Q ss_pred             CCCCCCc--cCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcH
Q 010713           80 SSDLPRR--LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP  156 (503)
Q Consensus        80 ~~~~~~~--~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~  156 (503)
                      .......  ..+..|+|||.+.+.   .++.++|+|||||++|||++ |..||...+..+....+.. ....+.+..++.
T Consensus       163 ~~~~~~~~~~~~~~y~~PE~~~~~---~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~-~~~~~~~~~~~~  238 (269)
T cd05065         163 PTYTSSLGGKIPIRWTAPEAIAYR---KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQ-DYRLPPPMDCPT  238 (269)
T ss_pred             cccccccCCCcceeecCHhHhccC---cccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHc-CCcCCCcccCCH
Confidence            1111111  123579999998743   67889999999999999886 9999988877776666643 334445667899


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHHHHHhh
Q 010713          157 AVENVLLGCFEYDLRSRPLMTDILRVFKSS  186 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~RPS~~elL~~L~~i  186 (503)
                      .+.+++.+||+.+|++||++.+++..|+++
T Consensus       239 ~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         239 ALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.94  E-value=1.3e-26  Score=228.07  Aligned_cols=179  Identities=21%  Similarity=0.360  Sum_probs=145.7

Q ss_pred             CcCCC-CCHHHHHHhhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC-----cEEEEecCC
Q 010713            1 MKFYE-GSVGDRMAQLK-----GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD-----RAVLGDVGI   69 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~-----~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~-----~vKL~DFGl   69 (503)
                      |||++ |+|.+++....     ...+++.+++.++.|++.||+|||+++++|+||||+||+++.++     .++|+|||+
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~  157 (269)
T cd05044          78 MELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL  157 (269)
T ss_pred             EeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence            68888 59999997532     23488999999999999999999999999999999999999877     899999999


Q ss_pred             cccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCC
Q 010713           70 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIP  148 (503)
Q Consensus        70 a~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~  148 (503)
                      +........ ........++..|+|||.+.+.   .++.++|+||||+++|+|++ |..||......+....+.. ....
T Consensus       158 ~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~-~~~~  232 (269)
T cd05044         158 ARDIYKSDY-YRKEGEGLLPVRWMAPESLLDG---KFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTA-GGRL  232 (269)
T ss_pred             ccccccccc-cccCcccCCCccccCHHHHccC---CcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhc-CCcc
Confidence            875532211 1111233456789999998743   67899999999999999998 9999988776666555433 3344


Q ss_pred             CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 010713          149 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  184 (503)
Q Consensus       149 ~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~  184 (503)
                      ..+..++..+.++|.+||..+|.+||++.++++.|+
T Consensus       233 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         233 QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             CCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            566778999999999999999999999999999886

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.94  E-value=8e-27  Score=239.53  Aligned_cols=171  Identities=23%  Similarity=0.376  Sum_probs=136.6

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecccCCCcEEEccCCcEEEEecCCcccccCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~-gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~   78 (503)
                      |||++| +|.+++.  ..+.+++..+..++.|++.||+|||++ +|+|+||||+|||++.++.+||+|||++.....   
T Consensus        82 ~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~---  156 (333)
T cd06650          82 MEHMDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---  156 (333)
T ss_pred             EecCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhh---
Confidence            799984 9999996  345789999999999999999999985 799999999999999999999999999865532   


Q ss_pred             CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHH----------------
Q 010713           79 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV----------------  142 (503)
Q Consensus        79 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~----------------  142 (503)
                        .......++..|+|||++.+.   .++.++|+|||||++|+|++|+.||......+....+.                
T Consensus       157 --~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (333)
T cd06650         157 --SMANSFVGTRSYMSPERLQGT---HYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRP  231 (333)
T ss_pred             --hccccCCCCccccCHHHhcCC---CCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCccc
Confidence              122345789999999999754   57889999999999999999999997654433221110                


Q ss_pred             ---------------------------hccCCCCCC-CCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          143 ---------------------------RRQEIPPIP-SGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       143 ---------------------------~~~~~~~~~-~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                                                 .....+..+ ..++.++++||.+||+.||++|||+.|+++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~  298 (333)
T cd06650         232 RPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV  298 (333)
T ss_pred             CCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence                                       001111111 236788999999999999999999999988

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=9.1e-27  Score=227.71  Aligned_cols=177  Identities=23%  Similarity=0.332  Sum_probs=142.8

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.. ....+++.++..++.|++.||+|||+++++|+||+|+||+++.++.++|+|||++......   
T Consensus        79 ~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~---  154 (262)
T cd06613          79 MEYCGGGSLQDIYQV-TRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT---  154 (262)
T ss_pred             EeCCCCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhh---
Confidence            689985 88888764 3367999999999999999999999999999999999999999999999999998765331   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC---CCCCCCcH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP---PIPSGLPP  156 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~---~~~~~~s~  156 (503)
                      ........++..|+|||.+.+.....++.++|+||||+++|+|++|..||...+..+....+......+   ..+..++.
T Consensus       155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (262)
T cd06613         155 IAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSP  234 (262)
T ss_pred             hhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhH
Confidence            112234567889999999875423367889999999999999999999998877655544443332121   12345678


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          157 AVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ++.++|.+||..+|.+||++.+++.
T Consensus       235 ~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         235 VFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHhc
Confidence            8999999999999999999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.94  E-value=1.4e-26  Score=226.25  Aligned_cols=174  Identities=25%  Similarity=0.423  Sum_probs=148.7

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.......+++.++..++.|++.||+|||+.|++|+||+|+||+++.++.+||+|||++.......  
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~--  155 (256)
T cd08221          78 MEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY--  155 (256)
T ss_pred             EEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccc--
Confidence            68998 599999986555679999999999999999999999999999999999999999999999999987653322  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                       .......+++.|+|||.+.+.   .++.++|+||||+++|+|++|..||......+....+.... ..+.+..++.++.
T Consensus       156 -~~~~~~~~~~~y~ape~~~~~---~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  230 (256)
T cd08221         156 -SMAETVVGTPYYMSPELCQGV---KYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGN-YTPVVSVYSSELI  230 (256)
T ss_pred             -ccccccCCCccccCHhhcCCC---CCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCC-CCCCccccCHHHH
Confidence             123445689999999998744   46789999999999999999999999888777776665433 3344567899999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 010713          160 NVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ++|.+||..+|.+||++.++++
T Consensus       231 ~~i~~~l~~~p~~R~s~~~ll~  252 (256)
T cd08221         231 SLVHSLLQQDPEKRPTADEVLD  252 (256)
T ss_pred             HHHHHHcccCcccCCCHHHHhh
Confidence            9999999999999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.94  E-value=1.1e-26  Score=228.42  Aligned_cols=176  Identities=25%  Similarity=0.390  Sum_probs=144.1

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCC-
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL-   78 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~-   78 (503)
                      |||++| +|.+++.  ....+++..+..++.|++.||+|||+.+|+|+||+|+||+++.++.++|+|||++........ 
T Consensus        81 ~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~  158 (265)
T cd06631          81 MEFVPGGSISSILN--RFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLH  158 (265)
T ss_pred             EecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcccc
Confidence            689985 9999986  346789999999999999999999999999999999999999999999999998875432111 


Q ss_pred             --CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-cCCCCCCCCCc
Q 010713           79 --PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR-QEIPPIPSGLP  155 (503)
Q Consensus        79 --~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~-~~~~~~~~~~s  155 (503)
                        .........++..|+|||++.+.   .++.++|+||||+++|+|++|..||...+.......+... ...+..+..++
T Consensus       159 ~~~~~~~~~~~~~~~~~~pe~~~~~---~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (265)
T cd06631         159 GTHSNMLKSMHGTPYWMAPEVINES---GYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFS  235 (265)
T ss_pred             ccccccccccCCCccccChhhhcCC---CCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCC
Confidence              11122345688999999998754   5788999999999999999999999876655444333332 23455677899


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          156 PAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      .++.++|.+||+.+|++||++.++++
T Consensus       236 ~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         236 AAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             HHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            99999999999999999999999987

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.94  E-value=6.3e-27  Score=242.68  Aligned_cols=179  Identities=17%  Similarity=0.282  Sum_probs=136.7

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||+.|+|.+++.. ....+++.+++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++.....    .
T Consensus       136 ~e~~~~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~----~  210 (357)
T PHA03209        136 LPHYSSDLYTYLTK-RSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVV----A  210 (357)
T ss_pred             EEccCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCcccccccc----C
Confidence            68899999999864 456799999999999999999999999999999999999999999999999999865322    1


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCC-CCCChH---------HHHHHHHhc-cC-CC
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPR-CGRSVD---------EIYDAVVRR-QE-IP  148 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf-~~~~~~---------e~~~~i~~~-~~-~~  148 (503)
                      .......||+.|+|||++.+.   .++.++|+|||||++|+|+++..|+ ......         .....+... .. ..
T Consensus       211 ~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  287 (357)
T PHA03209        211 PAFLGLAGTVETNAPEVLARD---KYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPE  287 (357)
T ss_pred             cccccccccccccCCeecCCC---CCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChh
Confidence            122345689999999999754   6889999999999999999865443 331110         011111110 00 00


Q ss_pred             CC------------------------------CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          149 PI------------------------------PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       149 ~~------------------------------~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      .+                              ...++.++.+||.+||+.||.+|||+.|+++      |+|+..
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~------hp~f~~  356 (357)
T PHA03209        288 EFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILN------YPMFAQ  356 (357)
T ss_pred             hcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhc------Cchhcc
Confidence            00                              0245667788999999999999999999999      777653

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.94  E-value=1.6e-26  Score=225.27  Aligned_cols=178  Identities=21%  Similarity=0.346  Sum_probs=144.6

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.. ....++...+..++.|++.||+|||+++++||||||+||+++.++.++|+|||++........ 
T Consensus        71 ~e~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~-  148 (251)
T cd05041          71 MELVPGGSLLTFLRK-KKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIY-  148 (251)
T ss_pred             EEcCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcc-
Confidence            688874 89998864 345789999999999999999999999999999999999999999999999999876532111 


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      .........+..|+|||.+.+.   .++.++|+||||+++|+|++ |..||...........+.. ......+..++..+
T Consensus       149 ~~~~~~~~~~~~y~~PE~~~~~---~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  224 (251)
T cd05041         149 TVSDGLKQIPIKWTAPEALNYG---RYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIES-GYRMPAPQLCPEEI  224 (251)
T ss_pred             eeccccCcceeccCChHhhccC---CCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhc-CCCCCCCccCCHHH
Confidence            1111122335679999998743   67899999999999999999 8999988776665555533 23445567889999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHH
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFK  184 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~  184 (503)
                      .+++.+||..+|++||++.|+++.|+
T Consensus       225 ~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         225 YRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             HHHHHHHhccChhhCcCHHHHHHHhh
Confidence            99999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.94  E-value=7.9e-27  Score=234.94  Aligned_cols=172  Identities=21%  Similarity=0.309  Sum_probs=141.0

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.   ...++..++..++.|++.||+|||++||+|+||||+||+++.++.++|+|||++......   
T Consensus        96 ~e~~~~~~L~~~~~---~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~---  169 (296)
T cd06654          96 MEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE---  169 (296)
T ss_pred             ecccCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhcccc---
Confidence            789985 8999884   356899999999999999999999999999999999999999999999999988754321   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-cCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR-QEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~-~~~~~~~~~~s~~l  158 (503)
                      ........+++.|+|||.+.+.   .++.++|+|||||++|+|++|+.||............... ......+..++..+
T Consensus       170 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  246 (296)
T cd06654         170 QSKRSTMVGTPYWMAPEVVTRK---AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIF  246 (296)
T ss_pred             ccccCcccCCccccCHHHHcCC---CCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHH
Confidence            1112345688999999998743   5788999999999999999999999877664443333222 12223456788999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHH
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      .++|.+||..+|++||++.++++
T Consensus       247 ~~li~~~l~~~p~~Rpt~~eil~  269 (296)
T cd06654         247 RDFLNRCLDMDVEKRGSAKELLQ  269 (296)
T ss_pred             HHHHHHHCcCCcccCcCHHHHhh
Confidence            99999999999999999999998

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.94  E-value=1.1e-26  Score=228.46  Aligned_cols=170  Identities=20%  Similarity=0.309  Sum_probs=137.3

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCc--------EEEEecCCcc
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR--------AVLGDVGIPH   71 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~--------vKL~DFGla~   71 (503)
                      |||+++ +|.+++.. ....+++..++.++.||+.||+|||++||+||||||+||+++.++.        ++++|||++.
T Consensus        78 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~  156 (258)
T cd05078          78 QEYVKFGSLDTYLKK-NKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI  156 (258)
T ss_pred             EecCCCCcHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence            799984 89998864 3446899999999999999999999999999999999999987765        6899999876


Q ss_pred             cccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHhccCCCCC
Q 010713           72 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG-VQPRCGRSVDEIYDAVVRRQEIPPI  150 (503)
Q Consensus        72 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG-~~Pf~~~~~~e~~~~i~~~~~~~~~  150 (503)
                      ....       .....++..|+|||++.+.  ..++.++|+||||+++|+|++| ..||............ .  ....+
T Consensus       157 ~~~~-------~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~-~--~~~~~  224 (258)
T cd05078         157 TVLP-------KEILLERIPWVPPECIENP--QNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFY-E--DRHQL  224 (258)
T ss_pred             ccCC-------chhccccCCccCchhccCC--CCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHH-H--ccccC
Confidence            5422       1234678899999998742  2468899999999999999998 5677665554433322 2  23445


Q ss_pred             CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q 010713          151 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF  183 (503)
Q Consensus       151 ~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L  183 (503)
                      +...+.++.++|.+||+.||++|||+.++++.|
T Consensus       225 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l  257 (258)
T cd05078         225 PAPKWTELANLINQCMDYEPDFRPSFRAIIRDL  257 (258)
T ss_pred             CCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            667778999999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1.1e-26  Score=230.64  Aligned_cols=183  Identities=21%  Similarity=0.339  Sum_probs=148.0

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.. ....+++.++..++.|++.||.|||+++|+|+||||+||+++.++.++|+|||++......   
T Consensus        81 ~e~~~~~~L~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~---  156 (280)
T cd06611          81 IEFCDGGALDSIMLE-LERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST---  156 (280)
T ss_pred             eeccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccc---
Confidence            799986 88888764 3457999999999999999999999999999999999999999999999999987654321   


Q ss_pred             CCCCCCccCCCCCCCccccCCC--CCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccC-CCCCCCCCcH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPE--VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IPPIPSGLPP  156 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~--~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~-~~~~~~~~s~  156 (503)
                      ........+++.|+|||.+...  ....++.++|+||||+++|+|++|..||......+....+..... ....+..++.
T Consensus       157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (280)
T cd06611         157 LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSS  236 (280)
T ss_pred             ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCH
Confidence            1122345688999999998532  123577899999999999999999999988776665555543321 2234567889


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          157 AVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      ++.++|.+||+.+|++||++.++++      ++|+..
T Consensus       237 ~~~~li~~~l~~~p~~Rps~~~il~------~~~~~~  267 (280)
T cd06611         237 SFNDFLKSCLVKDPDDRPTAAELLK------HPFVSD  267 (280)
T ss_pred             HHHHHHHHHhccChhhCcCHHHHhc------Chhhcc
Confidence            9999999999999999999999988      666543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.94  E-value=1.2e-26  Score=245.10  Aligned_cols=165  Identities=18%  Similarity=0.285  Sum_probs=136.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCCCCCCCccCCCCCCCcccc
Q 010713           19 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQW   98 (503)
Q Consensus        19 ~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l   98 (503)
                      .+++.+++.++.||+.||+|||+++|+|+||||+|||++.++.+||+|||++........ ........++..|+|||.+
T Consensus       233 ~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~-~~~~~~~~~~~~y~aPE~~  311 (400)
T cd05105         233 GLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSN-YVSKGSTFLPVKWMAPESI  311 (400)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceecccccc-ccccCCcCCCcceEChhhh
Confidence            478889999999999999999999999999999999999999999999999876533211 1122234567889999998


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHH
Q 010713           99 QPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMT  177 (503)
Q Consensus        99 ~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~  177 (503)
                      .+.   .++.++|||||||++|+|++ |..||..................+..+..++..+.+++.+||+.||++||++.
T Consensus       312 ~~~---~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~  388 (400)
T cd05105         312 FDN---LYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFL  388 (400)
T ss_pred             cCC---CCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHH
Confidence            743   67889999999999999997 99999876554444444444445556778899999999999999999999999


Q ss_pred             HHHHHHHhhc
Q 010713          178 DILRVFKSSQ  187 (503)
Q Consensus       178 elL~~L~~i~  187 (503)
                      ++.+.|+.+.
T Consensus       389 ~l~~~l~~l~  398 (400)
T cd05105         389 HLSDIVESLL  398 (400)
T ss_pred             HHHHHHHHHc
Confidence            9999998764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.94  E-value=1.1e-26  Score=229.22  Aligned_cols=182  Identities=19%  Similarity=0.283  Sum_probs=140.5

Q ss_pred             CcCCC-CCHHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCC
Q 010713            1 MKFYE-GSVGDRMAQLKG---GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~---~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~   76 (503)
                      |||++ |+|.+++.....   ...++..+..++.||+.||+|||+++|+||||||+||+++.++.+||+|||++......
T Consensus        74 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~  153 (269)
T cd05042          74 LEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPE  153 (269)
T ss_pred             EEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccc
Confidence            78998 599999975432   33567888999999999999999999999999999999999999999999988653221


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCC----CCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccC----C
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPE----VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQE----I  147 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~----~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~----~  147 (503)
                      ... .......++..|+|||++...    ....++.++|+|||||++|+|++ |..||......+....+.....    .
T Consensus       154 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  232 (269)
T cd05042         154 DYY-ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPK  232 (269)
T ss_pred             hhe-eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCC
Confidence            100 111233456789999987531    12256789999999999999999 8889988776665555443322    2


Q ss_pred             CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 010713          148 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  184 (503)
Q Consensus       148 ~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~  184 (503)
                      +..+..++..+.+++..|+ .||++||++.++++.|.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         233 PQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             CcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence            2344578899999999999 59999999999999763

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.94  E-value=1.6e-26  Score=238.07  Aligned_cols=166  Identities=20%  Similarity=0.354  Sum_probs=134.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCCCCCCCccCCCCCCCcccc
Q 010713           19 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQW   98 (503)
Q Consensus        19 ~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l   98 (503)
                      .++..++..++.||+.||+|||+++|+||||||+||+++.++.++|+|||++....... .........++..|+|||.+
T Consensus       175 ~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~~~y~aPE~~  253 (343)
T cd05103         175 VLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDP-DYVRKGDARLPLKWMAPETI  253 (343)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCc-chhhcCCCCCCcceECcHHh
Confidence            47888899999999999999999999999999999999999999999999987643211 11111223456789999998


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHH
Q 010713           99 QPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMT  177 (503)
Q Consensus        99 ~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~  177 (503)
                      .+.   .++.++|+||||+++|+|++ |..||.....................+..+++++.+++.+||+.||++||++.
T Consensus       254 ~~~---~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~  330 (343)
T cd05103         254 FDR---VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS  330 (343)
T ss_pred             cCC---CCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHccCChhhCcCHH
Confidence            743   67889999999999999997 99999876544444444444444556667889999999999999999999999


Q ss_pred             HHHHHHHhhcc
Q 010713          178 DILRVFKSSQN  188 (503)
Q Consensus       178 elL~~L~~i~~  188 (503)
                      ++++.|+.+..
T Consensus       331 eil~~l~~~~~  341 (343)
T cd05103         331 ELVEHLGNLLQ  341 (343)
T ss_pred             HHHHHHHHHHh
Confidence            99999988753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.94  E-value=1.3e-26  Score=229.92  Aligned_cols=183  Identities=19%  Similarity=0.277  Sum_probs=148.7

Q ss_pred             CcCCC-CCHHHHHHhhcC------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccc
Q 010713            1 MKFYE-GSVGDRMAQLKG------GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL   73 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~------~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~   73 (503)
                      +||++ |+|.+++.....      ..+++.+++.++.|++.||+|||+++++|+||||+||+++.++.+||+|||+++.+
T Consensus        88 ~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~  167 (280)
T cd05043          88 YPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDL  167 (280)
T ss_pred             EEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCcccc
Confidence            46776 699999865422      46899999999999999999999999999999999999999999999999998765


Q ss_pred             cCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCC
Q 010713           74 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPS  152 (503)
Q Consensus        74 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~  152 (503)
                      ...... .......++..|+|||++.+.   .++.++|||||||++|++++ |..||...+..+....+.. ......+.
T Consensus       168 ~~~~~~-~~~~~~~~~~~y~apE~~~~~---~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~  242 (280)
T cd05043         168 FPMDYH-CLGDNENRPVKWMALESLVNK---EYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKD-GYRLAQPI  242 (280)
T ss_pred             cCCceE-EeCCCCCcchhccCHHHHhcC---CCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHc-CCCCCCCC
Confidence            332111 111223456789999998743   57899999999999999999 9999988777666555443 33344556


Q ss_pred             CCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          153 GLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       153 ~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      .+++++.+++.+||..||++|||+.++++.|+.+..
T Consensus       243 ~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~  278 (280)
T cd05043         243 NCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA  278 (280)
T ss_pred             cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            788999999999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.94  E-value=4.2e-27  Score=238.57  Aligned_cols=170  Identities=19%  Similarity=0.307  Sum_probs=151.3

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||.. |.|+|++.  ..+.|++.+++++++||+.|+.|+|+++++|||||.+|||+|.++++||+|||++..+..    
T Consensus       132 MEYaS~GeLYDYiS--er~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~----  205 (668)
T KOG0611|consen  132 MEYASGGELYDYIS--ERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYAD----  205 (668)
T ss_pred             EEecCCccHHHHHH--HhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhcc----
Confidence            89998 69999998  567899999999999999999999999999999999999999999999999999988765    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ..-..++||+|.|.+||++.+..+  -.+.+|.||||++||.|+.|..||++.+...+..+|..+...   .+.-+....
T Consensus       206 ~kfLqTFCGSPLYASPEIvNG~PY--~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYr---EP~~PSdA~  280 (668)
T KOG0611|consen  206 KKFLQTFCGSPLYASPEIVNGTPY--KGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYR---EPETPSDAS  280 (668)
T ss_pred             ccHHHHhcCCcccCCccccCCCCC--CCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhccccc---CCCCCchHH
Confidence            445568999999999999997632  257899999999999999999999999998888888765432   334567889


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 010713          160 NVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      -||+.||..||++|.|+.+|..
T Consensus       281 gLIRwmLmVNP~RRATieDiAs  302 (668)
T KOG0611|consen  281 GLIRWMLMVNPERRATIEDIAS  302 (668)
T ss_pred             HHHHHHHhcCcccchhHHHHhh
Confidence            9999999999999999999977

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.94  E-value=1.2e-26  Score=239.57  Aligned_cols=175  Identities=19%  Similarity=0.237  Sum_probs=141.4

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++++|.+.+..    .++..++..++.|++.||+|||++||+||||||+||+++.++.++|+|||++......    
T Consensus       100 ~e~~~~~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~----  171 (353)
T cd07850         100 MELMDANLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS----  171 (353)
T ss_pred             EeccCCCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCC----
Confidence            68999999998853    2899999999999999999999999999999999999999999999999999765331    


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC-----------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-----------  149 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~-----------  149 (503)
                      .......++..|+|||++.+.   .++.++|+|||||++|+|++|..||...+....+..+......+.           
T Consensus       172 ~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (353)
T cd07850         172 FMMTPYVVTRYYRAPEVILGM---GYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTV  248 (353)
T ss_pred             CCCCCCcccccccCHHHHhCC---CCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhh
Confidence            122345678899999999754   678999999999999999999999987765544444322111100           


Q ss_pred             ------------------------------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          150 ------------------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       150 ------------------------------~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                                                    .+...+..+.++|.+||+.||++|||+.|+++      ++|+.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~------~~~~~  315 (353)
T cd07850         249 RNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ------HPYIN  315 (353)
T ss_pred             hHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc------ChhHh
Confidence                                          01134667899999999999999999999998      77665

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.94  E-value=1.7e-26  Score=230.68  Aligned_cols=176  Identities=19%  Similarity=0.267  Sum_probs=140.5

Q ss_pred             CcCCCCCHHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEcc-CCcEEEEecCCcccccCC
Q 010713            1 MKFYEGSVGDRMAQLK---GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE-ADRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~---~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~-~~~vKL~DFGla~~~~~~   76 (503)
                      |||++++|.+++....   ...+++.+++.++.||+.||+|||++||+||||||+||+++. ++.++|+|||++......
T Consensus        85 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~  164 (295)
T cd07837          85 FEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIP  164 (295)
T ss_pred             eeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccceecCCC
Confidence            7899999999987542   346899999999999999999999999999999999999998 889999999998754321


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC--------
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP--------  148 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~--------  148 (503)
                         ........+++.|+|||.+.+.  ..++.++|+||||+++|+|++|..||.+.+..+....+......+        
T Consensus       165 ---~~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (295)
T cd07837         165 ---VKSYTHEIVTLWYRAPEVLLGS--THYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGV  239 (295)
T ss_pred             ---ccccCCcccccCCCChHHhhCC--CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcch
Confidence               1122234567899999988642  246889999999999999999999998876655444433211100        


Q ss_pred             ------------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          149 ------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       149 ------------------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                                        .....++..+.++|.+||..||.+||++.+++.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         240 SKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             hhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence                              011357889999999999999999999999998

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.94  E-value=1.5e-26  Score=226.10  Aligned_cols=174  Identities=23%  Similarity=0.442  Sum_probs=147.6

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||+.| +|.+++.......+++.+++.++.|++.||+|||+++++|+||+|+||+++.++.++|+|||++.......  
T Consensus        78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~--  155 (256)
T cd08218          78 MDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV--  155 (256)
T ss_pred             EecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch--
Confidence            688975 99999875445578999999999999999999999999999999999999999999999999987653311  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                       .......+++.|+|||++.+.   .++.++|+||||+++|+|++|..||......+....+... ..+..+..++.++.
T Consensus       156 -~~~~~~~~~~~~~~pe~~~~~---~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  230 (256)
T cd08218         156 -ELARTCIGTPYYLSPEICENR---PYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRG-SYPPVSSHYSYDLR  230 (256)
T ss_pred             -hhhhhccCCccccCHHHhCCC---CCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcC-CCCCCcccCCHHHH
Confidence             112234578899999998743   5778999999999999999999999888777777666543 34456778899999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 010713          160 NVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ++|.+||+.+|.+||++.++++
T Consensus       231 ~li~~~l~~~p~~Rp~~~~vl~  252 (256)
T cd08218         231 NLVSQLFKRNPRDRPSVNSILE  252 (256)
T ss_pred             HHHHHHhhCChhhCcCHHHHhh
Confidence            9999999999999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.94  E-value=2.1e-26  Score=232.63  Aligned_cols=173  Identities=21%  Similarity=0.284  Sum_probs=142.6

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++|+|.+++.. ....+++.++..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++.....     
T Consensus        94 ~e~~~g~l~~~~~~-~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~-----  167 (307)
T cd06607          94 MEYCLGSASDILEV-HKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSP-----  167 (307)
T ss_pred             HHhhCCCHHHHHHH-cccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCC-----
Confidence            68999999888864 345799999999999999999999999999999999999999999999999998865422     


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHHH
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVEN  160 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~~  160 (503)
                        .....+++.|+|||++.+.....++.++|+||||+++|+|++|..||.+.+.......+.........+..++..+.+
T Consensus       168 --~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (307)
T cd06607         168 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRN  245 (307)
T ss_pred             --CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCchhhCHHHHH
Confidence              124467889999999854323467889999999999999999999998876655544443322222223457889999


Q ss_pred             HHHHhhhcCCCCCCCHHHHHH
Q 010713          161 VLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       161 LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +|.+||+.+|++||++.+++.
T Consensus       246 li~~~l~~~p~~Rp~~~~il~  266 (307)
T cd06607         246 FVDSCLQKIPQDRPSSEELLK  266 (307)
T ss_pred             HHHHHhcCChhhCcCHHHHhc
Confidence            999999999999999999987

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.94  E-value=1e-26  Score=237.34  Aligned_cols=186  Identities=12%  Similarity=0.159  Sum_probs=140.9

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.......+++..++.++.|++.||+|||+++|+||||||+||+++.++.++++||+...........
T Consensus        78 ~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~  157 (327)
T cd08227          78 TSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR  157 (327)
T ss_pred             EeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcccccccc
Confidence            68998 59999997654567999999999999999999999999999999999999999999999999865433211100


Q ss_pred             C----CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC--------
Q 010713           80 S----SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI--------  147 (503)
Q Consensus        80 ~----~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~--------  147 (503)
                      .    .......++..|+|||++.+. ...++.++|||||||++|+|++|..||......+...........        
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (327)
T cd08227         158 LRVVHDFPKYSVKVLPWLSPEVLQQN-LQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTI  236 (327)
T ss_pred             ccccccccccccceecccChHHhhcc-cCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccch
Confidence            0    011223567789999998743 235789999999999999999999999875544333222211100        


Q ss_pred             ------------------------------------CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcC
Q 010713          148 ------------------------------------PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVH  191 (503)
Q Consensus       148 ------------------------------------~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~  191 (503)
                                                          .+....+++.+.+||.+||+.||++|||+.++++      ++|+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~------~p~f  310 (327)
T cd08227         237 PAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN------HSFF  310 (327)
T ss_pred             hhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc------Chhh
Confidence                                                0011245678999999999999999999999998      6666


Q ss_pred             CC
Q 010713          192 SD  193 (503)
Q Consensus       192 ~~  193 (503)
                      ..
T Consensus       311 ~~  312 (327)
T cd08227         311 KQ  312 (327)
T ss_pred             hh
Confidence            43

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.94  E-value=2.2e-26  Score=224.26  Aligned_cols=173  Identities=21%  Similarity=0.436  Sum_probs=145.6

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC-cEEEEecCCcccccCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD-RAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~-~vKL~DFGla~~~~~~~~   78 (503)
                      |||++| +|.+++.......+++..+..++.|++.+|+|||++|++|+||+|+||+++.++ .++|+|||++......  
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~--  155 (256)
T cd08220          78 MEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK--  155 (256)
T ss_pred             EecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC--
Confidence            689985 999999765556689999999999999999999999999999999999998654 5799999998765431  


Q ss_pred             CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           79 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        79 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                        .......++..|+|||.+.+.   .++.++|+||||+++|+|++|..||...+.......+... ...+++..++..+
T Consensus       156 --~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l  229 (256)
T cd08220         156 --SKAYTVVGTPCYISPELCEGK---PYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSG-TFAPISDRYSPDL  229 (256)
T ss_pred             --ccccccccCCcccCchhccCC---CCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhc-CCCCCCCCcCHHH
Confidence              122345688899999998743   5788999999999999999999999887776666655443 3345667789999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHH
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      .+++.+||..+|++|||+.++++
T Consensus       230 ~~li~~~l~~~p~~Rpt~~~ll~  252 (256)
T cd08220         230 RQLILSMLNLDPSKRPQLSQIMA  252 (256)
T ss_pred             HHHHHHHccCChhhCCCHHHHhh
Confidence            99999999999999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.94  E-value=2e-26  Score=228.57  Aligned_cols=176  Identities=23%  Similarity=0.351  Sum_probs=142.3

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||+.++|.+++.. ....+++.+++.++.||+.||+|||++|++|+||||+||+++.++.++|+|||++.......  .
T Consensus        78 ~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~--~  154 (286)
T cd07832          78 MEYMPSDLSEVLRD-EERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEE--P  154 (286)
T ss_pred             ecccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC--C
Confidence            68997799999875 34679999999999999999999999999999999999999999999999999987654321  1


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------  148 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~------------  148 (503)
                      .......++..|+|||++.+.  ..++.++||||||+++|+|++|.+||.+....+.+..+......+            
T Consensus       155 ~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (286)
T cd07832         155 RLYSHQVATRWYRAPELLYGA--RKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLP  232 (286)
T ss_pred             CccccccCcccccCceeeecc--ccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcc
Confidence            123345788999999998643  246889999999999999999998888776655554443321111            


Q ss_pred             ----------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          149 ----------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       149 ----------------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                                      ......+..+.++|.+||..+|++||++.++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~  281 (286)
T cd07832         233 DYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR  281 (286)
T ss_pred             hhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence                            011346789999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.94  E-value=1.9e-26  Score=224.25  Aligned_cols=177  Identities=25%  Similarity=0.456  Sum_probs=146.5

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.......+++.++..++.|++.||++||+++++|+||||+||+++.++.++|+|||++.........
T Consensus        80 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~  159 (258)
T smart00219       80 MEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYY  159 (258)
T ss_pred             EeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccccccc
Confidence            789985 9999987533333999999999999999999999999999999999999999999999999998766432111


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ..  ....+++.|+|||.+..   ..++.++|+||||+++|+|++ |..||...+..+....+... .....+..++.++
T Consensus       160 ~~--~~~~~~~~y~~Pe~~~~---~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  233 (258)
T smart00219      160 KK--KGGKLPIRWMAPESLKD---GKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKG-YRLPKPENCPPEI  233 (258)
T ss_pred             cc--ccCCCcccccChHHhcc---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC-CCCCCCCcCCHHH
Confidence            11  12236789999999853   367899999999999999998 89999888777777666543 3445567789999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHH
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVF  183 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L  183 (503)
                      .+++.+||..||++|||+.++++.|
T Consensus       234 ~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      234 YKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             HHHHHHHCcCChhhCcCHHHHHhhC
Confidence            9999999999999999999998854

Phosphotransferases. Tyrosine-specific kinase subfamily.

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=6.4e-27  Score=246.93  Aligned_cols=184  Identities=21%  Similarity=0.315  Sum_probs=154.5

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      +|||+|.--|-+.-.-+..|.+.++.-+++|++.||.|||+++|||||||..|||++-+|.++|+|||.+.....   ..
T Consensus       108 iEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~---t~  184 (1187)
T KOG0579|consen  108 IEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS---TR  184 (1187)
T ss_pred             EeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchh---HH
Confidence            489997444444333577899999999999999999999999999999999999999999999999998754322   22


Q ss_pred             CCCCCccCCCCCCCccccCCC--CCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-CCCCCCCCCcHH
Q 010713           81 SDLPRRLGTPNYMAPEQWQPE--VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-EIPPIPSGLPPA  157 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~--~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~-~~~~~~~~~s~~  157 (503)
                      ....+++|||+|||||+..+.  ...+|++++||||||++|.||..+.+|....++...+-++.... .....|...+..
T Consensus       185 qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~  264 (1187)
T KOG0579|consen  185 QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRS  264 (1187)
T ss_pred             hhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhH
Confidence            334578999999999998764  34589999999999999999999999999999888877776543 223357889999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          158 VENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      +.+|+.+||.+||..||++.++++      |+|+..
T Consensus       265 F~DfLk~cL~Knp~~Rp~aaqll~------Hpfv~~  294 (1187)
T KOG0579|consen  265 FSDFLKRCLVKNPRNRPPAAQLLK------HPFVQN  294 (1187)
T ss_pred             HHHHHHHHHhcCCccCCCHHHHhh------Cccccc
Confidence            999999999999999999999998      766653

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.94  E-value=1.5e-26  Score=233.61  Aligned_cols=181  Identities=22%  Similarity=0.251  Sum_probs=147.5

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++++|.+++.. ....+++.++..++.||+.||+|||++|++|+||||+||+++.++.++|+|||++.......   
T Consensus        87 ~e~~~~~l~~~l~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~---  162 (309)
T cd07845          87 MEYCEQDLASLLDN-MPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA---  162 (309)
T ss_pred             EecCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCcc---
Confidence            78999999999875 34679999999999999999999999999999999999999999999999999987654321   


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------  148 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~------------  148 (503)
                      .......+++.|+|||.+.+.  ..++.++|+|||||++|+|++|..||.+.+..+.+..+......+            
T Consensus       163 ~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (309)
T cd07845         163 KPMTPKVVTLWYRAPELLLGC--TTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLP  240 (309)
T ss_pred             CCCCcccccccccChhhhcCC--CCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhccc
Confidence            122233457889999998643  257889999999999999999999999888777766655421110            


Q ss_pred             -----CC-----------CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          149 -----PI-----------PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       149 -----~~-----------~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                           ..           ....++.+.++|.+||+.||++|||+.++++      ++|+..
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~------h~~f~~  295 (309)
T cd07845         241 LVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE------SSYFKE  295 (309)
T ss_pred             ccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc------Chhhcc
Confidence                 00           0225788999999999999999999999998      888764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1.5e-26  Score=228.81  Aligned_cols=177  Identities=22%  Similarity=0.364  Sum_probs=147.0

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++..   ..+++.++..++.|++.||.|||+++++|+||+|+||++++++.++|+|||++.......  
T Consensus        78 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--  152 (274)
T cd06609          78 MEYCGGGSCLDLLKP---GKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM--  152 (274)
T ss_pred             EEeeCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccc--
Confidence            588885 89998853   389999999999999999999999999999999999999999999999999987764321  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCC-CcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG-LPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~-~s~~l  158 (503)
                       .......+++.|+|||.+.+.   .++.++|+||||+++|+|++|..||...+.......+... ..+..+.. ++..+
T Consensus       153 -~~~~~~~~~~~y~~PE~~~~~---~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  227 (274)
T cd06609         153 -SKRNTFVGTPFWMAPEVIKQS---GYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKN-NPPSLEGNKFSKPF  227 (274)
T ss_pred             -cccccccCCccccChhhhccC---CCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhc-CCCCCcccccCHHH
Confidence             223345688899999999754   5889999999999999999999999877665555444433 33344444 88999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      .+++.+||..+|++||++.++++      ++|+..
T Consensus       228 ~~~l~~~l~~~p~~Rpt~~~il~------~~~~~~  256 (274)
T cd06609         228 KDFVSLCLNKDPKERPSAKELLK------HKFIKK  256 (274)
T ss_pred             HHHHHHHhhCChhhCcCHHHHhh------ChhhcC
Confidence            99999999999999999999998      666543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.94  E-value=1.4e-26  Score=233.00  Aligned_cols=177  Identities=19%  Similarity=0.298  Sum_probs=143.9

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.   .+.+++.++..++.||+.||+|||+++|+||||||+||+++.++.++|+|||++......   
T Consensus        98 ~e~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~---  171 (292)
T cd06658          98 MEFLEGGALTDIVT---HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE---  171 (292)
T ss_pred             EeCCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccc---
Confidence            789986 7888773   456899999999999999999999999999999999999999999999999998654321   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-CCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-EIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~-~~~~~~~~~s~~l  158 (503)
                      ........++..|+|||.+.+.   .++.++|+||||+++|+|++|..||......+....+.... ........++..+
T Consensus       172 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (292)
T cd06658         172 VPKRKSLVGTPYWMAPEVISRL---PYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVL  248 (292)
T ss_pred             cccCceeecCccccCHHHHccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHH
Confidence            1222345688999999998743   57889999999999999999999998877666555443321 1112234578899


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      .+++.+||..||.+|||+.++++      ++|+.
T Consensus       249 ~~li~~~l~~~P~~Rpt~~~il~------~~~~~  276 (292)
T cd06658         249 RGFLDLMLVREPSQRATAQELLQ------HPFLK  276 (292)
T ss_pred             HHHHHHHccCChhHCcCHHHHhh------Chhhh
Confidence            99999999999999999999998      66654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.94  E-value=2.5e-26  Score=223.98  Aligned_cols=174  Identities=23%  Similarity=0.400  Sum_probs=147.5

Q ss_pred             CcCCCC-CHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHH-----HCCCeecccCCCcEEEccCCcEEEEecCCccc
Q 010713            1 MKFYEG-SVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLH-----SKGILVLNLKPFNFILNEADRAVLGDVGIPHL   72 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~--~~~~Ls~~~vl~i~~QIl~aL~yLH-----s~gIvHrDLKP~NILld~~~~vKL~DFGla~~   72 (503)
                      |||+++ +|.+++...  ....+++.+++.++.||+.||+|||     +.+++|+||+|+||+++.++.++|+|||++..
T Consensus        80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~  159 (265)
T cd08217          80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKI  159 (265)
T ss_pred             ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccc
Confidence            789984 999998754  2567999999999999999999999     89999999999999999999999999999877


Q ss_pred             ccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCC
Q 010713           73 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS  152 (503)
Q Consensus        73 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~  152 (503)
                      .....   .......+++.|+|||.+.+.   .++.++|+||||+++|+|++|..||......+....+. ....+.++.
T Consensus       160 ~~~~~---~~~~~~~~~~~~~~pE~~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~  232 (265)
T cd08217         160 LGHDS---SFAKTYVGTPYYMSPEQLNHM---SYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIK-EGKFRRIPY  232 (265)
T ss_pred             ccCCc---ccccccccCCCccChhhhcCC---CCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHh-cCCCCCCcc
Confidence            64321   112345688999999998743   57889999999999999999999999877665555543 334456777


Q ss_pred             CCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          153 GLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       153 ~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      .++..+.+++.+||+.+|++||++.++++
T Consensus       233 ~~~~~~~~l~~~~l~~~p~~Rp~~~~il~  261 (265)
T cd08217         233 RYSSELNEVIKSMLNVDPDKRPSTEELLQ  261 (265)
T ss_pred             ccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence            89999999999999999999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.94  E-value=1.8e-26  Score=228.09  Aligned_cols=179  Identities=18%  Similarity=0.348  Sum_probs=147.3

Q ss_pred             CcCCC-CCHHHHHHhhcC-------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCccc
Q 010713            1 MKFYE-GSVGDRMAQLKG-------GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL   72 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~-------~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~   72 (503)
                      |||++ |+|.+++.....       ..+++.++..++.||+.||+|||+++|+|+||||+||+++.++.++++|||++..
T Consensus        87 ~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~  166 (275)
T cd05046          87 LEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKD  166 (275)
T ss_pred             EEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccccc
Confidence            68998 599999975431       2689999999999999999999999999999999999999999999999998764


Q ss_pred             ccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCC
Q 010713           73 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP  151 (503)
Q Consensus        73 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~  151 (503)
                      .....  ........++..|+|||.+.+.   .++.++|+||||+++|+|++ |..||...........+.........+
T Consensus       167 ~~~~~--~~~~~~~~~~~~y~~PE~~~~~---~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  241 (275)
T cd05046         167 VYNSE--YYKLRNALIPLRWLAPEAVQED---DFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPVP  241 (275)
T ss_pred             cCccc--ccccCCceeEEeecChhhhccC---CCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCCCC
Confidence            42211  1122334567789999998743   56789999999999999999 889998777766666665444444456


Q ss_pred             CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 010713          152 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  184 (503)
Q Consensus       152 ~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~  184 (503)
                      ..++..+.+++.+||+.+|.+||++.++++.|+
T Consensus       242 ~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         242 EGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            778999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.94  E-value=1.8e-26  Score=224.80  Aligned_cols=174  Identities=24%  Similarity=0.337  Sum_probs=141.9

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.. ....+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||++......   
T Consensus        77 ~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~---  152 (256)
T cd06612          77 MEYCGAGSVSDIMKI-TNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDT---  152 (256)
T ss_pred             EecCCCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccC---
Confidence            688885 89998864 4567899999999999999999999999999999999999999999999999998765432   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-CCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-EIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~-~~~~~~~~~s~~l  158 (503)
                      ........++..|+|||++.+.   .++.++|+||||+++|+|++|..||...........+.... .....+..++..+
T Consensus       153 ~~~~~~~~~~~~y~~PE~~~~~---~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (256)
T cd06612         153 MAKRNTVIGTPFWMAPEVIQEI---GYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEF  229 (256)
T ss_pred             ccccccccCCccccCHHHHhcC---CCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHH
Confidence            1122344578899999998754   67889999999999999999999998766554433332211 1122345678899


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHH
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      .++|.+||+.||++||++.++++
T Consensus       230 ~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         230 NDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             HHHHHHHHhcChhhCcCHHHHhc
Confidence            99999999999999999999988

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.94  E-value=4.9e-27  Score=224.95  Aligned_cols=171  Identities=19%  Similarity=0.289  Sum_probs=154.6

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      +||.. |+|+..|...+..++++.....|+.|++.||.|+|.++++||||||+|+|++..+.+|++|||.+....     
T Consensus       101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p-----  175 (281)
T KOG0580|consen  101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----  175 (281)
T ss_pred             EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecC-----
Confidence            57877 799999987677889999999999999999999999999999999999999999999999999886642     


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      .....+.+||..|.|||+..+.   .++..+|+|++|++.||++.|.+||...+..+.+.++...  ...+|..++..++
T Consensus       176 ~~kR~tlcgt~dyl~pEmv~~~---~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~--~~~~p~~is~~a~  250 (281)
T KOG0580|consen  176 SNKRKTLCGTLDYLPPEMVEGR---GHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKV--DLKFPSTISGGAA  250 (281)
T ss_pred             CCCceeeecccccCCHhhcCCC---CccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHc--cccCCcccChhHH
Confidence            2344578999999999999865   6789999999999999999999999999999999999764  3456789999999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 010713          160 NVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ++|.+|+.++|.+|....|+++
T Consensus       251 dlI~~ll~~~p~~r~~l~~v~~  272 (281)
T KOG0580|consen  251 DLISRLLVKNPIERLALTEVMD  272 (281)
T ss_pred             HHHHHHhccCccccccHHHHhh
Confidence            9999999999999999999988

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.94  E-value=2.3e-26  Score=230.05  Aligned_cols=175  Identities=23%  Similarity=0.242  Sum_probs=141.8

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++++|.+++.. ....+++.+++.++.||+.||+|||+++++|+||||+||+++.++.++|+|||++.......   
T Consensus        85 ~e~~~~~L~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~---  160 (293)
T cd07843          85 MEYVEHDLKSLMET-MKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL---  160 (293)
T ss_pred             ehhcCcCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc---
Confidence            78999999999875 33469999999999999999999999999999999999999999999999999987654321   


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccC--------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE--------------  146 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~--------------  146 (503)
                      .......+++.|+|||.+.+.  ..++.++|+||||+++|+|++|..||......+...++.....              
T Consensus       161 ~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (293)
T cd07843         161 KPYTQLVVTLWYRAPELLLGA--KEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELP  238 (293)
T ss_pred             cccccccccccccCchhhcCC--ccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccc
Confidence            222345678899999998643  2467899999999999999999999988766655544432110              


Q ss_pred             ---------------CCCCCCC-CcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          147 ---------------IPPIPSG-LPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       147 ---------------~~~~~~~-~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                                     ...++.. +++.+.++|.+||+.||++|||+.|+++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         239 GAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             hhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence                           0112222 5888999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.94  E-value=1.8e-26  Score=229.34  Aligned_cols=178  Identities=21%  Similarity=0.316  Sum_probs=141.9

Q ss_pred             CcCCCC-CHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCC
Q 010713            1 MKFYEG-SVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~--~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~   77 (503)
                      |||++| +|.+++...  ....+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||++...... 
T Consensus        99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~-  177 (286)
T cd06638          99 LELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTST-  177 (286)
T ss_pred             EeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCceeecccC-
Confidence            789985 899887642  3457899999999999999999999999999999999999999999999999998765331 


Q ss_pred             CCCCCCCCccCCCCCCCccccCCC--CCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-CCCCCCCCC
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPE--VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-EIPPIPSGL  154 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~--~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~-~~~~~~~~~  154 (503)
                        ........|++.|+|||.+...  ....++.++|+|||||++|+|++|+.||................ .....+..+
T Consensus       178 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (286)
T cd06638         178 --RLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELW  255 (286)
T ss_pred             --CCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCCcccCCCCc
Confidence              1122345688999999998532  12357889999999999999999999998766544443332221 112234557


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +..+.++|.+||+.||++|||+.|+++
T Consensus       256 ~~~~~~li~~~l~~~p~~Rps~~ell~  282 (286)
T cd06638         256 SNEFNDFIRKCLTKDYEKRPTVSDLLQ  282 (286)
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHhh
Confidence            889999999999999999999999998

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.94  E-value=6.4e-27  Score=245.02  Aligned_cols=184  Identities=22%  Similarity=0.273  Sum_probs=141.6

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||-+-+|...|.+ +...++.-.+..|..||+.|+.++|++||||.||||.|+|+- .|.+||+|||+|..+.... ..
T Consensus       439 mE~Gd~DL~kiL~k-~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DT-Ts  515 (677)
T KOG0596|consen  439 MECGDIDLNKILKK-KKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDT-TS  515 (677)
T ss_pred             eecccccHHHHHHh-ccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCccc-cc
Confidence            78888899999975 344455458999999999999999999999999999999996 6799999999998765422 23


Q ss_pred             CCCCCccCCCCCCCccccCCCCCC--------CCCCccchHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhccCCCCCC
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRG--------PISFETDSWGFACSIIEMLTGVQPRCGRSVD-EIYDAVVRRQEIPPIP  151 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~--------~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-e~~~~i~~~~~~~~~~  151 (503)
                      ......+||+.||+||.+......        ..++++||||||||||+|+.|+.||...... .-+..+..-.-..++|
T Consensus       516 I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp  595 (677)
T KOG0596|consen  516 IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFP  595 (677)
T ss_pred             eeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCcccccc
Confidence            334577999999999998643211        3678999999999999999999999764322 2222332222222344


Q ss_pred             CCCcHH-HHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          152 SGLPPA-VENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       152 ~~~s~~-l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      ..-+.. +.++++.||..||.+||++.++|+      ++|...
T Consensus       596 ~~~~~~~li~~mK~CL~rdPkkR~si~eLLq------hpFl~~  632 (677)
T KOG0596|consen  596 DIPENDELIDVMKCCLARDPKKRWSIPELLQ------HPFLQI  632 (677)
T ss_pred             CCCCchHHHHHHHHHHhcCcccCCCcHHHhc------Cccccc
Confidence            433333 999999999999999999999999      777553

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.94  E-value=3.6e-26  Score=223.73  Aligned_cols=179  Identities=28%  Similarity=0.475  Sum_probs=141.9

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ ++|.+++.  ....+++..+..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||++.........
T Consensus        78 ~e~~~~~~L~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~  155 (264)
T cd06626          78 MEYCSGGTLEELLE--HGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT  155 (264)
T ss_pred             EecCCCCcHHHHHh--hcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCc
Confidence            68888 58999886  3456899999999999999999999999999999999999999999999999998776442221


Q ss_pred             CCC-CCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCC--CcH
Q 010713           80 SSD-LPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG--LPP  156 (503)
Q Consensus        80 ~~~-~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~--~s~  156 (503)
                      ... .....++..|+|||++.+.....++.++|+||||+++|+|++|..||..................+.++..  +++
T Consensus       156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (264)
T cd06626         156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSP  235 (264)
T ss_pred             ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCH
Confidence            111 22356788999999997543234788999999999999999999999765433322222222334444544  489


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          157 AVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      .+.++|.+||+.+|.+||++.+++.
T Consensus       236 ~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         236 EGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             HHHHHHHHHccCCcccCCCHHHHhc
Confidence            9999999999999999999999987

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.94  E-value=2.8e-26  Score=227.72  Aligned_cols=176  Identities=22%  Similarity=0.228  Sum_probs=140.7

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++++|.+++.......+++..++.++.|+++||+|||+++++|+||+|+||+++.++.++|+|||++......   .
T Consensus        77 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~---~  153 (283)
T cd07835          77 FEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVP---V  153 (283)
T ss_pred             EeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCC---c
Confidence            6899999999997544457999999999999999999999999999999999999999999999999998654321   1


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC-------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-------------  147 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~-------------  147 (503)
                      .......++..|+|||++.+.  ..++.++|+||||+++|+|++|..||...+.......+......             
T Consensus       154 ~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (283)
T cd07835         154 RTYTHEVVTLWYRAPEILLGS--RQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLP  231 (283)
T ss_pred             cccCccccccCCCCCceeecC--cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhch
Confidence            122234568899999988642  24688999999999999999999999876654443333221000             


Q ss_pred             --------------CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          148 --------------PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       148 --------------~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                                    ......++..+.++|.+||+.||++||++.++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         232 DYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             hhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence                          0123467789999999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.94  E-value=1.7e-26  Score=230.55  Aligned_cols=195  Identities=19%  Similarity=0.333  Sum_probs=154.2

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.  ....+++..+..++.|++.||+|||++|++||||+|+||+++.++.++|+|||++.......  
T Consensus        84 ~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~--  159 (290)
T cd05613          84 LDYINGGELFTHLS--QRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDE--  159 (290)
T ss_pred             EecCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceeccccc--
Confidence            689985 9999986  34678999999999999999999999999999999999999999999999999987653321  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHhccCCCCCCCCCc
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV----DEIYDAVVRRQEIPPIPSGLP  155 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~----~e~~~~i~~~~~~~~~~~~~s  155 (503)
                      ........++..|+|||.+... ...++.++|+||||+++|+|++|..||.....    .+....+..  ..++++..++
T Consensus       160 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  236 (290)
T cd05613         160 VERAYSFCGTIEYMAPDIVRGG-DGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILK--SEPPYPQEMS  236 (290)
T ss_pred             ccccccccCCcccCChhhccCC-CCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhc--cCCCCCccCC
Confidence            1122345688999999998643 23467889999999999999999999964322    223222222  2345677789


Q ss_pred             HHHHHHHHHhhhcCCCCCC-----CHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCC
Q 010713          156 PAVENVLLGCFEYDLRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKS  208 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RP-----S~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~  208 (503)
                      +.+.+++.+||+.||++||     ++.+++.      ++++....|.....+..+.|.
T Consensus       237 ~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~  288 (290)
T cd05613         237 ALAKDIIQRLLMKDPKKRLGCGPSDADEIKK------HPFFQKINWDDLAAKKVPAPF  288 (290)
T ss_pred             HHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc------CcccccCCHHHHhhccCCCCC
Confidence            9999999999999999997     7888877      899988888776555555444

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.94  E-value=2.8e-26  Score=234.84  Aligned_cols=183  Identities=17%  Similarity=0.311  Sum_probs=149.8

Q ss_pred             CcCCC-CCHHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEE
Q 010713            1 MKFYE-GSVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG   65 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~--------------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~   65 (503)
                      |||++ |+|.+++....              ...++..+++.++.|++.||+|||++|++||||||+||+++.++.++|+
T Consensus        97 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~~~kL~  176 (334)
T cd05100          97 VEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIA  176 (334)
T ss_pred             EecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEEC
Confidence            68887 59999997532              2357889999999999999999999999999999999999999999999


Q ss_pred             ecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc
Q 010713           66 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR  144 (503)
Q Consensus        66 DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~  144 (503)
                      |||+++........ .......++..|+|||++.+.   .++.++|+||||+++|+|++ |..||.+.+..+....+.. 
T Consensus       177 Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~-  251 (334)
T cd05100         177 DFGLARDVHNIDYY-KKTTNGRLPVKWMAPEALFDR---VYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKE-  251 (334)
T ss_pred             Ccccceeccccccc-ccccCCCcCceEcCHHHhccC---CcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-
Confidence            99998765332111 111223345679999999743   57889999999999999998 8999998887777666544 


Q ss_pred             cCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       145 ~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      ......+..++..+.+++.+||+.+|.+||++.++++.|+.+..
T Consensus       252 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~  295 (334)
T cd05100         252 GHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT  295 (334)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence            33445667789999999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.94  E-value=1.9e-26  Score=228.09  Aligned_cols=182  Identities=19%  Similarity=0.318  Sum_probs=143.2

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.. ....+++.++..++.||+.||+|||++|++|+||||+||+++.++.++|+|||++.........
T Consensus        87 ~e~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~  165 (284)
T cd05038          87 MEYLPSGSLRDYLQR-HRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDY  165 (284)
T ss_pred             EecCCCCCHHHHHHh-CccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcc
Confidence            68997 599999964 3346999999999999999999999999999999999999999999999999998776422111


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHH--------------HHHHHHhcc
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE--------------IYDAVVRRQ  145 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e--------------~~~~i~~~~  145 (503)
                      ........++..|+|||.+.+.   .++.++|+||||+++|+|++|..|+.......              .........
T Consensus       166 ~~~~~~~~~~~~~~~Pe~~~~~---~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (284)
T cd05038         166 YYVKEPGESPIFWYAPECLRTS---KFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEG  242 (284)
T ss_pred             eeccCCCCCcccccCcHHHccC---CCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcC
Confidence            1111123445679999998743   67889999999999999999999986532211              112222233


Q ss_pred             CCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhh
Q 010713          146 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSS  186 (503)
Q Consensus       146 ~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i  186 (503)
                      ...+.+..++.++.+++.+||+.+|++||++.|++++|+.+
T Consensus       243 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         243 ERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             CcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            33444567789999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.94  E-value=2.4e-26  Score=223.91  Aligned_cols=173  Identities=23%  Similarity=0.429  Sum_probs=145.8

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.  ....+++..+..++.||+.||+|||+.|++|+||+|+||+++.++.+||+|||++.......  
T Consensus        81 ~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~--  156 (258)
T cd06632          81 LELVPGGSLAKLLK--KYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS--  156 (258)
T ss_pred             EEecCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc--
Confidence            689985 8999986  34568999999999999999999999999999999999999999999999999887653321  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                        ......++..|+|||.+....  .++.++|+||||+++|+|++|..||......+....+......+.++..+++.+.
T Consensus       157 --~~~~~~~~~~y~~pe~~~~~~--~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (258)
T cd06632         157 --FAKSFKGSPYWMAPEVIAQQG--GYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAK  232 (258)
T ss_pred             --cccccCCCcceeCHHHhcCCC--CCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHH
Confidence              233556889999999987431  3788999999999999999999999877655555554443455567778899999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 010713          160 NVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +++.+||+.+|.+||++.+++.
T Consensus       233 ~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         233 DFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             HHHHHHhhcCcccCcCHHHHhc
Confidence            9999999999999999999987

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.94  E-value=4.2e-26  Score=230.15  Aligned_cols=192  Identities=21%  Similarity=0.312  Sum_probs=151.1

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++..  .+.+++..+..++.|++.||+|||+++++|+||||+||+++.++.++|+|||+++........
T Consensus        80 ~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~  157 (305)
T cd05609          80 MEYVEGGDCATLLKN--IGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTT  157 (305)
T ss_pred             EecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccc
Confidence            789985 89999863  467999999999999999999999999999999999999999999999999988642110000


Q ss_pred             ------------CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC
Q 010713           80 ------------SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI  147 (503)
Q Consensus        80 ------------~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~  147 (503)
                                  ........++..|+|||.+.+.   .++.++|+|||||++|+|++|..||.+....+...........
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~  234 (305)
T cd05609         158 NLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQ---GYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIE  234 (305)
T ss_pred             cccccccccchhhccccCCccCccccCchhccCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC
Confidence                        0011124578899999998743   5789999999999999999999999988877777766553322


Q ss_pred             -CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCCCC
Q 010713          148 -PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGHG  200 (503)
Q Consensus       148 -~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~~~  200 (503)
                       +.....++.++.++|.+||+.||++||+..++.+.|+   ++++...+|....
T Consensus       235 ~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~---~~~~~~~~~~~~~  285 (305)
T cd05609         235 WPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQ---HRFFLGLDWNGLL  285 (305)
T ss_pred             CCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHh---CccccCCCHHHHh
Confidence             2223468899999999999999999998654444333   7888777776643

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.94  E-value=2.3e-27  Score=231.38  Aligned_cols=174  Identities=26%  Similarity=0.433  Sum_probs=139.6

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||+++ +|.+++.  ....+++.++..++.||++||++||+++|+|+||||+||+++.++.++|+|||.+.....   .
T Consensus        77 ~~~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~---~  151 (260)
T PF00069_consen   77 MEYCPGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSE---N  151 (260)
T ss_dssp             EEEETTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTS---T
T ss_pred             cccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---c
Confidence            689997 9999997  467789999999999999999999999999999999999999999999999999875411   1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHhccCCC--CCCCCC
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE---IYDAVVRRQEIP--PIPSGL  154 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e---~~~~i~~~~~~~--~~~~~~  154 (503)
                      ........++..|+|||++..  ...++.++|+||||+++|+|++|..||......+   ............  ......
T Consensus       152 ~~~~~~~~~~~~y~aPE~~~~--~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (260)
T PF00069_consen  152 NENFNPFVGTPEYMAPEVLQQ--GKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREK  229 (260)
T ss_dssp             TSEBSSSSSSGGGSCHHHHTT--TSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTS
T ss_pred             ccccccccccccccccccccc--cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchh
Confidence            233445678999999999871  2257899999999999999999999999873332   222222211111  111223


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ++.+.++|.+||+.||++||++.++++
T Consensus       230 ~~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  230 SEELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             HHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             HHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            489999999999999999999999998

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.94  E-value=3.1e-26  Score=227.15  Aligned_cols=175  Identities=19%  Similarity=0.304  Sum_probs=137.5

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||+++++.+.+.. ....+++.+++.++.||+.||+|||++|++|+||||+||+++.++.++|+|||++.......   
T Consensus        79 ~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~---  154 (286)
T cd07847          79 FEYCDHTVLNELEK-NPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPG---  154 (286)
T ss_pred             EeccCccHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCc---
Confidence            78999865555543 44579999999999999999999999999999999999999999999999999987654321   


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccC--------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE--------------  146 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~--------------  146 (503)
                      .......++..|+|||.+.+.  ..++.++|+||||+++|+|++|..||.+....+....+.....              
T Consensus       155 ~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (286)
T cd07847         155 DDYTDYVATRWYRAPELLVGD--TQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQ  232 (286)
T ss_pred             ccccCcccccccCCHHHHhCC--CCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccc
Confidence            122344578899999998642  2578899999999999999999999987765544333221100              


Q ss_pred             ------CCC---------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          147 ------IPP---------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       147 ------~~~---------~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                            .+.         ....++..+.+||.+||+.+|++||++.+++.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         233 FFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             ccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence                  000         01346788999999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.94  E-value=2.5e-26  Score=227.64  Aligned_cols=174  Identities=17%  Similarity=0.238  Sum_probs=142.6

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++++|.+++.......+++.+++.++.|++.||+|||+++++|+||+|+||+++.++.++|+|||++......    
T Consensus        85 ~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~----  160 (287)
T cd07838          85 FEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFE----  160 (287)
T ss_pred             ehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccCC----
Confidence            6899999999987644557999999999999999999999999999999999999999999999999998765332    


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------  148 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~------------  148 (503)
                      .......++..|+|||.+.+.   .++.++|+|||||++|+|++|.+||.+....+....+......+            
T Consensus       161 ~~~~~~~~~~~~~~PE~~~~~---~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (287)
T cd07838         161 MALTSVVVTLWYRAPEVLLQS---SYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLP  237 (287)
T ss_pred             cccccccccccccChHHhccC---CCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccc
Confidence            122234578899999999754   57889999999999999999999999887776665554321100            


Q ss_pred             -------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          149 -------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       149 -------------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                                   .....++..+.++|.+||+.||.+||++.+++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         238 RSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             hhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence                         001235678899999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.94  E-value=3.2e-26  Score=228.72  Aligned_cols=178  Identities=22%  Similarity=0.293  Sum_probs=142.3

Q ss_pred             CcCCCC-CHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCC
Q 010713            1 MKFYEG-SVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~--~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~   77 (503)
                      |||++| +|.+++...  ....+++..++.++.|++.||+|||+++++|+||||+||+++.++.++|+|||++.......
T Consensus       103 ~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~  182 (291)
T cd06639         103 LELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR  182 (291)
T ss_pred             EEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccchhccccc
Confidence            688875 999988643  35678999999999999999999999999999999999999999999999999987653311


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCC--CCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccC-CCCCCCCC
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IPPIPSGL  154 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~--~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~-~~~~~~~~  154 (503)
                         .......++..|+|||.+....  ...++.++|+|||||++|+|++|+.||......+....+..... ....+...
T Consensus       183 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (291)
T cd06639         183 ---LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKW  259 (291)
T ss_pred             ---ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCCccccc
Confidence               1123346788999999986431  12367899999999999999999999987766555444433221 11234567


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +..+.++|.+||+.+|++||++.++++
T Consensus       260 ~~~l~~li~~~l~~~p~~Rps~~~il~  286 (291)
T cd06639         260 CRSFNHFISQCLIKDFEARPSVTHLLE  286 (291)
T ss_pred             CHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            789999999999999999999999998

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.94  E-value=1.9e-26  Score=230.06  Aligned_cols=199  Identities=21%  Similarity=0.334  Sum_probs=156.4

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+.+.  ....+++.++..++.|++.||+|||+.+++|+||+|+||+++.++.++|+|||++.......  
T Consensus        84 ~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--  159 (288)
T cd05583          84 LDYVNGGELFTHLY--QREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEE--  159 (288)
T ss_pred             EecCCCCcHHHHHh--hcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECcccccccccc--
Confidence            689985 8998886  34678999999999999999999999999999999999999999999999999987653321  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHHhccCCCCCCCCCc
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS----VDEIYDAVVRRQEIPPIPSGLP  155 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~----~~e~~~~i~~~~~~~~~~~~~s  155 (503)
                      ........++..|+|||.+.+. ....+.++|+||||+++|+|++|..||....    ..+....+..  ..++.+..++
T Consensus       160 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  236 (288)
T cd05583         160 EERAYSFCGTIEYMAPEVIRGG-SGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILK--SKPPFPKTMS  236 (288)
T ss_pred             ccccccccCCccccCHHHhcCC-CCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHc--cCCCCCcccC
Confidence            1112234678899999998653 1236789999999999999999999996432    2222222222  3345667789


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCC
Q 010713          156 PAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSS  209 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~  209 (503)
                      ..+.++|.+||+.||++|||+.++.+.|+   ++++...+|..+.+...+++..
T Consensus       237 ~~l~~li~~~l~~~p~~R~t~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~  287 (288)
T cd05583         237 AEARDFIQKLLEKDPKKRLGANGADEIKN---HPFFQGIDWDDLAAKRIPAPFK  287 (288)
T ss_pred             HHHHHHHHHHhcCCHhhccCcchHHHHhc---CcccccCCHHHHhhhccCCCCC
Confidence            99999999999999999999877766544   7899999998776666665543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.94  E-value=1.9e-26  Score=229.77  Aligned_cols=183  Identities=22%  Similarity=0.325  Sum_probs=141.3

Q ss_pred             CcCCCCCHHHHHHh---hcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecccCCCcEEEccCCcEEEEecCCcccccCC
Q 010713            1 MKFYEGSVGDRMAQ---LKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~GSL~d~L~~---~~~~~Ls~~~vl~i~~QIl~aL~yLHs~-gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~   76 (503)
                      |||++++|.++...   .....+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++......
T Consensus        82 ~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~  161 (288)
T cd06616          82 MELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS  161 (288)
T ss_pred             EecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence            68888877665532   2356799999999999999999999975 9999999999999999999999999998765331


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHhccCCCCC----C
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV-DEIYDAVVRRQEIPPI----P  151 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-~e~~~~i~~~~~~~~~----~  151 (503)
                          .......++..|+|||++.+.....++.++|+|||||++|+|++|..||..... .+....+.. ...+..    +
T Consensus       162 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~  236 (288)
T cd06616         162 ----IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVK-GDPPILSNSEE  236 (288)
T ss_pred             ----CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcC-CCCCcCCCcCC
Confidence                122334678899999998753223578899999999999999999999976542 122222211 111222    2


Q ss_pred             CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCC
Q 010713          152 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDG  194 (503)
Q Consensus       152 ~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~  194 (503)
                      ..++.++.+||.+||+.||++|||+.++++      ++++...
T Consensus       237 ~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~------~~~~~~~  273 (288)
T cd06616         237 REFSPSFVNFINLCLIKDESKRPKYKELLE------HPFIKDY  273 (288)
T ss_pred             CccCHHHHHHHHHHccCChhhCcCHHHHhc------Chhhhch
Confidence            357899999999999999999999999998      7776543

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.94  E-value=3.4e-26  Score=228.23  Aligned_cols=180  Identities=18%  Similarity=0.305  Sum_probs=145.7

Q ss_pred             CcCCC-CCHHHHHHhhc--------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC
Q 010713            1 MKFYE-GSVGDRMAQLK--------------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA   59 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~--------------------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~   59 (503)
                      |||++ |+|.+++....                    ...+++.+++.++.|++.||+|||+++++||||||+||+++.+
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~  166 (288)
T cd05050          87 FEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGEN  166 (288)
T ss_pred             EecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCC
Confidence            68888 59999997432                    1247888999999999999999999999999999999999999


Q ss_pred             CcEEEEecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 010713           60 DRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIY  138 (503)
Q Consensus        60 ~~vKL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~  138 (503)
                      +.++|+|||++........ .........+..|+|||.+.+.   .++.++|+|||||++|+|++ |..||.+....+..
T Consensus       167 ~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~  242 (288)
T cd05050         167 MVVKIADFGLSRNIYSADY-YKASENDAIPIRWMPPESIFYN---RYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVI  242 (288)
T ss_pred             CceEECccccceecccCcc-ccccCCCccChhhcCHHHHhcC---CCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            9999999999875432111 1111223345679999998743   68889999999999999998 88999888777776


Q ss_pred             HHHHhccCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHh
Q 010713          139 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  185 (503)
Q Consensus       139 ~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~  185 (503)
                      ..+... .....+..++.++.+||.+||+.+|++||++.|+++.|++
T Consensus       243 ~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         243 YYVRDG-NVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             HHHhcC-CCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence            665443 3344567789999999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.94  E-value=3.3e-26  Score=229.59  Aligned_cols=180  Identities=20%  Similarity=0.292  Sum_probs=142.0

Q ss_pred             CcCCCC-CHHHHHHhhc----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCC
Q 010713            1 MKFYEG-SVGDRMAQLK----------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI   69 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~----------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGl   69 (503)
                      |||+.| +|.+++....          ...+++.+++.++.|++.||+|||++|++|+||||+||+++.++.+||+|||+
T Consensus        96 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~  175 (295)
T cd05097          96 TEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGM  175 (295)
T ss_pred             EecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCCCcEEeccccc
Confidence            789985 9999886421          12478899999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHh----
Q 010713           70 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT--GVQPRCGRSVDEIYDAVVR----  143 (503)
Q Consensus        70 a~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt--G~~Pf~~~~~~e~~~~i~~----  143 (503)
                      +........ ........++..|+|||.+.+.   .++.++|+||||+++|+|++  +..||...+..+....+..    
T Consensus       176 ~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~  251 (295)
T cd05097         176 SRNLYSGDY-YRIQGRAVLPIRWMAWESILLG---KFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRN  251 (295)
T ss_pred             ccccccCcc-eeccCcCcCceeecChhhhccC---CcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhh
Confidence            875432111 1112233456789999998743   57899999999999999988  6788887766665544322    


Q ss_pred             --ccCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 010713          144 --RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  184 (503)
Q Consensus       144 --~~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~  184 (503)
                        .......+..+++.+.+|+.+||+.||++||++.++++.|+
T Consensus       252 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         252 QGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             ccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence              11122345567899999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.94  E-value=5.1e-27  Score=225.81  Aligned_cols=185  Identities=24%  Similarity=0.340  Sum_probs=144.2

Q ss_pred             cCC-CCCHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecccCCCcEEEccCCcEEEEecCCcccccCC
Q 010713            2 KFY-EGSVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSKG--ILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         2 Ey~-~GSL~d~L~~~~--~~~Ls~~~vl~i~~QIl~aL~yLHs~g--IvHrDLKP~NILld~~~~vKL~DFGla~~~~~~   76 (503)
                      .|+ .|||.|.+...+  +..+++.+++.|+.+|++||++||+..  ++||||||.|||+.+++.++|.|||.+....-.
T Consensus       103 Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~  182 (302)
T KOG2345|consen  103 PYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQ  182 (302)
T ss_pred             ehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccceE
Confidence            344 489999998763  557999999999999999999999999  999999999999999999999999988654211


Q ss_pred             CCCCCC------CCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHhccCCC
Q 010713           77 PLPSSD------LPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD--EIYDAVVRRQEIP  148 (503)
Q Consensus        77 ~~~~~~------~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~--e~~~~i~~~~~~~  148 (503)
                      -.....      -.....|..|.|||.+........+.++|||||||+||+|+.|..||......  .+.-.+...+...
T Consensus       183 i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~  262 (302)
T KOG2345|consen  183 IEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISI  262 (302)
T ss_pred             eechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeecccccc
Confidence            100100      11235688999999998777777899999999999999999999999532110  1111122222223


Q ss_pred             CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhh
Q 010713          149 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSS  186 (503)
Q Consensus       149 ~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i  186 (503)
                      +-...+++.+.++|+.||+.||.+||++.+++..++.+
T Consensus       263 P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L  300 (302)
T KOG2345|consen  263 PNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL  300 (302)
T ss_pred             CCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence            33355999999999999999999999999999988765

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.94  E-value=4.8e-26  Score=231.43  Aligned_cols=173  Identities=20%  Similarity=0.292  Sum_probs=145.8

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||+.|+|.+++.. ....+++.++..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++.....     
T Consensus       104 ~e~~~g~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~-----  177 (317)
T cd06635         104 MEYCLGSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP-----  177 (317)
T ss_pred             EeCCCCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC-----
Confidence            79999999888864 356699999999999999999999999999999999999999999999999998765321     


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHHH
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVEN  160 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~~  160 (503)
                        .....+++.|+|||.+.....+.++.++|+|||||++|+|++|..||...........+............+++.+.+
T Consensus       178 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  255 (317)
T cd06635         178 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRN  255 (317)
T ss_pred             --cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHH
Confidence              224567889999999853223457889999999999999999999998877666666665544444445678899999


Q ss_pred             HHHHhhhcCCCCCCCHHHHHH
Q 010713          161 VLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       161 LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +|.+||+.+|.+||++.++++
T Consensus       256 li~~~l~~~p~~Rpt~~~il~  276 (317)
T cd06635         256 FVDSCLQKIPQDRPTSEELLK  276 (317)
T ss_pred             HHHHHccCCcccCcCHHHHHh
Confidence            999999999999999999998

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.94  E-value=2.6e-26  Score=231.34  Aligned_cols=177  Identities=21%  Similarity=0.308  Sum_probs=144.9

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.   ...+++.++..++.|++.||+|||++|++|+||||+||+++.++.++|+|||++.......  
T Consensus        95 ~e~~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~--  169 (296)
T cd06655          95 MEYLAGGSLTDVVT---ETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ--  169 (296)
T ss_pred             EEecCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhccccc--
Confidence            688885 8888774   3468999999999999999999999999999999999999999999999999887653311  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-CCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-EIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~-~~~~~~~~~s~~l  158 (503)
                       .......++..|+|||.+.+.   .++.++|+|||||++|+|++|..||...+.......+.... .....+..+++.+
T Consensus       170 -~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (296)
T cd06655         170 -SKRSTMVGTPYWMAPEVVTRK---AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIF  245 (296)
T ss_pred             -ccCCCcCCCccccCcchhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHH
Confidence             122345688899999998743   57889999999999999999999998877655444443222 2223456789999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      .++|.+||..||++||++.+++.      ++|+.
T Consensus       246 ~~li~~~l~~dp~~Rpt~~~il~------~~~~~  273 (296)
T cd06655         246 RDFLNRCLEMDVEKRGSAKELLQ------HPFLK  273 (296)
T ss_pred             HHHHHHHhhcChhhCCCHHHHhh------ChHhh
Confidence            99999999999999999999998      66664

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.94  E-value=3.3e-26  Score=234.44  Aligned_cols=182  Identities=19%  Similarity=0.244  Sum_probs=142.2

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++++|.+++   ....+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||++..........
T Consensus        87 ~e~~~~~l~~~~---~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~  163 (336)
T cd07849          87 QELMETDLYKLI---KTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHT  163 (336)
T ss_pred             ehhcccCHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecccccccc
Confidence            688999888887   44679999999999999999999999999999999999999999999999999987654322222


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccC--------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE--------------  146 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~--------------  146 (503)
                      .......+++.|+|||.+.+.  ..++.++|+||||+++|+|++|+.||.+.+.......+.....              
T Consensus       164 ~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (336)
T cd07849         164 GFLTEYVATRWYRAPEIMLNS--KGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLR  241 (336)
T ss_pred             CCcCCcCcCCCccChHHhhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchh
Confidence            222345788999999987532  2578899999999999999999999977654333222211000              


Q ss_pred             ----------CCC-----CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          147 ----------IPP-----IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       147 ----------~~~-----~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                                ...     .....++++.++|.+||+.||++||++.++++      ++|+..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~------hp~~~~  297 (336)
T cd07849         242 ARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALA------HPYLEQ  297 (336)
T ss_pred             hhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhc------Cccccc
Confidence                      000     11345788999999999999999999999999      776653

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.94  E-value=3.9e-26  Score=229.23  Aligned_cols=180  Identities=21%  Similarity=0.318  Sum_probs=141.8

Q ss_pred             CcCCC-CCHHHHHHhhcC---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCc
Q 010713            1 MKFYE-GSVGDRMAQLKG---------GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP   70 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~---------~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla   70 (503)
                      |||++ |+|.+++.....         ..+++.++..++.|++.||+|||++|++|+||||+||+++.++.++|+|||++
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~  177 (296)
T cd05095          98 TEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMS  177 (296)
T ss_pred             EEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCCCCEEeccCccc
Confidence            68887 599999875321         24778899999999999999999999999999999999999999999999998


Q ss_pred             ccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHh-----
Q 010713           71 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT--GVQPRCGRSVDEIYDAVVR-----  143 (503)
Q Consensus        71 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt--G~~Pf~~~~~~e~~~~i~~-----  143 (503)
                      ........ ........++..|++||...+   +.++.++|+|||||++|||++  |..||...+..+.......     
T Consensus       178 ~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~---~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~  253 (296)
T cd05095         178 RNLYSGDY-YRIQGRAVLPIRWMSWESILL---GKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQ  253 (296)
T ss_pred             ccccCCcc-eeccCcCcCccccCCHHHHhc---CCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhc
Confidence            76532111 111122344678999998764   368899999999999999998  7889987666555443321     


Q ss_pred             -ccCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 010713          144 -RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  184 (503)
Q Consensus       144 -~~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~  184 (503)
                       .....+.+..+++.+.+|+.+||+.||.+||++.++++.|+
T Consensus       254 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         254 GRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             cccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence             11222345668899999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.94  E-value=1.7e-26  Score=246.94  Aligned_cols=178  Identities=22%  Similarity=0.323  Sum_probs=149.9

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC--CcEEEEecCCcccccCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA--DRAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~--~~vKL~DFGla~~~~~~~~   78 (503)
                      +|.++-||+++++.++-..|+...++.++.||+.||.+||+.+|||+||||+|||+...  ..+||+|||.+.....   
T Consensus       267 fELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q---  343 (586)
T KOG0667|consen  267 FELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQ---  343 (586)
T ss_pred             ehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCC---
Confidence            47778899999998888889999999999999999999999999999999999999654  3799999999987532   


Q ss_pred             CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC---------
Q 010713           79 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP---------  149 (503)
Q Consensus        79 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~---------  149 (503)
                         ...+.+.+..|.|||++.+.   +|+.+.||||||||++||++|.+.|.+.+..+++..|++-...|+         
T Consensus       344 ---~vytYiQSRfYRAPEVILGl---pY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~  417 (586)
T KOG0667|consen  344 ---RVYTYIQSRFYRAPEVILGL---PYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKK  417 (586)
T ss_pred             ---cceeeeeccccccchhhccC---CCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccc
Confidence               33377888999999999966   899999999999999999999999999988887777763211110         


Q ss_pred             -----------------------------------------CC-----------CCCcHHHHHHHHHhhhcCCCCCCCHH
Q 010713          150 -----------------------------------------IP-----------SGLPPAVENVLLGCFEYDLRSRPLMT  177 (503)
Q Consensus       150 -----------------------------------------~~-----------~~~s~~l~~LI~~cL~~DP~~RPS~~  177 (503)
                                                               .|           ..-...+.++|.+||+.||.+|+|..
T Consensus       418 ~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~  497 (586)
T KOG0667|consen  418 AHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPA  497 (586)
T ss_pred             cceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHH
Confidence                                                     11           01235578999999999999999999


Q ss_pred             HHHHHHHhhccCcCCC
Q 010713          178 DILRVFKSSQNSVHSD  193 (503)
Q Consensus       178 elL~~L~~i~~~~~~~  193 (503)
                      ++++      |+|+..
T Consensus       498 qal~------Hpfl~~  507 (586)
T KOG0667|consen  498 QALN------HPFLTG  507 (586)
T ss_pred             HHhc------Cccccc
Confidence            9999      888764

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=1.1e-26  Score=241.10  Aligned_cols=171  Identities=18%  Similarity=0.281  Sum_probs=150.9

Q ss_pred             cCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEcc-CCcEEEEecCCcccccCCCCC
Q 010713            2 KFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE-ADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         2 Ey~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~-~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |+-+ |+|+|++.. ....++++.+.+|+.||+.|+.|+|+..++||||||+|+.+.+ -|-+||.|||++..+.    +
T Consensus        97 ELGD~GDl~DyImK-He~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~----P  171 (864)
T KOG4717|consen   97 ELGDGGDLFDYIMK-HEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ----P  171 (864)
T ss_pred             EecCCchHHHHHHh-hhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCC----C
Confidence            4445 599999986 3556999999999999999999999999999999999987754 5899999999987664    3


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      .....+.+|+..|.|||++.+..+  ..+++||||||+|||.|++|++||...+..+.+..|+.+..  .+|..++.+++
T Consensus       172 G~kL~TsCGSLAYSAPEILLGDsY--DAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKY--tvPshvS~eCr  247 (864)
T KOG4717|consen  172 GKKLTTSCGSLAYSAPEILLGDSY--DAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKY--TVPSHVSKECR  247 (864)
T ss_pred             cchhhcccchhhccCchhhhcCcc--CCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccc--cCchhhhHHHH
Confidence            567788999999999999997632  24789999999999999999999999999999988887654  57889999999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 010713          160 NVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +||..||..||.+|.+.++|..
T Consensus       248 dLI~sMLvRdPkkRAslEeI~s  269 (864)
T KOG4717|consen  248 DLIQSMLVRDPKKRASLEEIVS  269 (864)
T ss_pred             HHHHHHHhcCchhhccHHHHhc
Confidence            9999999999999999999987

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.94  E-value=2.9e-26  Score=224.43  Aligned_cols=178  Identities=23%  Similarity=0.362  Sum_probs=144.6

Q ss_pred             CcCCCC-CHHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCC
Q 010713            1 MKFYEG-SVGDRMAQLK-GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~-~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~   78 (503)
                      |||++| +|.+++.... ...+++..+..++.|++.||+|||++|++|+||+|+||++++++.++|+|||++........
T Consensus        78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~  157 (267)
T cd06610          78 MPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD  157 (267)
T ss_pred             EeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence            688985 8999987543 36799999999999999999999999999999999999999999999999999876644322


Q ss_pred             CC-CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCC-----C
Q 010713           79 PS-SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP-----S  152 (503)
Q Consensus        79 ~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~-----~  152 (503)
                      .. .......++..|+|||++...  ..++.++|+||||+++|+|++|..||...+..+.+....... .+..+     .
T Consensus       158 ~~~~~~~~~~~~~~y~~Pe~~~~~--~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  234 (267)
T cd06610         158 RTRKVRKTFVGTPCWMAPEVMEQV--HGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQND-PPSLETGADYK  234 (267)
T ss_pred             ccccccccccCChhhcChHHHccc--cCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCC-CCCcCCccccc
Confidence            11 122344688999999998743  257889999999999999999999998877666555554432 22122     3


Q ss_pred             CCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          153 GLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       153 ~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      .+++.+.+++.+||..||++||++.++++
T Consensus       235 ~~~~~~~~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         235 KYSKSFRKMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             cccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            67899999999999999999999999998

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.94  E-value=3.5e-26  Score=223.47  Aligned_cols=176  Identities=19%  Similarity=0.331  Sum_probs=144.1

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.. ..+.++++.+..++.|++.||+|||+++++|+||||+||+++.++.++|+|||++.......  
T Consensus        78 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--  154 (256)
T cd05112          78 FEFMEHGCLSDYLRA-QRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ--  154 (256)
T ss_pred             EEcCCCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCc--
Confidence            688885 89888864 34578999999999999999999999999999999999999999999999999887543211  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........++..|+|||.+.+.   .++.++|+||||+++|+|++ |..||......+....+... .....+...+..+
T Consensus       155 ~~~~~~~~~~~~~~aPe~~~~~---~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  230 (256)
T cd05112         155 YTSSTGTKFPVKWSSPEVFSFS---KYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAG-FRLYKPRLASQSV  230 (256)
T ss_pred             ccccCCCccchhhcCHhHhccC---CcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCC-CCCCCCCCCCHHH
Confidence            1111223345689999998743   57889999999999999998 99999887777766665432 2333456678999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHH
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVF  183 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L  183 (503)
                      .+|+.+||+.+|++||++.++++.|
T Consensus       231 ~~l~~~~l~~~p~~Rp~~~~~l~~l  255 (256)
T cd05112         231 YELMQHCWKERPEDRPSFSLLLHQL  255 (256)
T ss_pred             HHHHHHHcccChhhCCCHHHHHHhh
Confidence            9999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.94  E-value=3.3e-26  Score=225.50  Aligned_cols=177  Identities=23%  Similarity=0.402  Sum_probs=147.7

Q ss_pred             CcCCCC-CHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecccCCCcEEEccCCcEEEEecCCcccccCC
Q 010713            1 MKFYEG-SVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~--~~~~Ls~~~vl~i~~QIl~aL~yLHs-~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~   76 (503)
                      |||++| +|.+++...  ....+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++......
T Consensus        88 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~  167 (269)
T cd08528          88 MDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPE  167 (269)
T ss_pred             EecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccceeecccc
Confidence            689985 899888653  34679999999999999999999996 68999999999999999999999999998765431


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcH
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP  156 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~  156 (503)
                      .    ......++..|+|||.+.+.   .++.++|+||||+++|+|++|..||...........+......+.....+++
T Consensus       168 ~----~~~~~~~~~~~~~Pe~~~~~---~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (269)
T cd08528         168 S----KLTSVVGTILYSCPEIVKNE---PYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEGMYSE  240 (269)
T ss_pred             c----ccccccCcccCcChhhhcCC---CCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCCcccCCH
Confidence            1    33455688899999999743   5788999999999999999999999887776666665544333333346789


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 010713          157 AVENVLLGCFEYDLRSRPLMTDILRVFK  184 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~RPS~~elL~~L~  184 (503)
                      .+.++|.+||+.||++||++.|+..+++
T Consensus       241 ~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         241 DVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             HHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            9999999999999999999999998775

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.94  E-value=4.5e-26  Score=225.15  Aligned_cols=182  Identities=20%  Similarity=0.277  Sum_probs=139.4

Q ss_pred             CcCCC-CCHHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCC
Q 010713            1 MKFYE-GSVGDRMAQLK---GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~---~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~   76 (503)
                      |||++ |+|.+++....   ...++...+..++.|++.||+|||+++++|+||||+||+++.++.++|+|||++......
T Consensus        74 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~  153 (269)
T cd05087          74 MEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKE  153 (269)
T ss_pred             EECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCc
Confidence            79998 69999997532   234677788899999999999999999999999999999999999999999998654221


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCC----CCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc-C---C
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVR----GPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQ-E---I  147 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~----~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~-~---~  147 (503)
                      .. ........++..|+|||++.+...    ..++.++|+||||+++|+|++ |..||......+......... .   .
T Consensus       154 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  232 (269)
T cd05087         154 DY-YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPK  232 (269)
T ss_pred             ce-eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCC
Confidence            11 111223456788999999864311    135789999999999999996 999998776665544333221 1   1


Q ss_pred             CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 010713          148 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  184 (503)
Q Consensus       148 ~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~  184 (503)
                      +......++.+.+++.+|+ .+|++|||+.+|+..|+
T Consensus       233 ~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         233 PRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             CccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            2233457889999999999 68999999999998764

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.94  E-value=5.5e-26  Score=230.81  Aligned_cols=179  Identities=20%  Similarity=0.266  Sum_probs=147.0

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||+.|+|.+++.. ....+++.+++.++.||+.||+|||++|++|+||+|+||+++.++.++|+|||++....      
T Consensus       100 ~e~~~~~l~~~l~~-~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~------  172 (313)
T cd06633         100 MEYCLGSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS------  172 (313)
T ss_pred             EecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccC------
Confidence            78999999998864 45679999999999999999999999999999999999999999999999999875421      


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHHH
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVEN  160 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~~  160 (503)
                       ......++..|+|||++.......++.++|+||||+++|+|++|..||...+.......+............++..+++
T Consensus       173 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  251 (313)
T cd06633         173 -PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRG  251 (313)
T ss_pred             -CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHH
Confidence             2234568889999999854323467889999999999999999999998876655555554433322334567889999


Q ss_pred             HHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          161 VLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       161 LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      |+.+||+.+|.+||++.+++.      ++++..
T Consensus       252 li~~~l~~~P~~Rp~~~~~l~------~~~~~~  278 (313)
T cd06633         252 FVDYCLQKIPQERPASAELLR------HDFVRR  278 (313)
T ss_pred             HHHHHccCChhhCcCHHHHhc------CcccCC
Confidence            999999999999999999998      666543

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.94  E-value=3e-26  Score=227.39  Aligned_cols=174  Identities=22%  Similarity=0.366  Sum_probs=141.3

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC-cEEEEecCCcccccCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD-RAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~-~vKL~DFGla~~~~~~~~   78 (503)
                      |||++ |+|.+++..  ...+++.++..++.|+++||+|||+.|++|+||||+||+++.++ .++|+|||++.....   
T Consensus        88 ~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~---  162 (267)
T PHA03390         88 MDYIKDGDLFDLLKK--EGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGT---  162 (267)
T ss_pred             EEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCC---
Confidence            78997 599999963  34899999999999999999999999999999999999999998 999999998865432   


Q ss_pred             CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHH-HHHH-hccCCCCCCCCCcH
Q 010713           79 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIY-DAVV-RRQEIPPIPSGLPP  156 (503)
Q Consensus        79 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~-~~i~-~~~~~~~~~~~~s~  156 (503)
                          .....++..|+|||++.+.   .++.++|+||||+++|+|++|..||......... .... ........+..+++
T Consensus       163 ----~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (267)
T PHA03390        163 ----PSCYDGTLDYFSPEKIKGH---NYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSK  235 (267)
T ss_pred             ----CccCCCCCcccChhhhcCC---CCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcccccCH
Confidence                1234678899999999743   5788999999999999999999999865433221 1111 11233345567999


Q ss_pred             HHHHHHHHhhhcCCCCCCC-HHHHHHHHHhhccCcCC
Q 010713          157 AVENVLLGCFEYDLRSRPL-MTDILRVFKSSQNSVHS  192 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~RPS-~~elL~~L~~i~~~~~~  192 (503)
                      .+.++|.+||+.+|.+||+ ++++++      ++|+.
T Consensus       236 ~~~~li~~~l~~~p~~R~~~~~~~l~------h~~~~  266 (267)
T PHA03390        236 NANDFVQSMLKYNINYRLTNYNEIIK------HPFLK  266 (267)
T ss_pred             HHHHHHHHHhccChhhCCchHHHHhc------CCccc
Confidence            9999999999999999995 699987      76653

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.94  E-value=3e-26  Score=226.48  Aligned_cols=170  Identities=22%  Similarity=0.318  Sum_probs=134.2

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCc-------EEEEecCCccc
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR-------AVLGDVGIPHL   72 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~-------vKL~DFGla~~   72 (503)
                      |||+++ +|..++.. ....+++..++.++.||+.||+|||+++|+||||||+|||++.++.       ++++|||++..
T Consensus        83 ~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~  161 (262)
T cd05077          83 EEFVEFGPLDLFMHR-KSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPIT  161 (262)
T ss_pred             EecccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCcc
Confidence            789985 67666643 4567999999999999999999999999999999999999987654       89999998865


Q ss_pred             ccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHhccCCCCCC
Q 010713           73 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEML-TGVQPRCGRSVDEIYDAVVRRQEIPPIP  151 (503)
Q Consensus        73 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLl-tG~~Pf~~~~~~e~~~~i~~~~~~~~~~  151 (503)
                      ...       .....++..|+|||.+...  ..++.++|||||||++|+|+ +|..||......+... ...  ......
T Consensus       162 ~~~-------~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~-~~~--~~~~~~  229 (262)
T cd05077         162 VLS-------RQECVERIPWIAPECVEDS--KNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER-FYE--GQCMLV  229 (262)
T ss_pred             ccC-------cccccccccccChhhhcCC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH-HHh--cCccCC
Confidence            421       1234577889999988632  35788999999999999998 5888987765544322 111  112233


Q ss_pred             CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q 010713          152 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVF  183 (503)
Q Consensus       152 ~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L  183 (503)
                      ...+.++.+||.+||+.||.+||++.+|++.|
T Consensus       230 ~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         230 TPSCKELADLMTHCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             CCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence            44568899999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.94  E-value=2.8e-26  Score=246.39  Aligned_cols=181  Identities=22%  Similarity=0.257  Sum_probs=138.8

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||+.|+|.+++.. ....+++.+++.++.||+.||+|||++||+||||||+|||++.++.++|+|||+++....... .
T Consensus       239 ~e~~~~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~-~  316 (461)
T PHA03211        239 LPKYRSDLYTYLGA-RLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS-T  316 (461)
T ss_pred             EEccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccc-c
Confidence            67888999998864 345799999999999999999999999999999999999999999999999999876533211 1


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCC--------ChHHHHHHHHhccCC-CCCC
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR--------SVDEIYDAVVRRQEI-PPIP  151 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~--------~~~e~~~~i~~~~~~-~~~~  151 (503)
                      .......||+.|+|||++.+.   .++.++|||||||++|||++|..|+...        ...++...+...... ..++
T Consensus       317 ~~~~~~~GT~~Y~APE~~~~~---~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~  393 (461)
T PHA03211        317 PFHYGIAGTVDTNAPEVLAGD---PYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFP  393 (461)
T ss_pred             ccccccCCCcCCcCHHHHcCC---CCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCC
Confidence            112245799999999999754   6889999999999999999987654321        122222222211100 0000


Q ss_pred             -------------------------------CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          152 -------------------------------SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       152 -------------------------------~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                                                     ..++..+.+||.+||+.||.+|||+.|+|+      ++||.
T Consensus       394 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~------hp~f~  459 (461)
T PHA03211        394 QHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLR------LPLFQ  459 (461)
T ss_pred             CCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhh------CcccC
Confidence                                           134568999999999999999999999999      77764

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.94  E-value=2.6e-26  Score=240.38  Aligned_cols=177  Identities=25%  Similarity=0.378  Sum_probs=154.7

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC----CcEEEEecCCcccccC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA----DRAVLGDVGIPHLLLG   75 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~----~~vKL~DFGla~~~~~   75 (503)
                      ||+|+ |.|.|.+...   .+++.++..++.|++.++.|||+.||+||||||+|+|+...    +.++++|||++.....
T Consensus       115 mEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~  191 (382)
T KOG0032|consen  115 MELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP  191 (382)
T ss_pred             EEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC
Confidence            79999 5999999864   49999999999999999999999999999999999999644    4799999999988654


Q ss_pred             CCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC--CCCCC
Q 010713           76 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP--PIPSG  153 (503)
Q Consensus        76 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~--~~~~~  153 (503)
                          .......+||+.|+|||++...   +|+..+|+||+|+++|.|++|.+||.+.+.......+.......  +....
T Consensus       192 ----~~~~~~~~Gtp~y~APEvl~~~---~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~  264 (382)
T KOG0032|consen  192 ----GERLHTIVGTPEYVAPEVLGGR---PYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDD  264 (382)
T ss_pred             ----CceEeeecCCccccCchhhcCC---CCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccc
Confidence                3455678999999999999843   79999999999999999999999999999888888887765432  23467


Q ss_pred             CcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          154 LPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       154 ~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      ++..++++|++||..||.+|+++.++++      |+|...
T Consensus       265 is~~akd~i~~ll~~dp~~R~ta~~~L~------HpWi~~  298 (382)
T KOG0032|consen  265 ISESAKDFIRKLLEFDPRKRLTAAQALQ------HPWIKS  298 (382)
T ss_pred             cCHHHHHHHHHhcccCcccCCCHHHHhc------CccccC
Confidence            8999999999999999999999999999      777543

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=4.3e-26  Score=224.69  Aligned_cols=175  Identities=27%  Similarity=0.442  Sum_probs=145.8

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.  ..+.+++..+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||++.........
T Consensus        85 ~e~~~~~~L~~~~~--~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~  162 (264)
T cd06653          85 VEYMPGGSIKDQLK--AYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMS  162 (264)
T ss_pred             EEeCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccccccccccc
Confidence            588875 8999986  3456899999999999999999999999999999999999999999999999998765332111


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........++..|+|||.+.+.   .++.++|+|||||++|+|++|..||..........++......+.++..+++.+.
T Consensus       163 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  239 (264)
T cd06653         163 GTGIKSVTGTPYWMSPEVISGE---GYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACR  239 (264)
T ss_pred             CccccccCCcccccCHhhhcCC---CCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcccCHHHH
Confidence            1222345688999999998753   5788999999999999999999999887666666555554455667888999999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 010713          160 NVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ++|.+||. +|..||++.+++.
T Consensus       240 ~~i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         240 DFLKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             HHHHHHhc-CcccCccHHHHhc
Confidence            99999999 5799999999887

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.94  E-value=3.9e-26  Score=232.41  Aligned_cols=183  Identities=19%  Similarity=0.250  Sum_probs=148.9

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++++|.+++.  ....+++..++.++.||+.||+|||++||+|+||||+||+++.++.++|+|||++..........
T Consensus        83 ~e~~~~~l~~~l~--~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~  160 (330)
T cd07834          83 TELMETDLHKVIK--SPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEK  160 (330)
T ss_pred             ecchhhhHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccccccc
Confidence            6889988998886  44589999999999999999999999999999999999999999999999999998764432111


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC-----------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-----------  149 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~-----------  149 (503)
                      .......++..|+|||.+.+..  .++.++|+||||+++|+|++|..||.+....+.+..+......+.           
T Consensus       161 ~~~~~~~~~~~y~aPE~~~~~~--~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  238 (330)
T cd07834         161 GFLTEYVVTRWYRAPELLLSSS--RYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEK  238 (330)
T ss_pred             ccccccccccCcCCceeeeccc--CCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccc
Confidence            2234456788999999997542  578899999999999999999999998877666555544221111           


Q ss_pred             ------------------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          150 ------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       150 ------------------~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                                        ....++..+.++|.+||+.+|++||++.++++      ++|+..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~------~~~~~~  294 (330)
T cd07834         239 ARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALA------HPYLAQ  294 (330)
T ss_pred             hhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHh------CccHHh
Confidence                              12346788999999999999999999999998      666653

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.94  E-value=3.7e-26  Score=223.00  Aligned_cols=171  Identities=23%  Similarity=0.349  Sum_probs=136.4

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC-------cEEEEecCCccc
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD-------RAVLGDVGIPHL   72 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~-------~vKL~DFGla~~   72 (503)
                      |||++ |+|.+++.. ....++...+..++.||+.||+|||++||+|+||||+||+++.++       .++|+|||++..
T Consensus        79 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~  157 (259)
T cd05037          79 EEYVKFGPLDVFLHR-EKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPIT  157 (259)
T ss_pred             EEcCCCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCcccc
Confidence            68998 589998874 233789999999999999999999999999999999999999887       799999999876


Q ss_pred             ccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCC
Q 010713           73 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP  151 (503)
Q Consensus        73 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~  151 (503)
                      ...       .....++..|+|||++.+. ...++.++|+||||+++|+|++ |..||......+....... .  ...+
T Consensus       158 ~~~-------~~~~~~~~~y~aPE~~~~~-~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~-~--~~~~  226 (259)
T cd05037         158 VLS-------REERVERIPWIAPECIRNG-QASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQD-Q--HRLP  226 (259)
T ss_pred             ccc-------ccccccCCCccChhhhcCC-CCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhc-C--CCCC
Confidence            432       1234566789999998753 1357889999999999999999 6888877654443333221 1  1222


Q ss_pred             CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q 010713          152 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVF  183 (503)
Q Consensus       152 ~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L  183 (503)
                      ......+.++|.+||..+|.+||++.++++.|
T Consensus       227 ~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l  258 (259)
T cd05037         227 MPDCAELANLINQCWTYDPTKRPSFRAILRDL  258 (259)
T ss_pred             CCCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            23348999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.94  E-value=6.5e-26  Score=227.03  Aligned_cols=181  Identities=20%  Similarity=0.261  Sum_probs=144.1

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||+.|+|.+++... ...+++.+++.++.||++||+|||++|++|+||+|+||+++.++.++|+|||++.......   
T Consensus        81 ~e~~~~~L~~~i~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~---  156 (298)
T cd07841          81 FEFMETDLEKVIKDK-SIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN---  156 (298)
T ss_pred             EcccCCCHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC---
Confidence            789988999999642 2379999999999999999999999999999999999999999999999999987654321   


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------  148 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~------------  148 (503)
                      .......+++.|+|||.+.+.  ..++.++|+|||||++|+|++|.+||.+....+....+......+            
T Consensus       157 ~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (298)
T cd07841         157 RKMTHQVVTRWYRAPELLFGA--RHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLP  234 (298)
T ss_pred             ccccccccceeeeCHHHHhCC--CCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccc
Confidence            122334567889999988542  256889999999999999999988888766555444443211100            


Q ss_pred             ---------C-----CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          149 ---------P-----IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       149 ---------~-----~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                               .     .....+..+.++|.+||+.||++|||+.|+++      ++|+.+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~------~~~~~~  287 (298)
T cd07841         235 DYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE------HPYFSN  287 (298)
T ss_pred             ccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh------CccccC
Confidence                     0     11345788999999999999999999999999      777765

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.94  E-value=4.3e-26  Score=230.26  Aligned_cols=185  Identities=16%  Similarity=0.186  Sum_probs=141.7

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.......+++..+..++.|++.||+|||+++|+|+||||+||+++.++.++|+||+.+.........
T Consensus        78 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~  157 (314)
T cd08216          78 SPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKR  157 (314)
T ss_pred             EeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccc
Confidence            68998 58999998655567999999999999999999999999999999999999999999999999988654322111


Q ss_pred             ----CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC--------
Q 010713           80 ----SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI--------  147 (503)
Q Consensus        80 ----~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~--------  147 (503)
                          ........++..|+|||++... ...++.++|+|||||++|+|++|..||..................        
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (314)
T cd08216         158 QRVVHDFPKSSVKNLPWLSPEVLQQN-LQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTY  236 (314)
T ss_pred             ccccccccccccccccccCHHHhcCC-CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCch
Confidence                1112234567789999998753 234788999999999999999999999876544332221111000        


Q ss_pred             ------------------------CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          148 ------------------------PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       148 ------------------------~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                                              ......++.++.+|+.+||..||++|||+.++++      ++++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~------~p~~~  299 (314)
T cd08216         237 PLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN------HSFFK  299 (314)
T ss_pred             hhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc------CchHh
Confidence                                    0011233567889999999999999999999999      66654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.94  E-value=4.8e-26  Score=227.80  Aligned_cols=177  Identities=20%  Similarity=0.336  Sum_probs=145.1

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||+.| +|.+++..   ..++..++..++.|++.||+|||++|++||||+|+||+++.++.++|+|||++......   
T Consensus        95 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~---  168 (285)
T cd06648          95 MEFLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE---  168 (285)
T ss_pred             EeccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccC---
Confidence            578875 99998853   67999999999999999999999999999999999999999999999999987654321   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC--CCCCCcHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--IPSGLPPA  157 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~--~~~~~s~~  157 (503)
                      ........+++.|+|||.+.+.   .++.++|+||||+++|+|++|..||...+..+....+... ..+.  .+..++..
T Consensus       169 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  244 (285)
T cd06648         169 VPRRKSLVGTPYWMAPEVISRL---PYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN-LPPKLKNLHKVSPR  244 (285)
T ss_pred             CcccccccCCccccCHHHhcCC---CCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhc-CCCCCcccccCCHH
Confidence            1122345688999999998743   5788999999999999999999999887776666555443 2222  22347899


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          158 VENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      +.++|.+||..+|++||++.++++      ++|+..
T Consensus       245 l~~li~~~l~~~p~~Rpt~~~il~------~~~~~~  274 (285)
T cd06648         245 LRSFLDRMLVRDPAQRATAAELLN------HPFLAK  274 (285)
T ss_pred             HHHHHHHHcccChhhCcCHHHHcc------Cccccc
Confidence            999999999999999999999998      666643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.94  E-value=1.1e-25  Score=222.86  Aligned_cols=182  Identities=19%  Similarity=0.269  Sum_probs=141.6

Q ss_pred             CcCCC-CCHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCC
Q 010713            1 MKFYE-GSVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~--~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~   77 (503)
                      |||++ |+|.+++....  ...++...+..++.||+.||+|||+++++|+||||+|||++.++.++|+|||++.......
T Consensus        74 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~  153 (268)
T cd05086          74 FEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKED  153 (268)
T ss_pred             EecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcch
Confidence            79998 59999997542  2456778889999999999999999999999999999999999999999999875432111


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCC----CCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccC----CC
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEV----RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQE----IP  148 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~----~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~----~~  148 (503)
                      . ........++..|+|||++....    ...++.++|+||||+++|+|++ +..||......+.+..+.....    .+
T Consensus       154 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  232 (268)
T cd05086         154 Y-IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKP  232 (268)
T ss_pred             h-hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCC
Confidence            0 11123456788999999985321    2245789999999999999997 5778987777666665544322    23


Q ss_pred             CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 010713          149 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  184 (503)
Q Consensus       149 ~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~  184 (503)
                      .++..+++.+.+++..|+ .+|++||++.++++.|.
T Consensus       233 ~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         233 QLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             ccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            445568899999999999 68999999999998774

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.94  E-value=4e-26  Score=230.15  Aligned_cols=172  Identities=22%  Similarity=0.339  Sum_probs=141.5

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.   ...+++.+++.++.|++.||+|||++|++|+||||+||+++.++.++|+|||++......   
T Consensus        97 ~e~~~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~---  170 (297)
T cd06659          97 MEFLQGGALTDIVS---QTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD---  170 (297)
T ss_pred             EecCCCCCHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccc---
Confidence            688985 8887763   456899999999999999999999999999999999999999999999999988654321   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccC-CCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~-~~~~~~~~s~~l  158 (503)
                      ........++..|+|||++.+.   .++.++|+|||||++|+|++|..||......+....+..... .......++..+
T Consensus       171 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  247 (297)
T cd06659         171 VPKRKSLVGTPYWMAPEVISRT---PYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVL  247 (297)
T ss_pred             cccccceecCccccCHHHHccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHH
Confidence            1122345688999999999743   578899999999999999999999987776665554433211 122335678999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHH
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      .++|.+||+.+|++||++.++++
T Consensus       248 ~~~i~~~l~~~P~~Rps~~~ll~  270 (297)
T cd06659         248 RDFLERMLTREPQERATAQELLD  270 (297)
T ss_pred             HHHHHHHhcCCcccCcCHHHHhh
Confidence            99999999999999999999999

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=3.6e-26  Score=226.19  Aligned_cols=172  Identities=22%  Similarity=0.362  Sum_probs=141.0

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.   ...+++..++.++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||++.......  
T Consensus        81 ~e~~~~~~L~~~~~---~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~--  155 (277)
T cd06917          81 MEYAEGGSVRTLMK---AGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS--  155 (277)
T ss_pred             EecCCCCcHHHHHH---ccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc--
Confidence            689975 8988885   3479999999999999999999999999999999999999999999999999987664322  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCC-CCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS-GLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~-~~s~~l  158 (503)
                       .......|+..|+|||.+.+.  ..++.++|+||||+++|+|++|..||...........+... ..+.++. .++.++
T Consensus       156 -~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  231 (277)
T cd06917         156 -SKRSTFVGTPYWMAPEVITEG--KYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKS-KPPRLEDNGYSKLL  231 (277)
T ss_pred             -cccccccCCcceeCHHHhccC--CccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccC-CCCCCCcccCCHHH
Confidence             222345688899999998642  24688999999999999999999999877665544333222 2233333 388999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHH
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      .+++.+||+.||++||++.+++.
T Consensus       232 ~~~i~~~l~~~p~~R~~~~~il~  254 (277)
T cd06917         232 REFVAACLDEEPKERLSAEELLK  254 (277)
T ss_pred             HHHHHHHcCCCcccCcCHHHHhh
Confidence            99999999999999999999988

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.94  E-value=1.1e-25  Score=223.15  Aligned_cols=175  Identities=21%  Similarity=0.327  Sum_probs=141.0

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++|+|.+++.......+++.++..++.|++.+|.|||++|++|+||+|+||+++.++.++|+|||++......    
T Consensus        77 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~----  152 (283)
T cd07830          77 FEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR----  152 (283)
T ss_pred             EecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCC----
Confidence            7899999999997544457899999999999999999999999999999999999999999999999998765331    


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------  148 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~------------  148 (503)
                      .......++..|+|||++...  ..++.++|+||||+++++|++|..||......+.+..+......+            
T Consensus       153 ~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (283)
T cd07830         153 PPYTDYVSTRWYRAPEILLRS--TSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLA  230 (283)
T ss_pred             CCcCCCCCcccccCceeeecC--cCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhh
Confidence            122345678899999988542  247889999999999999999999998776655444333211110            


Q ss_pred             ----------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          149 ----------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       149 ----------------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                                      ......+..+.++|.+||+.||++||++.|++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         231 SKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             ccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence                            001223688999999999999999999999987

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.94  E-value=6.2e-26  Score=227.54  Aligned_cols=178  Identities=20%  Similarity=0.233  Sum_probs=138.8

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC-
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP-   79 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~-   79 (503)
                      |||++++|.+.+.. ....+++.+++.++.||+.||+|||++|++|+||||+||+++.++.++|+|||++......... 
T Consensus        98 ~e~~~~~l~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~  176 (310)
T cd07865          98 FEFCEHDLAGLLSN-KNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSK  176 (310)
T ss_pred             EcCCCcCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcccC
Confidence            68999999988864 3457999999999999999999999999999999999999999999999999998765432211 


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC-----------
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP-----------  148 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~-----------  148 (503)
                      ........++..|+|||.+.+.  ..++.++|+||||+++|+|++|..||.+.+.......+.......           
T Consensus       177 ~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (310)
T cd07865         177 PNRYTNRVVTLWYRPPELLLGE--RDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKL  254 (310)
T ss_pred             CCCccCcccCccccCcHHhcCC--cccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccch
Confidence            1122344678899999988643  246789999999999999999999998776554433322211000           


Q ss_pred             ------CC-------------CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          149 ------PI-------------PSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       149 ------~~-------------~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                            ..             +...+..+.++|.+||..||.+|||+.++++
T Consensus       255 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~  306 (310)
T cd07865         255 ELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN  306 (310)
T ss_pred             hhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence                  00             1123567889999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.94  E-value=5.5e-26  Score=230.09  Aligned_cols=173  Identities=21%  Similarity=0.292  Sum_probs=142.7

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||+.|+|.+++.. ....+++.++..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++.....     
T Consensus        94 ~e~~~~~l~~~~~~-~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~-----  167 (308)
T cd06634          94 MEYCLGSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-----  167 (308)
T ss_pred             EEccCCCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecC-----
Confidence            68999999888864 345689999999999999999999999999999999999999999999999998865432     


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHHH
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVEN  160 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~~  160 (503)
                        .....+++.|+|||.+.+.....++.++|||||||++|+|++|..||......+....+............++..+.+
T Consensus       168 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (308)
T cd06634         168 --ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRN  245 (308)
T ss_pred             --cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHH
Confidence              123467889999999853223457889999999999999999999998766555444444333322234578899999


Q ss_pred             HHHHhhhcCCCCCCCHHHHHH
Q 010713          161 VLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       161 LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +|.+||..+|++||++.++++
T Consensus       246 li~~cl~~~P~~Rp~~~~ll~  266 (308)
T cd06634         246 FVDSCLQKIPQDRPTSEVLLK  266 (308)
T ss_pred             HHHHHhhCCcccCCCHHHHhh
Confidence            999999999999999999998

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.94  E-value=1.1e-26  Score=246.80  Aligned_cols=175  Identities=22%  Similarity=0.417  Sum_probs=151.0

Q ss_pred             cCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecccCCCcEEEccC-CcEEEEecCCcccccCCC
Q 010713            2 KFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG--ILVLNLKPFNFILNEA-DRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         2 Ey~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~g--IvHrDLKP~NILld~~-~~vKL~DFGla~~~~~~~   77 (503)
                      |++. |+|..|+.  +.+.++...+..|++||++||.|||++.  |||||||.+||+|+.+ |.+||+|+|+|.....  
T Consensus       123 EL~TSGtLr~Y~k--k~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~--  198 (632)
T KOG0584|consen  123 ELFTSGTLREYRK--KHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK--  198 (632)
T ss_pred             ecccCCcHHHHHH--HhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhc--
Confidence            4555 89999997  5678899999999999999999999996  9999999999999865 8999999999987643  


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCC-CChHHHHHHHHhccCCCCCCCCCcH
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVRRQEIPPIPSGLPP  156 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~-~~~~e~~~~i~~~~~~~~~~~~~s~  156 (503)
                         ......+|||.|||||++..    .|+..+||||||++++||+|+..||.. .++.++|.++..+..+..+..--++
T Consensus       199 ---s~aksvIGTPEFMAPEmYEE----~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dP  271 (632)
T KOG0584|consen  199 ---SHAKSVIGTPEFMAPEMYEE----NYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDP  271 (632)
T ss_pred             ---cccceeccCccccChHHHhh----hcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCH
Confidence               23345799999999999963    589999999999999999999999987 4566778777776655556666789


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCC
Q 010713          157 AVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDG  194 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~  194 (503)
                      ++++||.+||.. ..+|||+.|+|+      ++|+...
T Consensus       272 evr~fIekCl~~-~~~R~sa~eLL~------d~Ff~~d  302 (632)
T KOG0584|consen  272 EVREFIEKCLAT-KSERLSAKELLK------DPFFDED  302 (632)
T ss_pred             HHHHHHHHHhcC-chhccCHHHHhh------Chhhccc
Confidence            999999999999 999999999999      7777654

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.94  E-value=7.2e-26  Score=239.27  Aligned_cols=165  Identities=18%  Similarity=0.283  Sum_probs=136.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCCCCCCCccCCCCCCCcccc
Q 010713           19 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQW   98 (503)
Q Consensus        19 ~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l   98 (503)
                      .+++..++.++.||+.||+|||+++++||||||+|||++.++.++|+|||++........ ........++..|+|||.+
T Consensus       235 ~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~-~~~~~~~~~~~~y~aPE~~  313 (401)
T cd05107         235 ALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSN-YISKGSTFLPLKWMAPESI  313 (401)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceecccccc-cccCCCcCCCCceeChHHh
Confidence            467788999999999999999999999999999999999999999999999876432111 1112234567889999999


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHH
Q 010713           99 QPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMT  177 (503)
Q Consensus        99 ~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~  177 (503)
                      .+.   .++.++|+||||+++|||++ |..||......+...........+..+..++.++.+|+.+||..+|.+||++.
T Consensus       314 ~~~---~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~  390 (401)
T cd05107         314 FNN---LYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFS  390 (401)
T ss_pred             cCC---CCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHH
Confidence            743   57889999999999999998 89999876666655555555555667778899999999999999999999999


Q ss_pred             HHHHHHHhhc
Q 010713          178 DILRVFKSSQ  187 (503)
Q Consensus       178 elL~~L~~i~  187 (503)
                      +|++.|+.+.
T Consensus       391 ell~~L~~~~  400 (401)
T cd05107         391 QLVHLVGDLL  400 (401)
T ss_pred             HHHHHHHHHh
Confidence            9999998763

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.94  E-value=9.7e-26  Score=222.54  Aligned_cols=177  Identities=25%  Similarity=0.437  Sum_probs=141.8

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++..  .+.+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++....... .
T Consensus        87 ~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-~  163 (272)
T cd06629          87 LEYVPGGSIGSCLRT--YGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDIY-D  163 (272)
T ss_pred             EecCCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccccccc-c
Confidence            689974 89999863  4679999999999999999999999999999999999999999999999999987643211 1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCC----CCCc
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP----SGLP  155 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~----~~~s  155 (503)
                      ........++..|+|||.+.... ..++.++|+||||+++|++++|..||......+....+........++    ..++
T Consensus       164 ~~~~~~~~~~~~y~~PE~~~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (272)
T cd06629         164 NDQNMSMQGSVFWMAPEVIHSYS-QGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLS  242 (272)
T ss_pred             ccccccccCCccccCHHHhcccc-CCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCC
Confidence            11223456788999999987542 247889999999999999999999997665554443333322223332    3568


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          156 PAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ..+.++|.+||..+|++||++.++++
T Consensus       243 ~~~~~li~~~l~~~p~~Rps~~~il~  268 (272)
T cd06629         243 PVALDFLNACFTINPDNRPTARELLQ  268 (272)
T ss_pred             HHHHHHHHHHhcCChhhCCCHHHHhh
Confidence            99999999999999999999999988

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.94  E-value=8e-26  Score=222.96  Aligned_cols=176  Identities=28%  Similarity=0.401  Sum_probs=138.8

Q ss_pred             CcCCC-CCHHHHHHhhcCCCC--CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEcc-CCcEEEEecCCcccccCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKL--SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE-ADRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~L--s~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~-~~~vKL~DFGla~~~~~~   76 (503)
                      |||++ ++|.+++.. ....+  +...+..++.||+.||+|||++||+|+||||+||+++. ++.++|+|||++......
T Consensus        84 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~  162 (268)
T cd06624          84 MEQVPGGSLSALLRS-KWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGI  162 (268)
T ss_pred             EecCCCCCHHHHHHH-hcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccC
Confidence            68888 499999874 22445  88899999999999999999999999999999999976 678999999998665321


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhccCCCCCCCCCc
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE-IYDAVVRRQEIPPIPSGLP  155 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e-~~~~i~~~~~~~~~~~~~s  155 (503)
                      .   .......+++.|+|||.+... ...++.++|+||||+++|+|++|..||....... ...........+.++..++
T Consensus       163 ~---~~~~~~~~~~~~~aPE~~~~~-~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (268)
T cd06624         163 N---PCTETFTGTLQYMAPEVIDKG-PRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLS  238 (268)
T ss_pred             C---CccccCCCCccccChhhhccc-cccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccC
Confidence            1   122234578899999998643 2246789999999999999999999997643322 2222222233455677889


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          156 PAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +++.+++.+||+.+|++||++.++++
T Consensus       239 ~~~~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         239 AEAKNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             HHHHHHHHHHcCCCchhCCCHHHHHh
Confidence            99999999999999999999999998

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.94  E-value=8.9e-26  Score=222.65  Aligned_cols=181  Identities=20%  Similarity=0.335  Sum_probs=144.8

Q ss_pred             CcCCC-CCHHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccC
Q 010713            1 MKFYE-GSVGDRMAQLK----GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG   75 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~----~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~   75 (503)
                      |||+. |+|.+++....    ...++...++.++.|++.||+|||++||+|+||||+||+++.++.++|+|||++.....
T Consensus        86 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~  165 (273)
T cd05074          86 LPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYS  165 (273)
T ss_pred             EecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccccccccC
Confidence            35666 68888775321    23578999999999999999999999999999999999999999999999999876532


Q ss_pred             CCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCC
Q 010713           76 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGL  154 (503)
Q Consensus        76 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~  154 (503)
                      ... ........+++.|++||.+...   .++.++|+|||||++|+|++ |..||.+....+....+... .....+...
T Consensus       166 ~~~-~~~~~~~~~~~~~~~pe~~~~~---~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~  240 (273)
T cd05074         166 GDY-YRQGCASKLPVKWLALESLADN---VYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKG-NRLKQPPDC  240 (273)
T ss_pred             Ccc-eecCCCccCchhhcCHhHHhcC---ccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcC-CcCCCCCCC
Confidence            211 1111233456789999998743   57889999999999999999 89999888777666655443 333445678


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhh
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILRVFKSS  186 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i  186 (503)
                      +..+.+++.+||+.+|++||++.++++.|+++
T Consensus       241 ~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         241 LEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            89999999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.94  E-value=4.5e-26  Score=229.46  Aligned_cols=179  Identities=22%  Similarity=0.249  Sum_probs=137.5

Q ss_pred             CcCCCCCHHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEcc----CCcEEEEecCCcccc
Q 010713            1 MKFYEGSVGDRMAQLK---GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE----ADRAVLGDVGIPHLL   73 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~---~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~----~~~vKL~DFGla~~~   73 (503)
                      |||++++|.+++....   ...+++..+..++.||+.||+|||+++|+||||||+||+++.    ++.+||+|||++...
T Consensus        83 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~  162 (316)
T cd07842          83 FDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLF  162 (316)
T ss_pred             EeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCcccccc
Confidence            7899999988886432   237899999999999999999999999999999999999999    899999999998765


Q ss_pred             cCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHH---------HHHHHHh-
Q 010713           74 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE---------IYDAVVR-  143 (503)
Q Consensus        74 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e---------~~~~i~~-  143 (503)
                      ..............++..|+|||.+.+.  ..++.++|+||||+++|+|++|..||.+.....         ....+.. 
T Consensus       163 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (316)
T cd07842         163 NAPLKPLADLDPVVVTIWYRAPELLLGA--RHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEV  240 (316)
T ss_pred             CCCcccccccCCccccccccCHHHHhCC--CCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHH
Confidence            4322212223345678899999988643  246889999999999999999999997644321         1111100 


Q ss_pred             -----------------------ccCCCCCC-----------CCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          144 -----------------------RQEIPPIP-----------SGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       144 -----------------------~~~~~~~~-----------~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                                             ......++           ...+..+.++|.+||+.||++|||+.|+++
T Consensus       241 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~  312 (316)
T cd07842         241 LGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE  312 (316)
T ss_pred             hCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence                                   00001111           156778999999999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.94  E-value=8.8e-26  Score=224.77  Aligned_cols=176  Identities=22%  Similarity=0.385  Sum_probs=141.7

Q ss_pred             CcCCCC-CHHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecccCCCcEEEccCCcEEEEecCCcccccCCC
Q 010713            1 MKFYEG-SVGDRMAQLK-GGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~-~~~Ls~~~vl~i~~QIl~aL~yLHs-~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~   77 (503)
                      |||++| +|.+++.... ...+++..+..++.||+.||.|||+ .+|+|+||||+||+++.++.++|+|||++.....  
T Consensus        78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~--  155 (286)
T cd06622          78 MEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVA--  155 (286)
T ss_pred             EeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccC--
Confidence            799986 8888775421 3479999999999999999999997 5999999999999999999999999999865532  


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCC---CCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh--ccCCCCCCC
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEV---RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR--RQEIPPIPS  152 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~---~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~--~~~~~~~~~  152 (503)
                         .......+++.|+|||.+.+..   ...++.++|+|||||++|+|++|..||...........+..  ....+.++.
T Consensus       156 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  232 (286)
T cd06622         156 ---SLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPS  232 (286)
T ss_pred             ---CccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCc
Confidence               1223446788999999986431   22457899999999999999999999977655444333221  233455667


Q ss_pred             CCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          153 GLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       153 ~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      .++.++.++|.+||+.+|++||++.++++
T Consensus       233 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  261 (286)
T cd06622         233 GYSDDAQDFVAKCLNKIPNRRPTYAQLLE  261 (286)
T ss_pred             ccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence            79999999999999999999999999998

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=1.2e-26  Score=243.81  Aligned_cols=172  Identities=21%  Similarity=0.323  Sum_probs=152.7

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      ||||-||-.|++.- ...+|.+.++..|+.+.+.||+|||+++.||||||..|||+++.|.+||+|||.|...       
T Consensus       105 MEYClGSAsDlleV-hkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~-------  176 (948)
T KOG0577|consen  105 MEYCLGSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIM-------  176 (948)
T ss_pred             HHHHhccHHHHHHH-HhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhc-------
Confidence            89999999999986 4567999999999999999999999999999999999999999999999999998764       


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCC-CCCCcHHHH
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPI-PSGLPPAVE  159 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~-~~~~s~~l~  159 (503)
                      ...++++|||+|||||++..-..+.|+-++||||||+++.||...++|+.+.+.......|.... .|.+ ....+..++
T Consensus       177 ~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNe-sPtLqs~eWS~~F~  255 (948)
T KOG0577|consen  177 APANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE-SPTLQSNEWSDYFR  255 (948)
T ss_pred             CchhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcC-CCCCCCchhHHHHH
Confidence            24468899999999999987667889999999999999999999999988888777766665543 3333 466889999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 010713          160 NVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +|+..||++-|.+|||..+++.
T Consensus       256 ~Fvd~CLqKipqeRptse~ll~  277 (948)
T KOG0577|consen  256 NFVDSCLQKIPQERPTSEELLK  277 (948)
T ss_pred             HHHHHHHhhCcccCCcHHHHhh
Confidence            9999999999999999999987

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.94  E-value=9e-26  Score=232.23  Aligned_cols=182  Identities=21%  Similarity=0.290  Sum_probs=141.6

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEcc-CCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE-ADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~-~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++++|.+++.   ...+++..+..++.||++||+|||++||+||||||+||+++. ++.++|+|||++.........
T Consensus        95 ~e~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~  171 (342)
T cd07854          95 QEYMETDLANVLE---QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSH  171 (342)
T ss_pred             eecccccHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcccceecCCcccc
Confidence            6899999988884   457999999999999999999999999999999999999975 457899999998765322111


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc--------------
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ--------------  145 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~--------------  145 (503)
                      ........++..|+|||.+.+.  ..++.++|+|||||++|+|++|+.||......+....+....              
T Consensus       172 ~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (342)
T cd07854         172 KGYLSEGLVTKWYRSPRLLLSP--NNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNV  249 (342)
T ss_pred             ccccccccccccccCHHHHhCc--cccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhh
Confidence            1112234578899999987532  257789999999999999999999998766554443332211              


Q ss_pred             ---------CCC-----CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          146 ---------EIP-----PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       146 ---------~~~-----~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                               ...     .....++.++.+||.+||..||.+|||+.++++      ++|+..
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~------h~~~~~  305 (342)
T cd07854         250 IPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM------HPYMSC  305 (342)
T ss_pred             hhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC------CCcccc
Confidence                     000     012357889999999999999999999999998      888764

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.94  E-value=7.4e-26  Score=231.72  Aligned_cols=182  Identities=20%  Similarity=0.299  Sum_probs=144.0

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC-
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP-   79 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~-   79 (503)
                      |||++|+|.+++.  ....+++..+..++.||+.||+|||+++|+||||||+||+++.++.++|+|||++......... 
T Consensus        87 ~e~~~~~l~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~  164 (334)
T cd07855          87 MDLMESDLHHIIH--SDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEH  164 (334)
T ss_pred             EehhhhhHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcCC
Confidence            6899999999886  4566999999999999999999999999999999999999999999999999998765432211 


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccC-------------
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-------------  146 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~-------------  146 (503)
                      ........++..|+|||.+.+.  ..++.++|+||||+++|+|++|+.||.+.+.......+.....             
T Consensus       165 ~~~~~~~~~~~~y~~PE~~~~~--~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  242 (334)
T cd07855         165 KYFMTEYVATRWYRAPELLLSL--PEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSD  242 (334)
T ss_pred             CcccccccccccccChHHhcCC--cccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchh
Confidence            1112345788999999998642  2478899999999999999999999987665443322221100             


Q ss_pred             -----------CCCC-----CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          147 -----------IPPI-----PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       147 -----------~~~~-----~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                                 ....     ....+.++.++|.+||+.+|++||++.+++.      ++|+.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~------~~~~~  298 (334)
T cd07855         243 RVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ------HPFLA  298 (334)
T ss_pred             hHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh------Chhhh
Confidence                       0111     1456899999999999999999999999998      77665

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.94  E-value=6.1e-26  Score=225.39  Aligned_cols=171  Identities=22%  Similarity=0.368  Sum_probs=143.1

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.   ..++++.++..++.|++.||+|||+++++|+||+|+||+++.++.++|+|||++.......  
T Consensus        81 ~e~~~~~~L~~~i~---~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~--  155 (277)
T cd06640          81 MEYLGGGSALDLLR---AGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--  155 (277)
T ss_pred             EecCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCc--
Confidence            689985 8998884   3578999999999999999999999999999999999999999999999999987654321  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                       .......++..|+|||.+.+.   .++.++|+||||+++|+|++|..||...........+. ....+..+..++..+.
T Consensus       156 -~~~~~~~~~~~y~apE~~~~~---~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  230 (277)
T cd06640         156 -IKRNTFVGTPFWMAPEVIQQS---AYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIP-KNNPPTLTGEFSKPFK  230 (277)
T ss_pred             -cccccccCcccccCHhHhccC---CCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhh-cCCCCCCchhhhHHHH
Confidence             122334678899999998743   57889999999999999999999998777665554432 2334555667889999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 010713          160 NVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ++|.+||+.+|++||++.++++
T Consensus       231 ~li~~~l~~~p~~Rp~~~~il~  252 (277)
T cd06640         231 EFIDACLNKDPSFRPTAKELLK  252 (277)
T ss_pred             HHHHHHcccCcccCcCHHHHHh
Confidence            9999999999999999999988

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.94  E-value=8.5e-26  Score=225.42  Aligned_cols=175  Identities=24%  Similarity=0.383  Sum_probs=135.3

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++++|.+++.. ....+++..+..++.|+++||.|||+++|+|+||||+||+++.++.++|+|||++......   .
T Consensus        82 ~e~~~~~L~~~~~~-~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~---~  157 (291)
T cd07844          82 FEYLDTDLKQYMDD-CGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVP---S  157 (291)
T ss_pred             EecCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCC---C
Confidence            79999999998875 3457899999999999999999999999999999999999999999999999988653221   1


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHhccCCC-----------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVVRRQEIP-----------  148 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~-~~e~~~~i~~~~~~~-----------  148 (503)
                      .......++..|+|||++.+.  ..++.++|+||||+++|+|++|..||.+.. ..+....+......+           
T Consensus       158 ~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (291)
T cd07844         158 KTYSNEVVTLWYRPPDVLLGS--TEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSN  235 (291)
T ss_pred             ccccccccccccCCcHHhhcC--cccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhc
Confidence            112233567899999998642  247889999999999999999999997654 222222221100000           


Q ss_pred             -----------------CCCCCCc--HHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          149 -----------------PIPSGLP--PAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       149 -----------------~~~~~~s--~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                                       .....++  ..+.++|.+||+.+|++||++.++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         236 PEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             cccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence                             0001234  78899999999999999999999987

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.94  E-value=7.8e-26  Score=223.61  Aligned_cols=175  Identities=23%  Similarity=0.296  Sum_probs=142.3

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++++|.+.+.. ....+++.++..++.|++.||+|||+++|+|+||||+||+++.++.++|+|||.+.......   
T Consensus        77 ~e~~~~~l~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~---  152 (283)
T cd05118          77 FEFMDTDLYKLIKD-RQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV---  152 (283)
T ss_pred             EeccCCCHHHHHHh-hcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc---
Confidence            68999999998875 34689999999999999999999999999999999999999999999999999987664321   


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------  148 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~------------  148 (503)
                      .......++..|+|||.+.+.  ..++.++|+||||+++|+|++|+.||...+..+....+......+            
T Consensus       153 ~~~~~~~~~~~~~~PE~~~~~--~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (283)
T cd05118         153 RPYTHYVVTRWYRAPELLLGD--KGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLA  230 (283)
T ss_pred             ccccCccCcccccCcHHHhcC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhh
Confidence            122334678899999998743  257889999999999999999999998877655544443221110            


Q ss_pred             ----------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          149 ----------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       149 ----------------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                                      .....++.++.++|.+||+.||.+||++.+++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         231 RNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             hhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence                            012346789999999999999999999999998

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.94  E-value=8.2e-26  Score=219.11  Aligned_cols=174  Identities=27%  Similarity=0.528  Sum_probs=148.4

Q ss_pred             CcCCCC-CHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCC
Q 010713            1 MKFYEG-SVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~--~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~   77 (503)
                      |||++| +|.+++....  ...+++.++..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||.+.......
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~  157 (258)
T cd08215          78 MEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV  157 (258)
T ss_pred             EEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence            688985 9999997643  4789999999999999999999999999999999999999999999999999987654321


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHH
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA  157 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~  157 (503)
                         .......+++.|+|||.+.+.   .++.++|+||+|+++|+|++|..||......+........ ....++..++..
T Consensus       158 ---~~~~~~~~~~~y~~pe~~~~~---~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  230 (258)
T cd08215         158 ---DLAKTVVGTPYYLSPELCQNK---PYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKG-QYPPIPSQYSSE  230 (258)
T ss_pred             ---ceecceeeeecccChhHhccC---CCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcC-CCCCCCCCCCHH
Confidence               122345688899999998744   5788999999999999999999999888777666665543 355567789999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          158 VENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +.+++.+||..+|++||++.++++
T Consensus       231 ~~~~i~~~l~~~p~~Rp~~~~ll~  254 (258)
T cd08215         231 LRNLVSSLLQKDPEERPSIAQILQ  254 (258)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHhc
Confidence            999999999999999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.94  E-value=8.4e-26  Score=225.18  Aligned_cols=183  Identities=22%  Similarity=0.330  Sum_probs=146.7

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ ++|.+++.... ..++..++..++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||++.......  
T Consensus        94 ~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~--  170 (286)
T cd06614          94 MEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK--  170 (286)
T ss_pred             EeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccch--
Confidence            68999 59999997532 479999999999999999999999999999999999999999999999999876543211  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC-CCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP-PIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~-~~~~~~s~~l  158 (503)
                       .......++..|+|||.+.+.   .++.++|+||||+++|+|++|..||...+.......+....... ..+..++..+
T Consensus       171 -~~~~~~~~~~~y~~PE~~~~~---~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  246 (286)
T cd06614         171 -SKRNSVVGTPYWMAPEVIKRK---DYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEF  246 (286)
T ss_pred             -hhhccccCCcccCCHhHhcCC---CCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHH
Confidence             122334578899999998743   57889999999999999999999998877665554443322211 1223488999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCC
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGW  196 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w  196 (503)
                      .++|.+||+.+|.+||++.++++      ++++....|
T Consensus       247 ~~li~~~l~~~p~~Rpt~~~il~------~~~~~~~~~  278 (286)
T cd06614         247 KDFLNKCLVKDPEKRPSAEELLQ------HPFLKKACP  278 (286)
T ss_pred             HHHHHHHhccChhhCcCHHHHhh------ChHhhccCc
Confidence            99999999999999999999998      666555333

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.93  E-value=7.3e-26  Score=226.48  Aligned_cols=182  Identities=20%  Similarity=0.237  Sum_probs=143.1

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEcc-CCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE-ADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~-~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++++|.+.+.......+++..+..++.||+.||+|||+++++|+||+|+||+++. ++.+||+|||++......   
T Consensus        80 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~---  156 (294)
T PLN00009         80 FEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP---  156 (294)
T ss_pred             EecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCC---
Confidence            7899999999887544455788999999999999999999999999999999999985 457999999998654321   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC-----------
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP-----------  148 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~-----------  148 (503)
                      ........+++.|+|||.+.+.  ..++.++|+||||+++|+|++|..||......+....+......+           
T Consensus       157 ~~~~~~~~~~~~y~~PE~~~~~--~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (294)
T PLN00009        157 VRTFTHEVVTLWYRAPEILLGS--RHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSL  234 (294)
T ss_pred             ccccccCceeecccCHHHHhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccc
Confidence            1122344678899999988642  257889999999999999999999998776655554443211100           


Q ss_pred             --------C--------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          149 --------P--------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       149 --------~--------~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                              .        ....+++.+.+++.+||+.+|++||++.++++      ++|+.+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~------~~~~~~  289 (294)
T PLN00009        235 PDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE------HEYFKD  289 (294)
T ss_pred             hhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc------CchHhH
Confidence                    0        12356888999999999999999999999998      666654

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.93  E-value=6.7e-26  Score=221.50  Aligned_cols=172  Identities=25%  Similarity=0.485  Sum_probs=143.7

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecccCCCcEEEccCCcEEEEecCCcccccCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs-~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~   78 (503)
                      |||++ ++|.+++..  ...+++..++.++.|++.||+|||+ ++++|+||+|+||+++.++.++|+|||++....... 
T Consensus        78 ~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~-  154 (264)
T cd06623          78 LEYMDGGSLADLLKK--VGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL-  154 (264)
T ss_pred             EEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCC-
Confidence            68999 599999974  3779999999999999999999999 999999999999999999999999999987654321 


Q ss_pred             CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCC---ChHHHHHHHHhccCCCCCCCC-C
Q 010713           79 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR---SVDEIYDAVVRRQEIPPIPSG-L  154 (503)
Q Consensus        79 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~---~~~e~~~~i~~~~~~~~~~~~-~  154 (503)
                        .......++..|+|||.+...   .++.++|+||||+++|+|++|..||...   ...+....+. ....+..+.. +
T Consensus       155 --~~~~~~~~~~~y~~pE~~~~~---~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  228 (264)
T cd06623         155 --DQCNTFVGTVTYMSPERIQGE---SYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC-DGPPPSLPAEEF  228 (264)
T ss_pred             --CcccceeecccccCHhhhCCC---CCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh-cCCCCCCCcccC
Confidence              111245678899999998744   6788999999999999999999999876   3444444443 3334445555 8


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +..+.++|.+||..+|++||++.++++
T Consensus       229 ~~~l~~li~~~l~~~p~~R~~~~~ll~  255 (264)
T cd06623         229 SPEFRDFISACLQKDPKKRPSAAELLQ  255 (264)
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHHh
Confidence            999999999999999999999999998

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.93  E-value=8.7e-26  Score=224.79  Aligned_cols=173  Identities=22%  Similarity=0.338  Sum_probs=136.2

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|..+      ..+++..+..++.|++.||+|||++||+|+||||+||+++.++.++|+|||++.....    
T Consensus        78 ~e~~~~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~----  147 (279)
T cd06619          78 TEFMDGGSLDVY------RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVN----  147 (279)
T ss_pred             EecCCCCChHHh------hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccc----
Confidence            689986 55332      3478999999999999999999999999999999999999999999999999876532    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCh-------HHHHHHHHhccCCCCCCC
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV-------DEIYDAVVRRQEIPPIPS  152 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-------~e~~~~i~~~~~~~~~~~  152 (503)
                       .......++..|+|||++.+.   .++.++|+||||+++|+|++|..||.....       .+....+...........
T Consensus       148 -~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (279)
T cd06619         148 -SIAKTYVGTNAYMAPERISGE---QYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVG  223 (279)
T ss_pred             -ccccCCCCChhhcCceeecCC---CCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCC
Confidence             123345789999999999754   578899999999999999999999965321       122222222111111234


Q ss_pred             CCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          153 GLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       153 ~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      ..++++.++|.+||+.+|++||++.++++      ++|+..
T Consensus       224 ~~~~~~~~li~~~l~~~P~~Rp~~~eil~------~~~~~~  258 (279)
T cd06619         224 QFSEKFVHFITQCMRKQPKERPAPENLMD------HPFIVQ  258 (279)
T ss_pred             cCCHHHHHHHHHHhhCChhhCCCHHHHhc------Cccccc
Confidence            57889999999999999999999999998      666543

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.93  E-value=3.6e-26  Score=230.23  Aligned_cols=177  Identities=21%  Similarity=0.298  Sum_probs=143.2

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.   ...+++.++..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++......   
T Consensus        95 ~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~---  168 (297)
T cd06656          95 MEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE---  168 (297)
T ss_pred             ecccCCCCHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCC---
Confidence            789985 8988884   356899999999999999999999999999999999999999999999999998654321   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-cCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR-QEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~-~~~~~~~~~~s~~l  158 (503)
                      ........+++.|+|||.+.+.   .++.++|+||||+++|+|++|..||...+.......+... ......+..++..+
T Consensus       169 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (297)
T cd06656         169 QSKRSTMVGTPYWMAPEVVTRK---AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVF  245 (297)
T ss_pred             ccCcCcccCCccccCHHHHcCC---CCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHH
Confidence            1122345688899999998743   5788999999999999999999999876554333222221 12223456788999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      .+++.+||..+|++||++.++++      ++|+.
T Consensus       246 ~~li~~~l~~~p~~Rps~~~il~------~~~~~  273 (297)
T cd06656         246 RDFLNRCLEMDVDRRGSAKELLQ------HPFLK  273 (297)
T ss_pred             HHHHHHHccCChhhCcCHHHHhc------Cchhc
Confidence            99999999999999999999999      66654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.93  E-value=6.4e-26  Score=224.98  Aligned_cols=171  Identities=23%  Similarity=0.389  Sum_probs=141.7

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.   ...+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++.......  
T Consensus        81 ~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~--  155 (277)
T cd06642          81 MEYLGGGSALDLLK---PGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--  155 (277)
T ss_pred             EEccCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcc--
Confidence            689985 8888874   4678999999999999999999999999999999999999999999999999987653311  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                       .......++..|+|||++.+.   .++.++|+||||+++|+|++|..||...........+.. ...+..+..++..+.
T Consensus       156 -~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  230 (277)
T cd06642         156 -IKRNTFVGTPFWMAPEVIKQS---AYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPK-NSPPTLEGQYSKPFK  230 (277)
T ss_pred             -hhhhcccCcccccCHHHhCcC---CCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhc-CCCCCCCcccCHHHH
Confidence             112234678899999999754   578899999999999999999999987665554443322 233445567889999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 010713          160 NVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ++|.+||+.+|++||++.++++
T Consensus       231 ~li~~~l~~~p~~Rp~~~~il~  252 (277)
T cd06642         231 EFVEACLNKDPRFRPTAKELLK  252 (277)
T ss_pred             HHHHHHccCCcccCcCHHHHHH
Confidence            9999999999999999999998

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.93  E-value=4.7e-26  Score=223.34  Aligned_cols=176  Identities=27%  Similarity=0.479  Sum_probs=142.6

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecccCCCcEEEccCCcEEEEecCCcccccCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs-~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~   78 (503)
                      |||++ ++|.+++... ...+++..+..++.|++.||+|||+ .+++|+||||+||+++.++.++|+|||.+......  
T Consensus        78 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~--  154 (265)
T cd06605          78 MEYMDGGSLDKILKEV-QGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS--  154 (265)
T ss_pred             EEecCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHH--
Confidence            68899 5999998753 3789999999999999999999999 99999999999999999999999999988655321  


Q ss_pred             CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCC-----ChHHHHHHHHhccCCCCCCCC
Q 010713           79 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR-----SVDEIYDAVVRRQEIPPIPSG  153 (503)
Q Consensus        79 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~-----~~~e~~~~i~~~~~~~~~~~~  153 (503)
                         ......++..|+|||.+.+.   .++.++|+||||+++|+|++|..||...     ...+....+.. ...+..+..
T Consensus       155 ---~~~~~~~~~~y~~PE~~~~~---~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  227 (265)
T cd06605         155 ---LAKTFVGTSSYMAPERIQGN---DYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVN-EPPPRLPSG  227 (265)
T ss_pred             ---HhhcccCChhccCHHHHcCC---CCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhc-CCCCCCChh
Confidence               11126688899999998754   6789999999999999999999999754     22233333332 233334444


Q ss_pred             -CcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          154 -LPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       154 -~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                       ++.++.++|.+||..||++|||+.+++.      ++|+.
T Consensus       228 ~~~~~~~~li~~~l~~~p~~Rpt~~~ll~------~~~~~  261 (265)
T cd06605         228 KFSPDFQDFVNLCLIKDPRERPSYKELLE------HPFIK  261 (265)
T ss_pred             hcCHHHHHHHHHHcCCCchhCcCHHHHhh------Cchhh
Confidence             8899999999999999999999999998      66653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.93  E-value=1.5e-25  Score=222.47  Aligned_cols=176  Identities=24%  Similarity=0.349  Sum_probs=139.0

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||+++++.+.+.. ....+++.++..++.||+.||+|||+++++|+||+|+||+++.++.++|+|||++........  
T Consensus        79 ~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~--  155 (288)
T cd07833          79 FEYVERTLLELLEA-SPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA--  155 (288)
T ss_pred             EecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc--
Confidence            68999877666553 446699999999999999999999999999999999999999999999999999877644221  


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccC--------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE--------------  146 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~--------------  146 (503)
                      .......++..|+|||++.+.  ..++.++|+||||+++|+|++|..||.+....+....+.....              
T Consensus       156 ~~~~~~~~~~~~~~PE~~~~~--~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (288)
T cd07833         156 SPLTDYVATRWYRAPELLVGD--TNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNP  233 (288)
T ss_pred             ccccCcccccCCcCCchhcCC--CCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCc
Confidence            122345678899999998743  1578899999999999999999999987655443322221000              


Q ss_pred             ------CC----------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          147 ------IP----------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       147 ------~~----------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                            .+          ..+..++.++.+||.+||..+|++||++.++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         234 RFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             cccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence                  00          122345889999999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.93  E-value=8.7e-26  Score=228.61  Aligned_cols=176  Identities=22%  Similarity=0.403  Sum_probs=139.6

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecccCCCcEEEccCCcEEEEecCCcccccCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs-~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~   78 (503)
                      |||++| +|.+++.  ....+++..+..++.|++.||.|||+ .+++|+||||+||+++.++.++|+|||++.....   
T Consensus        78 ~ey~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---  152 (308)
T cd06615          78 MEHMDGGSLDQVLK--KAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---  152 (308)
T ss_pred             eeccCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccc---
Confidence            799985 9999987  34679999999999999999999997 5999999999999999999999999998865432   


Q ss_pred             CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--------------
Q 010713           79 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR--------------  144 (503)
Q Consensus        79 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~--------------  144 (503)
                        .......++..|+|||.+.+.   .++.++|+||||+++|+|++|..||...+...........              
T Consensus       153 --~~~~~~~~~~~~~aPE~~~~~---~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (308)
T cd06615         153 --SMANSFVGTRSYMSPERLQGT---HYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVS  227 (308)
T ss_pred             --cccccCCCCcCccChhHhcCC---CCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCccccc
Confidence              122345788999999998643   5788999999999999999999999755433322211100              


Q ss_pred             ---------------------cCCCCCC-CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          145 ---------------------QEIPPIP-SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       145 ---------------------~~~~~~~-~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                                           ...+..+ ..++.++.++|.+||..+|++||++.++++      ++|+.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~------~~~~~  291 (308)
T cd06615         228 GHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTK------HPFIK  291 (308)
T ss_pred             CCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhc------Chhhh
Confidence                                 0111111 236788999999999999999999999998      66654

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.93  E-value=1.3e-25  Score=216.40  Aligned_cols=172  Identities=24%  Similarity=0.405  Sum_probs=141.3

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ ++|.+++.. ....+++..+..++.|++.||++||++|++|+||+|+||+++.++.++|+|||.+........ 
T Consensus        76 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-  153 (253)
T cd05122          76 MEFCSGGSLKDLLKS-TNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-  153 (253)
T ss_pred             EecCCCCcHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc-
Confidence            68999 599998864 236799999999999999999999999999999999999999999999999998876543211 


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCC--CCCcHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGLPPA  157 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~--~~~s~~  157 (503)
                         .....++..|+|||.+.+.   .++.++|+||||+++|+|++|..||...+..+....... ...+..+  ..++..
T Consensus       154 ---~~~~~~~~~~~~PE~~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  226 (253)
T cd05122         154 ---RNTMVGTPYWMAPEVINGK---PYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT-NGPPGLRNPEKWSDE  226 (253)
T ss_pred             ---ccceecCCcccCHHHHcCC---CCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh-cCCCCcCcccccCHH
Confidence               3355688899999998754   478899999999999999999999987755544444333 2222333  334899


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          158 VENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +.++|.+||+.||++|||+.++++
T Consensus       227 ~~~~i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         227 FKDFLKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             HHHHHHHHccCChhhCCCHHHHhc
Confidence            999999999999999999999987

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.93  E-value=8.9e-26  Score=221.74  Aligned_cols=176  Identities=26%  Similarity=0.444  Sum_probs=141.2

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC-cEEEEecCCcccccCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD-RAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~-~vKL~DFGla~~~~~~~~   78 (503)
                      |||++| +|.+++.  ....+++..+..++.||+.||+|||++|++|+||+|+||+++.++ .++|+|||.+........
T Consensus        82 ~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~  159 (268)
T cd06630          82 VEWMAGGSVSHLLS--KYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGT  159 (268)
T ss_pred             EeccCCCcHHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccc
Confidence            688885 8999886  346789999999999999999999999999999999999998776 599999999876543211


Q ss_pred             C-CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHhccCCCCCCCCC
Q 010713           79 P-SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE---IYDAVVRRQEIPPIPSGL  154 (503)
Q Consensus        79 ~-~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e---~~~~i~~~~~~~~~~~~~  154 (503)
                      . ........++..|+|||.+.+.   .++.++|+||||+++|+|++|..||.......   ....+......+..+..+
T Consensus       160 ~~~~~~~~~~~~~~~~~PE~~~~~---~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (268)
T cd06630         160 GAGEFQGQLLGTIAFMAPEVLRGE---QYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHL  236 (268)
T ss_pred             cCCccccccccccceeCHhHhccC---CCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhh
Confidence            1 1112234678899999998743   57889999999999999999999997544322   222222233455667788


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ++++.+++.+||..+|++||++.++++
T Consensus       237 ~~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         237 SPGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             CHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence            999999999999999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.93  E-value=7.2e-26  Score=232.30  Aligned_cols=180  Identities=17%  Similarity=0.208  Sum_probs=143.3

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++++|.+++.  ..+.+++..+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||++.......   
T Consensus        88 ~e~~~~~L~~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~---  162 (337)
T cd07858          88 YELMDTDLHQIIR--SSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG---  162 (337)
T ss_pred             EeCCCCCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCc---
Confidence            6899999999886  45679999999999999999999999999999999999999999999999999987653311   


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccC--------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE--------------  146 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~--------------  146 (503)
                      .......++..|+|||.+.+.  ..++.++|+|||||++|+|++|+.||.+.+.......+.....              
T Consensus       163 ~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (337)
T cd07858         163 DFMTEYVVTRWYRAPELLLNC--SEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEK  240 (337)
T ss_pred             ccccccccccCccChHHHhcC--CCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchh
Confidence            222345678899999988642  2478899999999999999999999987654333322211000              


Q ss_pred             ------------C---CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          147 ------------I---PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       147 ------------~---~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                                  .   ......+++++.++|.+||+.+|++|||+.++++      ++|+..
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~------h~~~~~  296 (337)
T cd07858         241 ARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALA------HPYLAS  296 (337)
T ss_pred             hhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHc------Ccchhh
Confidence                        0   0112467899999999999999999999999999      666643

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.93  E-value=1.1e-25  Score=223.35  Aligned_cols=175  Identities=24%  Similarity=0.322  Sum_probs=136.7

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||+++++.+.+.. ....+++.+++.++.||+.||+|||+.+++|+||+|+||++++++.++|+|||++.......   
T Consensus        79 ~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~---  154 (286)
T cd07846          79 FEFVDHTVLDDLEK-YPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG---  154 (286)
T ss_pred             EecCCccHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc---
Confidence            68999754444432 34569999999999999999999999999999999999999999999999999987653321   


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC-------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-------------  147 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~-------------  147 (503)
                      .......++..|+|||++.+.  ..++.++|+||||+++|+|++|.+||......+....+......             
T Consensus       155 ~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (286)
T cd07846         155 EVYTDYVATRWYRAPELLVGD--TKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNP  232 (286)
T ss_pred             cccCcccceeeccCcHHhccc--cccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccch
Confidence            222345678899999998643  24678899999999999999999999876654433333211000             


Q ss_pred             -------C---------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          148 -------P---------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       148 -------~---------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                             +         .....++..+.+|+.+||+.+|++||++.++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         233 LFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             HhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence                   0         012357889999999999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.93  E-value=1.2e-25  Score=225.54  Aligned_cols=175  Identities=22%  Similarity=0.433  Sum_probs=139.5

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs-~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++++|.+++.. ....+++..+..++.|++.||+|||+ .||+||||+|+||+++.++.++|+|||++......   
T Consensus        93 ~e~~~~~l~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~---  168 (296)
T cd06618          93 MELMSTCLDKLLKR-IQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDS---  168 (296)
T ss_pred             eeccCcCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCC---
Confidence            68888888888765 34589999999999999999999997 59999999999999999999999999998765321   


Q ss_pred             CCCCCCccCCCCCCCccccCCCC-CCCCCCccchHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHhccCCCCCC--CCCc
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEV-RGPISFETDSWGFACSIIEMLTGVQPRCGRSV-DEIYDAVVRRQEIPPIP--SGLP  155 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~-~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-~e~~~~i~~~~~~~~~~--~~~s  155 (503)
                       .......++..|+|||.+.+.. .+.++.++|+||||+++|+|++|..||..... .+....+.... .+..+  ..++
T Consensus       169 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  246 (296)
T cd06618         169 -KAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEE-PPSLPPNEGFS  246 (296)
T ss_pred             -CcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCC-CCCCCCCCCCC
Confidence             1122335778999999987542 24578899999999999999999999976433 23333333322 22222  3478


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          156 PAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      .++.+||.+||..||++||++.++++
T Consensus       247 ~~l~~li~~~l~~~p~~Rp~~~~il~  272 (296)
T cd06618         247 PDFCSFVDLCLTKDHRKRPKYRELLQ  272 (296)
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHhc
Confidence            99999999999999999999999998

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.93  E-value=1e-25  Score=223.45  Aligned_cols=176  Identities=21%  Similarity=0.292  Sum_probs=141.2

Q ss_pred             CcCCCCCHHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEGSVGDRMAQLK-GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~-~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++|+|.+++.... ...+++.++..++.|++.||+|||++|++|+||||+||++++++.++|+|||++......   
T Consensus        77 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~---  153 (284)
T cd07836          77 FEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIP---  153 (284)
T ss_pred             EecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCC---
Confidence            7899999999887533 356899999999999999999999999999999999999999999999999998654321   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC-----------
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP-----------  148 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~-----------  148 (503)
                      ........++..|++||++.+.  ..++.++|+||||+++|+|++|..||.+.+..+....+......+           
T Consensus       154 ~~~~~~~~~~~~y~~PE~~~~~--~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
T cd07836         154 VNTFSNEVVTLWYRAPDVLLGS--RTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQL  231 (284)
T ss_pred             ccccccccccccccChHHhcCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcC
Confidence            1122344578899999998643  246789999999999999999999998877665555443211100           


Q ss_pred             -----C-----------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          149 -----P-----------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       149 -----~-----------~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                           .           +...++..+.++|.+||+.||.+||++.++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         232 PEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             chhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                 0           11245788999999999999999999999987

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.93  E-value=1.2e-25  Score=225.61  Aligned_cols=178  Identities=22%  Similarity=0.291  Sum_probs=139.9

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++++|.+.+.. ....+++.++..++.||++||+|||++||+|+||||+||++++++.++|+|||++..........
T Consensus        94 ~~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~  172 (311)
T cd07866          94 TPYMDHDLSGLLEN-PSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNP  172 (311)
T ss_pred             EecCCcCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhccCCCccc
Confidence            68888888888864 35579999999999999999999999999999999999999999999999999987654322111


Q ss_pred             --------CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC---
Q 010713           81 --------SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP---  149 (503)
Q Consensus        81 --------~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~---  149 (503)
                              .......+++.|+|||.+.+.  ..++.++|+|||||++|+|++|.+||.+.+.......+......+.   
T Consensus       173 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (311)
T cd07866         173 KGGGGGGTRKYTNLVVTRWYRPPELLLGE--RRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEET  250 (311)
T ss_pred             ccCCcccccccccceeccCcCChHHhhCC--CccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence                    111234567889999988643  2478899999999999999999999988776655554433211100   


Q ss_pred             ------------------C-------CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          150 ------------------I-------PSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       150 ------------------~-------~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                                        .       ...+++.+.++|.+||+.||.+|||+.+++.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         251 WPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             chhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence                              0       0234578899999999999999999999987

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.93  E-value=1.2e-25  Score=223.98  Aligned_cols=170  Identities=21%  Similarity=0.322  Sum_probs=135.7

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC-------cEEEEecCCccc
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD-------RAVLGDVGIPHL   72 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~-------~vKL~DFGla~~   72 (503)
                      |||++| +|.+++.. ..+.+++..+..++.||+.||+|||+++|+||||||+||+++..+       .++++|||++..
T Consensus        95 ~ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~  173 (274)
T cd05076          95 EEFVEHGPLDVCLRK-EKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFT  173 (274)
T ss_pred             EecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCccccc
Confidence            799995 78777753 456799999999999999999999999999999999999997643       479999998754


Q ss_pred             ccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHhccCCCCCC
Q 010713           73 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEML-TGVQPRCGRSVDEIYDAVVRRQEIPPIP  151 (503)
Q Consensus        73 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLl-tG~~Pf~~~~~~e~~~~i~~~~~~~~~~  151 (503)
                      ...       .....++..|+|||.+.+.  ..++.++|+||||+++|+|+ +|..||......+.......   ....+
T Consensus       174 ~~~-------~~~~~~~~~~~aPe~~~~~--~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~---~~~~~  241 (274)
T cd05076         174 ALS-------REERVERIPWIAPECVPGG--NSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFYEK---KHRLP  241 (274)
T ss_pred             ccc-------ccccccCCcccCchhhcCC--CCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHHHh---ccCCC
Confidence            321       1233567889999988642  35788999999999999995 69999987765554332221   22344


Q ss_pred             CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHH
Q 010713          152 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVF  183 (503)
Q Consensus       152 ~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L  183 (503)
                      ...++.+.++|.+||+.+|++|||+.++++.|
T Consensus       242 ~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L  273 (274)
T cd05076         242 EPSCKELATLISQCLTYEPTQRPSFRTILRDL  273 (274)
T ss_pred             CCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence            55678899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.93  E-value=1.5e-25  Score=218.58  Aligned_cols=174  Identities=25%  Similarity=0.474  Sum_probs=143.7

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC-cEEEEecCCcccccCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD-RAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~-~vKL~DFGla~~~~~~~~   78 (503)
                      |||+.| +|.+++.......+++..+..++.|++.||+|||+++++|+||||+||++++++ .++|+|||.+......  
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~--  155 (257)
T cd08225          78 MEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS--  155 (257)
T ss_pred             EecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCC--
Confidence            688975 999999765555689999999999999999999999999999999999998886 4699999988765331  


Q ss_pred             CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           79 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        79 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                       ........|++.|+|||++.+.   .++.++|+||||+++|+|++|..||...+..+....+... ........++..+
T Consensus       156 -~~~~~~~~~~~~~~ape~~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  230 (257)
T cd08225         156 -MELAYTCVGTPYYLSPEICQNR---PYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQG-YFAPISPNFSRDL  230 (257)
T ss_pred             -cccccccCCCccccCHHHHcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc-cCCCCCCCCCHHH
Confidence             1122234688899999998743   5788999999999999999999999887766665554432 3334556788999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHH
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      .++|.+||..+|++|||+.++++
T Consensus       231 ~~~i~~~l~~~p~~Rpt~~~ll~  253 (257)
T cd08225         231 RSLISQLFKVSPRDRPSITSILK  253 (257)
T ss_pred             HHHHHHHhccChhhCcCHHHHhh
Confidence            99999999999999999999988

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.93  E-value=9.2e-26  Score=232.25  Aligned_cols=176  Identities=21%  Similarity=0.268  Sum_probs=144.5

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++++|.+++.   ...+++.++..++.||+.||+|||++||+|+||||+||+++.++.++|+|||++.....     
T Consensus        99 ~e~~~~~L~~~~~---~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~-----  170 (343)
T cd07851          99 THLMGADLNNIVK---CQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDD-----  170 (343)
T ss_pred             EecCCCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEccccccccccc-----
Confidence            5788889999885   35799999999999999999999999999999999999999999999999999876532     


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------  148 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~------------  148 (503)
                       ......++..|+|||.+.+.  ..++.++|+||||+++|+|++|+.||.+....+.+..+......+            
T Consensus       171 -~~~~~~~~~~y~aPE~~~~~--~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  247 (343)
T cd07851         171 -EMTGYVATRWYRAPEIMLNW--MHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSES  247 (343)
T ss_pred             -cccCCcccccccCHHHHhCC--CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchh
Confidence             12345678899999998643  257889999999999999999999998877666555543321111            


Q ss_pred             -----------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          149 -----------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       149 -----------------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                                       .....+++.+.++|.+||+.||++|||+.++++      ++|+..
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~------h~~~~~  303 (343)
T cd07851         248 ARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA------HPYLAE  303 (343)
T ss_pred             HHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc------CCCccc
Confidence                             011346889999999999999999999999998      787764

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.93  E-value=1.8e-25  Score=228.67  Aligned_cols=177  Identities=18%  Similarity=0.252  Sum_probs=140.6

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC-
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP-   79 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~-   79 (503)
                      |||++++|.+.+.  ....+++.+++.++.||+.||+|||++||+||||||+||+++.++.++|+|||++......... 
T Consensus        85 ~e~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~  162 (332)
T cd07857          85 EELMEADLHQIIR--SGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGEN  162 (332)
T ss_pred             EecccCCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccccc
Confidence            5788889999886  4567999999999999999999999999999999999999999999999999999765432211 


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccC-------------
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-------------  146 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~-------------  146 (503)
                      ........|+..|+|||.+.+.  ..++.++|+||||+++|+|++|..||...+.......+.....             
T Consensus       163 ~~~~~~~~g~~~y~aPE~~~~~--~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (332)
T cd07857         163 AGFMTEYVATRWYRAPEIMLSF--QSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSP  240 (332)
T ss_pred             cccccCcccCccccCcHHHhCC--CCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhh
Confidence            1122345789999999987542  2578899999999999999999999987665444333222110             


Q ss_pred             -------------CC---CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          147 -------------IP---PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       147 -------------~~---~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                                   ..   .....++..+.+++.+||+.||.+|||+.+++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~  291 (332)
T cd07857         241 KAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE  291 (332)
T ss_pred             hHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence                         00   112346789999999999999999999999987

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.93  E-value=5.9e-26  Score=221.16  Aligned_cols=159  Identities=18%  Similarity=0.212  Sum_probs=129.9

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++..  ...+++.++..++.|++.||+|||++||+||||||+||+++.++.++++|||.+.....    
T Consensus        64 ~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~----  137 (237)
T cd05576          64 LQHAEGGKLWSHISK--FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVED----  137 (237)
T ss_pred             EecCCCCCHHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhcccc----
Confidence            789985 99999863  45699999999999999999999999999999999999999999999999998755432    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                        ......++..|+|||.+...   .++.++|+||+|+++|+|++|..|+......      ........++..+++.++
T Consensus       138 --~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslG~il~el~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~  206 (237)
T cd05576         138 --SCDGEAVENMYCAPEVGGIS---EETEACDWWSLGAILFELLTGKTLVECHPSG------INTHTTLNIPEWVSEEAR  206 (237)
T ss_pred             --ccccCCcCccccCCcccCCC---CCCchhhHHHHHHHHHHHHHCcchhhcCchh------cccccccCCcccCCHHHH
Confidence              12233456789999998643   5788999999999999999999887543211      111122345677899999


Q ss_pred             HHHHHhhhcCCCCCCCH
Q 010713          160 NVLLGCFEYDLRSRPLM  176 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~  176 (503)
                      ++|.+||+.||++||++
T Consensus       207 ~li~~~l~~dp~~R~~~  223 (237)
T cd05576         207 SLLQQLLQFNPTERLGA  223 (237)
T ss_pred             HHHHHHccCCHHHhcCC
Confidence            99999999999999986

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.93  E-value=4.2e-26  Score=243.11  Aligned_cols=169  Identities=22%  Similarity=0.265  Sum_probs=139.9

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEE-ccCCcEEEEecCCcccccCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL-NEADRAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILl-d~~~~vKL~DFGla~~~~~~~~   78 (503)
                      ||+++| -|.+.+.   ..+....++..|+.+|+.|+.|||++|++||||||+|||+ +..++++|+|||.++.....  
T Consensus       395 ~e~l~g~ell~ri~---~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~--  469 (612)
T KOG0603|consen  395 MELLDGGELLRRIR---SKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS--  469 (612)
T ss_pred             ehhccccHHHHHHH---hcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh--
Confidence            678886 4555553   2333337888999999999999999999999999999999 58899999999999876431  


Q ss_pred             CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhccCCCCCCCCCcHH
Q 010713           79 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD-EIYDAVVRRQEIPPIPSGLPPA  157 (503)
Q Consensus        79 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-e~~~~i~~~~~~~~~~~~~s~~  157 (503)
                          ..+.+-|..|.|||++...   .|+.++|+||||++||+|++|+.||...... ++...+    ..+.+...+|..
T Consensus       470 ----~~tp~~t~~y~APEvl~~~---~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i----~~~~~s~~vS~~  538 (612)
T KOG0603|consen  470 ----CDTPALTLQYVAPEVLAIQ---EYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRI----QMPKFSECVSDE  538 (612)
T ss_pred             ----hcccchhhcccChhhhccC---CCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhh----cCCccccccCHH
Confidence                3345668899999999843   7999999999999999999999999876655 444333    445556889999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcC
Q 010713          158 VENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVH  191 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~  191 (503)
                      .++||.+||+.||.+||++.++..      ++|+
T Consensus       539 AKdLl~~LL~~dP~~Rl~~~~i~~------h~w~  566 (612)
T KOG0603|consen  539 AKDLLQQLLQVDPALRLGADEIGA------HPWF  566 (612)
T ss_pred             HHHHHHHhccCChhhCcChhhhcc------Ccch
Confidence            999999999999999999999998      7766

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.93  E-value=1.8e-25  Score=223.30  Aligned_cols=175  Identities=25%  Similarity=0.306  Sum_probs=134.6

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++++|.+.+.. ....+++.++..++.|++.||+|||++||+|+||||+||+++.++.++|+|||++......   .
T Consensus        82 ~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~---~  157 (291)
T cd07870          82 FEYMHTDLAQYMIQ-HPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIP---S  157 (291)
T ss_pred             EecccCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCC---C
Confidence            68999999888764 3456889999999999999999999999999999999999999999999999998654321   1


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhccCC------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD-EIYDAVVRRQEI------------  147 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-e~~~~i~~~~~~------------  147 (503)
                      .......+++.|+|||.+.+.  ..++.++|+||||+++|+|++|..||...... +....+......            
T Consensus       158 ~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (291)
T cd07870         158 QTYSSEVVTLWYRPPDVLLGA--TDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKL  235 (291)
T ss_pred             CCCCCccccccccCCceeecC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhc
Confidence            122344578899999998642  24678899999999999999999999765432 222222110000            


Q ss_pred             C---------CCC---------CCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          148 P---------PIP---------SGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       148 ~---------~~~---------~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +         ..+         ...+..+.+++.+|+..||.+|||+.+++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         236 PNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             ccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence            0         000         123578999999999999999999999987

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.93  E-value=1.5e-25  Score=216.70  Aligned_cols=175  Identities=27%  Similarity=0.443  Sum_probs=144.8

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ ++|.+++..  ...+++.++..++.|++.||+|||+.+++|+||+|+||+++.++.++|+|||.+.........
T Consensus        80 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~  157 (260)
T cd06606          80 LEYVSGGSLSSLLKK--FGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG  157 (260)
T ss_pred             EEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence            68886 599999874  348999999999999999999999999999999999999999999999999998776442210


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~-~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                       .......++..|+|||.+...   ..+.++|+||||+++|+|++|..||.... .......+......+.++..++..+
T Consensus       158 -~~~~~~~~~~~y~~pE~~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  233 (260)
T cd06606         158 -EGTGSVRGTPYWMAPEVIRGE---EYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEA  233 (260)
T ss_pred             -ccccCCCCCccccCHhhhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHH
Confidence             112345688899999998754   47889999999999999999999998765 3333333333345556777889999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHH
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      .++|.+||+.+|++||++.++++
T Consensus       234 ~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         234 KDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             HHHHHHhCcCChhhCCCHHHHhh
Confidence            99999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=2.2e-25  Score=216.34  Aligned_cols=172  Identities=28%  Similarity=0.527  Sum_probs=144.9

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++..  ...+++..+..++.|++.||.|||++||+|+||+|+||+++.++.++|+|||++.......  
T Consensus        78 ~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~--  153 (254)
T cd06627          78 LEYAENGSLRQIIKK--FGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS--  153 (254)
T ss_pred             EecCCCCcHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCc--
Confidence            688885 89999874  4679999999999999999999999999999999999999999999999999987764422  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                       .......++..|+|||...+.   .++.++|+||||+++|+|++|..||............. ....+.++..++..+.
T Consensus       154 -~~~~~~~~~~~y~~pe~~~~~---~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  228 (254)
T cd06627         154 -KDDASVVGTPYWMAPEVIEMS---GASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIV-QDDHPPLPEGISPELK  228 (254)
T ss_pred             -ccccccccchhhcCHhhhcCC---CCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHh-ccCCCCCCCCCCHHHH
Confidence             112345678899999998744   47889999999999999999999998766554444443 2345567778899999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 010713          160 NVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +++.+||..+|++||++.+++.
T Consensus       229 ~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         229 DFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             HHHHHHHhCChhhCcCHHHHhc
Confidence            9999999999999999999987

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.93  E-value=1.2e-25  Score=220.28  Aligned_cols=170  Identities=25%  Similarity=0.312  Sum_probs=141.1

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++..  ...+++.++..++.||++||.|||+++++|+||+|+||++++++.++|+|||++......   
T Consensus        79 ~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~---  153 (258)
T cd05578          79 VDLLLGGDLRYHLSQ--KVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPD---  153 (258)
T ss_pred             EeCCCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCC---
Confidence            688985 89998864  368999999999999999999999999999999999999999999999999988765331   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHhccCCCCCCCCCcH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV---DEIYDAVVRRQEIPPIPSGLPP  156 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~---~e~~~~i~~~~~~~~~~~~~s~  156 (503)
                       .......++..|+|||.+...   .++.++|+||||+++|+|++|..||...+.   ....... .. .....+..++.
T Consensus       154 -~~~~~~~~~~~y~~PE~~~~~---~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~  227 (258)
T cd05578         154 -TLTTSTSGTPGYMAPEVLCRQ---GYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQ-ET-ADVLYPATWST  227 (258)
T ss_pred             -ccccccCCChhhcCHHHHccc---CCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHh-cc-ccccCcccCcH
Confidence             122345688899999998754   478899999999999999999999987663   3333222 21 44566778899


Q ss_pred             HHHHHHHHhhhcCCCCCCCH--HHHHH
Q 010713          157 AVENVLLGCFEYDLRSRPLM--TDILR  181 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~RPS~--~elL~  181 (503)
                      .+.++|.+||+.||.+||++  .|+++
T Consensus       228 ~~~~~i~~~l~~~p~~R~~~~~~~l~~  254 (258)
T cd05578         228 EAIDAINKLLERDPQKRLGDNLKDLKN  254 (258)
T ss_pred             HHHHHHHHHccCChhHcCCccHHHHhc
Confidence            99999999999999999999  66665

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.93  E-value=1.4e-25  Score=207.95  Aligned_cols=161  Identities=16%  Similarity=0.186  Sum_probs=127.3

Q ss_pred             CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCCCCCCC
Q 010713            6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPR   85 (503)
Q Consensus         6 GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~   85 (503)
                      |||.+++.. .+..+++.+++.++.|++.||+|||+++      ||+||+++.++.+++  ||++.....        ..
T Consensus         1 GsL~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~--------~~   63 (176)
T smart00750        1 VSLADILEV-RGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTP--------EQ   63 (176)
T ss_pred             CcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecc--------cc
Confidence            789999974 3567999999999999999999999998      999999999999999  999876532        12


Q ss_pred             ccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHhccCCC-----CCCCCCcH--H
Q 010713           86 RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV-DEIYDAVVRRQEIP-----PIPSGLPP--A  157 (503)
Q Consensus        86 ~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-~e~~~~i~~~~~~~-----~~~~~~s~--~  157 (503)
                      ..|++.|+|||++.+.   .++.++|||||||++|||++|..||..... ......+.......     ..+..++.  .
T Consensus        64 ~~g~~~y~aPE~~~~~---~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (176)
T smart00750       64 SRVDPYFMAPEVIQGQ---SYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARS  140 (176)
T ss_pred             CCCcccccChHHhcCC---CCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhh
Confidence            2688999999999754   688999999999999999999999976543 23333333221111     11222333  6


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHHHHHhh
Q 010713          158 VENVLLGCFEYDLRSRPLMTDILRVFKSS  186 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS~~elL~~L~~i  186 (503)
                      +.++|.+||..+|.+||++.++++.+...
T Consensus       141 ~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      141 FADFMRVCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             HHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence            99999999999999999999999976544

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.93  E-value=3e-25  Score=215.51  Aligned_cols=171  Identities=26%  Similarity=0.414  Sum_probs=144.6

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ ++|.+++..  ...+++.++..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||++.......  
T Consensus        72 ~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~--  147 (250)
T cd05123          72 LEYAPGGELFSHLSK--EGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG--  147 (250)
T ss_pred             EecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC--
Confidence            68995 699999973  4468999999999999999999999999999999999999999999999999987654321  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                       .......++..|+|||...+.   ..+.++|+||||+++|++++|..||...+..+....+..  ....++...+..+.
T Consensus       148 -~~~~~~~~~~~~~~Pe~~~~~---~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~  221 (250)
T cd05123         148 -SRTNTFCGTPEYLAPEVLLGK---GYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK--DPLRFPEFLSPEAR  221 (250)
T ss_pred             -CcccCCcCCccccChHHhCCC---CCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc--CCCCCCCCCCHHHH
Confidence             223455678899999998744   467899999999999999999999988777666666654  44567778899999


Q ss_pred             HHHHHhhhcCCCCCCCH---HHHHH
Q 010713          160 NVLLGCFEYDLRSRPLM---TDILR  181 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~---~elL~  181 (503)
                      ++|.+||..||++||++   .++++
T Consensus       222 ~~i~~~l~~~p~~R~~~~~~~~l~~  246 (250)
T cd05123         222 DLISGLLQKDPTKRLGSGGAEEIKA  246 (250)
T ss_pred             HHHHHHhcCCHhhCCCcccHHHHHh
Confidence            99999999999999999   55554

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.93  E-value=5.5e-26  Score=248.77  Aligned_cols=183  Identities=22%  Similarity=0.363  Sum_probs=159.7

Q ss_pred             CcCCC-CCHHHHHHhhc--------CC----CCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEec
Q 010713            1 MKFYE-GSVGDRMAQLK--------GG----KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV   67 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~--------~~----~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DF   67 (503)
                      +||+. |+|.++|....        +.    +|+..+.+.|+.||+.|++||-++.++||||-..|+||.++..+||+||
T Consensus       568 FEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDf  647 (774)
T KOG1026|consen  568 FEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDF  647 (774)
T ss_pred             EEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEeccc
Confidence            59998 99999997652        12    3889999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccC
Q 010713           68 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQE  146 (503)
Q Consensus        68 Gla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~  146 (503)
                      |+++.....+... ......-..+|||||.+.   ++.++.+|||||||++|||+++ |..||.+.+.++.++.+..+..
T Consensus       648 GLsRdiYssDYYk-~~~~t~lPIRWMppEsIl---y~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~l  723 (774)
T KOG1026|consen  648 GLSRDIYSSDYYK-VRGNTLLPIRWMPPESIL---YGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQL  723 (774)
T ss_pred             ccchhhhhhhhhc-ccCCceeeeecCCHHHhh---cCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCc
Confidence            9998765433211 111223456999999998   6689999999999999999999 9999999999999998887665


Q ss_pred             CCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          147 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       147 ~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                       .+.|..+|.++.+||..||+.+|.+||+++||-..|+....
T Consensus       724 -L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~  764 (774)
T KOG1026|consen  724 -LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ  764 (774)
T ss_pred             -ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence             88899999999999999999999999999999999987654

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.93  E-value=2e-25  Score=228.14  Aligned_cols=183  Identities=18%  Similarity=0.244  Sum_probs=146.3

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCC--
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL--   78 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~--   78 (503)
                      |||++|+|.+++.  ....+++..+..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||++........  
T Consensus        99 ~e~~~~~l~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~  176 (335)
T PTZ00024         99 MDIMASDLKKVVD--RKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSD  176 (335)
T ss_pred             EeccccCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccceeecccccccc
Confidence            7999999999996  456799999999999999999999999999999999999999999999999999876541110  


Q ss_pred             ---------CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC
Q 010713           79 ---------PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP  149 (503)
Q Consensus        79 ---------~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~  149 (503)
                               .........+++.|+|||.+.+.  ..++.++|+|||||++|+|++|..||.+.+..+....+......+.
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~  254 (335)
T PTZ00024        177 TLSKDETMQRREEMTSKVVTLWYRAPELLMGA--EKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPN  254 (335)
T ss_pred             cccccccccccccccccccccCCCCChhcccC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCc
Confidence                     01122234567889999998643  2468899999999999999999999998877666555443211110


Q ss_pred             --------------------------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          150 --------------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       150 --------------------------~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                                                .....+..+.++|.+||+.+|++||++.+++.      ++|+..
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~------~~~~~~  318 (335)
T PTZ00024        255 EDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK------HEYFKS  318 (335)
T ss_pred             hhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc------CcccCC
Confidence                                      11345788999999999999999999999998      888764

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=8.1e-26  Score=224.78  Aligned_cols=197  Identities=24%  Similarity=0.373  Sum_probs=163.7

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      .||++| +|--.+.  ++.+|+++.++.|..+|+.||.|||++||++||||.+|+|++..|++||+|+|+++.-..   +
T Consensus       330 ieyv~ggdlmfhmq--rqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~---~  404 (593)
T KOG0695|consen  330 IEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG---P  404 (593)
T ss_pred             EEEecCcceeeehh--hhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCC---C
Confidence            378886 5544443  567899999999999999999999999999999999999999999999999999876433   3


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCC-------CC-hHHHHHHHHhccCCCCCC
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-------RS-VDEIYDAVVRRQEIPPIP  151 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~-------~~-~~e~~~~i~~~~~~~~~~  151 (503)
                      .....+++|||.|.|||++.+.   .|.+++|.|+||++++||+.|+.||.-       .+ ..-+++.++.+  ...+|
T Consensus       405 gd~tstfcgtpnyiapeilrge---eygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilek--qirip  479 (593)
T KOG0695|consen  405 GDTTSTFCGTPNYIAPEILRGE---EYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEK--QIRIP  479 (593)
T ss_pred             CcccccccCCCcccchhhhccc---ccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhh--ccccc
Confidence            4456688999999999999976   688999999999999999999999962       12 22344444443  34578


Q ss_pred             CCCcHHHHHHHHHhhhcCCCCCCC------HHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCCc
Q 010713          152 SGLPPAVENVLLGCFEYDLRSRPL------MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGYT  213 (503)
Q Consensus       152 ~~~s~~l~~LI~~cL~~DP~~RPS------~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~~  213 (503)
                      ..++-....+++..|++||.+|..      +.++..      |+||..++|..++++...||..|..+
T Consensus       480 rslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~------h~ffr~idwd~leqk~v~ppf~p~i~  541 (593)
T KOG0695|consen  480 RSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKS------HAFFRSIDWDLLEQKQVLPPFQPQIT  541 (593)
T ss_pred             ceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhc------chhhhhCCHHHHhhcccCCCCCCccc
Confidence            889999999999999999999953      444444      89999999999999999999988754

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.93  E-value=3.1e-25  Score=227.16  Aligned_cols=176  Identities=19%  Similarity=0.231  Sum_probs=140.4

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC-
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP-   79 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~-   79 (503)
                      |||++++|.+++..   ..+++..+..++.||+.||+|||++||+|+||||+||+++.++.++|+|||++......... 
T Consensus        88 ~e~~~~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~  164 (337)
T cd07852          88 FEYMETDLHAVIRA---NILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENP  164 (337)
T ss_pred             ecccccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccccc
Confidence            78999999988853   37899999999999999999999999999999999999999999999999998765432211 


Q ss_pred             -CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC-----------
Q 010713           80 -SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-----------  147 (503)
Q Consensus        80 -~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~-----------  147 (503)
                       ........++..|+|||.+.+.  ..++.++|+||||+++|+|++|+.||.+....+....+......           
T Consensus       165 ~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (337)
T cd07852         165 ENPVLTDYVATRWYRAPEILLGS--TRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKS  242 (337)
T ss_pred             cCcchhcccccccccCceeeecc--ccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHh
Confidence             1122345688999999987642  25678999999999999999999999876655443333221110           


Q ss_pred             ------------------CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          148 ------------------PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       148 ------------------~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                                        ......++.++.++|.+||+.||++|||+.++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~  294 (337)
T cd07852         243 PFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALE  294 (337)
T ss_pred             hhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhh
Confidence                              0112347889999999999999999999999998

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.93  E-value=2.4e-25  Score=220.25  Aligned_cols=176  Identities=21%  Similarity=0.284  Sum_probs=140.9

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++++|.+++.. ....+++.+++.++.||+.||+|||++|++|+||+|+||++++++.++|+|||++........  
T Consensus        79 ~e~~~~~l~~~~~~-~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~--  155 (287)
T cd07840          79 FEYMDHDLTGLLDS-PEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS--  155 (287)
T ss_pred             eccccccHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc--
Confidence            68999999998864 235799999999999999999999999999999999999999999999999999876643221  


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC-----------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-----------  149 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~-----------  149 (503)
                      .......++..|+|||.+.+.  ..++.++|+||||+++|+|++|..||...........+......+.           
T Consensus       156 ~~~~~~~~~~~y~~PE~~~~~--~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (287)
T cd07840         156 ADYTNRVITLWYRPPELLLGA--TRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLP  233 (287)
T ss_pred             ccccccccccccCCceeeEcc--ccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccch
Confidence            122334567889999987643  2478899999999999999999999988776655554433211100           


Q ss_pred             ------------------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          150 ------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       150 ------------------~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                                        +...+++.+.++|.+||..+|++||++.++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         234 WFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             hhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence                              01123889999999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.93  E-value=4.9e-25  Score=217.78  Aligned_cols=175  Identities=22%  Similarity=0.272  Sum_probs=140.6

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++++|.+++... ...+++.++..++.|++.||+|||++||+|+||+|+||+++.++.++|+|||++......   .
T Consensus        77 ~e~~~~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~---~  152 (282)
T cd07829          77 FEYCDMDLKKYLDKR-PGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIP---L  152 (282)
T ss_pred             ecCcCcCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCC---c
Confidence            689999999999752 257999999999999999999999999999999999999999999999999998765331   1


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC-------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-------------  147 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~-------------  147 (503)
                      .......++..|+|||.+.+.  ..++.++|+||||+++|+|++|..||......+.+..+......             
T Consensus       153 ~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (282)
T cd07829         153 RTYTHEVVTLWYRAPEILLGS--KHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLP  230 (282)
T ss_pred             cccCccccCcCcCChHHhcCC--cCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccc
Confidence            122334567789999998643  25788999999999999999999999887665554444321100             


Q ss_pred             ------C--------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          148 ------P--------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       148 ------~--------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                            +        .....++..+.++|.+||..||++||++.+++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         231 DYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             cccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence                  0        011234788999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.93  E-value=3e-25  Score=222.33  Aligned_cols=176  Identities=18%  Similarity=0.192  Sum_probs=140.0

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++++|.+++.. ....+++.++..++.|++.||+|||++||+|+||||+||++++++.+||+|||++........  
T Consensus        95 ~e~~~~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~--  171 (302)
T cd07864          95 FEYMDHDLMGLLES-GLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEES--  171 (302)
T ss_pred             EcccCccHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccccccccCCcc--
Confidence            68999998888864 345799999999999999999999999999999999999999999999999999876543221  


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------  148 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~------------  148 (503)
                      .......++..|+|||.+.+.  ..++.++|+|||||++|+|++|+.||...+..+....+......+            
T Consensus       172 ~~~~~~~~~~~y~~PE~~~~~--~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (302)
T cd07864         172 RPYTNKVITLWYRPPELLLGE--ERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLP  249 (302)
T ss_pred             cccccceeccCccChHHhcCC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccc
Confidence            111223457789999988643  246789999999999999999999998766555444443321110            


Q ss_pred             ----------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          149 ----------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       149 ----------------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                                      .....++..+.++|.+||..||.+||++.++++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         250 YFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             cccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence                            011246899999999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.93  E-value=2.7e-25  Score=250.78  Aligned_cols=185  Identities=22%  Similarity=0.369  Sum_probs=159.1

Q ss_pred             CcCCC-CCHHHHHHhhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCccccc
Q 010713            1 MKFYE-GSVGDRMAQLK-----GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL   74 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~-----~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~   74 (503)
                      +|||+ |+|..+|+..+     ...|+..+.+.++.||++|+.||+++++|||||...|+|++....+||+|||+|+.+.
T Consensus       774 leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy  853 (1025)
T KOG1095|consen  774 LEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLARDIY  853 (1025)
T ss_pred             ehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhHhhh
Confidence            69999 59999998641     4578999999999999999999999999999999999999999999999999998544


Q ss_pred             CCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCC
Q 010713           75 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSG  153 (503)
Q Consensus        75 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~  153 (503)
                      ......... ...-...|||||.+.   .+.++.++||||||++|||++| |..||.+.++.++...+.... +.+.|..
T Consensus       854 ~~~yyr~~~-~a~lPvkWm~PEsl~---d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg-RL~~P~~  928 (1025)
T KOG1095|consen  854 DKDYYRKHG-EAMLPVKWMPPESLK---DGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG-RLDPPSY  928 (1025)
T ss_pred             hchheeccC-ccccceecCCHHHHh---hcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC-ccCCCCC
Confidence            322211111 123346899999998   4579999999999999999999 999999999999988777665 7888999


Q ss_pred             CcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCc
Q 010713          154 LPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSV  190 (503)
Q Consensus       154 ~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~  190 (503)
                      ++..+.++|..||+.+|++||++..|++.+..+....
T Consensus       929 CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~  965 (1025)
T KOG1095|consen  929 CPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA  965 (1025)
T ss_pred             CChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence            9999999999999999999999999999888776544

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.93  E-value=2.7e-25  Score=221.56  Aligned_cols=170  Identities=26%  Similarity=0.463  Sum_probs=137.4

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecccCCCcEEEccCCcEEEEecCCcccccCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs-~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~   78 (503)
                      |||++| +|.+++.  ..+.+++..+..++.|++.||.|||+ ++++|+||||+||+++.++.++|+|||++.....   
T Consensus        82 ~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~---  156 (284)
T cd06620          82 MEFMDCGSLDRIYK--KGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELIN---  156 (284)
T ss_pred             EecCCCCCHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhh---
Confidence            789985 8888875  35679999999999999999999997 6899999999999999999999999998765422   


Q ss_pred             CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChH-----------HHHHHHHhccCC
Q 010713           79 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD-----------EIYDAVVRRQEI  147 (503)
Q Consensus        79 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-----------e~~~~i~~~~~~  147 (503)
                        .......++..|+|||++.+.   .++.++|+|||||++|+|++|..||......           +....+... ..
T Consensus       157 --~~~~~~~~~~~~~aPE~~~~~---~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  230 (284)
T cd06620         157 --SIADTFVGTSTYMSPERIQGG---KYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQE-PP  230 (284)
T ss_pred             --hccCccccCcccCCHHHHccC---CCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhc-cC
Confidence              112345789999999998643   6788999999999999999999999865432           222222221 22


Q ss_pred             CCCCC-CCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          148 PPIPS-GLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       148 ~~~~~-~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +.++. .++..+.+||.+||+.||++||++.|+++
T Consensus       231 ~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~  265 (284)
T cd06620         231 PRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCA  265 (284)
T ss_pred             CCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            23333 37889999999999999999999999998

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.93  E-value=3.4e-25  Score=218.38  Aligned_cols=174  Identities=24%  Similarity=0.413  Sum_probs=145.1

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ ++|.+++.  ..+.+++.++..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||++.........
T Consensus        81 ~e~~~~~~L~~~l~--~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~  158 (280)
T cd05581          81 LEYAPNGELLQYIR--KYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSP  158 (280)
T ss_pred             EcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccc
Confidence            78995 69999997  3457999999999999999999999999999999999999999999999999998765432211


Q ss_pred             -----------------CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 010713           80 -----------------SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV  142 (503)
Q Consensus        80 -----------------~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~  142 (503)
                                       ........++..|+|||.....   .++.++|+||||++++++++|..||........+..+.
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~---~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~  235 (280)
T cd05581         159 ESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEK---PAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKIL  235 (280)
T ss_pred             ccCCCCCccccccccccccccccccCCccccCHHHhCCC---CCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH
Confidence                             0122234678899999998743   57889999999999999999999999877666665554


Q ss_pred             hccCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCH----HHHHH
Q 010713          143 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLM----TDILR  181 (503)
Q Consensus       143 ~~~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~----~elL~  181 (503)
                      .  ....++..+++.+.++|.+||+.+|.+||++    .++++
T Consensus       236 ~--~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         236 K--LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             h--cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence            3  3445667889999999999999999999999    78776

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.93  E-value=2e-25  Score=253.95  Aligned_cols=182  Identities=21%  Similarity=0.300  Sum_probs=141.9

Q ss_pred             CcCCC-CCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHC-------CCeecccCCCcEEEccC-----------
Q 010713            1 MKFYE-GSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSK-------GILVLNLKPFNFILNEA-----------   59 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~--~~~~Ls~~~vl~i~~QIl~aL~yLHs~-------gIvHrDLKP~NILld~~-----------   59 (503)
                      ||||+ |+|.++|...  ....+++..++.|+.||+.||+|||+.       +|+||||||+||||+..           
T Consensus        93 MEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~  172 (1021)
T PTZ00266         93 MEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQA  172 (1021)
T ss_pred             EeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccc
Confidence            79998 5999999753  246799999999999999999999985       49999999999999642           


Q ss_pred             ------CcEEEEecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 010713           60 ------DRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS  133 (503)
Q Consensus        60 ------~~vKL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~  133 (503)
                            ..+||+|||++.....    ........||+.|+|||++.+. ...++.++|||||||+||+|++|..||....
T Consensus       173 ~n~ng~~iVKLsDFGlAr~l~~----~s~~~s~vGTp~YmAPEvL~ge-~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~  247 (1021)
T PTZ00266        173 NNLNGRPIAKIGDFGLSKNIGI----ESMAHSCVGTPYYWSPELLLHE-TKSYDDKSDMWALGCIIYELCSGKTPFHKAN  247 (1021)
T ss_pred             cccCCCCceEEccCCccccccc----cccccccCCCccccCHHHHhcc-CCCCCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence                  3489999999876532    1122345789999999998643 2357889999999999999999999998655


Q ss_pred             hHHHHHHHHhccCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH--HHHhhcc
Q 010713          134 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR--VFKSSQN  188 (503)
Q Consensus       134 ~~e~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~--~L~~i~~  188 (503)
                      ....+.......... .....+.++.+||..||..+|.+||++.+++.  .++.+..
T Consensus       248 ~~~qli~~lk~~p~l-pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~~  303 (1021)
T PTZ00266        248 NFSQLISELKRGPDL-PIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVGP  303 (1021)
T ss_pred             cHHHHHHHHhcCCCC-CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcCC
Confidence            444333333322211 12457899999999999999999999999995  5554433

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.93  E-value=1.4e-25  Score=251.50  Aligned_cols=177  Identities=21%  Similarity=0.322  Sum_probs=131.1

Q ss_pred             CcCCCCCHHHHHHhhcCCCC-CHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCccccc----C
Q 010713            1 MKFYEGSVGDRMAQLKGGKL-SLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL----G   75 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~L-s~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~----~   75 (503)
                      ||||+-+|.+.+.+ .+... .....+++++||++||+|+|++|||||||||.||++++++.+||+|||+|....    .
T Consensus       675 MEyCE~~ll~~iI~-~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~  753 (1351)
T KOG1035|consen  675 MEYCEKTLLRDIIR-RNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLES  753 (1351)
T ss_pred             HhhhhhhHHHHHHH-hcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhh
Confidence            99999755555543 22222 477899999999999999999999999999999999999999999999998721    0


Q ss_pred             ----------CCC-CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHh
Q 010713           76 ----------IPL-PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR-SVDEIYDAVVR  143 (503)
Q Consensus        76 ----------~~~-~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~-~~~e~~~~i~~  143 (503)
                                ... .....+..+||..|+|||++.+....+|+.|+|+||||++++||+.   ||... ....++..+..
T Consensus       754 ~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~  830 (1351)
T KOG1035|consen  754 IDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRK  830 (1351)
T ss_pred             HhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhccc
Confidence                      001 1124567789999999999987654579999999999999999984   45432 22223333321


Q ss_pred             ccCCCC--CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          144 RQEIPP--IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       144 ~~~~~~--~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ...+.+  +...--+.-..+|+.|++.||.+|||+.|+|+
T Consensus       831 g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~  870 (1351)
T KOG1035|consen  831 GSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLN  870 (1351)
T ss_pred             CCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence            111111  12223355678999999999999999999987

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.93  E-value=6.5e-25  Score=213.53  Aligned_cols=172  Identities=30%  Similarity=0.518  Sum_probs=145.9

Q ss_pred             CcCCCC-CHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCC
Q 010713            1 MKFYEG-SVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~--~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~   77 (503)
                      |||++| +|.+++...  ....+++..+..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||++...... 
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~-  156 (256)
T cd08530          78 MEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN-  156 (256)
T ss_pred             ehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence            688875 899988653  2467899999999999999999999999999999999999999999999999998776432 


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHH
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA  157 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~  157 (503)
                          ......+++.|+|||.+.+.   .++.++|+||||+++|+|++|+.||...+..+....+.. ...+..+..++.+
T Consensus       157 ----~~~~~~~~~~~~~Pe~~~~~---~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  228 (256)
T cd08530         157 ----MAKTQIGTPHYMAPEVWKGR---PYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQR-GKYPPIPPIYSQD  228 (256)
T ss_pred             ----CcccccCCccccCHHHHCCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc-CCCCCCchhhCHH
Confidence                22234678899999999743   578899999999999999999999998877666555543 3444556678999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          158 VENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +.+++.+||+.+|++||++.++++
T Consensus       229 ~~~li~~~l~~~p~~Rp~~~~~l~  252 (256)
T cd08530         229 LQNFIRSMLQVKPKLRPNCDKILA  252 (256)
T ss_pred             HHHHHHHHcCCCcccCCCHHHHhc
Confidence            999999999999999999999987

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.93  E-value=2.4e-25  Score=241.59  Aligned_cols=184  Identities=19%  Similarity=0.171  Sum_probs=136.7

Q ss_pred             CcCCCCCHHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCC
Q 010713            1 MKFYEGSVGDRMAQLK---GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~---~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~   77 (503)
                      ||++.++|.+++....   .......++..++.||+.||+|||++||+||||||+|||++.++.+||+|||++..+....
T Consensus       242 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~  321 (501)
T PHA03210        242 TQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKER  321 (501)
T ss_pred             EeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEeCCCceecCccc
Confidence            5778888888875421   2234567788999999999999999999999999999999999999999999997664321


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCC-CCCC--ChHHHHHHHHhccC--------
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP-RCGR--SVDEIYDAVVRRQE--------  146 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~P-f~~~--~~~e~~~~i~~~~~--------  146 (503)
                        ........||..|+|||++.+.   .++.++|||||||++|||++|..+ |...  .....+..+.....        
T Consensus       322 --~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~  396 (501)
T PHA03210        322 --EAFDYGWVGTVATNSPEILAGD---GYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPD  396 (501)
T ss_pred             --ccccccccCCcCCCCchhhcCC---CCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCC
Confidence              1112345799999999999754   688999999999999999998754 4322  12122222111000        


Q ss_pred             -------------CC----C-----CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCC
Q 010713          147 -------------IP----P-----IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGG  195 (503)
Q Consensus       147 -------------~~----~-----~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~  195 (503)
                                   ..    .     ....++..+.++|.+||+.||.+|||+.|+++      ++|+....
T Consensus       397 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~------hp~f~~~~  461 (501)
T PHA03210        397 PPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA------LPLFSAEE  461 (501)
T ss_pred             cHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh------ChhhhcCC
Confidence                         00    0     01235677888999999999999999999998      88876644

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.93  E-value=4.4e-25  Score=222.23  Aligned_cols=178  Identities=20%  Similarity=0.318  Sum_probs=143.7

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.   ...+++..+..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||++......   
T Consensus        96 ~e~~~~~~L~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~---  169 (292)
T cd06657          96 MEFLEGGALTDIVT---HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE---  169 (292)
T ss_pred             EecCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccc---
Confidence            789986 7887763   456899999999999999999999999999999999999999999999999987654321   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-CCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-EIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~-~~~~~~~~~s~~l  158 (503)
                      ........++..|+|||.+.+.   .++.++|+||||+++|+|++|..||......+....+.... ........++..+
T Consensus       170 ~~~~~~~~~~~~y~~pE~~~~~---~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  246 (292)
T cd06657         170 VPRRKSLVGTPYWMAPELISRL---PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSL  246 (292)
T ss_pred             cccccccccCccccCHHHhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHH
Confidence            1122345688899999998643   57889999999999999999999998876665544443221 1112234678999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      .+++.+||+.+|.+||++.++++      ++|+..
T Consensus       247 ~~li~~~l~~~P~~R~~~~~ll~------~~~~~~  275 (292)
T cd06657         247 KGFLDRLLVRDPAQRATAAELLK------HPFLAK  275 (292)
T ss_pred             HHHHHHHHhCCcccCcCHHHHhc------ChHHhc
Confidence            99999999999999999999998      666654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.93  E-value=9.3e-26  Score=238.51  Aligned_cols=197  Identities=19%  Similarity=0.221  Sum_probs=158.2

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCccccc-----
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL-----   74 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~-----   74 (503)
                      |||++| ++-.+|.  +.+-|+++.++.|+.++.+|+++.|+.|+|||||||+|||||.+|++||+|||++.-+.     
T Consensus       708 MdYIPGGDmMSLLI--rmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHds  785 (1034)
T KOG0608|consen  708 MDYIPGGDMMSLLI--RMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS  785 (1034)
T ss_pred             EeccCCccHHHHHH--HhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceecccc
Confidence            899995 8888886  56889999999999999999999999999999999999999999999999999986432     


Q ss_pred             ----CCCCCC------------------------------CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHH
Q 010713           75 ----GIPLPS------------------------------SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII  120 (503)
Q Consensus        75 ----~~~~~~------------------------------~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLy  120 (503)
                          .++...                              ......+||+.|+|||++...   .|+..+|.||.|+|||
T Consensus       786 kYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~---g~~q~cdwws~gvil~  862 (1034)
T KOG0608|consen  786 KYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLART---GYTQLCDWWSVGVILY  862 (1034)
T ss_pred             ccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhccc---CccccchhhHhhHHHH
Confidence                111000                              011234799999999999843   6889999999999999


Q ss_pred             HHHhCCCCCCCCChHHHHHHHHhccCCCCCC--CCCcHHHHHHHHHhhhcCCCCCC---CHHHHHHHHHhhccCcCCCCC
Q 010713          121 EMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDLRSRP---LMTDILRVFKSSQNSVHSDGG  195 (503)
Q Consensus       121 eLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~--~~~s~~l~~LI~~cL~~DP~~RP---S~~elL~~L~~i~~~~~~~~~  195 (503)
                      ||+.|+.||....+.+...++++......++  ..+++++.+||.+++. +++.|.   ..+++..      |+||..+|
T Consensus       863 em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKa------HpfFkgID  935 (1034)
T KOG0608|consen  863 EMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKA------HPFFKGID  935 (1034)
T ss_pred             HHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-Chhhhhcccchhhhhc------Cccccccc
Confidence            9999999999988888777776665555444  6799999999988765 678886   3444555      99999999


Q ss_pred             CCCCCCcCCCCCCCCC
Q 010713          196 WTGHGSRILPDKSSSG  211 (503)
Q Consensus       196 w~~~~~~~~~~p~~~~  211 (503)
                      |..+  +..+.|..|.
T Consensus       936 fssl--Rkq~ApYIP~  949 (1034)
T KOG0608|consen  936 FSSL--RKQRAPYIPR  949 (1034)
T ss_pred             hHhh--hhccCCcCcc
Confidence            9986  4444445544

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=1.5e-25  Score=233.51  Aligned_cols=181  Identities=23%  Similarity=0.400  Sum_probs=137.1

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---CeecccCCCcEEEccCCcEEEEecCCcccccCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG---ILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~g---IvHrDLKP~NILld~~~~vKL~DFGla~~~~~~   76 (503)
                      +||+. |||.+.|.......|++..+++|+.++|+||+|||+..   |+||||||+|||+|++.++||+|||+|+.....
T Consensus       151 YEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~  230 (361)
T KOG1187|consen  151 YEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEG  230 (361)
T ss_pred             EEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCcc
Confidence            58888 89999998633228999999999999999999999864   999999999999999999999999999654320


Q ss_pred             CCCCCCCCCc-cCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC---h---HHHHHHHHhcc----
Q 010713           77 PLPSSDLPRR-LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS---V---DEIYDAVVRRQ----  145 (503)
Q Consensus        77 ~~~~~~~~~~-~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~---~---~e~~~~i~~~~----  145 (503)
                         ....... .||..|+|||++.   .+..+.++||||||++|+||+||+.+.....   .   .+.........    
T Consensus       231 ---~~~~~~~~~gt~gY~~PEy~~---~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~e  304 (361)
T KOG1187|consen  231 ---DTSVSTTVMGTFGYLAPEYAS---TGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLRE  304 (361)
T ss_pred             ---ccceeeecCCCCccCChhhhc---cCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhh
Confidence               1111122 8999999999997   3578999999999999999999998876432   1   11111121111    


Q ss_pred             -CCCCCC-CCCc-----HHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhc
Q 010713          146 -EIPPIP-SGLP-----PAVENVLLGCFEYDLRSRPLMTDILRVFKSSQ  187 (503)
Q Consensus       146 -~~~~~~-~~~s-----~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~  187 (503)
                       ..+.+. ..++     ..+..+..+|++.+|.+||+|.++++.|+.+.
T Consensus       305 iiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~  353 (361)
T KOG1187|consen  305 IVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL  353 (361)
T ss_pred             eeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence             111222 2223     23667889999999999999999999886554

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.92  E-value=5.1e-25  Score=218.76  Aligned_cols=171  Identities=21%  Similarity=0.370  Sum_probs=143.1

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.   ...+++..+..++.|++.||.+||++|++|+||+|+||+++.++.++|+|||++.......  
T Consensus        81 ~e~~~~~~l~~~i~---~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~--  155 (277)
T cd06641          81 MEYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--  155 (277)
T ss_pred             EEeCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccch--
Confidence            689985 8888874   4578999999999999999999999999999999999999999999999999886653311  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                       .......++..|+|||.+.+.   ..+.++|+|||||++|+|++|..||...........+.. ...+..+..++.++.
T Consensus       156 -~~~~~~~~~~~y~~PE~~~~~---~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  230 (277)
T cd06641         156 -IKRNTFVGTPFWMAPEVIKQS---AYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPK-NNPPTLEGNYSKPLK  230 (277)
T ss_pred             -hhhccccCCccccChhhhccC---CCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhc-CCCCCCCcccCHHHH
Confidence             122334678899999998743   567899999999999999999999987766555554432 334456677899999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 010713          160 NVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ++|.+||+.+|.+||++.++++
T Consensus       231 ~~i~~~l~~~p~~Rp~~~~~l~  252 (277)
T cd06641         231 EFVEACLNKEPSFRPTAKELLK  252 (277)
T ss_pred             HHHHHHccCChhhCcCHHHHHh
Confidence            9999999999999999999999

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.92  E-value=8e-25  Score=218.71  Aligned_cols=177  Identities=25%  Similarity=0.394  Sum_probs=140.1

Q ss_pred             CcCCCC-CHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCC
Q 010713            1 MKFYEG-SVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~--~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~   77 (503)
                      |||++| +|.+++...  ....+++..+..++.||+.||+|||+.+++|+||+|+||+++.++.++|+|||++...... 
T Consensus        80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~-  158 (287)
T cd06621          80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS-  158 (287)
T ss_pred             EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccccc-
Confidence            689985 898887643  3467899999999999999999999999999999999999999999999999998654321 


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCC-----ChHHHHHHHHhccCCCCCC-
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR-----SVDEIYDAVVRRQEIPPIP-  151 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~-----~~~e~~~~i~~~~~~~~~~-  151 (503)
                          ......++..|+|||.+.+.   .++.++|+|||||++|+|++|..||...     ...+....+... ..+..+ 
T Consensus       159 ----~~~~~~~~~~y~~pE~~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  230 (287)
T cd06621         159 ----LAGTFTGTSFYMAPERIQGK---PYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNM-PNPELKD  230 (287)
T ss_pred             ----ccccccCCccccCHHHhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcC-Cchhhcc
Confidence                11234577899999998743   6788999999999999999999999765     223333333321 111111 


Q ss_pred             -----CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          152 -----SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       152 -----~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                           ...++.+.++|.+||+.+|.+|||+.|+++      ++|+.
T Consensus       231 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~------~~~~~  270 (287)
T cd06621         231 EPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE------HPWIK  270 (287)
T ss_pred             CCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh------Ccccc
Confidence                 235678999999999999999999999999      66653

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.92  E-value=6e-25  Score=226.11  Aligned_cols=177  Identities=23%  Similarity=0.293  Sum_probs=139.7

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||+..+|.+++    ...+++..+..++.|++.||+|||+++++||||||+||+++.++.++|+|||++.....     
T Consensus        99 ~e~~~~~l~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~-----  169 (342)
T cd07879          99 MPYMQTDLQKIM----GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADA-----  169 (342)
T ss_pred             ecccccCHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCC-----
Confidence            467766666554    34689999999999999999999999999999999999999999999999999865422     


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC-------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-------------  147 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~-------------  147 (503)
                       ......++..|+|||.+.+.  ..++.++|+|||||++|+|++|+.||.+.+....+..+......             
T Consensus       170 -~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (342)
T cd07879         170 -EMTGYVVTRWYRAPEVILNW--MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKA  246 (342)
T ss_pred             -CCCCceeeecccChhhhcCc--cccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccc
Confidence             22345678899999998642  24788999999999999999999999887655544443321100             


Q ss_pred             --------CCC--------CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCC
Q 010713          148 --------PPI--------PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGG  195 (503)
Q Consensus       148 --------~~~--------~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~  195 (503)
                              +.+        ....+..+.+||.+||+.||.+||++.+++.      ++|+....
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~------h~~f~~~~  304 (342)
T cd07879         247 AKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALE------HPYFDSFR  304 (342)
T ss_pred             hHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhc------Ccchhhcc
Confidence                    001        1246788999999999999999999999988      77776543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.92  E-value=5.2e-25  Score=224.90  Aligned_cols=180  Identities=16%  Similarity=0.194  Sum_probs=136.5

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||+. |+|.+++.+.....+++..+..++.||+.||+|||++||+||||||+||+++.++.++++||+.+.........
T Consensus        78 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~  157 (328)
T cd08226          78 SPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQK  157 (328)
T ss_pred             EecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcc
Confidence            68888 49999987655567999999999999999999999999999999999999999999999999865332211100


Q ss_pred             CC----CCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC--------
Q 010713           80 SS----DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI--------  147 (503)
Q Consensus        80 ~~----~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~--------  147 (503)
                      ..    ......++..|+|||++.+. ...++.++|+|||||++|+|++|..||......+...........        
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (328)
T cd08226         158 AKVVYDFPQFSTSVLPWLSPELLRQD-LYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTF  236 (328)
T ss_pred             ccccccccccccCccCccChhhhcCC-CCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCcccccc
Confidence            00    01112345679999998753 234788999999999999999999999876654443332221100        


Q ss_pred             -------------------------------------CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          148 -------------------------------------PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       148 -------------------------------------~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                                                           .+.+..++..+.+||.+||+.||++|||+.++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~  307 (328)
T cd08226         237 PCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS  307 (328)
T ss_pred             chhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence                                                 0112345678999999999999999999999998

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.92  E-value=9.8e-25  Score=213.98  Aligned_cols=173  Identities=26%  Similarity=0.464  Sum_probs=142.7

Q ss_pred             CcCCCC-CHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCC
Q 010713            1 MKFYEG-SVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~--~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~   77 (503)
                      |||+++ +|.+++...  ....+++.+++.++.|++.||+|||++|++|+||+|+||+++. +.++|+|||++...... 
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~-  158 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGS-  158 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCC-
Confidence            688885 888888642  3467999999999999999999999999999999999999975 57999999998765332 


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHH
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA  157 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~  157 (503)
                        ........+++.|+|||.+.+.   .++.++|+||||+++|+|++|..||...........+.. ...+..+..++.+
T Consensus       159 --~~~~~~~~~~~~~~~pe~~~~~---~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  232 (260)
T cd08222         159 --CDLATTFTGTPYYMSPEALKHQ---GYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVE-GPTPSLPETYSRQ  232 (260)
T ss_pred             --cccccCCCCCcCccCHHHHccC---CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHc-CCCCCCcchhcHH
Confidence              1122345678899999998643   577889999999999999999999987766665555443 3445566788999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          158 VENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +.++|.+||..+|++||++.++++
T Consensus       233 ~~~li~~~l~~~p~~Rp~~~~il~  256 (260)
T cd08222         233 LNSIMQSMLNKDPSLRPSAAEILR  256 (260)
T ss_pred             HHHHHHHHhcCChhhCcCHHHHhh
Confidence            999999999999999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.92  E-value=3.4e-25  Score=222.78  Aligned_cols=177  Identities=21%  Similarity=0.300  Sum_probs=142.0

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.   ...+++.++..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++......   
T Consensus        95 ~e~~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~---  168 (293)
T cd06647          95 MEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE---  168 (293)
T ss_pred             EecCCCCcHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccc---
Confidence            688974 8998885   346899999999999999999999999999999999999999999999999988654332   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-cCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR-QEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~-~~~~~~~~~~s~~l  158 (503)
                      ........+++.|+|||.+...   .++.++|+||||+++|++++|..||...+.......+... ......+..++..+
T Consensus       169 ~~~~~~~~~~~~y~~PE~~~~~---~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  245 (293)
T cd06647         169 QSKRSTMVGTPYWMAPEVVTRK---AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIF  245 (293)
T ss_pred             ccccccccCChhhcCchhhccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHH
Confidence            1122344688899999998743   5788999999999999999999999876654443322221 11122345578899


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      .++|.+||..+|++||++.+++.      ++|+.
T Consensus       246 ~~li~~~l~~~p~~Rp~~~~il~------h~~~~  273 (293)
T cd06647         246 RDFLNRCLEMDVEKRGSAKELLQ------HPFLK  273 (293)
T ss_pred             HHHHHHHccCChhhCcCHHHHhc------CHHHh
Confidence            99999999999999999999998      66654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.92  E-value=1.4e-24  Score=222.41  Aligned_cols=175  Identities=19%  Similarity=0.278  Sum_probs=138.5

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++++|.+++.   ...+++..+..++.||++||+|||+++|+|+||+|+||+++.++.++|+|||++.....     
T Consensus        89 ~e~~~~~L~~~~~---~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~-----  160 (328)
T cd07856          89 TELLGTDLHRLLT---SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDP-----  160 (328)
T ss_pred             eehhccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCC-----
Confidence            6889889988874   45689999999999999999999999999999999999999999999999998865422     


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc---------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ---------------  145 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~---------------  145 (503)
                       ......++..|+|||.+.+.  ..++.++|+||||+++|+|++|..||...........+....               
T Consensus       161 -~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (328)
T cd07856         161 -QMTGYVSTRYYRAPEIMLTW--QKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSEN  237 (328)
T ss_pred             -CcCCCcccccccCceeeecc--CCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchh
Confidence             22344678899999987532  257889999999999999999999998765433222211100               


Q ss_pred             ---------CCCC-----CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          146 ---------EIPP-----IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       146 ---------~~~~-----~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                               ....     ....++..+.++|.+||+.+|++||++.+++.      ++|+.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~------~~~~~  292 (328)
T cd07856         238 TLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALA------HPYLA  292 (328)
T ss_pred             hHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhc------CCccc
Confidence                     0001     11357789999999999999999999999988      66654

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.92  E-value=1.1e-24  Score=224.30  Aligned_cols=176  Identities=24%  Similarity=0.299  Sum_probs=141.9

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++++|.+++.   ...+++..++.++.||+.||+|||++||+||||||+||+++.++.++|+|||++.....     
T Consensus        99 ~e~~~~~l~~~~~---~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~-----  170 (343)
T cd07880          99 MPFMGTDLGKLMK---HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDS-----  170 (343)
T ss_pred             EecCCCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccccccccc-----
Confidence            5788778888874   46799999999999999999999999999999999999999999999999999875432     


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------  148 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~------------  148 (503)
                       ......+++.|+|||.+.+.  ..++.++|+||||+++|+|++|..||.+.+....+..+.......            
T Consensus       171 -~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (343)
T cd07880         171 -EMTGYVVTRWYRAPEVILNW--MHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSED  247 (343)
T ss_pred             -CccccccCCcccCHHHHhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchh
Confidence             22344678899999998642  247889999999999999999999998776554444333211110            


Q ss_pred             -----------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          149 -----------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       149 -----------------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                                       .....+++.+.++|.+||+.||++|||+.+++.      ++|+..
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~------~~~~~~  303 (343)
T cd07880         248 AKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA------HPYFEE  303 (343)
T ss_pred             HHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc------CccHhh
Confidence                             112457888999999999999999999999998      676653

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.92  E-value=2e-25  Score=236.65  Aligned_cols=183  Identities=24%  Similarity=0.396  Sum_probs=159.2

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||+|+| +|.++|... ...++..+.+.++.+.+.||+|||+++++||||-.+|+|++.++.+||+|||+++.....   
T Consensus       240 mEl~~gGsL~~~L~k~-~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~---  315 (474)
T KOG0194|consen  240 MELCNGGSLDDYLKKN-KKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQY---  315 (474)
T ss_pred             EEecCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCcce---
Confidence            899995 999999853 336999999999999999999999999999999999999999999999999998664311   


Q ss_pred             CCCCC-CccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHH
Q 010713           80 SSDLP-RRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA  157 (503)
Q Consensus        80 ~~~~~-~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~  157 (503)
                       .... ...-...|+|||.+.   .+.+++++||||||+++||+++ |..||.+....++..++.....+.+.+...+..
T Consensus       316 -~~~~~~~klPirWLAPEtl~---~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~  391 (474)
T KOG0194|consen  316 -VMKKFLKKLPIRWLAPETLN---TGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPSKTPKE  391 (474)
T ss_pred             -eeccccccCcceecChhhhc---cCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCCCCHHH
Confidence             1111 112346899999998   4479999999999999999999 889999999999999997777888888999999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcC
Q 010713          158 VENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVH  191 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~  191 (503)
                      +..++.+|+..+|++||++.++.+.|+.+.....
T Consensus       392 ~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~  425 (474)
T KOG0194|consen  392 LAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE  425 (474)
T ss_pred             HHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence            9999999999999999999999999998866543

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.92  E-value=1.1e-24  Score=246.91  Aligned_cols=185  Identities=22%  Similarity=0.245  Sum_probs=140.8

Q ss_pred             CcCCCC-CHHHHHHhhc---------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCc
Q 010713            1 MKFYEG-SVGDRMAQLK---------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIP   70 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~---------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla   70 (503)
                      |||++| +|.+++....         ...++..+++.++.||+.||+|||++||+||||||+||+++.++.++|+|||++
T Consensus        81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLA  160 (932)
T PRK13184         81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAA  160 (932)
T ss_pred             EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcc
Confidence            799985 9999886421         234567788999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCC---------------CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChH
Q 010713           71 HLLLGIPL---------------PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD  135 (503)
Q Consensus        71 ~~~~~~~~---------------~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~  135 (503)
                      ........               .........||+.|+|||++.+.   .++.++|||||||++|+|+||..||......
T Consensus       161 k~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~---~~S~kSDIWSLGVILyELLTG~~PF~~~~~~  237 (932)
T PRK13184        161 IFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGV---PASESTDIYALGVILYQMLTLSFPYRRKKGR  237 (932)
T ss_pred             eecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCC---CCCcHhHHHHHHHHHHHHHHCCCCCCCcchh
Confidence            76521100               00111235699999999998754   6789999999999999999999999876544


Q ss_pred             HHHHHHHhcc-CCCCCCCCCcHHHHHHHHHhhhcCCCCCC-CHHHHHHHHHhhcc
Q 010713          136 EIYDAVVRRQ-EIPPIPSGLPPAVENVLLGCFEYDLRSRP-LMTDILRVFKSSQN  188 (503)
Q Consensus       136 e~~~~i~~~~-~~~~~~~~~s~~l~~LI~~cL~~DP~~RP-S~~elL~~L~~i~~  188 (503)
                      .......... ........+++.+.+++.+||+.||++|| ++.++++.|+....
T Consensus       238 ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq  292 (932)
T PRK13184        238 KISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ  292 (932)
T ss_pred             hhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            4332211111 01111246889999999999999999996 56777777776643

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.92  E-value=5.5e-25  Score=251.07  Aligned_cols=174  Identities=17%  Similarity=0.240  Sum_probs=126.6

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCc-------------------
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR-------------------   61 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~-------------------   61 (503)
                      |||++++|.+++.. ....+++.+++.++.||++||+|||++||+||||||+|||++..+.                   
T Consensus        59 ~e~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~  137 (793)
T PLN00181         59 LECEDVSLRQWLDN-PDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDAT  137 (793)
T ss_pred             hccCCccHHHHHhc-ccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCc
Confidence            68888999999964 3566999999999999999999999999999999999999965444                   


Q ss_pred             EEEEecCCcccccCCCC------------C-CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCC
Q 010713           62 AVLGDVGIPHLLLGIPL------------P-SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP  128 (503)
Q Consensus        62 vKL~DFGla~~~~~~~~------------~-~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~P  128 (503)
                      +|++|||+++.......            + ........||+.|||||++.+.   .++.++|||||||+||||++|..|
T Consensus       138 ~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~---~~~~~sDVwSlGviL~ELl~~~~~  214 (793)
T PLN00181        138 TKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGS---SSNCASDVYRLGVLLFELFCPVSS  214 (793)
T ss_pred             ccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccC---CCCchhhhhhHHHHHHHHhhCCCc
Confidence            45555555543211000            0 0001124588899999998754   688999999999999999999888


Q ss_pred             CCCCChHHHHHHHHhccCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          129 RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       129 f~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +....  .....+.... .++......+...+++.+||+.+|.+||++.|+++
T Consensus       215 ~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~  264 (793)
T PLN00181        215 REEKS--RTMSSLRHRV-LPPQILLNWPKEASFCLWLLHPEPSCRPSMSELLQ  264 (793)
T ss_pred             hhhHH--HHHHHHHHhh-cChhhhhcCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence            75322  1222222111 11111123456778999999999999999999987

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.92  E-value=2.1e-24  Score=222.52  Aligned_cols=176  Identities=20%  Similarity=0.240  Sum_probs=139.6

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      ||++.++|.+++.   ...+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||++.....     
T Consensus       101 ~~~~~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~-----  172 (345)
T cd07877         101 THLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----  172 (345)
T ss_pred             ehhcccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccccc-----
Confidence            4566778888774   34699999999999999999999999999999999999999999999999999865422     


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC-------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-------------  147 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~-------------  147 (503)
                       ......++..|+|||.+.+.  ..++.++|+|||||++|+|++|..||...+.......+......             
T Consensus       173 -~~~~~~~~~~y~aPE~~~~~--~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (345)
T cd07877         173 -EMTGYVATRWYRAPEIMLNW--MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES  249 (345)
T ss_pred             -cccccccCCCccCHHHHhCc--cCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHh
Confidence             22345678899999988642  25788999999999999999999999876654443333221110             


Q ss_pred             --------CC--------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          148 --------PP--------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       148 --------~~--------~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                              +.        .....++.+.++|.+||+.||.+||++.++++      ++++..
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~------h~~f~~  305 (345)
T cd07877         250 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA------HAYFAQ  305 (345)
T ss_pred             HHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc------Chhhhh
Confidence                    00        01245788999999999999999999999998      777654

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.92  E-value=6.2e-25  Score=232.14  Aligned_cols=181  Identities=22%  Similarity=0.394  Sum_probs=156.7

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||++. |.|..++.. .+..|+......|++||+.||+|||+.+++||||-..|||+.....+||+|||+++........
T Consensus       469 mEL~~~GELr~yLq~-nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yY  547 (974)
T KOG4257|consen  469 MELAPLGELREYLQQ-NKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYY  547 (974)
T ss_pred             EecccchhHHHHHHh-ccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccchh
Confidence            78998 899999986 5667999999999999999999999999999999999999999999999999999887553221


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                        ......-...|||||.+.   ...++.++|||.||+++||++. |..||.+-.+.+.+..+. .+.+++.|+.||+.+
T Consensus       548 --kaS~~kLPIKWmaPESIN---fRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iE-nGeRlP~P~nCPp~L  621 (974)
T KOG4257|consen  548 --KASRGKLPIKWMAPESIN---FRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIE-NGERLPCPPNCPPAL  621 (974)
T ss_pred             --hccccccceeecCccccc---hhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEec-CCCCCCCCCCCChHH
Confidence              111223346899999998   4478999999999999999987 999999988887776654 467888999999999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      ..|+.+||.+||.+||.+.++...|..+..
T Consensus       622 YslmskcWayeP~kRPrftei~~~lsdv~q  651 (974)
T KOG4257|consen  622 YSLMSKCWAYEPSKRPRFTEIKAILSDVLQ  651 (974)
T ss_pred             HHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence            999999999999999999999988877654

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.92  E-value=3.2e-26  Score=225.04  Aligned_cols=173  Identities=22%  Similarity=0.300  Sum_probs=147.4

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+ ||+.|.+.. ++.+|+++++..+++..++||+|||...-+|||||..|||++.+|.+||+|||.+-.+..   +
T Consensus       107 MEYCGAGSiSDI~R~-R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD---T  182 (502)
T KOG0574|consen  107 MEYCGAGSISDIMRA-RRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTD---T  182 (502)
T ss_pred             hhhcCCCcHHHHHHH-hcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhh---h
Confidence            89999 899999975 778899999999999999999999999999999999999999999999999999977654   2


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC--CCCCCCcHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP--PIPSGLPPA  157 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~--~~~~~~s~~  157 (503)
                      -...++.+|||.|||||++..-   .|+.++||||||++..||..|++||.+..+...+..+-. ..+|  .-|...+.+
T Consensus       183 MAKRNTVIGTPFWMAPEVI~EI---GY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT-~PPPTF~KPE~WS~~  258 (502)
T KOG0574|consen  183 MAKRNTVIGTPFWMAPEVIEEI---GYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPT-KPPPTFKKPEEWSSE  258 (502)
T ss_pred             HHhhCccccCcccccHHHHHHh---ccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccC-CCCCCCCChHhhhhH
Confidence            2334578999999999999843   588999999999999999999999988766544332221 1222  234678899


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          158 VENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +.++++.||.++|++|-|+.++++
T Consensus       259 F~DFi~~CLiK~PE~R~TA~~L~~  282 (502)
T KOG0574|consen  259 FNDFIRSCLIKKPEERKTALRLCE  282 (502)
T ss_pred             HHHHHHHHhcCCHHHHHHHHHHhh
Confidence            999999999999999999999887

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.91  E-value=9.7e-24  Score=201.46  Aligned_cols=172  Identities=27%  Similarity=0.421  Sum_probs=140.2

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||+++ +|.+++..  ...++...+..++.+++.+|.+||+.+++|+||+|.||+++.++.++|+|||.+.......  
T Consensus        66 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--  141 (244)
T smart00220       66 MEYCDGGDLFDLLKK--RGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--  141 (244)
T ss_pred             EeCCCCCCHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc--
Confidence            688887 99999864  2338999999999999999999999999999999999999999999999999987764321  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCC-CChHHHHHHHHhccCCCCCCCC-CcHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVRRQEIPPIPSG-LPPA  157 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~-~~~~e~~~~i~~~~~~~~~~~~-~s~~  157 (503)
                        ......++..|++||.+...   .++.++|+||||+++++|++|..||.. ...................... ++.+
T Consensus       142 --~~~~~~~~~~~~~pE~~~~~---~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (244)
T smart00220      142 --LLTTFVGTPEYMAPEVLLGK---GYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPE  216 (244)
T ss_pred             --ccccccCCcCCCCHHHHccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHH
Confidence              33455678899999998733   577899999999999999999999987 4444444444332222111111 8899


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          158 VENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +.+++.+|+..+|++||++.++++
T Consensus       217 ~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      217 AKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             HHHHHHHHccCCchhccCHHHHhh
Confidence            999999999999999999999998

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.91  E-value=7.8e-25  Score=221.44  Aligned_cols=177  Identities=17%  Similarity=0.183  Sum_probs=140.0

Q ss_pred             cCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEcc--------------------CCc
Q 010713            2 KFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE--------------------ADR   61 (503)
Q Consensus         2 Ey~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~--------------------~~~   61 (503)
                      |.++-|+.|+|..+...+++...++.+++||+++++|||+.+++|-||||+|||+.+                    +..
T Consensus       171 ellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~  250 (415)
T KOG0671|consen  171 ELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTA  250 (415)
T ss_pred             eccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcc
Confidence            445559999998777788999999999999999999999999999999999999942                    225


Q ss_pred             EEEEecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHH---HH
Q 010713           62 AVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE---IY  138 (503)
Q Consensus        62 vKL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e---~~  138 (503)
                      ++++|||.|....      ......+.|..|.|||++.+-   .++..+||||+||||+|++||...|+..+..+   +.
T Consensus       251 I~vIDFGsAtf~~------e~hs~iVsTRHYRAPEViLgL---GwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMM  321 (415)
T KOG0671|consen  251 IKVIDFGSATFDH------EHHSTIVSTRHYRAPEVILGL---GWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMM  321 (415)
T ss_pred             eEEEecCCcceec------cCcceeeeccccCCchheecc---CcCCccCceeeeeEEEEeeccceecccCCcHHHHHHH
Confidence            7899999987643      334567889999999999976   68999999999999999999999998876554   22


Q ss_pred             HHHHhc--------c--------CCCC-----------------CC--------CCCcHHHHHHHHHhhhcCCCCCCCHH
Q 010713          139 DAVVRR--------Q--------EIPP-----------------IP--------SGLPPAVENVLLGCFEYDLRSRPLMT  177 (503)
Q Consensus       139 ~~i~~~--------~--------~~~~-----------------~~--------~~~s~~l~~LI~~cL~~DP~~RPS~~  177 (503)
                      +.+...        .        ....                 .|        .....++.+||++||.+||.+|+|+.
T Consensus       322 erIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~  401 (415)
T KOG0671|consen  322 ERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLR  401 (415)
T ss_pred             HHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHH
Confidence            222210        0        0000                 00        11124578999999999999999999


Q ss_pred             HHHHHHHhhccCcCCC
Q 010713          178 DILRVFKSSQNSVHSD  193 (503)
Q Consensus       178 elL~~L~~i~~~~~~~  193 (503)
                      |++.      |+||..
T Consensus       402 EAL~------HpFF~~  411 (415)
T KOG0671|consen  402 EALS------HPFFAR  411 (415)
T ss_pred             HHhc------CHHhhc
Confidence            9998      888763

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.91  E-value=7.5e-24  Score=232.94  Aligned_cols=187  Identities=17%  Similarity=0.122  Sum_probs=129.9

Q ss_pred             CcCCC-CCHHHHHHhhcC------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEcc-CC
Q 010713            1 MKFYE-GSVGDRMAQLKG------------------GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE-AD   60 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~------------------~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~-~~   60 (503)
                      |||++ |+|.+++.....                  .......+..++.||+.||+|||+++|+||||||+|||++. ++
T Consensus       214 ~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~~~~  293 (566)
T PLN03225        214 WRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEGSG  293 (566)
T ss_pred             EEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeCCCC
Confidence            57888 489988864211                  01123456789999999999999999999999999999986 57


Q ss_pred             cEEEEecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCC-------------------CCCCccchHHHHHHHHH
Q 010713           61 RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRG-------------------PISFETDSWGFACSIIE  121 (503)
Q Consensus        61 ~vKL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~-------------------~~s~ksDIwSLGviLye  121 (503)
                      .+||+|||++.......  ........+++.|+|||.+......                   .++.++|||||||+|||
T Consensus       294 ~~KL~DFGlA~~l~~~~--~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~e  371 (566)
T PLN03225        294 SFKIIDLGAAADLRVGI--NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQ  371 (566)
T ss_pred             cEEEEeCCCcccccccc--ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHH
Confidence            89999999997653211  1223456789999999976422111                   23456799999999999


Q ss_pred             HHhCCCCCCCCChHHHHHHHHhccC----------CCC----------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          122 MLTGVQPRCGRSVDEIYDAVVRRQE----------IPP----------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       122 LltG~~Pf~~~~~~e~~~~i~~~~~----------~~~----------~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      |+++..++...  ...+........          ...          +....+....+||.+||++||++|||+.++++
T Consensus       372 l~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~  449 (566)
T PLN03225        372 MAFPNLRSDSN--LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALA  449 (566)
T ss_pred             HHhCcCCCchH--HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhC
Confidence            99977664322  111111111100          000          01112344568999999999999999999999


Q ss_pred             HHHhhccCcCCCCCCC
Q 010713          182 VFKSSQNSVHSDGGWT  197 (503)
Q Consensus       182 ~L~~i~~~~~~~~~w~  197 (503)
                            |+|+....+.
T Consensus       450 ------Hpff~~~~~~  459 (566)
T PLN03225        450 ------HPYFDREGLL  459 (566)
T ss_pred             ------CcCcCCCCcc
Confidence                  9999876654

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.91  E-value=3.8e-24  Score=228.54  Aligned_cols=177  Identities=24%  Similarity=0.341  Sum_probs=156.6

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||+++ |||.+.|...+...|-......|+.||+.|+.||.++++|||||-..|+|+.....+||+|||+.+.+......
T Consensus       189 ~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~  268 (1039)
T KOG0199|consen  189 FELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDM  268 (1039)
T ss_pred             hhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCCcc
Confidence            68888 79999998766788999999999999999999999999999999999999999999999999999887654433


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........-...|+|||.+.   +..++.++|+|+||++||||++ |+.||.+....++++.+- .+...+.|+.+++++
T Consensus       269 Yvm~p~rkvPfAWCaPEsLr---h~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD-~~erLpRPk~csedI  344 (1039)
T KOG0199|consen  269 YVMAPQRKVPFAWCAPESLR---HRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNID-AGERLPRPKYCSEDI  344 (1039)
T ss_pred             eEecCCCcCcccccCHhHhc---cccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcc-ccccCCCCCCChHHH
Confidence            32223334456899999998   5579999999999999999999 899999999999998886 667788899999999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHH
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      .+++..||..+|++||++..|.+
T Consensus       345 Y~imk~cWah~paDRptFsair~  367 (1039)
T KOG0199|consen  345 YQIMKNCWAHNPADRPTFSAIRE  367 (1039)
T ss_pred             HHHHHHhccCCccccccHHHHHH
Confidence            99999999999999999999974

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.90  E-value=2.1e-24  Score=229.18  Aligned_cols=171  Identities=22%  Similarity=0.317  Sum_probs=152.8

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||+- |.+++++.  +.+.+.+.++..++.|++.|++|||+++|+|||||.+|||++.+.++||+|||++..+..    
T Consensus       134 ~eya~~ge~~~yl~--~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~----  207 (596)
T KOG0586|consen  134 MEYASGGELFDYLV--KHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDY----  207 (596)
T ss_pred             EEeccCchhHHHHH--hcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeecc----
Confidence            78987 59999997  678888899999999999999999999999999999999999999999999999988754    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      .....+.+|++.|.|||++.+..  ...+.+|+||+|++||.|+.|..||.+.+..+.-..++...  ..++-.++.+++
T Consensus       208 ~~~lqt~cgsppyAaPEl~~g~~--y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk--~rIp~~ms~dce  283 (596)
T KOG0586|consen  208 GLMLQTFCGSPPYAAPELFNGKK--YDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGK--YRIPFYMSCDCE  283 (596)
T ss_pred             cccccccCCCCCccChHhhcCcc--cCCcceehhhhhhhheeeeecccccCCcccccccchheeee--ecccceeechhH
Confidence            34556889999999999999864  35689999999999999999999999988888777776644  446667899999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 010713          160 NVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ++|+++|..+|.+|++++++.+
T Consensus       284 ~lLrk~lvl~Pskr~~~dqim~  305 (596)
T KOG0586|consen  284 DLLRKFLVLNPSKRGPCDQIMK  305 (596)
T ss_pred             HHHHHhhccCccccCCHHHhhh
Confidence            9999999999999999999987

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.90  E-value=4.6e-23  Score=231.14  Aligned_cols=107  Identities=21%  Similarity=0.433  Sum_probs=89.0

Q ss_pred             cCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccC-CCCCCCCCcHHHHHHHHHh
Q 010713           87 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IPPIPSGLPPAVENVLLGC  165 (503)
Q Consensus        87 ~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~-~~~~~~~~s~~l~~LI~~c  165 (503)
                      +||+.|+|||++.+.   .++.++|||||||+||||++|+.||.+....+.+..+..... .+.....++..+.+++..|
T Consensus       541 vGT~~Y~APE~l~~~---~~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~l  617 (669)
T cd05610         541 LGTPDYLAPELLLGK---PHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPWPEGEEKLSVNAQNAIEIL  617 (669)
T ss_pred             eeCccccCHHHcCCC---CCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHH
Confidence            468899999999854   588999999999999999999999999888888777765332 2233356788999999999


Q ss_pred             hhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCCCCCc
Q 010713          166 FEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGHGSR  202 (503)
Q Consensus       166 L~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~~~~~  202 (503)
                      |..||.+||++.++++      ++|+...+|......
T Consensus       618 L~~dP~~R~ta~e~l~------h~~~~~~~~~~~~~~  648 (669)
T cd05610         618 LTMDPTKRAGLKELKQ------HPLFHGVDWENLQNQ  648 (669)
T ss_pred             cccChhHCcCHHHHHh------CHhhcCCCHHHhccc
Confidence            9999999999999998      888888777666443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.90  E-value=7.2e-24  Score=229.04  Aligned_cols=180  Identities=20%  Similarity=0.360  Sum_probs=157.3

Q ss_pred             cCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            2 KFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         2 Ey~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      ||++ |+|..+|.. ..+.++.-+...+++.|+.|+.||-++|++||||-..|||++.+-.+|++|||+++.+.+...  
T Consensus       710 EyMENGsLDsFLR~-~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~--  786 (996)
T KOG0196|consen  710 EYMENGSLDSFLRQ-NDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE--  786 (996)
T ss_pred             hhhhCCcHHHHHhh-cCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCCC--
Confidence            8998 899999986 567799999999999999999999999999999999999999999999999999997755331  


Q ss_pred             CCCCCccC--CCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHH
Q 010713           81 SDLPRRLG--TPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA  157 (503)
Q Consensus        81 ~~~~~~~G--t~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~  157 (503)
                      ...++.-|  ..+|.|||.+.   +.+++.++||||+|++|||.++ |..||.+.++.+.+..+.+. .+.+.|..+|..
T Consensus       787 ~~ytt~GGKIPiRWTAPEAIa---~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~g-yRLPpPmDCP~a  862 (996)
T KOG0196|consen  787 AAYTTLGGKIPIRWTAPEAIA---YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQG-YRLPPPMDCPAA  862 (996)
T ss_pred             ccccccCCccceeecChhHhh---hcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhc-cCCCCCCCCcHH
Confidence            11122222  36899999997   5579999999999999999887 99999999999999888664 556668899999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          158 VENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      |.+|+..||++|-.+||.+.+|+..|.++..
T Consensus       863 L~qLMldCWqkdR~~RP~F~qiV~~lDklIr  893 (996)
T KOG0196|consen  863 LYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR  893 (996)
T ss_pred             HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence            9999999999999999999999999998754

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.90  E-value=2.7e-23  Score=205.48  Aligned_cols=186  Identities=22%  Similarity=0.283  Sum_probs=147.7

Q ss_pred             CcCCCCCHHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC----CcEEEEecCCcccc
Q 010713            1 MKFYEGSVGDRMAQLK---GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA----DRAVLGDVGIPHLL   73 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~---~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~----~~vKL~DFGla~~~   73 (503)
                      +||.+-+|.+.++.+.   ...++...+..++.||+.|+.|||++-|+||||||.|||+..+    |.+||+|||+++.+
T Consensus       107 fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~  186 (438)
T KOG0666|consen  107 FDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLF  186 (438)
T ss_pred             ehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHh
Confidence            5889999999997653   4578999999999999999999999999999999999999877    89999999999988


Q ss_pred             cCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCh---------HHHHHHHHhc
Q 010713           74 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV---------DEIYDAVVRR  144 (503)
Q Consensus        74 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~---------~e~~~~i~~~  144 (503)
                      ...-.+-......+-|..|.|||.+.+..  .|+.+.|+|++|||+.||+|-++.|.+...         .++..+|..-
T Consensus       187 ~~plkpl~s~d~VVVTiWYRAPELLLGa~--hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~v  264 (438)
T KOG0666|consen  187 NNPLKPLASLDPVVVTIWYRAPELLLGAR--HYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEV  264 (438)
T ss_pred             hccccccccCCceEEEEEecChHHhcccc--cccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHH
Confidence            66443333445667789999999999863  799999999999999999999888765321         2334444432


Q ss_pred             cCCCC---------CC--------------------------CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          145 QEIPP---------IP--------------------------SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       145 ~~~~~---------~~--------------------------~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      ...|.         +|                          ..-++...+|+.+||.+||-+|.|+.+.++      +.
T Consensus       265 LG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAle------h~  338 (438)
T KOG0666|consen  265 LGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALE------HP  338 (438)
T ss_pred             cCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhc------cc
Confidence            22211         00                          112455778999999999999999999998      77


Q ss_pred             cCCCC
Q 010713          190 VHSDG  194 (503)
Q Consensus       190 ~~~~~  194 (503)
                      +|...
T Consensus       339 yF~~d  343 (438)
T KOG0666|consen  339 YFTED  343 (438)
T ss_pred             ccccC
Confidence            77653

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.89  E-value=2.6e-23  Score=206.41  Aligned_cols=175  Identities=20%  Similarity=0.255  Sum_probs=145.4

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++.+|.+.+.    -.++...+..+++|++.|+.|||+.||+||||||+||++..+..+||.|||+|+....    .
T Consensus       100 ~e~m~~nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~----~  171 (369)
T KOG0665|consen  100 MELMDANLCQVIL----MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDT----D  171 (369)
T ss_pred             HHhhhhHHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCc----c
Confidence            7899999999886    3477889999999999999999999999999999999999999999999999976432    2


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC-----------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-----------  149 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~-----------  149 (503)
                      -..+..+.|..|.|||++.+.   .+...+||||+||++.||++|...|.+.+.-+.+.++......+.           
T Consensus       172 ~~mtpyVvtRyyrapevil~~---~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~  248 (369)
T KOG0665|consen  172 FMMTPYVVTRYYRAPEVILGM---GYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTV  248 (369)
T ss_pred             cccCchhheeeccCchheecc---CCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHH
Confidence            345567889999999999864   488999999999999999999999998776666666554222210           


Q ss_pred             ------------------CC-----------CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          150 ------------------IP-----------SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       150 ------------------~~-----------~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                                        +|           ..-...+++++.+||..||++|.|+.++|+      |++..
T Consensus       249 r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~------HPY~~  314 (369)
T KOG0665|consen  249 RNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR------HPYIK  314 (369)
T ss_pred             HHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc------CCeee
Confidence                              01           122355889999999999999999999999      88876

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.89  E-value=2.8e-23  Score=200.37  Aligned_cols=183  Identities=19%  Similarity=0.252  Sum_probs=148.1

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCC-CC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP-LP   79 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~-~~   79 (503)
                      |++|+-+|.-++.. ...+++..++.+++.+++.||.|+|++.|+|||+|++|+||+.++.+||+|||+++.+.... ..
T Consensus       103 f~~cehDLaGlLsn-~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~  181 (376)
T KOG0669|consen  103 FDFCEHDLAGLLSN-RKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVV  181 (376)
T ss_pred             HHHhhhhHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccceecccccC
Confidence            57888889888864 45789999999999999999999999999999999999999999999999999997664332 12


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC------------
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI------------  147 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~------------  147 (503)
                      ....+..+-|..|.+||.+.+.  ..|+++.|+|+.||++.||+|+.+.+.+.+..+.+..|..-...            
T Consensus       182 kprytnrvvTLwYrppEllLG~--r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~l  259 (376)
T KOG0669|consen  182 KPRYTNRVVTLWYRPPELLLGD--REYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNL  259 (376)
T ss_pred             CCCcccceeeeecCCHHHhhcc--cccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccc
Confidence            2234456779999999999975  36899999999999999999999999988877766655421110            


Q ss_pred             --------CCCC-------------CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          148 --------PPIP-------------SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       148 --------~~~~-------------~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                              ++.+             -.-+++..+|+.++|..||.+|+++++++.      |.||.
T Consensus       260 pL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln------h~~F~  319 (376)
T KOG0669|consen  260 PLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN------HDFFW  319 (376)
T ss_pred             hHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc------hhhhh
Confidence                    1111             112457889999999999999999999998      66654

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.89  E-value=2.4e-24  Score=209.12  Aligned_cols=176  Identities=21%  Similarity=0.272  Sum_probs=140.4

Q ss_pred             CcCCCCCHHHHHH---hhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecccCCCcEEEccCCcEEEEecCCcccccCC
Q 010713            1 MKFYEGSVGDRMA---QLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~GSL~d~L~---~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~-gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~   76 (503)
                      ||+++-||..+..   ..++..++++-+-++..-.+.||.||-.. .|||||+||+|||++..|.+||||||++-.+.+ 
T Consensus       142 MELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~-  220 (361)
T KOG1006|consen  142 MELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD-  220 (361)
T ss_pred             HHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHH-
Confidence            7888876554443   33677899999999999999999999865 899999999999999999999999999876643 


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHhccCCC-CCC---
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR-SVDEIYDAVVRRQEIP-PIP---  151 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~-~~~e~~~~i~~~~~~~-~~~---  151 (503)
                         +...+...|...|||||.+..... .|+-++|+||||++|||+.||..||..- +..+++..+..+..+. ..+   
T Consensus       221 ---SiAkT~daGCrpYmAPERi~p~~~-gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~  296 (361)
T KOG1006|consen  221 ---SIAKTVDAGCRPYMAPERIDPSDK-GYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKEC  296 (361)
T ss_pred             ---HHHhhhccCCccccChhccCCccC-CcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccc
Confidence               223345678889999999986533 5899999999999999999999999763 3334444444432211 122   


Q ss_pred             CCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          152 SGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       152 ~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ..++..+..+|..||.+|-..||.+.++++
T Consensus       297 ~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  297 VHYSFSMVRFINTCLIKDRSDRPKYDDLKK  326 (361)
T ss_pred             cccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence            347899999999999999999999999988

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.89  E-value=5.1e-23  Score=217.33  Aligned_cols=181  Identities=20%  Similarity=0.380  Sum_probs=156.7

Q ss_pred             cCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            2 KFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         2 Ey~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      ||+. |+|.|+|.......++.-..+.++.||..|++||..+++|||||-..|.|+.++..+|++|||+++++.....+.
T Consensus       343 EfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTA  422 (1157)
T KOG4278|consen  343 EFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTA  422 (1157)
T ss_pred             ecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceec
Confidence            6665 999999988767778888999999999999999999999999999999999999999999999999886533211


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                        .....-...|.|||-+.   +..++.++|||+||++|||+.| |..||.+.+..+.|..+ ....+..-|..|++.+.
T Consensus       423 --HAGAKFPIKWTAPEsLA---yNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LL-EkgyRM~~PeGCPpkVY  496 (1157)
T KOG4278|consen  423 --HAGAKFPIKWTAPESLA---YNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLL-EKGYRMDGPEGCPPKVY  496 (1157)
T ss_pred             --ccCccCcccccCccccc---ccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHH-hccccccCCCCCCHHHH
Confidence              11222345899999987   5578999999999999999999 99999999998888755 45667778999999999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          160 NVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      +|++.||+..|.+||++.|+-+.|+.+.+
T Consensus       497 eLMraCW~WsPsDRPsFaeiHqafEtmf~  525 (1157)
T KOG4278|consen  497 ELMRACWNWSPSDRPSFAEIHQAFETMFS  525 (1157)
T ss_pred             HHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence            99999999999999999999999987754

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.89  E-value=1e-22  Score=225.89  Aligned_cols=181  Identities=17%  Similarity=0.331  Sum_probs=151.0

Q ss_pred             CcCCC-CCHHHHHHhhc------------C--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEE
Q 010713            1 MKFYE-GSVGDRMAQLK------------G--GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG   65 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~------------~--~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~   65 (503)
                      +|||. |+|.+++...+            .  ..|+..+.+.++.||+.|++||++..++||||-..|||+..+..+||+
T Consensus       381 ~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIa  460 (609)
T KOG0200|consen  381 VEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKVIKIA  460 (609)
T ss_pred             EEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEc
Confidence            58898 89999998644            0  138999999999999999999999999999999999999999999999


Q ss_pred             ecCCcccccCCCCCCCCCCCcc--CCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCC-hHHHHHHH
Q 010713           66 DVGIPHLLLGIPLPSSDLPRRL--GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRS-VDEIYDAV  141 (503)
Q Consensus        66 DFGla~~~~~~~~~~~~~~~~~--Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~-~~e~~~~i  141 (503)
                      |||+++..........  ....  -...|||||.+..   ..++.++||||||++|||+++ |..||.+.. ..+++. .
T Consensus       461 DFGlar~~~~~~~y~~--~~~~~~LP~kWmApEsl~~---~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~-~  534 (609)
T KOG0200|consen  461 DFGLARDHYNKDYYRT--KSSAGTLPVKWMAPESLFD---RVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLE-F  534 (609)
T ss_pred             cccceeccCCCCceEe--cCCCCccceeecCHHHhcc---CcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHH-H
Confidence            9999986433221110  1111  2346999999984   379999999999999999999 999999865 556655 5


Q ss_pred             HhccCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhc
Q 010713          142 VRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQ  187 (503)
Q Consensus       142 ~~~~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~  187 (503)
                      ...+.+...|..+++++.++++.||+.+|++||++.++.+.|+...
T Consensus       535 l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l  580 (609)
T KOG0200|consen  535 LKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL  580 (609)
T ss_pred             HhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence            5666777889999999999999999999999999999999998853

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.88  E-value=7.8e-23  Score=202.79  Aligned_cols=182  Identities=18%  Similarity=0.298  Sum_probs=144.2

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC---cEEEEecCCcccccCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD---RAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~---~vKL~DFGla~~~~~~   76 (503)
                      ||-+. |+|...+.  +...+++.++.+++.+|+.||.|||.+||.||||||+|||....+   -+||+||.+.......
T Consensus       155 fEKm~GGplLshI~--~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~  232 (463)
T KOG0607|consen  155 FEKMRGGPLLSHIQ--KRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLN  232 (463)
T ss_pred             EecccCchHHHHHH--HhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccC
Confidence            56666 58888887  567899999999999999999999999999999999999997665   4799999987554321


Q ss_pred             C----CCCCCCCCccCCCCCCCccccC---CCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC---------------h
Q 010713           77 P----LPSSDLPRRLGTPNYMAPEQWQ---PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS---------------V  134 (503)
Q Consensus        77 ~----~~~~~~~~~~Gt~~Y~APE~l~---~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~---------------~  134 (503)
                      .    .......+.+|+..|||||+..   ++ ...|+.++|.||||+|+|-|++|.+||.+.-               .
T Consensus       233 ~~~spastP~L~tPvGSAEfMAPEVVd~fv~q-A~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ  311 (463)
T KOG0607|consen  233 NDCSPASTPELLTPVGSAEFMAPEVVDVFVDQ-ATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQ  311 (463)
T ss_pred             CCCCCCCCccccCcccchhhcchhHHhhhccc-cccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHH
Confidence            1    1122344678999999999864   33 3368899999999999999999999997631               2


Q ss_pred             HHHHHHHHhccCCCCCC----CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          135 DEIYDAVVRRQEIPPIP----SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       135 ~e~~~~i~~~~~~~~~~----~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      ..++..|..+..  .+|    ..++.+.+++|..+|..|+.+|.++.++++      ++|...
T Consensus       312 ~~LFesIQEGkY--eFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln------hPw~~~  366 (463)
T KOG0607|consen  312 NKLFESIQEGKY--EFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN------HPWVQR  366 (463)
T ss_pred             HHHHHHHhccCC--cCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC------Cccccc
Confidence            345666665443  334    468999999999999999999999999888      777654

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.88  E-value=4.5e-23  Score=225.56  Aligned_cols=178  Identities=24%  Similarity=0.388  Sum_probs=152.6

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||. ||.-|++...++.++.+..+..|++.++.||.+||.+.++|||||-.|||++.++.+||+|||.+.....   +
T Consensus       100 MEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQlds---T  176 (953)
T KOG0587|consen  100 MEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDS---T  176 (953)
T ss_pred             eeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeeec---c
Confidence            89999 5999999988889999999999999999999999999999999999999999999999999999877644   3


Q ss_pred             CCCCCCccCCCCCCCccccCCC--CCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccC-CCCCCCCCcH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPE--VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IPPIPSGLPP  156 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~--~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~-~~~~~~~~s~  156 (503)
                      .....+.+|||.|||||++.+.  ....|+..+|+||||++-.||.-|.+|+.+..+...+-.+-.... ....|...++
T Consensus       177 ~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~  256 (953)
T KOG0587|consen  177 VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKKWSK  256 (953)
T ss_pred             cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCccccchhhHHH
Confidence            4445678999999999999754  233567889999999999999999999998877665544432111 1123567889


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          157 AVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ++.++|..||.+|..+||++.++++
T Consensus       257 ~FndFIs~cL~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  257 KFNDFISTCLVKDYEQRPSTEELLK  281 (953)
T ss_pred             HHHHHHHHHHhhccccCcchhhhcc
Confidence            9999999999999999999999987

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.88  E-value=2e-23  Score=227.40  Aligned_cols=182  Identities=22%  Similarity=0.276  Sum_probs=140.1

Q ss_pred             CcCCCCCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEcc---C--CcEEEEecCCcccc
Q 010713            1 MKFYEGSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE---A--DRAVLGDVGIPHLL   73 (503)
Q Consensus         1 MEy~~GSL~d~L~~~--~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~---~--~~vKL~DFGla~~~   73 (503)
                      .|.|..||.|+++..  .......-..+....|+++||++||+.+|+||||||.||||+.   +  ..++|+|||+++..
T Consensus       582 lELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl  661 (903)
T KOG1027|consen  582 LELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL  661 (903)
T ss_pred             ehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence            478999999999862  1111122456788999999999999999999999999999976   3  37899999999988


Q ss_pred             cCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHhccCCC-CCC
Q 010713           74 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG-VQPRCGRSVDEIYDAVVRRQEIP-PIP  151 (503)
Q Consensus        74 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG-~~Pf~~~~~~e~~~~i~~~~~~~-~~~  151 (503)
                      ......-.......||-+|+|||++...   .-+.++|||||||++|+.++| ..||.+....+.  .|....... .+.
T Consensus       662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~---~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~--NIl~~~~~L~~L~  736 (903)
T KOG1027|consen  662 AGGKSSFSRLSGGSGTSGWQAPEQLRED---RKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA--NILTGNYTLVHLE  736 (903)
T ss_pred             CCCcchhhcccCCCCcccccCHHHHhcc---ccCcccchhhcCceEEEEecCCccCCCchHHhhh--hhhcCccceeeec
Confidence            7665555556677899999999999865   446699999999999999995 999976543322  333322211 111


Q ss_pred             CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          152 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       152 ~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      .....+..+||.+|++++|..||++.+++.      |++|..
T Consensus       737 ~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~------HPlFW~  772 (903)
T KOG1027|consen  737 PLPDCEAKDLISRMLNPDPQLRPSATDVLN------HPLFWD  772 (903)
T ss_pred             cCchHHHHHHHHHhcCCCcccCCCHHHHhC------CCccCC
Confidence            222238999999999999999999999998      888753

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.88  E-value=1.6e-23  Score=217.98  Aligned_cols=172  Identities=23%  Similarity=0.294  Sum_probs=144.9

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC---CcEEEEecCCcccccCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA---DRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~---~~vKL~DFGla~~~~~~~   77 (503)
                      ||-+.|+..+.+.....++|++.....++.||+.||.|||-+||+|+||||+|||+...   -++||||||+|+.+..  
T Consensus       642 MEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE--  719 (888)
T KOG4236|consen  642 MEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE--  719 (888)
T ss_pred             ehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecch--
Confidence            88899998888887788999999999999999999999999999999999999999655   3799999999998865  


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc--CCCCCCCCCc
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ--EIPPIPSGLP  155 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~--~~~~~~~~~s  155 (503)
                        ..-..+.+|||.|+|||+++++   .|+..-|+||.|+|+|--++|..||....  ++-++|.+..  .++.....++
T Consensus       720 --ksFRrsVVGTPAYLaPEVLrnk---GyNrSLDMWSVGVIiYVsLSGTFPFNEdE--dIndQIQNAaFMyPp~PW~eis  792 (888)
T KOG4236|consen  720 --KSFRRSVVGTPAYLAPEVLRNK---GYNRSLDMWSVGVIIYVSLSGTFPFNEDE--DINDQIQNAAFMYPPNPWSEIS  792 (888)
T ss_pred             --hhhhhhhcCCccccCHHHHhhc---cccccccceeeeEEEEEEecccccCCCcc--chhHHhhccccccCCCchhhcC
Confidence              2334567899999999999854   68899999999999999999999996532  2333333222  2233347899


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          156 PAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +...+||..+|+..-++|.|++..+.
T Consensus       793 ~~AidlIn~LLqVkm~kRysvdk~ls  818 (888)
T KOG4236|consen  793 PEAIDLINNLLQVKMRKRYSVDKSLS  818 (888)
T ss_pred             HHHHHHHHHHHHHHHHHhcchHhhcc
Confidence            99999999999999999999988776

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.87  E-value=1.3e-22  Score=191.21  Aligned_cols=139  Identities=26%  Similarity=0.398  Sum_probs=114.7

Q ss_pred             CcCCCCCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecccCCCcEEEccCCcEEEEecCCcccccCCC
Q 010713            1 MKFYEGSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~GSL~d~L~~~--~~~~Ls~~~vl~i~~QIl~aL~yLHs~-gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~   77 (503)
                      ||.++-||..+..+.  +++.+++..+-+++..++.||.|||++ .++|||+||+||||+.+|++|+||||++-.+.+  
T Consensus       124 ME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~d--  201 (282)
T KOG0984|consen  124 MELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVD--  201 (282)
T ss_pred             HHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehh--
Confidence            677777776665543  578899999999999999999999987 899999999999999999999999999876643  


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCC-CCCCccchHHHHHHHHHHHhCCCCCCC-CChHHHHHHHHh
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRG-PISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVR  143 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~-~~s~ksDIwSLGviLyeLltG~~Pf~~-~~~~e~~~~i~~  143 (503)
                        +...+...|...|||||.+..+... .|+-++||||||+.+.||.+++.||.. .++-++..+++.
T Consensus       202 --SiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVe  267 (282)
T KOG0984|consen  202 --SIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVE  267 (282)
T ss_pred             --hhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhc
Confidence              2222335688899999999865433 689999999999999999999999975 455666666665

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.87  E-value=2.7e-22  Score=185.36  Aligned_cols=181  Identities=22%  Similarity=0.303  Sum_probs=152.3

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      +|||+.+|..++.. -++.++.+.+..++.|+++||.|+|++++.|||+||.|.+|+.+|.+||+|||+++.+.-   +.
T Consensus        80 fe~cdqdlkkyfds-lng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgi---pv  155 (292)
T KOG0662|consen   80 FEFCDQDLKKYFDS-LNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGI---PV  155 (292)
T ss_pred             HHHhhHHHHHHHHh-cCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCC---ce
Confidence            58999999999876 577899999999999999999999999999999999999999999999999999987643   33


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCC----------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPP----------  149 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~----------  149 (503)
                      ......+-|..|.+|.++.+..  -|+.+.|+||.||++.|+.. |++.|.+.+..++..++......+.          
T Consensus       156 rcysaevvtlwyrppdvlfgak--ly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~l  233 (292)
T KOG0662|consen  156 RCYSAEVVTLWYRPPDVLFGAK--LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKL  233 (292)
T ss_pred             EeeeceeeeeeccCcceeeeee--hhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccC
Confidence            3445567789999999998753  68899999999999999987 8888999999988888875332221          


Q ss_pred             --------CC---------CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          150 --------IP---------SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       150 --------~~---------~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                              ++         +.++..-++++.++|.-+|.+|.++++.++      +++|.+
T Consensus       234 pdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq------hpyf~d  288 (292)
T KOG0662|consen  234 PDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ------HPYFSD  288 (292)
T ss_pred             CCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc------Cccccc
Confidence                    11         234456789999999999999999999988      887764

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.87  E-value=4.6e-22  Score=209.53  Aligned_cols=182  Identities=15%  Similarity=0.241  Sum_probs=149.6

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++..+.-..+.-....+++.||+.|++||.+.+++||||.+.|+|++.++++||+|||+++.+...+. 
T Consensus       614 ~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~y-  692 (807)
T KOG1094|consen  614 TEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDY-  692 (807)
T ss_pred             HHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCc-
Confidence            57887 8999999865434456677888999999999999999999999999999999999999999999986544321 


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHhcc------CCCCCC
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT--GVQPRCGRSVDEIYDAVVRRQ------EIPPIP  151 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt--G~~Pf~~~~~~e~~~~i~~~~------~~~~~~  151 (503)
                      .......+-..+|||+|.+.   .++++.++|+|+||+++||+++  .+.||.....++..+....-.      ..+..|
T Consensus       693 y~vqgr~vlpiRwmawEsil---lgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P  769 (807)
T KOG1094|consen  693 YRVQGRAVLPIRWMAWESIL---LGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRP  769 (807)
T ss_pred             eeeecceeeeeeehhHHHHH---hccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCC
Confidence            11223345567999999987   4579999999999999999865  789999888877766654311      123467


Q ss_pred             CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhh
Q 010713          152 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSS  186 (503)
Q Consensus       152 ~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i  186 (503)
                      ..++..+.++|.+||..|-.+||+++++...|++.
T Consensus       770 ~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  770 PACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             CcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence            88999999999999999999999999999988764

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.87  E-value=8.3e-22  Score=203.88  Aligned_cols=187  Identities=22%  Similarity=0.316  Sum_probs=150.1

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---------CCeecccCCCcEEEccCCcEEEEecCCc
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK---------GILVLNLKPFNFILNEADRAVLGDVGIP   70 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~---------gIvHrDLKP~NILld~~~~vKL~DFGla   70 (503)
                      +||.+ |||.++|   +...+++.+..+++..|++||+|||+.         .|+|||||..|||+.++++..|+|||+|
T Consensus       287 t~fh~kGsL~dyL---~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA  363 (534)
T KOG3653|consen  287 TEFHPKGSLCDYL---KANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA  363 (534)
T ss_pred             eeeccCCcHHHHH---HhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence            45666 8999999   457799999999999999999999964         5999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCccCCCCCCCccccCCCCCCC---CCCccchHHHHHHHHHHHhCCC------------CCC-----
Q 010713           71 HLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGP---ISFETDSWGFACSIIEMLTGVQ------------PRC-----  130 (503)
Q Consensus        71 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~---~s~ksDIwSLGviLyeLltG~~------------Pf~-----  130 (503)
                      ..+.... +.......+||.+|||||++.+..+-.   .-.+.||||+|.+||||++...            ||.     
T Consensus       364 l~~~p~~-~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~  442 (534)
T KOG3653|consen  364 LRLEPGK-PQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGN  442 (534)
T ss_pred             EEecCCC-CCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcC
Confidence            8776432 233344579999999999997643211   1246899999999999998532            333     


Q ss_pred             CCChHHHHHHHHhccCCCCCCCC-----CcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcC
Q 010713          131 GRSVDEIYDAVVRRQEIPPIPSG-----LPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVH  191 (503)
Q Consensus       131 ~~~~~e~~~~i~~~~~~~~~~~~-----~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~  191 (503)
                      ..+.+++...++..+.+|.++..     ....+++.+..||..|++-|.|+.=+-+++.++.+...
T Consensus       443 hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~  508 (534)
T KOG3653|consen  443 HPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE  508 (534)
T ss_pred             CCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence            23456677777788888887743     34668999999999999999999999999988876553

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.87  E-value=6.2e-22  Score=213.12  Aligned_cols=182  Identities=23%  Similarity=0.332  Sum_probs=138.8

Q ss_pred             CcCCC-CCHHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC--C--cEEEEecCCccccc
Q 010713            1 MKFYE-GSVGDRMAQLK-GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA--D--RAVLGDVGIPHLLL   74 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~-~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~--~--~vKL~DFGla~~~~   74 (503)
                      ||||. |||...|.+-. ...|++.+.+.++.+++.||.|||++||+||||||.||++...  |  -.||+|||.|+...
T Consensus        96 mEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~  175 (732)
T KOG4250|consen   96 MEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELD  175 (732)
T ss_pred             EeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCC
Confidence            89999 59999997643 3579999999999999999999999999999999999999432  3  46899999999876


Q ss_pred             CCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHHhccC----
Q 010713           75 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS----VDEIYDAVVRRQE----  146 (503)
Q Consensus        75 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~----~~e~~~~i~~~~~----  146 (503)
                      .    .....+..||..|++||++..+  ..|+..+|.|||||++|+++||..||....    ..++...+..+..    
T Consensus       176 d----~s~~~S~vGT~~YLhPel~E~q--~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~  249 (732)
T KOG4250|consen  176 D----NSLFTSLVGTEEYLHPELYERQ--KKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVA  249 (732)
T ss_pred             C----CCeeeeecCchhhcChHHHhhc--cCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCcee
Confidence            5    4466788999999999999742  368899999999999999999999986432    2223333322111    


Q ss_pred             ---------------CCCCCCCCcHH----HHHHHHHhhhcCCCCCC--CHHHHHHHHHhhcc
Q 010713          147 ---------------IPPIPSGLPPA----VENVLLGCFEYDLRSRP--LMTDILRVFKSSQN  188 (503)
Q Consensus       147 ---------------~~~~~~~~s~~----l~~LI~~cL~~DP~~RP--S~~elL~~L~~i~~  188 (503)
                                     ..++|..+++.    +...+..+|..+|++|-  ...+....+..+.+
T Consensus       250 i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~  312 (732)
T KOG4250|consen  250 IGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILN  312 (732)
T ss_pred             EeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHh
Confidence                           12234444443    55678889999999998  65555555555433

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=1e-21  Score=201.34  Aligned_cols=179  Identities=17%  Similarity=0.265  Sum_probs=137.6

Q ss_pred             CcCCCCC-HHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecccCCCcEEEcc---CCcEEEEecCCccccc
Q 010713            1 MKFYEGS-VGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG--ILVLNLKPFNFILNE---ADRAVLGDVGIPHLLL   74 (503)
Q Consensus         1 MEy~~GS-L~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~g--IvHrDLKP~NILld~---~~~vKL~DFGla~~~~   74 (503)
                      +|||+|+ |.-+|.  ....+++.+++.|+.||+.||.||.+..  |||-||||.|||+..   .|.+||+|||+++.+.
T Consensus       547 LEYceGNDLDFYLK--QhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMd  624 (775)
T KOG1151|consen  547 LEYCEGNDLDFYLK--QHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMD  624 (775)
T ss_pred             eeecCCCchhHHHH--hhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhcc
Confidence            5999994 555554  5677999999999999999999999875  999999999999953   4789999999999876


Q ss_pred             CCCCCC----CCCCCccCCCCCCCccccC-CCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChH-HHHH--HHHhcc-
Q 010713           75 GIPLPS----SDLPRRLGTPNYMAPEQWQ-PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD-EIYD--AVVRRQ-  145 (503)
Q Consensus        75 ~~~~~~----~~~~~~~Gt~~Y~APE~l~-~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-e~~~--~i~~~~-  145 (503)
                      +.....    .......||..|++||++. +.....++.++||||+|+|+|+++.|+.||...... ++++  -|+... 
T Consensus       625 ddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtE  704 (775)
T KOG1151|consen  625 DDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATE  704 (775)
T ss_pred             CCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhccee
Confidence            533221    1123567999999999986 332335789999999999999999999999765433 2221  121111 


Q ss_pred             CCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          146 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       146 ~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ...+.-+.++++.++||++||++.-++|.+..++..
T Consensus       705 VqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~  740 (775)
T KOG1151|consen  705 VQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC  740 (775)
T ss_pred             ccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence            112233678999999999999999999999888766

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.86  E-value=9.7e-22  Score=202.12  Aligned_cols=184  Identities=20%  Similarity=0.305  Sum_probs=147.1

Q ss_pred             cCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeecccCCCcEEEccCCcEEEEecCCccc
Q 010713            2 KFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK--------GILVLNLKPFNFILNEADRAVLGDVGIPHL   72 (503)
Q Consensus         2 Ey~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~--------gIvHrDLKP~NILld~~~~vKL~DFGla~~   72 (503)
                      ||.+ |||+|+|.   ...++.+..++++..++.||+|||..        .|.|||||..|||+.+++...|+|+|+|..
T Consensus       289 dYHe~GSL~DyL~---r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~  365 (513)
T KOG2052|consen  289 DYHEHGSLYDYLN---RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR  365 (513)
T ss_pred             ecccCCcHHHHHh---hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEE
Confidence            6888 89999995   47899999999999999999999953        499999999999999999999999999977


Q ss_pred             ccCC-CCCCCCCCCccCCCCCCCccccCCCCCCCC---CCccchHHHHHHHHHHHhC----------CCCCCC-----CC
Q 010713           73 LLGI-PLPSSDLPRRLGTPNYMAPEQWQPEVRGPI---SFETDSWGFACSIIEMLTG----------VQPRCG-----RS  133 (503)
Q Consensus        73 ~~~~-~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~---s~ksDIwSLGviLyeLltG----------~~Pf~~-----~~  133 (503)
                      .... +.-....+..+||.+|||||++........   -..+||||||+++||++..          ++||.+     .+
T Consensus       366 h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs  445 (513)
T KOG2052|consen  366 HDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPS  445 (513)
T ss_pred             ecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCC
Confidence            6543 223344567899999999999975321111   1358999999999999763          578864     45


Q ss_pred             hHHHHHHHHhccCCCCCCCCCc-----HHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          134 VDEIYDAVVRRQEIPPIPSGLP-----PAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       134 ~~e~~~~i~~~~~~~~~~~~~s-----~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      .+++..-+...+.+|.+|....     ..+.++|+.||..+|.-|.|+--+.+.|.++.+
T Consensus       446 ~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~  505 (513)
T KOG2052|consen  446 FEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN  505 (513)
T ss_pred             HHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence            5566666666667777775433     447789999999999999999999999888764

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.86  E-value=6.3e-21  Score=206.39  Aligned_cols=185  Identities=15%  Similarity=0.108  Sum_probs=131.2

Q ss_pred             CcCCC-CCHHHHHHhhc----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEc
Q 010713            1 MKFYE-GSVGDRMAQLK----------------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN   57 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~----------------------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld   57 (503)
                      |||++ |+|.+++....                      ...+++..+..++.|++.+|.|||+++|+||||||+||+++
T Consensus       264 ~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~  343 (507)
T PLN03224        264 WKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVT  343 (507)
T ss_pred             EEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEEC
Confidence            57887 58988886321                      12345678899999999999999999999999999999999


Q ss_pred             cCCcEEEEecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCC-------------------CCCccchHHHHHH
Q 010713           58 EADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGP-------------------ISFETDSWGFACS  118 (503)
Q Consensus        58 ~~~~vKL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~-------------------~s~ksDIwSLGvi  118 (503)
                      .++.++|+|||++.......  ........+++.|+|||.+......+                   ...+.|+||+||+
T Consensus       344 ~~~~~kL~DFGla~~~~~~~--~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvi  421 (507)
T PLN03224        344 VDGQVKIIDFGAAVDMCTGI--NFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVL  421 (507)
T ss_pred             CCCcEEEEeCcCccccccCC--ccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHH
Confidence            99999999999986543211  11111234578999999875321100                   1234799999999


Q ss_pred             HHHHHhCCC-CCCCCChH-----------HHHHHHHhccCCCCCCCCCcHHHHHHHHHhhhcCC---CCCCCHHHHHHHH
Q 010713          119 IIEMLTGVQ-PRCGRSVD-----------EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDL---RSRPLMTDILRVF  183 (503)
Q Consensus       119 LyeLltG~~-Pf~~~~~~-----------e~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~DP---~~RPS~~elL~~L  183 (503)
                      +|+|+++.. ||.+....           ..+................++..++|+.+||..+|   .+|+|+.|+|+  
T Consensus       422 l~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~--  499 (507)
T PLN03224        422 LMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS--  499 (507)
T ss_pred             HHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC--
Confidence            999999875 66532111           11111111111222335678999999999999866   68999999999  


Q ss_pred             HhhccCcCCC
Q 010713          184 KSSQNSVHSD  193 (503)
Q Consensus       184 ~~i~~~~~~~  193 (503)
                          |+|+..
T Consensus       500 ----Hp~f~~  505 (507)
T PLN03224        500 ----HRFFLP  505 (507)
T ss_pred             ----CCCcCC
Confidence                888753

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.86  E-value=1.7e-21  Score=226.59  Aligned_cols=172  Identities=27%  Similarity=0.388  Sum_probs=129.1

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCeecccCCCcEEEccCCcEEEEecCCcccccCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLH---SKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLH---s~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~   76 (503)
                      |||++ |+|.+++.     .+++.++.+++.|+++||+|||   +.+|+||||||+||+++.++..++. |+....... 
T Consensus       762 ~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~-  834 (968)
T PLN00113        762 HEYIEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT-  834 (968)
T ss_pred             EeCCCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc-
Confidence            79998 59999985     3889999999999999999999   6699999999999999998887775 555433211 


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHH---hc-----cC
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV--DEIYDAVV---RR-----QE  146 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~--~e~~~~i~---~~-----~~  146 (503)
                            .....+++.|+|||++.+.   .++.++|||||||++|||+||+.||.....  ........   ..     ..
T Consensus       835 ------~~~~~~t~~y~aPE~~~~~---~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  905 (968)
T PLN00113        835 ------DTKCFISSAYVAPETRETK---DITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWI  905 (968)
T ss_pred             ------CCCccccccccCcccccCC---CCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhhee
Confidence                  1233678999999998743   688999999999999999999999854211  11111110   00     00


Q ss_pred             CCCC------CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          147 IPPI------PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       147 ~~~~------~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      .+..      +.....++.+++.+||+.||++||++.|+++.|+++..
T Consensus       906 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~  953 (968)
T PLN00113        906 DPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR  953 (968)
T ss_pred             CccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence            0111      11122357789999999999999999999999998754

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.85  E-value=4e-21  Score=208.57  Aligned_cols=182  Identities=20%  Similarity=0.354  Sum_probs=155.2

Q ss_pred             cCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            2 KFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         2 Ey~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      +|++ |+|.|+++. .+..+-.+..+.|.+||++|+.|||+++++||||-..|||+..-.++|+.|||+++.........
T Consensus       777 q~mP~G~LlDyvr~-hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey  855 (1177)
T KOG1025|consen  777 QLMPLGCLLDYVRE-HRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEY  855 (1177)
T ss_pred             HhcccchHHHHHHH-hhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcccccc
Confidence            5778 799999986 56779999999999999999999999999999999999999999999999999998875432111


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                       ......-.+.|||-|.+.   ..+|+.++||||||+++||++| |..||.+....++-+.+ +...+.+.|+.++.++.
T Consensus       856 -~~~~gK~pikwmale~i~---~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dll-e~geRLsqPpiCtiDVy  930 (1177)
T KOG1025|consen  856 -SAPGGKVPIKWMALESIR---IRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLL-EKGERLSQPPICTIDVY  930 (1177)
T ss_pred             -cccccccCcHHHHHHHhh---ccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHH-hccccCCCCCCccHHHH
Confidence             111222345788888887   4479999999999999999999 99999999988887655 44566888999999999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          160 NVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      .++.+||..|+..||+++++...+.+....
T Consensus       931 ~~mvkCwmid~~~rp~fkel~~~fs~~ard  960 (1177)
T KOG1025|consen  931 MVMVKCWMIDADSRPTFKELAEEFSRMARD  960 (1177)
T ss_pred             HHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence            999999999999999999999988887554

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.85  E-value=1.5e-21  Score=203.35  Aligned_cols=177  Identities=21%  Similarity=0.313  Sum_probs=142.2

Q ss_pred             cCCCCCHHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC-CcEEEEecCCcccccCCCCC
Q 010713            2 KFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA-DRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         2 Ey~~GSL~d~L~~~-~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~-~~vKL~DFGla~~~~~~~~~   79 (503)
                      |-+.-+|.++|... .+-.|....+..|+.||..||..|-..||+|.||||+|||+++. ..+||||||.|......   
T Consensus       514 E~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~en---  590 (752)
T KOG0670|consen  514 EPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFASEN---  590 (752)
T ss_pred             hhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCccccccccc---
Confidence            44456899999765 34568899999999999999999999999999999999999876 46899999999776442   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC----------
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP----------  149 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~----------  149 (503)
                        ..+.+.-+..|.|||++.+.   +|++..|+||.||+||||.||+..|.+.++.+++...+......+          
T Consensus       591 --eitPYLVSRFYRaPEIiLG~---~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~  665 (752)
T KOG0670|consen  591 --EITPYLVSRFYRAPEIILGL---PYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFK  665 (752)
T ss_pred             --cccHHHHHHhccCcceeecC---cccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchh
Confidence              33445567789999999976   799999999999999999999999999888777655543222110          


Q ss_pred             ---C---------------------------C-----------CCC-------cHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          150 ---I---------------------------P-----------SGL-------PPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       150 ---~---------------------------~-----------~~~-------s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                         +                           |           +.+       -..+++|+.+||..||++|.|..++|.
T Consensus       666 dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~  745 (752)
T KOG0670|consen  666 DQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALK  745 (752)
T ss_pred             hhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhc
Confidence               0                           0           011       145889999999999999999999988


Q ss_pred             HHHhhccCcCC
Q 010713          182 VFKSSQNSVHS  192 (503)
Q Consensus       182 ~L~~i~~~~~~  192 (503)
                            |+|+.
T Consensus       746 ------HpFi~  750 (752)
T KOG0670|consen  746 ------HPFIT  750 (752)
T ss_pred             ------CCccc
Confidence                  88764

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=1.9e-21  Score=189.45  Aligned_cols=162  Identities=18%  Similarity=0.227  Sum_probs=130.9

Q ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCCCCCCCccCCCCCCCc
Q 010713           16 KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAP   95 (503)
Q Consensus        16 ~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~AP   95 (503)
                      ....|+.+.+.-+++||++||.|||+.+|.||||||.|+|++.+..+||||||+++.....  ....++..+-|..|.||
T Consensus       149 SPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d--~~~hMTqEVVTQYYRAP  226 (449)
T KOG0664|consen  149 SPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQR--DRLNMTHEVVTQYYRAP  226 (449)
T ss_pred             cCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchh--hhhhhHHHHHHHHhccH
Confidence            3567899999999999999999999999999999999999999999999999999865432  12334455678899999


Q ss_pred             cccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC------------------------CCC
Q 010713           96 EQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------------------PIP  151 (503)
Q Consensus        96 E~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~------------------------~~~  151 (503)
                      |.+.+.  ..|+.+.||||.|||+.||+..+..|...++-+..+.+.+-...+                        ..+
T Consensus       227 EiLMGa--RhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~  304 (449)
T KOG0664|consen  227 ELLMGA--RRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQ  304 (449)
T ss_pred             HHhhcc--hhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCcc
Confidence            999975  369999999999999999999999998887777666655322211                        111


Q ss_pred             --------CCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          152 --------SGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       152 --------~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                              ..-..+...++..+|..||++|.+..+.+.
T Consensus       305 vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~  342 (449)
T KOG0664|consen  305 RLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQ  342 (449)
T ss_pred             ceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcc
Confidence                    122345667889999999999999999887

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.84  E-value=3.1e-20  Score=188.42  Aligned_cols=176  Identities=16%  Similarity=0.220  Sum_probs=148.0

Q ss_pred             CCHHHHHHhhc------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            6 GSVGDRMAQLK------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         6 GSL~d~L~~~~------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |+|..++..-+      ...++..+...++.|++.|++|||++|++|.||-..|.+|++.-++||+|=.+++.+...+..
T Consensus       373 gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYh  452 (563)
T KOG1024|consen  373 GNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYH  452 (563)
T ss_pred             chHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccchhccccCccccc
Confidence            78999987321      245788899999999999999999999999999999999999999999999988766443211


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      . .-........||+||.+.+.   .|+.++|+||||++||||+| |+.||...++.++...+.+ +.+...|-++|.++
T Consensus       453 c-LGDnEnRPvkWMslEal~n~---~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkd-GyRlaQP~NCPDeL  527 (563)
T KOG1024|consen  453 C-LGDNENRPVKWMSLEALQNS---HYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKD-GYRLAQPFNCPDEL  527 (563)
T ss_pred             c-cCCCCCCcccccCHHHHhhh---hhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhc-cceecCCCCCcHHH
Confidence            1 11112234589999999854   79999999999999999999 9999999999998877655 45667788999999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhh
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSS  186 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i  186 (503)
                      ..++.-||...|++||++.++...|.+.
T Consensus       528 f~vMacCWallpeeRPsf~Qlv~cLseF  555 (563)
T KOG1024|consen  528 FTVMACCWALLPEERPSFSQLVICLSEF  555 (563)
T ss_pred             HHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence            9999999999999999999999988764

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.83  E-value=2.4e-20  Score=178.15  Aligned_cols=163  Identities=17%  Similarity=0.289  Sum_probs=128.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC-CcEEEEecCCcccccCCCCCCCCCCCccCCCCCCCcc
Q 010713           18 GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA-DRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPE   96 (503)
Q Consensus        18 ~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~-~~vKL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE   96 (503)
                      ..|+.-++..++.|+++||.|+|++||+|||+||.|++|+.. ..++|+|+|+|.++..    ....+-.+.+..|--||
T Consensus       127 ~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp----~~eYnVRVASRyfKGPE  202 (338)
T KOG0668|consen  127 PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP----GKEYNVRVASRYFKGPE  202 (338)
T ss_pred             hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCC----CceeeeeeehhhcCCch
Confidence            457888999999999999999999999999999999999865 4799999999988754    44455667888999999


Q ss_pred             ccCCCCCCCCCCccchHHHHHHHHHHHhCCCCC-CCCChHHHHHHHHhcc---------------CCCC-----------
Q 010713           97 QWQPEVRGPISFETDSWGFACSIIEMLTGVQPR-CGRSVDEIYDAVVRRQ---------------EIPP-----------  149 (503)
Q Consensus        97 ~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf-~~~~~~e~~~~i~~~~---------------~~~~-----------  149 (503)
                      .+..  ...|+.+-|+|||||++..|+..+.|| .+.++.++.-++..-.               ..+.           
T Consensus       203 LLVd--y~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk  280 (338)
T KOG0668|consen  203 LLVD--YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRK  280 (338)
T ss_pred             heee--chhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccc
Confidence            9975  346889999999999999999988886 4555444433332100               0000           


Q ss_pred             ---------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          150 ---------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       150 ---------~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                               -..-.++++.+|+.++|.+|-++|+|+.|.+.      |++|.
T Consensus       281 ~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~------HpyF~  326 (338)
T KOG0668|consen  281 PWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA------HPYFA  326 (338)
T ss_pred             cHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc------CchHH
Confidence                     01224689999999999999999999999988      76664

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.81  E-value=1.8e-19  Score=166.95  Aligned_cols=143  Identities=32%  Similarity=0.547  Sum_probs=121.8

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEcc-CCcEEEEecCCcccccCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE-ADRAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~-~~~vKL~DFGla~~~~~~~~   78 (503)
                      |||++ ++|.+++... ...++...+..++.+++.+|++||++|++|+||+|.||+++. ++.++|+||+.+........
T Consensus        70 ~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~  148 (215)
T cd00180          70 MEYCEGGSLKDLLKEN-EGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS  148 (215)
T ss_pred             EecCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc
Confidence            68898 5999998642 247899999999999999999999999999999999999999 89999999999876543211


Q ss_pred             CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           79 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        79 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                         ......+...|++||.+...  ..++.++|+|+||+++++|                                 ..+
T Consensus       149 ---~~~~~~~~~~~~~pe~~~~~--~~~~~~~D~~~lg~~~~~l---------------------------------~~~  190 (215)
T cd00180         149 ---LLKTIVGTPAYMAPEVLLGK--GYYSEKSDIWSLGVILYEL---------------------------------PEL  190 (215)
T ss_pred             ---hhhcccCCCCccChhHhccc--CCCCchhhhHHHHHHHHHH---------------------------------HHH
Confidence               12345678899999998643  2567889999999999999                                 789


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHH
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRV  182 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~  182 (503)
                      .+++.+|++.+|++||++.++++.
T Consensus       191 ~~~l~~~l~~~p~~R~~~~~l~~~  214 (215)
T cd00180         191 KDLIRKMLQKDPEKRPSAKEILEH  214 (215)
T ss_pred             HHHHHHHhhCCcccCcCHHHHhhC
Confidence            999999999999999999999873

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.81  E-value=1.1e-19  Score=177.20  Aligned_cols=171  Identities=20%  Similarity=0.275  Sum_probs=127.6

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC--CcEEEEecCCcccccCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA--DRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~--~~vKL~DFGla~~~~~~~   77 (503)
                      |||++ |+|.+-+   ....+-+....+++.|+++||.|+|+++++|||||.+||||-..  .++||||||......   
T Consensus       101 qE~aP~gdL~snv---~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g---  174 (378)
T KOG1345|consen  101 QEFAPRGDLRSNV---EAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVG---  174 (378)
T ss_pred             eccCccchhhhhc---CcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccC---
Confidence            68998 8888777   44668899999999999999999999999999999999999433  489999999876542   


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCC--CCCCccchHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHhccCCCCCC
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRG--PISFETDSWGFACSIIEMLTGVQPRCGRSVDE----IYDAVVRRQEIPPIP  151 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~--~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e----~~~~i~~~~~~~~~~  151 (503)
                         ......--+..|.+||.+.-...+  ...+.+|+|.||+++|.++||.+||+.....+    .+.+.. +...+..|
T Consensus       175 ---~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~-~rk~~~~P  250 (378)
T KOG1345|consen  175 ---TTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWL-KRKNPALP  250 (378)
T ss_pred             ---ceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHh-cccCccCc
Confidence               222333446688999987532222  34678999999999999999999998432221    111111 22223333


Q ss_pred             ---CCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          152 ---SGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       152 ---~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                         ..+++.+..+.++-|..+|++|--..+..+
T Consensus       251 ~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk  283 (378)
T KOG1345|consen  251 KKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKK  283 (378)
T ss_pred             hhhcccCHHHHHHHHHhcCCcccccchhHHHHH
Confidence               567899999999999999999965555544

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.79  E-value=1.2e-19  Score=200.24  Aligned_cols=185  Identities=18%  Similarity=0.167  Sum_probs=145.5

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC-
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP-   79 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~-   79 (503)
                      ||||+++|..++.  ..+.++..++..++.|++.|+.|||+.||.|||||++|++++.++.+||+|||.+..+...... 
T Consensus       400 mE~~~~Dlf~~~~--~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~  477 (601)
T KOG0590|consen  400 MEYCPYDLFSLVM--SNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKN  477 (601)
T ss_pred             hhcccHHHHHHHh--cccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchh
Confidence            8999999999886  3468999999999999999999999999999999999999999999999999998765432111 


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHH--HHHHh-----ccCCCCCCC
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIY--DAVVR-----RQEIPPIPS  152 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~--~~i~~-----~~~~~~~~~  152 (503)
                      .......+|+..|+|||.+.+....  ....||||.|++++.|++|+.||.-....+..  .....     ......+..
T Consensus       478 ~~~~~g~~gS~pY~apE~~~~~~yd--pr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~  555 (601)
T KOG0590|consen  478 IHESSGIVGSDPYLAPEVLTGKEYD--PRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLS  555 (601)
T ss_pred             hhhhcCcccCCcCcCcccccccccC--cchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHH
Confidence            1334567899999999999865322  35689999999999999999999754433221  11110     011122335


Q ss_pred             CCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCC
Q 010713          153 GLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGG  195 (503)
Q Consensus       153 ~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~  195 (503)
                      .++...+.+|.+||+.||.+|.|+.+|++      .+|+..+.
T Consensus       556 ~lp~~~~~~~~~~l~~~P~~R~ti~~i~~------d~W~~~i~  592 (601)
T KOG0590|consen  556 LLPRETRIIIYRMLQLDPTKRITIEQILN------DEWIRSIE  592 (601)
T ss_pred             hchhhHHHHHHHHccCChhheecHHHHhh------ChHhhhcc
Confidence            67889999999999999999999999998      66655443

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.78  E-value=1.7e-19  Score=192.86  Aligned_cols=176  Identities=23%  Similarity=0.309  Sum_probs=146.7

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+| +|.|...  -.+++++.++...+++.++||+|||++|-+|||||-.||++++.|.+|++|||.+..+..   .
T Consensus        91 MEycgggslQdiy~--~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqita---t  165 (829)
T KOG0576|consen   91 MEYCGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITA---T  165 (829)
T ss_pred             EEecCCCcccceee--ecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhh---h
Confidence            899995 8888775  678999999999999999999999999999999999999999999999999998876643   2


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC---CCCCCcH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP---IPSGLPP  156 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~---~~~~~s~  156 (503)
                      -.....++||+.|||||+..-+..+.|...+|+|++|+.-.|+-.-++|-.+..+.+....+......++   -+...++
T Consensus       166 i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~  245 (829)
T KOG0576|consen  166 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSE  245 (829)
T ss_pred             hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchH
Confidence            2334578999999999998755567899999999999999999988888766666655544444333332   2356789


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          157 AVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      .+.+|++.||.++|.+||++..++.
T Consensus       246 ~fh~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  246 FFHNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             HHHHHHHHHhcCCCccCCChhhhee
Confidence            9999999999999999999877654

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.75  E-value=9.2e-18  Score=159.27  Aligned_cols=137  Identities=27%  Similarity=0.356  Sum_probs=111.0

Q ss_pred             CcCCCC-CHHHHHHhhcCCC-CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGK-LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~-Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~   78 (503)
                      |||+++ +|.+++...  .. +++..+..++.+++.+|.+||+++++|+||+|.||+++.++.++|+|||.+....... 
T Consensus        76 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~-  152 (225)
T smart00221       76 MEYCEGGDLFDYLRKK--GGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDL-  152 (225)
T ss_pred             EeccCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc-
Confidence            688887 999998742  33 8999999999999999999999999999999999999999999999999987764321 


Q ss_pred             CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCC-CChH-HHHHHHHh
Q 010713           79 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVD-EIYDAVVR  143 (503)
Q Consensus        79 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~-~~~~-e~~~~i~~  143 (503)
                       ........++..|++||.+.  ....++.++|+|+||+++++|++|+.||.. .... ++.+.+..
T Consensus       153 -~~~~~~~~~~~~~~~pe~~~--~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~  216 (225)
T smart00221      153 -AALLKTVKGTPFYLAPEVLL--GGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSF  216 (225)
T ss_pred             -cccccceeccCCcCCHhHhc--CCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhc
Confidence             01223456788999999984  134677899999999999999999999977 3444 45555443

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.74  E-value=1.3e-17  Score=173.30  Aligned_cols=57  Identities=25%  Similarity=0.275  Sum_probs=52.6

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecccCCCcEEEc
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILN   57 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~-gIvHrDLKP~NILld   57 (503)
                      +|+++-+|..+|.+.....++...+..|++||+.||.|||.. ||||-||||+|||+.
T Consensus       165 fEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~  222 (590)
T KOG1290|consen  165 FEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC  222 (590)
T ss_pred             ehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence            578888999999987788899999999999999999999965 999999999999993

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.74  E-value=4.2e-17  Score=167.44  Aligned_cols=186  Identities=20%  Similarity=0.231  Sum_probs=143.8

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC-----CcEEEEecCCcc--cc
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA-----DRAVLGDVGIPH--LL   73 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~-----~~vKL~DFGla~--~~   73 (503)
                      |+.++-||.++......+.++..++++++.|++.+|++||+.|++||||||+|+++...     ..+.|.|||+++  .+
T Consensus       100 M~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~  179 (322)
T KOG1164|consen  100 MSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKY  179 (322)
T ss_pred             EeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccc
Confidence            56777799999876666899999999999999999999999999999999999999765     368999999998  33


Q ss_pred             cCCC----CCCCC-CCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc---c
Q 010713           74 LGIP----LPSSD-LPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR---Q  145 (503)
Q Consensus        74 ~~~~----~~~~~-~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~---~  145 (503)
                      ....    ..... .....||..|+++.+..+.   ..+++.|+||++.++.+++.|..||...............   .
T Consensus       180 ~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~---e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~  256 (322)
T KOG1164|consen  180 VGDSGGNLRPPRPQKGLFRGTLRYASINVHLGI---EQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKL  256 (322)
T ss_pred             cCCCCcccccCCCCccCCCCccccccHHHhCCC---ccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhh
Confidence            2211    11111 2345699999999998865   5788999999999999999999999775533222222221   1


Q ss_pred             CCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          146 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       146 ~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      .........+.++.++...+-..+...+|.+..+...|+.....
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~  300 (322)
T KOG1164|consen  257 LTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS  300 (322)
T ss_pred             ccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence            11113345668888888888889999999999999988776543

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.72  E-value=1.9e-17  Score=169.84  Aligned_cols=181  Identities=24%  Similarity=0.381  Sum_probs=129.8

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC-CcEEEEecCCcccccCCC-
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA-DRAVLGDVGIPHLLLGIP-   77 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~-~~vKL~DFGla~~~~~~~-   77 (503)
                      |||++- ...+++.     .++..++..|++.++.||+++|++||+||||||.|+|.+.. +.-.|+|||+|....... 
T Consensus       114 lp~~~H~~f~~l~~-----~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~  188 (418)
T KOG1167|consen  114 LPYFEHDRFRDLYR-----SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQ  188 (418)
T ss_pred             ecccCccCHHHHHh-----cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhhhh
Confidence            577775 5555553     37799999999999999999999999999999999999755 677899999997211000 


Q ss_pred             -------------C---------------------------CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHH
Q 010713           78 -------------L---------------------------PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFAC  117 (503)
Q Consensus        78 -------------~---------------------------~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGv  117 (503)
                                   .                           .........||++|.|||++..-  ...+.+.||||.|+
T Consensus       189 ~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~--~~QttaiDiws~GV  266 (418)
T KOG1167|consen  189 TEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRC--PRQTTAIDIWSAGV  266 (418)
T ss_pred             hhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhc--cCcCCccceeeccc
Confidence                         0                           00001134699999999999753  34578999999999


Q ss_pred             HHHHHHhCCCCCCCCChH-HHHHHHH------------h--cc-------------------CCC---------------
Q 010713          118 SIIEMLTGVQPRCGRSVD-EIYDAVV------------R--RQ-------------------EIP---------------  148 (503)
Q Consensus       118 iLyeLltG~~Pf~~~~~~-e~~~~i~------------~--~~-------------------~~~---------------  148 (503)
                      |++.++++..||-....+ .....+.            .  +.                   ...               
T Consensus       267 I~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~  346 (418)
T KOG1167|consen  267 ILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTER  346 (418)
T ss_pred             eeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceee
Confidence            999999999997532111 0000000            0  00                   000               


Q ss_pred             -CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCC
Q 010713          149 -PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDG  194 (503)
Q Consensus       149 -~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~  194 (503)
                       ......+..+.+|+.+||+.||.+|.|+++.|+      |+||...
T Consensus       347 ~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk------HpFF~~~  387 (418)
T KOG1167|consen  347 EIGSDVFPALLLDLLDKCLELNPQKRITAEDALK------HPFFDEA  387 (418)
T ss_pred             ccccccccHHHHHHHHHHccCChhhcccHHHHhc------CcCCcch
Confidence             011234568899999999999999999999998      9988743

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.71  E-value=1.1e-17  Score=179.18  Aligned_cols=189  Identities=23%  Similarity=0.282  Sum_probs=152.4

Q ss_pred             cCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            2 KFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         2 Ey~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      +|+.| .|...+.  +...+.+.....+...++.+++++|+.+|+|||+|++||+++.+|++++.|||+++..-..    
T Consensus        77 d~~rgg~lft~l~--~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~----  150 (612)
T KOG0603|consen   77 DFLRGGDLFTRLS--KEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKE----  150 (612)
T ss_pred             hhcccchhhhccc--cCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhh----
Confidence            44443 4444443  4556788899999999999999999999999999999999999999999999999876431    


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHHH
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVEN  160 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~~  160 (503)
                         ...+||..|||||++.     ....++|.||||++.++|+||..||..    ++...|..  ..+.+|..++..+++
T Consensus       151 ---~~~cgt~eymApEI~~-----gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~--~~~~~p~~l~~~a~~  216 (612)
T KOG0603|consen  151 ---KIACGTYEYRAPEIIN-----GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILK--AELEMPRELSAEARS  216 (612)
T ss_pred             ---hhcccchhhhhhHhhh-----ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhh--hccCCchhhhHHHHH
Confidence               1228999999999997     356789999999999999999999987    45555544  345678899999999


Q ss_pred             HHHHhhhcCCCCCCCHH-HHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCC
Q 010713          161 VLLGCFEYDLRSRPLMT-DILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGY  212 (503)
Q Consensus       161 LI~~cL~~DP~~RPS~~-elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~  212 (503)
                      ++..++..+|.+|.-.. +.+..  ...+.++..++|..+..+..++|.+|..
T Consensus       217 ~~~~l~~r~p~nrLg~~~~~~~e--ik~h~f~~~i~~~~l~~r~~~~~fkp~~  267 (612)
T KOG0603|consen  217 LFRQLFKRNPENRLGAGPDGVDE--IKQHEFFQSIDWNELEARSRPPPFKPGS  267 (612)
T ss_pred             HHHHHHhhCHHHHhccCcchhHH--HhccchheeeeHhhHhhcCCCCCCCCcc
Confidence            99999999999997442 22221  1238999999999998888888887763

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.69  E-value=5.8e-16  Score=150.45  Aligned_cols=182  Identities=26%  Similarity=0.361  Sum_probs=137.8

Q ss_pred             CcCCCC-CHHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC-cEEEEecCCcccccCCC
Q 010713            1 MKFYEG-SVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD-RAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~-~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~-~vKL~DFGla~~~~~~~   77 (503)
                      |||+.| ++.+++..... ..++......++.|++.++.|+|+.+++|||+||+||+++..+ .++++|||++.......
T Consensus        77 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~  156 (384)
T COG0515          77 MEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG  156 (384)
T ss_pred             EecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence            578885 77766653211 2799999999999999999999999999999999999999988 79999999987554322


Q ss_pred             CCC---CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHhccCC-C-
Q 010713           78 LPS---SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV----DEIYDAVVRRQEI-P-  148 (503)
Q Consensus        78 ~~~---~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~----~e~~~~i~~~~~~-~-  148 (503)
                      ...   .......++..|++||.+.+.....++...|+||+|++++++++|..||.....    ......+...... . 
T Consensus       157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (384)
T COG0515         157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLA  236 (384)
T ss_pred             ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccc
Confidence            211   134577899999999999752103577899999999999999999999877653    3444444332221 1 


Q ss_pred             -CCCCCC----cHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 010713          149 -PIPSGL----PPAVENVLLGCFEYDLRSRPLMTDILRV  182 (503)
Q Consensus       149 -~~~~~~----s~~l~~LI~~cL~~DP~~RPS~~elL~~  182 (503)
                       ......    ...+.+++..|+..+|..|.+..+....
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         237 SPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             cccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence             111222    2579999999999999999998887763

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.69  E-value=1.7e-17  Score=175.25  Aligned_cols=116  Identities=20%  Similarity=0.246  Sum_probs=104.0

Q ss_pred             CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCCCCCCCc
Q 010713            7 SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR   86 (503)
Q Consensus         7 SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~   86 (503)
                      +|+|+++  .+..+++.++.-|+.|++.|+++||++||+|||||-+|+.++.+|-+||+|||.+.....     .....+
T Consensus       656 DLFd~IE--~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~ks-----gpfd~f  728 (772)
T KOG1152|consen  656 DLFDFIE--FKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKS-----GPFDVF  728 (772)
T ss_pred             chhhhhh--ccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccchhhhcC-----CCccee
Confidence            8999998  577899999999999999999999999999999999999999999999999999877643     345678


Q ss_pred             cCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCC
Q 010713           87 LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG  131 (503)
Q Consensus        87 ~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~  131 (503)
                      .||..|.|||++.++.+  ....-|||+||++||.++....||++
T Consensus       729 ~gtv~~aapevl~g~~y--~gk~qdiwalgillytivykenpyyn  771 (772)
T KOG1152|consen  729 VGTVDYAAPEVLGGEKY--LGKPQDIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             eeeccccchhhhCCCcc--CCCcchhhhhhheeeEEEeccCCCcC
Confidence            99999999999997632  35678999999999999999999864

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.68  E-value=5.1e-17  Score=181.69  Aligned_cols=177  Identities=17%  Similarity=0.187  Sum_probs=127.7

Q ss_pred             CCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCCCC
Q 010713            3 FYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSD   82 (503)
Q Consensus         3 y~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~~~   82 (503)
                      |...+|+|.+.  ...-|..-+...|+.||+.||..+|..||+|||||.+||||+.-+-+.|+||...+...-....+..
T Consensus       102 yvkhnLyDRlS--TRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPad  179 (1431)
T KOG1240|consen  102 YVKHNLYDRLS--TRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPAD  179 (1431)
T ss_pred             HHhhhhhhhhc--cchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCccc
Confidence            55568888886  4566788899999999999999999999999999999999999999999999876543222222233


Q ss_pred             CCCccC----CCCCCCccccCCC--------CCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-cCCC
Q 010713           83 LPRRLG----TPNYMAPEQWQPE--------VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR-QEIP  148 (503)
Q Consensus        83 ~~~~~G----t~~Y~APE~l~~~--------~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~-~~~~  148 (503)
                      ...+..    -..|+|||.+...        .....+++.||||+||++.||++ |++||.-   .+++. .... ...+
T Consensus       180 f~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L---SQL~a-Yr~~~~~~~  255 (1431)
T KOG1240|consen  180 FTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL---SQLLA-YRSGNADDP  255 (1431)
T ss_pred             ceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH---HHHHh-HhccCccCH
Confidence            333333    3479999988641        11126789999999999999998 7888842   11111 1110 0000


Q ss_pred             C--CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHh
Q 010713          149 P--IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  185 (503)
Q Consensus       149 ~--~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~  185 (503)
                      .  +...-+..+++||..|++.||.+|.++++.|+.-..
T Consensus       256 e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG  294 (1431)
T KOG1240|consen  256 EQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQKYRG  294 (1431)
T ss_pred             HHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence            0  112234589999999999999999999999985443

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.68  E-value=4.5e-16  Score=155.81  Aligned_cols=196  Identities=19%  Similarity=0.278  Sum_probs=157.5

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC-----CcEEEEecCCcccccC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA-----DRAVLGDVGIPHLLLG   75 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~-----~~vKL~DFGla~~~~~   75 (503)
                      ||++.-||.|++.- .+.+++..++..++.||+.-++|+|++.+|.|||||+|+||...     ..+.++|||+|+.+.+
T Consensus       103 idLLGPSLEDLFD~-CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrD  181 (449)
T KOG1165|consen  103 IDLLGPSLEDLFDL-CGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRD  181 (449)
T ss_pred             hhhhCcCHHHHHHH-hcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcC
Confidence            57777799999974 78899999999999999999999999999999999999999654     3688999999998755


Q ss_pred             CC----CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCC---ChHHHHHHHHhccCCC
Q 010713           76 IP----LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR---SVDEIYDAVVRRQEIP  148 (503)
Q Consensus        76 ~~----~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~---~~~e~~~~i~~~~~~~  148 (503)
                      ..    .+.....+..||..||+-....+.   .-+.+.|+=|||-++++.|.|..||.+.   +..+.+++|-..+...
T Consensus       182 p~TkqHIPYrE~KSLsGTARYMSINTHlGr---EQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T  258 (449)
T KOG1165|consen  182 PKTKQHIPYREHKSLSGTARYMSINTHLGR---EQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRST  258 (449)
T ss_pred             ccccccCccccccccccceeeeEeeccccc---hhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccC
Confidence            32    233445567899999999888865   5678899999999999999999999985   4556677765544433


Q ss_pred             C---CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccC----cCCCCCCCCCC
Q 010713          149 P---IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNS----VHSDGGWTGHG  200 (503)
Q Consensus       149 ~---~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~----~~~~~~w~~~~  200 (503)
                      +   +..++|.++..-+.-.-..+..+-|+++-+...|.++...    ....-||..+.
T Consensus       259 ~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~g~t~Dg~yDW~~ln  317 (449)
T KOG1165|consen  259 PIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRLGETDDGEYDWMGLN  317 (449)
T ss_pred             CHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhcCCcccccccccccC
Confidence            3   2367889999999999899999999999888877666543    33345665554

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.68  E-value=2.7e-16  Score=160.41  Aligned_cols=180  Identities=21%  Similarity=0.268  Sum_probs=134.6

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEc--cCC--cEEEEecCCcccccCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN--EAD--RAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld--~~~--~vKL~DFGla~~~~~~   76 (503)
                      |.-++.+|.+++.   ....+.....-++.|+++|+.|||++||.|||+|.+|||+.  +++  .+.++|||++-.-...
T Consensus       322 MkrY~~tLr~yl~---~~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~h  398 (598)
T KOG4158|consen  322 MKRYRQTLREYLW---TRHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNH  398 (598)
T ss_pred             hhcchhhHHHHHh---cCCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeecccc
Confidence            5556778888884   45678888999999999999999999999999999999993  333  5789999987432221


Q ss_pred             --CCCCCC-CCCccCCCCCCCccccCCCCCCCC----CCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC
Q 010713           77 --PLPSSD-LPRRLGTPNYMAPEQWQPEVRGPI----SFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP  149 (503)
Q Consensus        77 --~~~~~~-~~~~~Gt~~Y~APE~l~~~~~~~~----s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~  149 (503)
                        ..+... .-..-|.-..||||+....+ ++.    -.++|.|+.|.+-||+++...||+......+-..-.+....|.
T Consensus       399 Glqlpy~S~~Vd~GGNa~lmAPEi~ta~P-Gp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPa  477 (598)
T KOG4158|consen  399 GLQLPYESDEVDLGGNAKLMAPEIATAVP-GPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPA  477 (598)
T ss_pred             ccccccccccccCCCcceecchhhhhcCC-CCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCC
Confidence              111111 11335677889999986431 111    2479999999999999999999988543332222234446778


Q ss_pred             CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 010713          150 IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  184 (503)
Q Consensus       150 ~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~  184 (503)
                      .|+.+++.+++++..+|+.||.+|++..-..+.|+
T Consensus       478 lp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~  512 (598)
T KOG4158|consen  478 LPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLN  512 (598)
T ss_pred             CcccCChHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence            89999999999999999999999998766665554

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.66  E-value=1.4e-16  Score=178.15  Aligned_cols=165  Identities=22%  Similarity=0.337  Sum_probs=131.5

Q ss_pred             HHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC------------CCCCCccCCCCCCCccccC
Q 010713           32 LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS------------SDLPRRLGTPNYMAPEQWQ   99 (503)
Q Consensus        32 Il~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~------------~~~~~~~Gt~~Y~APE~l~   99 (503)
                      ++.+++|||+.||+|||+||+|.+|+.-|++|++|||+++.........            -.....+||+.|.|||++.
T Consensus       152 mvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVil  231 (1205)
T KOG0606|consen  152 MVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVIL  231 (1205)
T ss_pred             hhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhh
Confidence            4889999999999999999999999999999999999987532111000            0112448999999999998


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-CCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHH
Q 010713          100 PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTD  178 (503)
Q Consensus       100 ~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~-~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~e  178 (503)
                      .+   .|...+|.|++|+|+|+.+.|..||.++.+++++..++... ..+.-...++++++++|.++|+.+|..|.-...
T Consensus       232 rq---gygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~g  308 (1205)
T KOG0606|consen  232 RQ---GYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGG  308 (1205)
T ss_pred             hh---ccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccch
Confidence            44   68889999999999999999999999999999988887643 223335678899999999999999999964332


Q ss_pred             HHHHHHhhccCcCCCCCCCCCCCc
Q 010713          179 ILRVFKSSQNSVHSDGGWTGHGSR  202 (503)
Q Consensus       179 lL~~L~~i~~~~~~~~~w~~~~~~  202 (503)
                         .++-.+|.+|...||..+...
T Consensus       309 ---a~evk~h~ff~~LDw~~llRq  329 (1205)
T KOG0606|consen  309 ---ALEVKQHGFFQLLDWKSLLRQ  329 (1205)
T ss_pred             ---hhhhhhccceeecccchhhhh
Confidence               233344899999999855443

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.65  E-value=4.3e-16  Score=152.25  Aligned_cols=176  Identities=22%  Similarity=0.287  Sum_probs=146.2

Q ss_pred             cCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecccCCCcEEEccCCcEEEE--ecCCcccccCC
Q 010713            2 KFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG--ILVLNLKPFNFILNEADRAVLG--DVGIPHLLLGI   76 (503)
Q Consensus         2 Ey~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~g--IvHrDLKP~NILld~~~~vKL~--DFGla~~~~~~   76 (503)
                      .|++ |||+++++....-.++..++.+++.+++.|++|||+..  |.---|....+++|++.+++|.  |--++..    
T Consensus       267 q~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfq----  342 (448)
T KOG0195|consen  267 QYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ----  342 (448)
T ss_pred             eeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeee----
Confidence            3677 89999998655556788999999999999999999985  4445688899999999877663  3222211    


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcH
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP  156 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~  156 (503)
                            .....-.|.||+||.++.......-.++|+|||++++|||.|...||.+.++.+.-.++.-...+..+|+.++.
T Consensus       343 ------e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ippgis~  416 (448)
T KOG0195|consen  343 ------EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGISR  416 (448)
T ss_pred             ------ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCCCccH
Confidence                  12334578999999998664444457899999999999999999999999999998888888889999999999


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHHHHHhhc
Q 010713          157 AVENVLLGCFEYDLRSRPLMTDILRVFKSSQ  187 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~  187 (503)
                      .+..|+.-|+..||.+||.++.++-.|+++.
T Consensus       417 hm~klm~icmnedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  417 HMNKLMNICMNEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             HHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence            9999999999999999999999999888753

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.64  E-value=5.7e-17  Score=163.20  Aligned_cols=158  Identities=19%  Similarity=0.268  Sum_probs=103.9

Q ss_pred             CCCCHHHHHHhhc---CC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCC
Q 010713            4 YEGSVGDRMAQLK---GG--KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         4 ~~GSL~d~L~~~~---~~--~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~   78 (503)
                      ..+||.+++....   ..  .+.....+.+..|+++.+++||+.|++|+||+|+|++++.+|.++|+||+.......   
T Consensus       121 ~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~---  197 (288)
T PF14531_consen  121 AQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGT---  197 (288)
T ss_dssp             -SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTE---
T ss_pred             hhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHHHeecCc---
Confidence            3467777765431   11  233445567779999999999999999999999999999999999999987655422   


Q ss_pred             CCCCCCCccCCCCCCCccccCCC-----CCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCC
Q 010713           79 PSSDLPRRLGTPNYMAPEQWQPE-----VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG  153 (503)
Q Consensus        79 ~~~~~~~~~Gt~~Y~APE~l~~~-----~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~  153 (503)
                         .......+..|.|||.....     ..-.++.+.|.|+||+++|.|+++..||............     ...+. .
T Consensus       198 ---~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~~-----f~~C~-~  268 (288)
T PF14531_consen  198 ---RYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEWD-----FSRCR-D  268 (288)
T ss_dssp             ---EEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGGG-----GTTSS--
T ss_pred             ---eeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCcccccccc-----chhcC-C
Confidence               11112345789999977431     1225788999999999999999999999865433221111     11223 7


Q ss_pred             CcHHHHHHHHHhhhcCCCCC
Q 010713          154 LPPAVENVLLGCFEYDLRSR  173 (503)
Q Consensus       154 ~s~~l~~LI~~cL~~DP~~R  173 (503)
                      +|+.++.||..+|+.||.+|
T Consensus       269 ~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  269 MPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             --HHHHHHHHHHT-SSGGGS
T ss_pred             cCHHHHHHHHHHccCCcccC
Confidence            89999999999999999988

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.61  E-value=2.8e-15  Score=144.57  Aligned_cols=184  Identities=17%  Similarity=0.257  Sum_probs=148.0

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC---CcEEEEecCCcccccCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA---DRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~---~~vKL~DFGla~~~~~~~   77 (503)
                      ||++.-||.+++.- ....++..+++-++-|++.-++|+|.++++||||||+|+|..-+   ..+.|+|||+++.+.+..
T Consensus        90 MdLLGPsLEdLfnf-C~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~  168 (341)
T KOG1163|consen   90 MDLLGPSLEDLFNF-CSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIR  168 (341)
T ss_pred             eeccCccHHHHHHH-HhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhcccc
Confidence            78888899998864 67789999999999999999999999999999999999999643   478899999998775432


Q ss_pred             ----CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHhccCCCC-
Q 010713           78 ----LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV---DEIYDAVVRRQEIPP-  149 (503)
Q Consensus        78 ----~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~---~e~~~~i~~~~~~~~-  149 (503)
                          .+........||..|.+-....+.   ..+...|+=|+|.+|.++..|..||++...   .+-+++|.+.....+ 
T Consensus       169 t~~HIpyre~r~ltGTaRYASinAh~g~---eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~i  245 (341)
T KOG1163|consen  169 TRQHIPYREDRNLTGTARYASINAHLGI---EQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPI  245 (341)
T ss_pred             ccccCccccCCccceeeeehhhhhhhhh---hhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCH
Confidence                223334456799999987776644   356788999999999999999999998644   345556655443333 


Q ss_pred             --CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          150 --IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       150 --~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                        ....+|.++.-.+.-|-..--++-|+..-+.+.+..+..
T Consensus       246 e~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr  286 (341)
T KOG1163|consen  246 EVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFR  286 (341)
T ss_pred             HHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHh
Confidence              347899999999999999999999999988887766543

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.61  E-value=3.7e-16  Score=164.61  Aligned_cols=167  Identities=20%  Similarity=0.244  Sum_probs=122.9

Q ss_pred             CcCCC-CCHHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCC
Q 010713            1 MKFYE-GSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~-~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~   78 (503)
                      |++|. .+|.|.|.+. .....+....+.++.|++.|++|   ++.+|+|+||.||++..+..+||.|||+.........
T Consensus       335 Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~  411 (516)
T KOG1033|consen  335 MNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDET  411 (516)
T ss_pred             hhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeecccCCc
Confidence            77888 6999999744 34567888999999999999999   9999999999999999999999999999866543220


Q ss_pred             ---CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCC
Q 010713           79 ---PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGL  154 (503)
Q Consensus        79 ---~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~  154 (503)
                         .....+...||..||+||++.++   .|+.++||||||++|+|+++ -..++...   .....+.....++.+... 
T Consensus       412 ~~~~~a~~t~~~gt~~YmsPEQi~g~---~y~~kvdIyaLGlil~EL~~~f~T~~er~---~t~~d~r~g~ip~~~~~d-  484 (516)
T KOG1033|consen  412 VAPAAASHTQQVGTLLYMSPEQIRGQ---QYSEKVDIYALGLILAELLIQFSTQFERI---ATLTDIRDGIIPPEFLQD-  484 (516)
T ss_pred             ccchhhhhhhcccccccCCHHHHhhh---hhhhhcchhhHHHHHHHHHHHhccHHHHH---HhhhhhhcCCCChHHhhc-
Confidence               11234566899999999999965   69999999999999999997 22222111   111112111111112222 


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHH
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMT  177 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~  177 (503)
                      .+.-..|+.+++...|.+||++.
T Consensus       485 ~p~e~~ll~~lls~~p~~RP~~~  507 (516)
T KOG1033|consen  485 YPEEYTLLQQLLSPSPEERPSAI  507 (516)
T ss_pred             CcHHHHHHHHhcCCCcccCchHH
Confidence            24456899999999999999433

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.60  E-value=4.9e-15  Score=158.17  Aligned_cols=185  Identities=22%  Similarity=0.273  Sum_probs=142.0

Q ss_pred             cCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCC-eecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            2 KFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGI-LVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         2 Ey~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gI-vHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      +||. |+|.|.+.. ....++.--...++++|+.||+|||.--| +|+.+++.|.+++....+||+|||+...... ...
T Consensus        27 ~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~-~~~  104 (484)
T KOG1023|consen   27 EYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEE-TAE  104 (484)
T ss_pred             eeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeeeeEEEEechhhhcccccc-ccc
Confidence            6787 899999975 46678888899999999999999998866 9999999999999999999999999876532 101


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCC----CCCccchHHHHHHHHHHHhCCCCCCCC----ChHHHHHHHHhccCCCCCC
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGP----ISFETDSWGFACSIIEMLTGVQPRCGR----SVDEIYDAVVRRQEIPPIP  151 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~----~s~ksDIwSLGviLyeLltG~~Pf~~~----~~~e~~~~i~~~~~~~~~~  151 (503)
                      ........-...|.|||.+.......    .+.+.|+||||++++|+++...||...    ...++...+......+..|
T Consensus       105 ~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP  184 (484)
T KOG1023|consen  105 PEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRP  184 (484)
T ss_pred             ccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCc
Confidence            11112223456789999998642222    477899999999999999999999762    3345666555423222222


Q ss_pred             -----CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          152 -----SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       152 -----~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                           ...++++..++..||..+|.+||++..+...++.+..
T Consensus       185 ~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~  226 (484)
T KOG1023|consen  185 SIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK  226 (484)
T ss_pred             chhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence                 1455679999999999999999999999988877654

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.35  E-value=4.9e-12  Score=144.04  Aligned_cols=172  Identities=17%  Similarity=0.205  Sum_probs=129.1

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEcc-------CCcEEEEecCCccc
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE-------ADRAVLGDVGIPHL   72 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~-------~~~vKL~DFGla~~   72 (503)
                      +||.+ |+|.|++.  ..+.+++..+..++.||+..+++||..+|||+||||+|+||..       ...++|+|||.+..
T Consensus       773 ~ey~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siD  850 (974)
T KOG1166|consen  773 SEYSPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSID  850 (974)
T ss_pred             eeccccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEeccccee
Confidence            58888 89999996  6778999999999999999999999999999999999999942       24689999998855


Q ss_pred             ccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc---CCCC
Q 010713           73 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ---EIPP  149 (503)
Q Consensus        73 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~---~~~~  149 (503)
                      +.-.. ....+...++|-.+-++|+..+.   +.++..|.|.|+.+++-||.|+.--           ...+.   ....
T Consensus       851 m~lfp-~~~~F~~~~~td~f~C~EM~~gr---pWtYq~DyfGlAa~~h~mLFG~y~q-----------~~~g~~~~~~~~  915 (974)
T KOG1166|consen  851 MKLFP-DGTKFKAVWHTDLFDCIEMREGR---PWTYQIDYFGLAATVHVMLFGKYME-----------VKNGSSWMVKTN  915 (974)
T ss_pred             eeEcC-CCcEEeeeeccccchhHHHhcCC---CCchhhhhHHHHHHHHHHHHHHHHH-----------hcCCcceecccc
Confidence            43211 12345567788899999999865   7999999999999999999996321           11110   0011


Q ss_pred             CCCCCcHH-HHHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          150 IPSGLPPA-VENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       150 ~~~~~s~~-l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      ++.....+ ..+++..+|..|-..=|...+|...|+.....
T Consensus       916 ~~Ry~~~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~~  956 (974)
T KOG1166|consen  916 FPRYWKRDMWNKFFDLLLNPDCDTLPNLQELRTELEEVLAE  956 (974)
T ss_pred             chhhhhHHHHHHHHHHHhCcCcccchhHHHHHHHHHHHHHH
Confidence            22223333 34678888886666668888888888776543

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.32  E-value=1.5e-12  Score=135.96  Aligned_cols=92  Identities=21%  Similarity=0.257  Sum_probs=70.0

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccc-CCCcEEEccCCcEEEEecCCcccccCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNL-KPFNFILNEADRAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDL-KP~NILld~~~~vKL~DFGla~~~~~~~~   78 (503)
                      ||||+| +|. .+.  ..+      ...++.|++++|+|||++||+|||| ||+|||++.++.++|+|||+++.+.....
T Consensus        97 mE~~~G~~L~-~~~--~~~------~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~  167 (365)
T PRK09188         97 RGWTEGVPLH-LAR--PHG------DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGA  167 (365)
T ss_pred             EEccCCCCHH-HhC--ccc------hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecccCcc
Confidence            799997 564 221  111      1468899999999999999999999 99999999999999999999987644221


Q ss_pred             CC-----CCCCCccCCCCCCCccccCCC
Q 010713           79 PS-----SDLPRRLGTPNYMAPEQWQPE  101 (503)
Q Consensus        79 ~~-----~~~~~~~Gt~~Y~APE~l~~~  101 (503)
                      ..     .......+++.|+|||.+...
T Consensus       168 ~~~~~~~~d~~~~~~~~~~~~pe~~~~~  195 (365)
T PRK09188        168 LYRIAAYEDLRHLLKHKRTYAPDALTPR  195 (365)
T ss_pred             hhhhhhhhhhhhhhccCccCCcccCChh
Confidence            11     112356788899999998743

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.29  E-value=3.4e-12  Score=123.26  Aligned_cols=122  Identities=15%  Similarity=0.111  Sum_probs=85.8

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccc-CCCcEEEccCCcEEEEecCCcccccCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNL-KPFNFILNEADRAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDL-KP~NILld~~~~vKL~DFGla~~~~~~~~   78 (503)
                      |||+.| +|.+.+.   .      ....++.|++.+|.++|++||+|||| ||+|||++.++.++|+|||++........
T Consensus        77 meyI~G~~L~~~~~---~------~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~  147 (218)
T PRK12274         77 RSYLAGAAMYQRPP---R------GDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRAR  147 (218)
T ss_pred             EeeecCccHHhhhh---h------hhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcch
Confidence            789888 5544321   1      12457889999999999999999999 79999999999999999999975432110


Q ss_pred             C-----CCC-----CCCccCCCCCCCccccCCCCCCCCC-CccchHHHHHHHHHHHhCCCCCCCCC
Q 010713           79 P-----SSD-----LPRRLGTPNYMAPEQWQPEVRGPIS-FETDSWGFACSIIEMLTGVQPRCGRS  133 (503)
Q Consensus        79 ~-----~~~-----~~~~~Gt~~Y~APE~l~~~~~~~~s-~ksDIwSLGviLyeLltG~~Pf~~~~  133 (503)
                      -     ...     ......++.|++|+...-..  ..+ ...+.++.|+-+|.++|+..++.++.
T Consensus       148 ~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~--~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~  211 (218)
T PRK12274        148 WMRLLAREDLRHLLKHKRMYCPAALTPVERRVLK--RTSWIRELWFATGKPVYRFVTRRVLHWEDN  211 (218)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhc--cchhHHHHHHHhcchHHHHHhccCCccccC
Confidence            0     000     00122567788887654221  122 45688899999999999998875543

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.26  E-value=5.5e-12  Score=120.26  Aligned_cols=70  Identities=17%  Similarity=0.165  Sum_probs=59.7

Q ss_pred             CcCCCCC-HHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH-HHCCCeecccCCCcEEEccCCcEEEEecCCcccc
Q 010713            1 MKFYEGS-VGDRMAQLKGGKLSLSNVFRYAIDLAQGILQL-HSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL   73 (503)
Q Consensus         1 MEy~~GS-L~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yL-Hs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~   73 (503)
                      |||++|+ +...+.  ....++..++..++.|++.+|.+| |+.||+||||||+|||++ ++.++|+|||++...
T Consensus        96 mE~i~g~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~LiDFG~a~~~  167 (190)
T cd05147          96 MEFIGDDGWAAPRL--KDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLYIIDVSQSVEH  167 (190)
T ss_pred             EEEeCCCCCcchhh--hcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEEEEEccccccC
Confidence            8999974 433322  456799999999999999999999 799999999999999998 578999999998653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.21  E-value=1.8e-11  Score=116.21  Aligned_cols=70  Identities=16%  Similarity=0.173  Sum_probs=60.0

Q ss_pred             CcCCCCC-HHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecccCCCcEEEccCCcEEEEecCCcccc
Q 010713            1 MKFYEGS-VGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVGIPHLL   73 (503)
Q Consensus         1 MEy~~GS-L~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs-~gIvHrDLKP~NILld~~~~vKL~DFGla~~~   73 (503)
                      |||++|. +.....  ....++..++..++.|++.+|.+||+ +||+||||||+||+++ ++.++|+|||++...
T Consensus        96 mE~~~g~~~~~~~l--~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~~liDFG~a~~~  167 (190)
T cd05145          96 MEFIGDDGSPAPRL--KDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKPYIIDVSQAVEL  167 (190)
T ss_pred             EEEecCCCchhhhh--hhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCEEEEEcccceec
Confidence            8999974 333222  34568899999999999999999999 9999999999999999 889999999998764

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.18  E-value=2.8e-12  Score=142.04  Aligned_cols=177  Identities=20%  Similarity=0.271  Sum_probs=136.1

Q ss_pred             cCCCC-CHHHHHHhhcCC-CCCHHHHHHHHHHHHHHHHHHH-HCCCeecccCCCcEEEccCC-cEEEEecCCcccccCCC
Q 010713            2 KFYEG-SVGDRMAQLKGG-KLSLSNVFRYAIDLAQGILQLH-SKGILVLNLKPFNFILNEAD-RAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         2 Ey~~G-SL~d~L~~~~~~-~Ls~~~vl~i~~QIl~aL~yLH-s~gIvHrDLKP~NILld~~~-~vKL~DFGla~~~~~~~   77 (503)
                      ||.+| ++.+.+.. ... ..+...+-.++.|+..++.|+| ..++.|+||||+|.+++..+ .++++|||+|..+....
T Consensus       101 ~~s~g~~~f~~i~~-~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~  179 (601)
T KOG0590|consen  101 SYSDGGSLFSKISH-PDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKN  179 (601)
T ss_pred             Cccccccccccccc-CCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccccC
Confidence            55554 66666621 333 6778889999999999999999 99999999999999999999 99999999998775522


Q ss_pred             CCCCCCCCccC-CCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHhccC--CCCCCCC
Q 010713           78 LPSSDLPRRLG-TPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIY-DAVVRRQE--IPPIPSG  153 (503)
Q Consensus        78 ~~~~~~~~~~G-t~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~-~~i~~~~~--~~~~~~~  153 (503)
                      .........+| ++.|+|||...+.  .......|+||.|+++..+++|..||......... ........  .......
T Consensus       180 g~~~~~~~~~g~s~~y~a~E~~~~~--~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (601)
T KOG0590|consen  180 GAERSLKDRCGSSPPYGAPEHLSGK--AYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNS  257 (601)
T ss_pred             CcceeeecccCCCCCCCCcccccch--hhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCcccc
Confidence            23344456678 9999999999863  13457889999999999999999998765443321 11111111  2334577


Q ss_pred             CcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          154 LPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       154 ~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ++....+++.+++..+|..|.+..++..
T Consensus       258 ~~~~~~~~l~k~l~~~~~~r~s~~~~~~  285 (601)
T KOG0590|consen  258 ISDQAHDLLHKILKENPSNRLSIEELKL  285 (601)
T ss_pred             CChhhhhcccccccCCchhccccccccc
Confidence            8899999999999999999999998876

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.14  E-value=2e-11  Score=119.73  Aligned_cols=94  Identities=13%  Similarity=0.112  Sum_probs=68.7

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+...      +++    ....+++.+|..||+.|++|||+||+||+++.++ ++|+|||.........  
T Consensus       122 mEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~--  188 (232)
T PRK10359        122 IEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRK--  188 (232)
T ss_pred             EEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEECCCcccccchh--
Confidence            899998 7877632      333    2456999999999999999999999999999888 9999999775542100  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEML  123 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLl  123 (503)
                        .    .       ......   ..+..++|+|+||+++..+.
T Consensus       189 --a----~-------d~~vle---r~y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        189 --A----K-------DRIDLE---RHYGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             --h----H-------HHHHHH---hHhcccccccceeEeehHHH
Confidence              0    0       002221   13557899999999887654

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.10  E-value=1.3e-10  Score=130.97  Aligned_cols=195  Identities=19%  Similarity=0.278  Sum_probs=151.5

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCC--
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP--   77 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~--   77 (503)
                      |+|++| +|...++  ..+..+.+-++.++..+..++++||+..+.|+|++|.|+++..+++.++.||+.........  
T Consensus       883 ~~~~~~~~~~Skl~--~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~  960 (1205)
T KOG0606|consen  883 GHYLNGGDLPSKLH--NSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPT  960 (1205)
T ss_pred             hHHhccCCchhhhh--cCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCc
Confidence            466664 7777776  44567888888899999999999999999999999999999999999999998433221100  


Q ss_pred             --C---------------------C---CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCC
Q 010713           78 --L---------------------P---SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG  131 (503)
Q Consensus        78 --~---------------------~---~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~  131 (503)
                        .                     .   ........+|+.|.+||...+.   .....+|.|++|+++++.++|.+||..
T Consensus       961 ~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~---~hgs~ad~~~~g~~l~e~l~g~pp~na 1037 (1205)
T KOG0606|consen  961 TDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGR---RHGSAADWWSSGVCLFEVLTGIPPFNA 1037 (1205)
T ss_pred             CCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccc---cCCCcchhhhhhhhhhhhhcCCCCCCC
Confidence              0                     0   0012234689999999999865   456788999999999999999999999


Q ss_pred             CChHHHHHHHHhccCC-CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCCCCCcC
Q 010713          132 RSVDEIYDAVVRRQEI-PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGHGSRI  203 (503)
Q Consensus       132 ~~~~e~~~~i~~~~~~-~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~~~~~~  203 (503)
                      ....+++..+...... +.-+...+...++++...+..+|.+|..+.-..+   .-.++++++.+|..+....
T Consensus      1038 ~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e---~k~~~~~~~~~~~~l~~q~ 1107 (1205)
T KOG0606|consen 1038 ETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAE---VKGHPFFQDVDWENLALQK 1107 (1205)
T ss_pred             cchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcccccc---cccCCccCCCCcccccccc
Confidence            9999998888765433 2345678899999999999999999987762221   2238999999998876543

>smart00090 RIO RIO-like kinase

Probab=98.96  E-value=6.1e-10  Score=109.93  Aligned_cols=70  Identities=20%  Similarity=0.287  Sum_probs=58.9

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecccCCCcEEEccCCcEEEEecCCcccc
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG-ILVLNLKPFNFILNEADRAVLGDVGIPHLL   73 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~g-IvHrDLKP~NILld~~~~vKL~DFGla~~~   73 (503)
                      |||++| +|...+.  ....+...++..++.||+.+|++||++| ++|+||||+||+++ ++.++|+|||.+...
T Consensus       127 ~E~~~g~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~  198 (237)
T smart00090      127 MEFIGGDGLPAPRL--KDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-DGKVVIIDVSQSVEL  198 (237)
T ss_pred             EEEecCCccccccc--ccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-CCCEEEEEChhhhcc
Confidence            789998 5554432  3445677778899999999999999999 99999999999999 889999999987643

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.89  E-value=2.6e-09  Score=105.58  Aligned_cols=65  Identities=22%  Similarity=0.259  Sum_probs=54.8

Q ss_pred             CcCCCC--CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCccc
Q 010713            1 MKFYEG--SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL   72 (503)
Q Consensus         1 MEy~~G--SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~   72 (503)
                      |||++|  +|.+++.   ...+++..    +.||+.+|.+||++||+|+||||+|||++.++.++|+|||.+..
T Consensus       125 ~e~l~G~~~L~~~l~---~~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~  191 (239)
T PRK01723        125 IERIEGARDLVALLQ---EAPLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGEL  191 (239)
T ss_pred             EEecCCCCCHHHHHh---cCCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence            578886  7888874   34566543    57899999999999999999999999999988999999997754

>PRK10345 hypothetical protein; Provisional

Probab=98.85  E-value=4.1e-09  Score=102.22  Aligned_cols=63  Identities=17%  Similarity=0.134  Sum_probs=50.8

Q ss_pred             CcCCC---CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHH-HHHHHCCCeecccCCCcEEEccC----CcEEEEecC
Q 010713            1 MKFYE---GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGI-LQLHSKGILVLNLKPFNFILNEA----DRAVLGDVG   68 (503)
Q Consensus         1 MEy~~---GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL-~yLHs~gIvHrDLKP~NILld~~----~~vKL~DFG   68 (503)
                      |||++   |+|.+++.+   ..+++.  ..++.|++.++ +|||+++|+||||||+|||++..    ..++|+||+
T Consensus        84 ~e~~G~~~~tL~~~l~~---~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~  154 (210)
T PRK10345         84 ADFDGKPSITLTEFAEQ---CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNI  154 (210)
T ss_pred             ecCCCCcchhHHHHHHc---ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence            68844   599999953   346665  46688888888 99999999999999999999743    379999954

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.83  E-value=2.3e-09  Score=115.24  Aligned_cols=174  Identities=17%  Similarity=0.138  Sum_probs=132.9

Q ss_pred             cCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHH----HHHHHHHCCCeecccCCCcEEEccC-CcEEEEecCCcccccCC
Q 010713            2 KFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQ----GILQLHSKGILVLNLKPFNFILNEA-DRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         2 Ey~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~----aL~yLHs~gIvHrDLKP~NILld~~-~~vKL~DFGla~~~~~~   76 (503)
                      |+|+.+|.++... ....++...++..+.+...    ||.++|+.+++|-|+||.||++..+ ...+++|||+...+...
T Consensus       198 E~~~~sl~~~~~~-~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~  276 (524)
T KOG0601|consen  198 ELCGESLQSYCHT-PCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDG  276 (524)
T ss_pred             ccccchhHHhhhc-ccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcceeEEccCC
Confidence            6788788888764 4455889999999999999    9999999999999999999999999 78999999998877654


Q ss_pred             CCCCCC--CCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCC
Q 010713           77 PLPSSD--LPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGL  154 (503)
Q Consensus        77 ~~~~~~--~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~  154 (503)
                      ......  .....+...|++||...+    -++...|+|+||.++.+..++..+........ +..+........+....
T Consensus       277 ~~~~~~~~~~r~~~~~~Y~~ke~~~~----l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~-W~~~r~~~ip~e~~~~~  351 (524)
T KOG0601|consen  277 NFSSVFKVSKRPEGDCIYAAKELLNG----LATFASDIFSLGEVILEAILGSHLPSVGKNSS-WSQLRQGYIPLEFCEGG  351 (524)
T ss_pred             ccccceeeeecCCCCceEeChhhhcc----ccchHhhhcchhhhhHhhHhhcccccCCCCCC-ccccccccCchhhhcCc
Confidence            422221  123367889999999975    47889999999999999998876654321111 11111222333455667


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +.++...+..|++.+|..|++...+..
T Consensus       352 s~~l~~~~~~~~d~~~~~~~~~q~~~~  378 (524)
T KOG0601|consen  352 SSSLRSVTSQMLDEDPRLRLTAQILTA  378 (524)
T ss_pred             chhhhhHHHHhcCcchhhhhHHHHHhc
Confidence            788888999999999999999888766

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.83  E-value=6.1e-09  Score=99.52  Aligned_cols=65  Identities=25%  Similarity=0.433  Sum_probs=56.9

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCccc
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL   72 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~   72 (503)
                      |||++| +|.+++...     .. +...++.+++.+|.+||+.+++|+|++|.||+++ ++.++|+|||++..
T Consensus        78 ~e~~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         78 MEYIEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             EEEeCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            789987 898888531     12 8889999999999999999999999999999999 78999999997654

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.81  E-value=5e-09  Score=99.86  Aligned_cols=65  Identities=15%  Similarity=0.230  Sum_probs=54.5

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccc
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL   73 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~   73 (503)
                      |||++| +|.++..        ......++.+++.++.++|+.||+|+||||+||+++.++.++|+|||++...
T Consensus       110 ~e~~~g~~L~~~~~--------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~  175 (198)
T cd05144         110 MEYIDGVELYRVRV--------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIYIIDWPQMVST  175 (198)
T ss_pred             EEEeCCcchhhccc--------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEEEEECCccccC
Confidence            688887 5554331        1346678999999999999999999999999999999999999999988543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.78  E-value=9.7e-09  Score=103.64  Aligned_cols=168  Identities=17%  Similarity=0.142  Sum_probs=114.7

Q ss_pred             cCCC-CCHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecccCCCcEEEccCCcEEEEecCCcccccCC
Q 010713            2 KFYE-GSVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSKG--ILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         2 Ey~~-GSL~d~L~~~~--~~~Ls~~~vl~i~~QIl~aL~yLHs~g--IvHrDLKP~NILld~~~~vKL~DFGla~~~~~~   76 (503)
                      ||+. |+|.++|++.+  ...+......+|+-||+.||.|||+..  |+|+++..+.|++..++-+|+.--.- ......
T Consensus       152 eymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~ap-~s~h~s  230 (458)
T KOG1266|consen  152 EYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAP-DSTHPS  230 (458)
T ss_pred             ecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEecccCc-cccchh
Confidence            7887 79999998764  457888899999999999999999986  99999999999999888777642111 011000


Q ss_pred             CC--CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCC-CCCCCh---HHHHHHHHhccCCCCC
Q 010713           77 PL--PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP-RCGRSV---DEIYDAVVRRQEIPPI  150 (503)
Q Consensus        77 ~~--~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~P-f~~~~~---~e~~~~i~~~~~~~~~  150 (503)
                      -.  .........+-++|.+||.-.   ....+-++|||+||++.++|..+..- -.+.+.   ++.......       
T Consensus       231 ~~~~~~~Ek~~~~~~~g~~a~~sg~---~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~-------  300 (458)
T KOG1266|consen  231 VNSTREAEKSVNTSLPGFSAPESGT---TTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVII-------  300 (458)
T ss_pred             hhhhhHhhhhccccCCccccCCcCc---ccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhhee-------
Confidence            00  001111234567899999754   23456789999999999999887543 222211   111111111       


Q ss_pred             CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          151 PSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       151 ~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                       ..-...-+.++.+|++.+|..||++.+++.
T Consensus       301 -~len~lqr~~i~kcl~~eP~~rp~ar~llf  330 (458)
T KOG1266|consen  301 -GLENGLQRGSITKCLEGEPNGRPDARLLLF  330 (458)
T ss_pred             -eccCccccCcCcccccCCCCCCcchhhhhc
Confidence             111223456899999999999999999876

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.77  E-value=8.8e-09  Score=97.61  Aligned_cols=62  Identities=26%  Similarity=0.449  Sum_probs=53.3

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCccc
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL   72 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~   72 (503)
                      |||++| +|.+++..  ...       .++.|++.+|.+||+.|++|+|++|.||+++ ++.++++|||++..
T Consensus        76 ~e~~~g~~l~~~~~~--~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724        76 MEYIEGKPLKDVIEE--GND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             EEEECCccHHHHHhh--cHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            789986 88887742  111       8899999999999999999999999999999 88999999998754

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.73  E-value=6.3e-09  Score=113.69  Aligned_cols=155  Identities=16%  Similarity=0.121  Sum_probs=111.0

Q ss_pred             HHHHHHHHHHHHHHHHHHC-CCeecccCCCcEEEccCCcEEEEecCCcccccCCCC------CCCCCCCccCCCCCCCcc
Q 010713           24 NVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL------PSSDLPRRLGTPNYMAPE   96 (503)
Q Consensus        24 ~vl~i~~QIl~aL~yLHs~-gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~------~~~~~~~~~Gt~~Y~APE   96 (503)
                      ....=+.+.+.||.|+|.. ++||++|.|++|.++.++..||+.|+.+....+...      .........-...|.|||
T Consensus       100 ~~f~nl~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE  179 (700)
T KOG2137|consen  100 DGFANLGNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPE  179 (700)
T ss_pred             HhhhhhhcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccch
Confidence            3334455667999999976 799999999999999999999999998765443111      011111223456899999


Q ss_pred             ccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc--cCCCCCCCCCcHHHHHHHHHhhhcCCCCC
Q 010713           97 QWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR--QEIPPIPSGLPPAVENVLLGCFEYDLRSR  173 (503)
Q Consensus        97 ~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~--~~~~~~~~~~s~~l~~LI~~cL~~DP~~R  173 (503)
                      ++.+.   ..+.++|+||||+++|.+.. |+.-+........+......  .....+...+++++++-+.+++..++..|
T Consensus       180 ~~~~~---~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~r  256 (700)
T KOG2137|consen  180 YLLGT---TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVR  256 (700)
T ss_pred             hhccc---cccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccC
Confidence            99864   56789999999999999994 55555444333222222211  12223457899999999999999999999


Q ss_pred             CCHHHHHH
Q 010713          174 PLMTDILR  181 (503)
Q Consensus       174 PS~~elL~  181 (503)
                      |++.+++.
T Consensus       257 p~~~~l~~  264 (700)
T KOG2137|consen  257 PTLDLLLS  264 (700)
T ss_pred             cchhhhhc
Confidence            98888776

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.70  E-value=1.7e-08  Score=110.97  Aligned_cols=61  Identities=26%  Similarity=0.406  Sum_probs=54.3

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCccc
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL   72 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~   72 (503)
                      |||++| +|.+++.          ....++.|++.+|.+||+.|++||||||+||++ .++.++|+|||+++.
T Consensus       415 ~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~  476 (535)
T PRK09605        415 MEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY  476 (535)
T ss_pred             EEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence            789986 8888774          357899999999999999999999999999999 578999999998755

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.68  E-value=2e-07  Score=97.11  Aligned_cols=168  Identities=23%  Similarity=0.361  Sum_probs=120.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCCCCCCCccCCCCCCCcccc
Q 010713           19 KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQW   98 (503)
Q Consensus        19 ~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l   98 (503)
                      ...++..++.++.|+.+.+.||..|.+-+|+.++|+|+++++.+.|.|-.....-.    ........+|...|.+||.-
T Consensus       113 ~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~----ng~~~~cpVg~~eftPPElQ  188 (637)
T COG4248         113 HCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINA----NGTLHLCPVGVSEFTPPELQ  188 (637)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccceeecc----CCceEecccCccccCCHHHh
Confidence            46788999999999999999999999999999999999999999999855332221    23334456789999999986


Q ss_pred             C-CCC-CCCCCCccchHHHHHHHHHHHhC-CCCCCCCC-------hHH--HHHHH-----HhccCC--CC--CC-CCCcH
Q 010713           99 Q-PEV-RGPISFETDSWGFACSIIEMLTG-VQPRCGRS-------VDE--IYDAV-----VRRQEI--PP--IP-SGLPP  156 (503)
Q Consensus        99 ~-~~~-~~~~s~ksDIwSLGviLyeLltG-~~Pf~~~~-------~~e--~~~~i-----~~~~~~--~~--~~-~~~s~  156 (503)
                      . +.. .-..+...|.|.||+++++++.| +.||.+..       +.+  +..-.     ......  ++  +| ..+++
T Consensus       189 ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp  268 (637)
T COG4248         189 TLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPP  268 (637)
T ss_pred             ccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCH
Confidence            5 211 11345678999999999999986 99997632       111  10000     011111  11  11 45789


Q ss_pred             HHHHHHHHhhhcC--CCCCCCHHHHHHHHHhhccCc
Q 010713          157 AVENVLLGCFEYD--LRSRPLMTDILRVFKSSQNSV  190 (503)
Q Consensus       157 ~l~~LI~~cL~~D--P~~RPS~~elL~~L~~i~~~~  190 (503)
                      +++.|..+|+..-  +.-|||++..+..|..+....
T Consensus       269 ~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L  304 (637)
T COG4248         269 DVQALFQQAFTESGVATPRPTAKAWVAALDALRQQL  304 (637)
T ss_pred             HHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhh
Confidence            9999999999753  568999998888777665443

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.67  E-value=2.5e-08  Score=93.37  Aligned_cols=50  Identities=12%  Similarity=0.161  Sum_probs=46.7

Q ss_pred             HHHHHHHHHHHHHHHHHHH-CCCeecccCCCcEEEccCCcEEEEecCCcccc
Q 010713           23 SNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVGIPHLL   73 (503)
Q Consensus        23 ~~vl~i~~QIl~aL~yLHs-~gIvHrDLKP~NILld~~~~vKL~DFGla~~~   73 (503)
                      .++..++.+++.++.++|+ .+|+|+||||+||+++ ++.++|+|||.+...
T Consensus       114 ~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~~liDfg~a~~~  164 (187)
T cd05119         114 EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGKVYIIDVPQAVEI  164 (187)
T ss_pred             ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcEEEEECcccccc
Confidence            6788999999999999999 9999999999999999 889999999988654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.40  E-value=4.4e-07  Score=87.15  Aligned_cols=69  Identities=17%  Similarity=0.203  Sum_probs=55.3

Q ss_pred             CcCCCCC-HH-HHHHhhcCCCCCHHHHHHHHHHHHHHHHHH-HHCCCeecccCCCcEEEccCCcEEEEecCCcccc
Q 010713            1 MKFYEGS-VG-DRMAQLKGGKLSLSNVFRYAIDLAQGILQL-HSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL   73 (503)
Q Consensus         1 MEy~~GS-L~-d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yL-Hs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~   73 (503)
                      |||++|+ +. ..+   +...++..+...+..+++.+|..| |+.|++|+||++.||++. ++.+.|+|||.+...
T Consensus       103 ME~Ig~~~~~~~~L---kd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~  174 (197)
T cd05146         103 MSFIGDDQVPAPKL---KDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLWH-DGKVWFIDVSQSVEP  174 (197)
T ss_pred             EEEcCCCCccchhh---hccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence            8999863 21 222   334566677888899999999998 899999999999999997 568999999987654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.33  E-value=1.2e-06  Score=88.22  Aligned_cols=71  Identities=14%  Similarity=0.027  Sum_probs=60.2

Q ss_pred             CcCCCC--CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEcc-------CCcEEEEecCCcc
Q 010713            1 MKFYEG--SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE-------ADRAVLGDVGIPH   71 (503)
Q Consensus         1 MEy~~G--SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~-------~~~vKL~DFGla~   71 (503)
                      ||+++|  +|.+++........+......++.+++..+..||..||+|+|+++.|||++.       +..+.|+||+.+.
T Consensus       114 te~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        114 TEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ  193 (268)
T ss_pred             EeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence            688887  6888886433455677888899999999999999999999999999999975       4678999999764

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.33  E-value=5.3e-07  Score=79.43  Aligned_cols=52  Identities=19%  Similarity=0.107  Sum_probs=46.5

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHC---CCeecccCCCcEEEccCCcEEEEecCCccc
Q 010713           21 SLSNVFRYAIDLAQGILQLHSK---GILVLNLKPFNFILNEADRAVLGDVGIPHL   72 (503)
Q Consensus        21 s~~~vl~i~~QIl~aL~yLHs~---gIvHrDLKP~NILld~~~~vKL~DFGla~~   72 (503)
                      +......++.+++.+|++||..   +++|+|++|.||+++..+.++++||+.+..
T Consensus        84 ~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          84 SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence            5567788899999999999985   699999999999999989999999997754

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.31  E-value=1.1e-06  Score=82.90  Aligned_cols=72  Identities=22%  Similarity=0.316  Sum_probs=60.7

Q ss_pred             CcCCCC--CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC---cEEEEecCCccc
Q 010713            1 MKFYEG--SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD---RAVLGDVGIPHL   72 (503)
Q Consensus         1 MEy~~G--SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~---~vKL~DFGla~~   72 (503)
                      |||++|  ++.+++...............++.+|-+.+.-||.++|+|+||..+||++.+++   .+.++|||++..
T Consensus        89 ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen   89 MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence            899999  899999865555555555588999999999999999999999999999997665   458999998754

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.25  E-value=1.5e-06  Score=82.15  Aligned_cols=62  Identities=23%  Similarity=0.333  Sum_probs=50.7

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCccc
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL   72 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~   72 (503)
                      |||++| .|.|.+...         ...++..+-.-+.-||..||+|+||.++||++...+ +.++|||++..
T Consensus        78 me~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642          78 MEYIEGELLKDALEEA---------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             EEEeCChhHHHHHHhc---------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence            899999 567677532         255667777778889999999999999999998654 99999999864

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.24  E-value=6.7e-07  Score=96.56  Aligned_cols=165  Identities=21%  Similarity=0.221  Sum_probs=113.7

Q ss_pred             cCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC-CcEEEEecCCcccccCCCCC
Q 010713            2 KFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA-DRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         2 Ey~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~-~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||+| ++...+  .-...+.+...+++..|++.++.++|+..++|+|+||+||++..+ +..++.||++...+.-    
T Consensus       346 e~~~~~s~~l~~--~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~----  419 (524)
T KOG0601|consen  346 EFCEGGSSSLRS--VTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAF----  419 (524)
T ss_pred             hhhcCcchhhhh--HHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccccce----
Confidence            78875 433333  134568889999999999999999999999999999999999886 6778999998754211    


Q ss_pred             CCCCCCccCCCCCC-CccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYM-APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~-APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                       .. ......-.+. ..|.+...  ..+..+.|++|||..+.+.+++...-.....   ...+ .....+.. ......+
T Consensus       420 -~~-~~~~~~~r~~p~~~~~~e~--~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~---~~~i-~~~~~p~~-~~~~~~~  490 (524)
T KOG0601|consen  420 -SS-GVFHHIDRLYPIAEILLED--YPHLSKADIFSLGLSVDEAITGSPLSESGVQ---SLTI-RSGDTPNL-PGLKLQL  490 (524)
T ss_pred             -ec-ccccccccccccchhhccc--cccccccccccccccccccccCcccCccccc---ceee-ecccccCC-CchHHhh
Confidence             11 1122233344 25555432  2577899999999999999998643211111   1111 11122222 3344888


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHH
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ..+...++..++..||.+.++..
T Consensus       491 q~~~kv~~~~~~~~~~l~~~l~~  513 (524)
T KOG0601|consen  491 QVLLKVMINPDRKRRPSAVELSL  513 (524)
T ss_pred             hhhhhhhcCCccccchhhhhhcc
Confidence            99999999999999999888766

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.23  E-value=1.4e-06  Score=93.56  Aligned_cols=69  Identities=25%  Similarity=0.299  Sum_probs=53.7

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHH-HHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccc
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQ-GILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL   73 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~-aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~   73 (503)
                      |||++| +|.++..... ..+   ....++.+++. .+..+|..|++|+|+||.||+++.++.++++|||++...
T Consensus       237 mE~i~G~~L~~~~~~~~-~~~---~~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l  307 (437)
T TIGR01982       237 MEWIDGIPLSDIAALDE-AGL---DRKALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRL  307 (437)
T ss_pred             EEeECCcccccHHHHHh-cCC---CHHHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence            899997 7777664321 122   23456666666 478899999999999999999999999999999998665

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.22  E-value=2.4e-06  Score=82.43  Aligned_cols=70  Identities=27%  Similarity=0.309  Sum_probs=60.0

Q ss_pred             CcCCCC--CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC---cEEEEecCCccc
Q 010713            1 MKFYEG--SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD---RAVLGDVGIPHL   72 (503)
Q Consensus         1 MEy~~G--SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~---~vKL~DFGla~~   72 (503)
                      ||+++|  +|.+++...  ..++......++.+++..+.-||++||+|+|+++.|||++.++   .+.++||+.+..
T Consensus        96 te~l~~~~~L~~~~~~~--~~~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~  170 (206)
T PF06293_consen   96 TEALPGAQDLRDLLQQW--EQLDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF  170 (206)
T ss_pred             EEeCCCcccHHHHHHhh--cccchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence            477787  688888642  2277788899999999999999999999999999999999887   899999997654

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.12  E-value=2.1e-06  Score=78.70  Aligned_cols=45  Identities=27%  Similarity=0.219  Sum_probs=39.6

Q ss_pred             HHHHHHHHHHHHHHHHCCC-----eecccCCCcEEEccCCcEEEEecCCcc
Q 010713           26 FRYAIDLAQGILQLHSKGI-----LVLNLKPFNFILNEADRAVLGDVGIPH   71 (503)
Q Consensus        26 l~i~~QIl~aL~yLHs~gI-----vHrDLKP~NILld~~~~vKL~DFGla~   71 (503)
                      ..++.+++++|+.||+.++     +|+|++|.||+++ ++.++++||+.+.
T Consensus        86 ~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~  135 (170)
T cd05151          86 PENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG  135 (170)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence            3457899999999999985     9999999999999 6789999999764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=97.97  E-value=8.7e-05  Score=81.60  Aligned_cols=97  Identities=20%  Similarity=0.303  Sum_probs=72.7

Q ss_pred             CHHHHHHHHHHHHHHHHHHH-HCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCCCCCCCccCCCCCCCccccC
Q 010713           21 SLSNVFRYAIDLAQGILQLH-SKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQ   99 (503)
Q Consensus        21 s~~~vl~i~~QIl~aL~yLH-s~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~   99 (503)
                      ....+.-.+.||+.||.||| +.+++|++|.-..|+++..|..||++|.++........   ......--..|..|+.+.
T Consensus       102 ~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~---~~~~~~~~~s~~~P~~~~  178 (690)
T KOG1243|consen  102 GKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA---PAKSLYLIESFDDPEEID  178 (690)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc---ccccchhhhcccChhhcC
Confidence            35667778999999999998 66899999999999999999999999988755433211   111222223566777654


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHHhC
Q 010713          100 PEVRGPISFETDSWGFACSIIEMLTG  125 (503)
Q Consensus       100 ~~~~~~~s~ksDIwSLGviLyeLltG  125 (503)
                      ..     .-..|.|.|||++++++.|
T Consensus       179 ~s-----~~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  179 PS-----EWSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             cc-----ccchhhhhHHHHHHHHhCc
Confidence            22     2456999999999999999

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.87  E-value=4.1e-06  Score=79.98  Aligned_cols=69  Identities=20%  Similarity=0.320  Sum_probs=46.6

Q ss_pred             CcCCC--CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH-HHHCCCeecccCCCcEEEccCCcEEEEecCCcccc
Q 010713            1 MKFYE--GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQ-LHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL   73 (503)
Q Consensus         1 MEy~~--GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~y-LHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~   73 (503)
                      |||++  |.....+..   ..++..+...++.+++..+.. +|+.||+|+||.+.||+++++ .+.++|||.+...
T Consensus        85 ME~I~~~G~~~~~l~~---~~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf~qav~~  156 (188)
T PF01163_consen   85 MEYIGEDGVPLPRLKD---VDLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDFGQAVDS  156 (188)
T ss_dssp             EE--EETTEEGGCHHH---CGGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--GTTEEET
T ss_pred             EEecCCCccchhhHHh---ccccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEecCcceec
Confidence            89998  743333432   122245667788888885555 579999999999999999877 8999999987653

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=97.75  E-value=0.00032  Score=75.39  Aligned_cols=149  Identities=17%  Similarity=0.233  Sum_probs=107.7

Q ss_pred             CcCCCC--CHHHHHHhhc-------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEE
Q 010713            1 MKFYEG--SVGDRMAQLK-------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG   65 (503)
Q Consensus         1 MEy~~G--SL~d~L~~~~-------------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~   65 (503)
                      ++|+++  +|.++.....             +..+++..++.|+.||..||.++|+.|+.-+-|.|.+|+++.+.+++|.
T Consensus       356 YDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS  435 (655)
T KOG3741|consen  356 YDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRIS  435 (655)
T ss_pred             EecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEe
Confidence            478884  7888775431             2357789999999999999999999999999999999999999899998


Q ss_pred             ecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCC-CCCCChHHH-HHHHHh
Q 010713           66 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP-RCGRSVDEI-YDAVVR  143 (503)
Q Consensus        66 DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~P-f~~~~~~e~-~~~i~~  143 (503)
                      ..|+........               .  |.+.      -..+-|.=.||.+++.|.||..- +......+. ...   
T Consensus       436 ~C~i~Dvl~~d~---------------~--~~le------~~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~---  489 (655)
T KOG3741|consen  436 GCGIMDVLQEDP---------------T--EPLE------SQQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTR---  489 (655)
T ss_pred             cccceeeecCCC---------------C--cchh------HHhhhhHHHHHHHHHHHhhcccccccccchHHHHHHH---
Confidence            888765543211               0  1111      11345999999999999999543 222222221 111   


Q ss_pred             ccCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHH
Q 010713          144 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV  182 (503)
Q Consensus       144 ~~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~  182 (503)
                            +...++.+++++|.-+...++++ -++.+++..
T Consensus       490 ------I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~  521 (655)
T KOG3741|consen  490 ------ITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPM  521 (655)
T ss_pred             ------hhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence                  34567889999999999998887 577777664

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.73  E-value=2.5e-05  Score=85.74  Aligned_cols=67  Identities=24%  Similarity=0.254  Sum_probs=47.6

Q ss_pred             CcCCCC-CHHHHHHhhcCC----CCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC----cEEEEecCCcc
Q 010713            1 MKFYEG-SVGDRMAQLKGG----KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD----RAVLGDVGIPH   71 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~----~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~----~vKL~DFGla~   71 (503)
                      |||++| .+.++-.-...+    .+....+..++.|+       +..|++|+|+||.||+++.++    .++++|||++.
T Consensus       240 mE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-------f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg  312 (537)
T PRK04750        240 MERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-------FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVG  312 (537)
T ss_pred             EeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-------HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEE
Confidence            899998 776643211222    23344444444444       469999999999999999888    99999999987


Q ss_pred             ccc
Q 010713           72 LLL   74 (503)
Q Consensus        72 ~~~   74 (503)
                      ...
T Consensus       313 ~l~  315 (537)
T PRK04750        313 SLN  315 (537)
T ss_pred             ECC
Confidence            653

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=97.62  E-value=6.2e-05  Score=73.49  Aligned_cols=60  Identities=23%  Similarity=0.324  Sum_probs=46.5

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcc
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH   71 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~   71 (503)
                      |||++| .|.+...      +++    .+...+.+++.-||+.|++|+|.+|.|++++.+ .++++||+..+
T Consensus       122 ~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~-~i~iID~~~k~  182 (229)
T PF06176_consen  122 MEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNN-GIRIIDTQGKR  182 (229)
T ss_pred             EEEecCeecccchh------cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECC-cEEEEECcccc
Confidence            789998 5554432      232    245667788999999999999999999999855 59999998654

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PRK09902 hypothetical protein; Provisional

Probab=97.60  E-value=0.00015  Score=70.49  Aligned_cols=69  Identities=16%  Similarity=0.002  Sum_probs=57.6

Q ss_pred             CCC--CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCc--EEEEecCCccc
Q 010713            4 YEG--SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR--AVLGDVGIPHL   72 (503)
Q Consensus         4 ~~G--SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~--vKL~DFGla~~   72 (503)
                      ++|  +|.+++....-.+.+..+...++.+++..|.-||+.|+.|+|+.+.||+++.++.  ++++||.-++.
T Consensus       107 L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        107 MAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR  179 (216)
T ss_pred             CCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence            454  7888875433456688888999999999999999999999999999999986676  99999986543

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=97.13  E-value=0.00051  Score=65.34  Aligned_cols=30  Identities=13%  Similarity=0.172  Sum_probs=25.3

Q ss_pred             CCeecccCCCcEEEcc--CCcEEEEecCCccc
Q 010713           43 GILVLNLKPFNFILNE--ADRAVLGDVGIPHL   72 (503)
Q Consensus        43 gIvHrDLKP~NILld~--~~~vKL~DFGla~~   72 (503)
                      .++|+|++|.||+++.  ++.+.|+||+.+..
T Consensus       175 ~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         175 GLVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             EEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence            3699999999999998  56688999997643

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=96.94  E-value=0.0014  Score=65.73  Aligned_cols=66  Identities=20%  Similarity=0.201  Sum_probs=50.2

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCccc
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHL   72 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~   72 (503)
                      |||++|...  .    .-+++....-.++..|++-+..+-..||+|+|+++-||+++++|.+.++||-.+..
T Consensus       186 Me~ieG~eL--~----~~r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~~~vIDwPQ~v~  251 (304)
T COG0478         186 MEYIEGVEL--Y----RLRLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGDIVVIDWPQAVP  251 (304)
T ss_pred             eehccccee--e----cccCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCCEEEEeCccccc
Confidence            888988221  1    12234555666677777777777799999999999999999999999999975543

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=96.82  E-value=0.0035  Score=73.16  Aligned_cols=162  Identities=14%  Similarity=0.133  Sum_probs=107.3

Q ss_pred             cCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCC---cEEEccCCcEEEE--ecCCcccccC
Q 010713            2 KFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPF---NFILNEADRAVLG--DVGIPHLLLG   75 (503)
Q Consensus         2 Ey~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~---NILld~~~~vKL~--DFGla~~~~~   75 (503)
                      |||.+ ++.+.+.  .-+.++.+..+.+..++++||.|+|+....|.-+...   +...+..+...++  ||+.+..+..
T Consensus       266 ~~~s~~~~~~~~q--~v~~i~~~~~r~~~~~~~~GL~~~h~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d  343 (1351)
T KOG1035|consen  266 EICSKVELRSLLQ--SVGSIPLETLRILHQKLLEGLAYLHSLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPD  343 (1351)
T ss_pred             hhcCccchHHHHh--hccccCHHHHHHHHHHHhhhHHHHHHhccceeEEecccccccccCccceeecchhhhcccccCCC
Confidence            45665 6666665  4567899999999999999999999996666555544   3334455556655  8887766543


Q ss_pred             CCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCc
Q 010713           76 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLP  155 (503)
Q Consensus        76 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s  155 (503)
                      ..    .......+..+.++|..... ....+...|+|.+|.....+..|..+-...   ......        .+....
T Consensus       344 ~~----~~~~~~~~~~~~~~e~~~~~-~~~~~r~~dL~~lgll~~~~~~~~~i~~~~---~~~~~~--------l~~~~~  407 (1351)
T KOG1035|consen  344 NE----KSFSDLLAEIRNADEDLKEN-TAKKSRLTDLWCLGLLLLQLSQGEDISEKS---AVPVSL--------LDVLST  407 (1351)
T ss_pred             cc----cchhhcCccccccccccccc-cchhhhhhHHHHHHHHHhhhhhcCcccccc---cchhhh--------hccccc
Confidence            21    12233445567777777643 223345579999999999998876442110   000011        112222


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          156 PAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ..+.+...+|+..++++|+++.+++.
T Consensus       408 ~~~~d~~~~~~~~~~~~Rl~~~~ll~  433 (1351)
T KOG1035|consen  408 SELLDALPKCLDEDSEERLSALELLT  433 (1351)
T ss_pred             hhhhhhhhhhcchhhhhccchhhhhh
Confidence            37888999999999999999999998

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=96.55  E-value=0.003  Score=62.72  Aligned_cols=69  Identities=19%  Similarity=0.263  Sum_probs=53.3

Q ss_pred             CcCCCCC--HHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecccCCCcEEEccCCcEEEEecCCcccc
Q 010713            1 MKFYEGS--VGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVGIPHLL   73 (503)
Q Consensus         1 MEy~~GS--L~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs-~gIvHrDLKP~NILld~~~~vKL~DFGla~~~   73 (503)
                      |||++..  -.-.|   +.-.+...++..+..++++.+.-|-. .+++|+||+.-|||+. ++.+.++||+.|...
T Consensus       145 MEfIg~~g~pAP~L---kDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~  216 (268)
T COG1718         145 MEFIGDDGLPAPRL---KDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DGEPYIIDVSQAVTI  216 (268)
T ss_pred             EEeccCCCCCCCCc---ccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-CCeEEEEECcccccc
Confidence            6777642  11112   33344555788899999999999887 8999999999999999 889999999977554

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=95.91  E-value=0.073  Score=50.78  Aligned_cols=55  Identities=18%  Similarity=0.169  Sum_probs=48.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHH---CCCeecccCCCcEEEccCCcEEEEecCCcccc
Q 010713           19 KLSLSNVFRYAIDLAQGILQLHS---KGILVLNLKPFNFILNEADRAVLGDVGIPHLL   73 (503)
Q Consensus        19 ~Ls~~~vl~i~~QIl~aL~yLHs---~gIvHrDLKP~NILld~~~~vKL~DFGla~~~   73 (503)
                      .-++..+.+++.++++.+++|+.   ..+.-.|++++|+-+++++++|++|...+...
T Consensus        55 ~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~  112 (188)
T PF12260_consen   55 QSPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE  112 (188)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence            35889999999999999999998   35888999999999999999999999876543

Proteins in this uncharacterised family are described as transmembrane proteins.

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=95.61  E-value=0.019  Score=63.06  Aligned_cols=71  Identities=24%  Similarity=0.323  Sum_probs=50.0

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCccccc
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL   74 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~   74 (503)
                      |||++| .+.+.... +...++...+.....++.  +..+-..|++|.|.+|.||+++.++++.+.|||+.....
T Consensus       245 mE~i~Gi~i~d~~~l-~~~g~d~k~ia~~~~~~f--~~q~~~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~  316 (517)
T COG0661         245 MEWIDGIKISDIAAL-KSAGIDRKELAELLVRAF--LRQLLRDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLD  316 (517)
T ss_pred             EEeeCCEecccHHHH-HhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCccceEEecCCcEEEEcCcceecCC
Confidence            899999 56666432 334556444333332221  344445899999999999999999999999999876553

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=95.04  E-value=0.0035  Score=74.85  Aligned_cols=174  Identities=14%  Similarity=-0.036  Sum_probs=110.4

Q ss_pred             CcCCC-CCHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC-----CeecccCCCcEEEccCCcEEEEecCCccc
Q 010713            1 MKFYE-GSVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSKG-----ILVLNLKPFNFILNEADRAVLGDVGIPHL   72 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~--~~~Ls~~~vl~i~~QIl~aL~yLHs~g-----IvHrDLKP~NILld~~~~vKL~DFGla~~   72 (503)
                      |+|+. |.+.+.+..-.  ...+...-+.....+.+.+..-+|+..     -+|+++|+-|.+|..+.+++++++|+.+.
T Consensus      1310 ~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKI 1389 (2724)
T KOG1826|consen 1310 SLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKI 1389 (2724)
T ss_pred             HHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecCCcccccccccccc
Confidence            45666 57888776431  233444444444444477777777652     79999999999999999999999999873


Q ss_pred             ccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCC
Q 010713           73 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS  152 (503)
Q Consensus        73 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~  152 (503)
                      ...   .........+++.|+.|+..+.-   .++.++|+|..++.+|....|..+|....... .+.+........++.
T Consensus      1390 knp---~~sf~Gl~l~sp~~v~qli~N~i---k~t~rsdilr~s~~ly~rs~~n~~fi~flq~~-Lkgiidn~tf~sIe~ 1462 (2724)
T KOG1826|consen 1390 KNP---VLSFFGLELCSPIYVLQLIKNEI---KFTKRSDILRRSLSLYLRSDGNAYFIFFLQPA-LKGIIDNHTFFSIEK 1462 (2724)
T ss_pred             cCc---hHhhhhhhhCCHHHHHHHHHHHH---hhhhHHHHHHHHHHHHHHhcccHHHHHHHHHH-HcCcccccccccccc
Confidence            221   12223455678888999887633   46667999999999999998877763221111 111122222233444


Q ss_pred             CCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          153 GLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       153 ~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ..|.+.......+|-.....||.-...+.
T Consensus      1463 l~pgdaNve~~~~Ll~K~~~rp~q~isls 1491 (2724)
T KOG1826|consen 1463 LKPGDANVEALHRLLWKYMERPGQYISLS 1491 (2724)
T ss_pred             cCCCcccHHHHHHHHHHhhhcchhhhhcc
Confidence            44555555555666666677776655544

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=93.91  E-value=0.14  Score=50.14  Aligned_cols=28  Identities=18%  Similarity=0.003  Sum_probs=24.7

Q ss_pred             CCeecccCCCcEEEccCCcEEEEecCCcc
Q 010713           43 GILVLNLKPFNFILNEADRAVLGDVGIPH   71 (503)
Q Consensus        43 gIvHrDLKP~NILld~~~~vKL~DFGla~   71 (503)
                      .++|+|+.|.||++++++ +.++||+.+.
T Consensus       154 ~~~HgD~~~~Nii~~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       154 TCLHGDFQIGNLITSGKG-TYWIDLGDFG  181 (226)
T ss_pred             ceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence            478999999999999887 9999999653

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=93.61  E-value=0.086  Score=58.08  Aligned_cols=70  Identities=17%  Similarity=0.348  Sum_probs=48.7

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEcc----CCcEEEEecCCcccc
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE----ADRAVLGDVGIPHLL   73 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~----~~~vKL~DFGla~~~   73 (503)
                      |||++| .+.|+- .+....++...+...+.+..  ++.+=..|++|+|=+|.||++..    +..+.+.|||+....
T Consensus       281 ME~~~G~~i~Dl~-~i~~~gi~~~~i~~~l~~~~--~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~i  355 (538)
T KOG1235|consen  281 MEYVDGIKINDLD-AIDKRGISPHDILNKLVEAY--LEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVI  355 (538)
T ss_pred             EEecCCccCCCHH-HHHHcCCCHHHHHHHHHHHH--HHHHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccc
Confidence            899998 333332 22455677775555444433  23344578999999999999984    568999999987665

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=91.65  E-value=0.28  Score=49.92  Aligned_cols=29  Identities=17%  Similarity=0.254  Sum_probs=25.9

Q ss_pred             CCCeecccCCCcEEEccCCcEEEEecCCc
Q 010713           42 KGILVLNLKPFNFILNEADRAVLGDVGIP   70 (503)
Q Consensus        42 ~gIvHrDLKP~NILld~~~~vKL~DFGla   70 (503)
                      .+++|+|+++.||+++.++...++||+.+
T Consensus       187 ~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~  215 (307)
T TIGR00938       187 RGVIHADLFPDNVLFDGDSVKGVIDFYFA  215 (307)
T ss_pred             CccCCCCCCcCcEEEECCceEEEeecccc
Confidence            57999999999999998876789999965

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=91.60  E-value=0.2  Score=48.53  Aligned_cols=29  Identities=21%  Similarity=0.062  Sum_probs=25.6

Q ss_pred             CCeecccCCCcEEEcc-CCcEEEEecCCcc
Q 010713           43 GILVLNLKPFNFILNE-ADRAVLGDVGIPH   71 (503)
Q Consensus        43 gIvHrDLKP~NILld~-~~~vKL~DFGla~   71 (503)
                      .++|+|+.+.|||++. ++.+.++||..+.
T Consensus       171 ~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~  200 (235)
T cd05157         171 VFCHNDLLSGNIIYNEEKNSVKFIDYEYAG  200 (235)
T ss_pred             EEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence            5999999999999997 5789999998653

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=91.46  E-value=0.39  Score=48.50  Aligned_cols=28  Identities=14%  Similarity=0.227  Sum_probs=24.7

Q ss_pred             CCCeecccCCCcEEEccCCcEEEEecCCc
Q 010713           42 KGILVLNLKPFNFILNEADRAVLGDVGIP   70 (503)
Q Consensus        42 ~gIvHrDLKP~NILld~~~~vKL~DFGla   70 (503)
                      .+++|+|+.+.||+++. +.+.|+||+.+
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~  214 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYC  214 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECccc
Confidence            47899999999999987 67899999854

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=90.70  E-value=0.25  Score=48.19  Aligned_cols=30  Identities=17%  Similarity=0.169  Sum_probs=24.7

Q ss_pred             CCCeecccCCCcEEEccCCcEEEEecCCcc
Q 010713           42 KGILVLNLKPFNFILNEADRAVLGDVGIPH   71 (503)
Q Consensus        42 ~gIvHrDLKP~NILld~~~~vKL~DFGla~   71 (503)
                      .+++|+|+.+.||+++.+...-|+||+.+.
T Consensus       164 ~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~  193 (235)
T cd05155         164 PVWFHGDLAPGNLLVQDGRLSAVIDFGCLG  193 (235)
T ss_pred             ceEEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence            358999999999999866555699999653

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PRK05231 homoserine kinase; Provisional

Probab=90.62  E-value=0.47  Score=48.36  Aligned_cols=30  Identities=13%  Similarity=0.131  Sum_probs=25.2

Q ss_pred             CCCeecccCCCcEEEccCCcEEEEecCCcc
Q 010713           42 KGILVLNLKPFNFILNEADRAVLGDVGIPH   71 (503)
Q Consensus        42 ~gIvHrDLKP~NILld~~~~vKL~DFGla~   71 (503)
                      .+++|+|+.|.||+++.+...-++||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        187 RGVIHADLFRDNVLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             cccCCCCCCCCcEEEECCceEEEEeccccc
Confidence            479999999999999866555799999653

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=90.19  E-value=0.43  Score=47.94  Aligned_cols=29  Identities=14%  Similarity=0.197  Sum_probs=25.5

Q ss_pred             CCCeecccCCCcEEEccCCcEEEEecCCc
Q 010713           42 KGILVLNLKPFNFILNEADRAVLGDVGIP   70 (503)
Q Consensus        42 ~gIvHrDLKP~NILld~~~~vKL~DFGla   70 (503)
                      .+++|+|+.|.||+++.++.+.|+||+.+
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a  203 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDELSGVIDFYFA  203 (296)
T ss_pred             CcCCccCcCcccEEEeCCceEEEeehhhh
Confidence            47999999999999998776789999865

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=89.99  E-value=0.25  Score=51.27  Aligned_cols=47  Identities=21%  Similarity=0.261  Sum_probs=39.5

Q ss_pred             HHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcc
Q 010713           25 VFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH   71 (503)
Q Consensus        25 vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~   71 (503)
                      +..+...+..-+--|-.+|+||+|..-=||++++++.++++||-...
T Consensus       204 ~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~dd~~i~vIDFPQmv  250 (465)
T KOG2268|consen  204 PPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKDDDKIVVIDFPQMV  250 (465)
T ss_pred             hHHHHHHHHHHHHHHHHcCceecccchheeEEecCCCEEEeechHhh
Confidence            44556666677778889999999999999999999999999997543

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=89.98  E-value=0.18  Score=47.70  Aligned_cols=30  Identities=17%  Similarity=0.159  Sum_probs=20.7

Q ss_pred             CCCeecccCCCcEEEc-cCCcEEEEecCCcc
Q 010713           42 KGILVLNLKPFNFILN-EADRAVLGDVGIPH   71 (503)
Q Consensus        42 ~gIvHrDLKP~NILld-~~~~vKL~DFGla~   71 (503)
                      ..++|+|+.|.||+++ .++.+.|+||+.+.
T Consensus       166 ~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~  196 (239)
T PF01636_consen  166 PVLIHGDLHPGNILVDPSDGRIGIIDFEDAG  196 (239)
T ss_dssp             EEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred             cEEEEeccccccceeeeccceeEEEecccce
Confidence            4599999999999999 55666799998653

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=89.89  E-value=0.54  Score=47.49  Aligned_cols=29  Identities=21%  Similarity=0.132  Sum_probs=25.5

Q ss_pred             CCeecccCCCcEEEccC----CcEEEEecCCcc
Q 010713           43 GILVLNLKPFNFILNEA----DRAVLGDVGIPH   71 (503)
Q Consensus        43 gIvHrDLKP~NILld~~----~~vKL~DFGla~   71 (503)
                      .++|+|+.+.||+++.+    +.+.++||..+.
T Consensus       180 ~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~  212 (302)
T cd05156         180 VFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS  212 (302)
T ss_pred             eEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence            58999999999999975    789999998653

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=88.68  E-value=0.68  Score=46.73  Aligned_cols=50  Identities=14%  Similarity=0.070  Sum_probs=38.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHC--CCeecccCCCcEEEccCCcEEEEecCCcc
Q 010713           22 LSNVFRYAIDLAQGILQLHSK--GILVLNLKPFNFILNEADRAVLGDVGIPH   71 (503)
Q Consensus        22 ~~~vl~i~~QIl~aL~yLHs~--gIvHrDLKP~NILld~~~~vKL~DFGla~   71 (503)
                      .....+.+..+-.++.-.|..  -++|+|+.|+|++.++.+.++|+||..|.
T Consensus       131 ~~~~~~~~~~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg  182 (269)
T COG0510         131 NHLLRKKLKELRRALEEVPKDDLVPCHNDLNPGNLLLTDKGGLFLIDWEYAG  182 (269)
T ss_pred             hHHHHHHHHHHHHHhhhcCCCceeeecCCCCccceEEcCCCcEEEEecccCC
Confidence            344445566666666666655  58999999999999998999999998654

>PF02237 BPL_C: Biotin protein ligase C terminal domain; InterPro: IPR003142 This C-terminal domain has an SH3-like barrel fold, the function of which is unknown

Probab=87.52  E-value=1.4  Score=32.42  Aligned_cols=32  Identities=28%  Similarity=0.289  Sum_probs=25.9

Q ss_pred             cccEEEeecccccccccCCcccCCcceeeeEEEEecCCeEEEecC
Q 010713          343 VGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPNGCLIVRFP  387 (503)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (503)
                      .||.|+++.             .+...+|++..|+++|+|+|+.+
T Consensus         2 lG~~V~v~~-------------~~~~~~G~~~gId~~G~L~v~~~   33 (48)
T PF02237_consen    2 LGQEVRVET-------------GDGEIEGIAEGIDDDGALLVRTE   33 (48)
T ss_dssp             TTSEEEEEE-------------TSCEEEEEEEEEETTSEEEEEET
T ss_pred             CCCEEEEEE-------------CCeEEEEEEEEECCCCEEEEEEC
Confidence            578888764             22335999999999999999998

It is found associated with prokaryotic bifunctional transcriptional repressors [] and eukaryotic enzymes involved in biotin utilization [, ]. In Escherichia coli the biotin operon repressor (BirA) is a bifunctional protein. BirA acts both as the acetyl-coA carboxylase biotin holoenzyme synthetase (6.3.4.15 from EC) and as the biotin operon repressor. DNA sequence analysis of mutations indicates that the helix-turn-helix DNA binding region is located at the N terminus while mutations affecting enzyme function, although mapping over a large region, are found mainly in the central part of the protein's primary sequence [].; GO: 0006464 protein modification process; PDB: 3RUX_A 2CGH_A 3L1A_B 3L2Z_A 1HXD_A 1BIB_A 2EWN_B 1BIA_A 2EJ9_A 3FJP_A ....

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=86.14  E-value=0.56  Score=45.77  Aligned_cols=29  Identities=14%  Similarity=-0.036  Sum_probs=25.4

Q ss_pred             CCeecccCCCcEEEccCCcEEEEecCCcc
Q 010713           43 GILVLNLKPFNFILNEADRAVLGDVGIPH   71 (503)
Q Consensus        43 gIvHrDLKP~NILld~~~~vKL~DFGla~   71 (503)
                      .++|+|+.|.|||++.++.+.|+||+.+.
T Consensus       164 ~l~HgD~~~~Nil~~~~~~~~iIDwe~a~  192 (244)
T cd05150         164 VVTHGDACLPNIIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             EEECCCCCCccEEEeCCcEEEEEEccccc
Confidence            48999999999999987777899998653

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PRK10271 thiK thiamine kinase; Provisional

Probab=86.09  E-value=0.63  Score=44.54  Aligned_cols=28  Identities=14%  Similarity=0.036  Sum_probs=24.3

Q ss_pred             CeecccCCCcEEEccCCcEEEEecCCccc
Q 010713           44 ILVLNLKPFNFILNEADRAVLGDVGIPHL   72 (503)
Q Consensus        44 IvHrDLKP~NILld~~~~vKL~DFGla~~   72 (503)
                      .+|+|+.|.||++++++ ++++||+.+..
T Consensus        79 p~H~D~~~~N~~~~~~~-~~lIDwe~a~~  106 (188)
T PRK10271         79 PLHMDVHAGNLVHSASG-LRLIDWEYAGD  106 (188)
T ss_pred             eecCCCCCccEEEECCC-EEEEeCCcccC
Confidence            69999999999998776 99999997643

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=86.08  E-value=0.23  Score=55.34  Aligned_cols=96  Identities=27%  Similarity=0.284  Sum_probs=72.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCC
Q 010713           23 SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV  102 (503)
Q Consensus        23 ~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~  102 (503)
                      -+...+.+.-+++|++||+.-=+|+|    ||+..+ +..++.+|+....+....    ......+++.++|||+.... 
T Consensus       336 ~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~----~~~t~~~~~~~~~pev~~~~-  405 (829)
T KOG0576|consen  336 YQFAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM----KPRTAIGTPEPLAPEVIQEN-  405 (829)
T ss_pred             hhhhhhhhhhcccccccccccccCcc----cccccc-cccccccccCCcccCccc----ccccCCCCCCCCCchhhccc-
Confidence            34445566667789999998778888    777664 678999999887664422    34567899999999988743 


Q ss_pred             CCCCCCccchHHHHHHHHHHHhCCCCCC
Q 010713          103 RGPISFETDSWGFACSIIEMLTGVQPRC  130 (503)
Q Consensus       103 ~~~~s~ksDIwSLGviLyeLltG~~Pf~  130 (503)
                        .+....|.|+++.--.++.-|.+|-.
T Consensus       406 --~~~~~p~~~~~~~~~~~~ap~~pPr~  431 (829)
T KOG0576|consen  406 --TIDGCPDSGSLAVSAIQMAPGLPPRS  431 (829)
T ss_pred             --ccccCCCccCCCcchhhcCCCCCCCC
Confidence              67788899999987777777776643

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=85.69  E-value=2.2  Score=41.10  Aligned_cols=55  Identities=27%  Similarity=0.410  Sum_probs=38.5

Q ss_pred             CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC----cEEEEe-cC
Q 010713            7 SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD----RAVLGD-VG   68 (503)
Q Consensus         7 SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~----~vKL~D-FG   68 (503)
                      +|.+++.   .+.++. +...   .+-+-..||-+++|+.+|++|.||++....    .+.|+| ||
T Consensus       109 TL~~~l~---~~~~~~-~~~~---~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~~~lvlIDG~G  168 (199)
T PF10707_consen  109 TLEDYLK---EGGLTE-ELRQ---ALDEFKRYLLDHHIVIRDLNPHNIVVQRRDSGEFRLVLIDGLG  168 (199)
T ss_pred             cHHHHHH---cCCccH-HHHH---HHHHHHHHHHHcCCeecCCCcccEEEEecCCCceEEEEEeCCC
Confidence            6888883   455665 3333   344455678899999999999999996442    577777 44

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>smart00743 Agenet Tudor-like domain present in plant sequences

Probab=85.56  E-value=1.6  Score=33.32  Aligned_cols=38  Identities=21%  Similarity=0.377  Sum_probs=32.9

Q ss_pred             ccccccEEEeecccccccccCCcccCCcceeeeEEEEecCCeEEEecCC
Q 010713          340 SYCVGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPG  388 (503)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (503)
                      .|++|+.|-++-+-           .++|-.|+|..++++++..|.|++
T Consensus         2 ~~~~G~~Ve~~~~~-----------~~~W~~a~V~~~~~~~~~~V~~~~   39 (61)
T smart00743        2 DFKKGDRVEVFSKE-----------EDSWWEAVVTKVLGDGKYLVRYLT   39 (61)
T ss_pred             CcCCCCEEEEEECC-----------CCEEEEEEEEEECCCCEEEEEECC
Confidence            47899999887532           689999999999998899999995

Domain in plant sequences with possible chromatin-associated functions.

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=85.48  E-value=1.2  Score=45.35  Aligned_cols=29  Identities=10%  Similarity=0.085  Sum_probs=26.5

Q ss_pred             CCeecccCCCcEEEccCCcEEEEecCCcc
Q 010713           43 GILVLNLKPFNFILNEADRAVLGDVGIPH   71 (503)
Q Consensus        43 gIvHrDLKP~NILld~~~~vKL~DFGla~   71 (503)
                      +++|+|+.+.||+++.++.+.++||..+.
T Consensus       197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~  225 (309)
T TIGR02904       197 VLVHGKLSLSHFLYDETRGGYFINFEKAS  225 (309)
T ss_pred             eeeCCCCcHHhEEEcCCCCEEEEEhhhcc
Confidence            69999999999999999899999998664

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>TIGR02721 ycfN_thiK thiamine kinase

Probab=85.02  E-value=0.63  Score=45.91  Aligned_cols=28  Identities=14%  Similarity=0.247  Sum_probs=24.6

Q ss_pred             CCeecccCCCcEEEccCCcEEEEecCCcc
Q 010713           43 GILVLNLKPFNFILNEADRAVLGDVGIPH   71 (503)
Q Consensus        43 gIvHrDLKP~NILld~~~~vKL~DFGla~   71 (503)
                      .++|+|+.|.||+++.++ +.++||..+.
T Consensus       147 ~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~  174 (256)
T TIGR02721       147 APLHMDVHAYNLVVTPQG-LKLIDWEYAS  174 (256)
T ss_pred             eeecCCCCcCcEEEeCCC-CEEEeccccC
Confidence            489999999999999876 7899998664

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PLN02236 choline kinase

Probab=84.74  E-value=1  Score=46.94  Aligned_cols=29  Identities=17%  Similarity=0.183  Sum_probs=25.1

Q ss_pred             CCeecccCCCcEEEcc-CCcEEEEecCCcc
Q 010713           43 GILVLNLKPFNFILNE-ADRAVLGDVGIPH   71 (503)
Q Consensus        43 gIvHrDLKP~NILld~-~~~vKL~DFGla~   71 (503)
                      .++|+|+++.|||+++ ++.+.++||..+.
T Consensus       201 ~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~  230 (344)
T PLN02236        201 GFCHNDLQYGNIMIDEETRAITIIDYEYAS  230 (344)
T ss_pred             eEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence            5899999999999986 4679999998653

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=84.74  E-value=1.8  Score=41.37  Aligned_cols=30  Identities=20%  Similarity=0.183  Sum_probs=21.0

Q ss_pred             CCeecccCCCcEEE-ccCCcEEEEecCCccc
Q 010713           43 GILVLNLKPFNFIL-NEADRAVLGDVGIPHL   72 (503)
Q Consensus        43 gIvHrDLKP~NILl-d~~~~vKL~DFGla~~   72 (503)
                      -++|+|+.|.||++ +.++.++++||..+..
T Consensus       144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  144 VFCHNDLNPGNILINNKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             EEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred             eEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence            48999999999999 7889999999987643

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=84.54  E-value=0.79  Score=45.33  Aligned_cols=37  Identities=19%  Similarity=0.181  Sum_probs=32.0

Q ss_pred             HHHHHHHHHC--CCeecccCCCcEEEccCCcEEEEecCC
Q 010713           33 AQGILQLHSK--GILVLNLKPFNFILNEADRAVLGDVGI   69 (503)
Q Consensus        33 l~aL~yLHs~--gIvHrDLKP~NILld~~~~vKL~DFGl   69 (503)
                      +++|.-.|+.  +.+|+|..|+|||-|..|.+||.|-+.
T Consensus       151 i~~L~~fH~~~~~~lHGD~np~NiM~D~~G~lKlVDP~~  189 (308)
T PF07387_consen  151 IKDLMDFHSENQHCLHGDCNPDNIMCDKFGYLKLVDPVC  189 (308)
T ss_pred             HHHHHHhhccCCCeecCCCChhheeecCCCCEEecChhh
Confidence            4667888843  699999999999999999999999764

The function of this family is unknown.

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=83.65  E-value=1.5  Score=45.72  Aligned_cols=27  Identities=19%  Similarity=0.249  Sum_probs=24.4

Q ss_pred             CeecccCCCcEEEccCCc-EEEEecCCc
Q 010713           44 ILVLNLKPFNFILNEADR-AVLGDVGIP   70 (503)
Q Consensus        44 IvHrDLKP~NILld~~~~-vKL~DFGla   70 (503)
                      +||+|+.|.||+++.+.. +.++||+-+
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa  226 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGFIDFDDA  226 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeEEEcccc
Confidence            999999999999998875 889999955

>PF15057 DUF4537: Domain of unknown function (DUF4537)

Probab=83.60  E-value=3.2  Score=36.94  Aligned_cols=88  Identities=20%  Similarity=0.188  Sum_probs=66.4

Q ss_pred             CceeEeecccccCCCcccceeecCCCCeEEeecccccccccCCcchh----hccccccccEEEeecccccccccCCcccC
Q 010713          290 GDWVRLKEEDRRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQ----MAESYCVGQFVRLKANVVSPQFEWPRKRE  365 (503)
Q Consensus       290 ~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (503)
                      |.||-+|.|++.+=--|.+.+.-+.|.+.|-|-..++-..-...=++    |--++++||+|-.+         |+....
T Consensus         1 g~~VlAR~~~DG~YY~GtV~~~~~~~~~lV~f~~~~~~~v~~~~iI~~~~~~~~~L~~GD~VLA~---------~~~~~~   71 (124)
T PF15057_consen    1 GQKVLARREEDGFYYPGTVKKCVSSGQFLVEFDDGDTQEVPISDIIALSDAMRHSLQVGDKVLAP---------WEPDDC   71 (124)
T ss_pred             CCeEEEeeCCCCcEEeEEEEEccCCCEEEEEECCCCEEEeChHHeEEccCcccCcCCCCCEEEEe---------cCcCCC
Confidence            78999999999888889999888999999999554444443322222    23569999998766         654444


Q ss_pred             CcceeeeEEE-----EecCCeEEEecC
Q 010713          366 GVWATGRICM-----VVPNGCLIVRFP  387 (503)
Q Consensus       366 ~~~~~~~~~~-----~~~~~~~~~~~~  387 (503)
                       .|.-|+|..     ...+..++|.|-
T Consensus        72 -~Y~Pg~V~~~~~~~~~~~~~~~V~f~   97 (124)
T PF15057_consen   72 -RYGPGTVIAGPERRASEDKEYTVRFY   97 (124)
T ss_pred             -EEeCEEEEECccccccCCceEEEEEE
Confidence             388999997     788899999987

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=83.16  E-value=2.1  Score=40.75  Aligned_cols=30  Identities=20%  Similarity=0.169  Sum_probs=24.8

Q ss_pred             CCCeecccCCCcEEEccCC-----cEEEEecCCcc
Q 010713           42 KGILVLNLKPFNFILNEAD-----RAVLGDVGIPH   71 (503)
Q Consensus        42 ~gIvHrDLKP~NILld~~~-----~vKL~DFGla~   71 (503)
                      ..++|||+.+.||++..++     .+.++||..+.
T Consensus       120 ~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~  154 (196)
T smart00587      120 NVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSH  154 (196)
T ss_pred             eEEeeCCCCccceeeccCCCCCccceEEEecccCC
Confidence            3589999999999997553     58899998654

subfamily of choline kinases

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=82.85  E-value=0.94  Score=49.71  Aligned_cols=147  Identities=13%  Similarity=0.159  Sum_probs=82.6

Q ss_pred             CCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC----------CCCCCCcHHHHHHHHHhhhcCCCCCCC
Q 010713          106 ISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP----------PIPSGLPPAVENVLLGCFEYDLRSRPL  175 (503)
Q Consensus       106 ~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~----------~~~~~~s~~l~~LI~~cL~~DP~~RPS  175 (503)
                      ..+++||||+|.++.++.-|...+......+....+..-...+          .+...++..+.++..+|+-..|..||.
T Consensus       108 ~~pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l  187 (725)
T KOG1093|consen  108 IGPKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPL  187 (725)
T ss_pred             CCcchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccc
Confidence            3469999999999999999987776555544444333211111          112346677888999999999999986


Q ss_pred             HHHHH---------HHHHh-hccCcCCCCCCCCCCCcCCCCCCCCCCccccccccccCCCcc--cccCCCCCCCCCCCCC
Q 010713          176 MTDIL---------RVFKS-SQNSVHSDGGWTGHGSRILPDKSSSGYTEWFLSKEDLKVDDV--VRSRKPPNSFKPENMD  243 (503)
Q Consensus       176 ~~elL---------~~L~~-i~~~~~~~~~w~~~~~~~~~~p~~~~~~~~~~s~~~l~~~d~--v~s~~p~~~~~~~~~~  243 (503)
                      ..++.         +.+.. .........+.....    .......|+.|.....+....-.  .-.+...++++.++..
T Consensus       188 ~~~~~k~~i~~ev~~~~t~e~~~~L~~e~~~~~~~----~r~~~~s~~lw~~~g~~~e~~Ll~k~ii~s~~piss~p~~~  263 (725)
T KOG1093|consen  188 PMELSKRCSFTEVYKDLTVEMRAALRKEVANNDLF----ERLVENSYYLWKLAGGDPEIELLKKGIIRSHAPISSLPTVR  263 (725)
T ss_pred             hhHHhcCccHHHHHhhhhHHHHHhhcccccccHHH----HHHHHHHHHHHHHhCCchhHHHHHhhcccccCcccCCCccc
Confidence            55443         33222 011111111111111    11133456677655444321111  1223334667777777


Q ss_pred             CCCCceeeeeecC
Q 010713          244 VPEGRVVGVEHNT  256 (503)
Q Consensus       244 ~~~G~~v~~e~~~  256 (503)
                      ..+|.+++.-++.
T Consensus       264 ~~~~~s~~~g~d~  276 (725)
T KOG1093|consen  264 FDDGLSLDSGRDS  276 (725)
T ss_pred             hhhhhhhcCCCch
Confidence            7888887776665

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=82.76  E-value=0.91  Score=45.86  Aligned_cols=30  Identities=20%  Similarity=0.214  Sum_probs=24.6

Q ss_pred             CCeecccCCCcEEEccCCcE-EEEecCCccc
Q 010713           43 GILVLNLKPFNFILNEADRA-VLGDVGIPHL   72 (503)
Q Consensus        43 gIvHrDLKP~NILld~~~~v-KL~DFGla~~   72 (503)
                      .++|+|++|.||+++.++.+ -|+||+.+..
T Consensus       186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i  216 (276)
T cd05152         186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKV  216 (276)
T ss_pred             eeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence            48999999999999975554 5999997643

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=82.66  E-value=2.1  Score=45.26  Aligned_cols=52  Identities=15%  Similarity=0.090  Sum_probs=44.4

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHC-CCeecccCCCcEEEccCCcEEEEecCCcccc
Q 010713           21 SLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIPHLL   73 (503)
Q Consensus        21 s~~~vl~i~~QIl~aL~yLHs~-gIvHrDLKP~NILld~~~~vKL~DFGla~~~   73 (503)
                      ..+++..++.+.+..++-+..+ ..-|||+...||||+ +|++.|+||-+++..
T Consensus       319 ~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsRl~  371 (488)
T COG5072         319 RSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSRLS  371 (488)
T ss_pred             cHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeeecc
Confidence            4678888888888877777765 589999999999999 999999999999853

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	503
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		4e-09
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		7e-09
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		9e-09
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		2e-08
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		2e-08
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		2e-08
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		2e-08
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		2e-08
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		2e-08
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		2e-08
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		2e-08
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		2e-08
4h58_A	275	Braf In Complex With Compound 3 Length = 275		2e-08
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		3e-08
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		3e-08
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		3e-08
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		3e-08
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		3e-08
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		3e-08
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		3e-08
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		4e-08
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		5e-08
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		1e-07
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		1e-07
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		2e-07
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		3e-07
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		3e-07
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		4e-07
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		4e-07
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		5e-07
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		5e-07
3g51_A	325	Structural Diversity Of The Active Conformation Of		5e-07
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		6e-07
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		8e-07
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		9e-07
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		9e-07
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-06
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-06
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		1e-06
3kmw_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		2e-06
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		2e-06
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		2e-06
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		3e-06
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		6e-06
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		8e-06
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		9e-06
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		1e-05
3kmu_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		1e-05
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		1e-05
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		1e-05
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		2e-05
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		2e-05
2buj_A	317	Crystal Structure Of The Human Serine-Threonine Kin		4e-05
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		4e-05
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		4e-05
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		4e-05
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		4e-05
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		4e-05
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		4e-05
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		4e-05
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		4e-05
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		4e-05
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		4e-05
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		4e-05
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		4e-05
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		5e-05
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		5e-05
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		5e-05
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		5e-05
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		6e-05
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		6e-05
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		6e-05
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		6e-05
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		6e-05
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		6e-05
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		6e-05
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		7e-05
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		7e-05
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		7e-05
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		7e-05
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		1e-04
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		1e-04
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		1e-04
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		2e-04
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		2e-04
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		2e-04
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		2e-04
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		2e-04
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		2e-04
4fie_A	423	Full-Length Human Pak4 Length = 423		2e-04
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		2e-04
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		2e-04
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		2e-04
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		3e-04
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		3e-04
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		3e-04
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		3e-04
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		3e-04
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		3e-04
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		3e-04
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		3e-04
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		3e-04
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		4e-04
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		4e-04
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		5e-04
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		6e-04
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		6e-04
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		7e-04
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		8e-04
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		8e-04
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		8e-04
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		9e-04

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 19/182 (10%)
Query: 9   GDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV 67
           GD M  ++   K  LS    YA ++  G+  LHSKGI+  +LK  N +L++     + D 
Sbjct: 104 GDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADF 163
Query: 68  XXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ 127
                       +++     GTP+Y+APE     +    +   D W F   + EML G  
Sbjct: 164 GMCKENMLGDAKTNEF---CGTPDYIAPEIL---LGQKYNHSVDWWSFGVLLYEMLIGQS 217
Query: 128 PRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCF----------EYDLRSRPLMT 177
           P  G+  +E++ ++  R + P  P  L    +++L+  F            D+R  PL  
Sbjct: 218 PFHGQDEEELFHSI--RMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFR 275
Query: 178 DI 179
           +I
Sbjct: 276 EI 277

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 63/150 (42%), Gaps = 16/150 (10%)
Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
           YA ++A  +  LHS  I+  +LKP N +L+     VL D             +S      
Sbjct: 144 YAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTF---C 200
Query: 88  GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
           GTP Y+APE      + P     D W     + EML G+ P   R+  E+YD ++ +   
Sbjct: 201 GTPEYLAPEVLH---KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK--- 254
Query: 148 PPIPSGLPPAVEN----VLLGCFEYDLRSR 173
              P  L P + N    +L G  + D   R
Sbjct: 255 ---PLQLKPNITNSARHLLEGLLQKDRTKR 281

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 58.5 bits (140), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 21/190 (11%)
Query: 1   MKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M++  G  GD M  ++   K  LS    YA ++  G+  LHSKGI+  +LK  N +L++ 
Sbjct: 97  MEYLNG--GDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKD 154
Query: 60  DRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
               + D             ++      GTP+Y+APE     +    +   D W F   +
Sbjct: 155 GHIKIADFGMCKENMLGDAKTNXF---CGTPDYIAPEIL---LGQKYNHSVDWWSFGVLL 208
Query: 120 IEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCF----------EYD 169
            EML G  P  G+  +E++ ++  R + P  P  L    +++L+  F            D
Sbjct: 209 YEMLIGQSPFHGQDEEELFHSI--RMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGD 266
Query: 170 LRSRPLMTDI 179
           +R  PL  +I
Sbjct: 267 IRQHPLFREI 276

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 5/166 (3%)
Query: 19  KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 78
           K  +  +   A   AQG+  LH+K I+  +LK  N  L+E     +GD            
Sbjct: 128 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG 187
Query: 79  XSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEI 137
            S    +  G+  +MAPE  + + + P SF++D + F   + E++TG  P     + D+I
Sbjct: 188 -SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 246
Query: 138 YDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
              V R     ++  + S  P A++ ++  C +     RPL   IL
Sbjct: 247 IFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 292

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 5/180 (2%)
Query: 5   EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
           EGS       +   K  +  +   A   AQG+  LH+K I+  +LK  N  L+E     +
Sbjct: 91  EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 150
Query: 65  GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
           GD             S    +  G+  +MAPE  + + + P SF++D + F   + E++T
Sbjct: 151 GDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 209
Query: 125 GVQPRCG-RSVDEIYDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
           G  P     + D+I   V R     ++  + S  P A++ ++  C +     RPL   IL
Sbjct: 210 GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 269

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 5/180 (2%)
Query: 5   EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
           EGS       +   K  +  +   A   AQG+  LH+K I+  +LK  N  L+E     +
Sbjct: 88  EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 147
Query: 65  GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
           GD             S    +  G+  +MAPE  + + + P SF++D + F   + E++T
Sbjct: 148 GDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 206
Query: 125 GVQPRCG-RSVDEIYDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
           G  P     + D+I   V R     ++  + S  P A++ ++  C +     RPL   IL
Sbjct: 207 GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 266

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 5/180 (2%)
Query: 5   EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
           EGS       +   K  +  +   A   AQG+  LH+K I+  +LK  N  L+E     +
Sbjct: 114 EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 173
Query: 65  GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
           GD             S    +  G+  +MAPE  + + + P SF++D + F   + E++T
Sbjct: 174 GDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 232
Query: 125 GVQPRCG-RSVDEIYDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
           G  P     + D+I   V R     ++  + S  P A++ ++  C +     RPL   IL
Sbjct: 233 GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 292

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 5/180 (2%)
Query: 5   EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
           EGS       +   K  +  +   A   AQG+  LH+K I+  +LK  N  L+E     +
Sbjct: 106 EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 165
Query: 65  GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
           GD             S    +  G+  +MAPE  + + + P SF++D + F   + E++T
Sbjct: 166 GDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 224
Query: 125 GVQPRCG-RSVDEIYDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
           G  P     + D+I   V R     ++  + S  P A++ ++  C +     RPL   IL
Sbjct: 225 GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 284

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 5/180 (2%)
Query: 5   EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
           EGS       +   K  +  +   A   AQG+  LH+K I+  +LK  N  L+E     +
Sbjct: 91  EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 150
Query: 65  GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
           GD             S    +  G+  +MAPE  + + + P SF++D + F   + E++T
Sbjct: 151 GDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 209
Query: 125 GVQPRCG-RSVDEIYDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
           G  P     + D+I   V R     ++  + S  P A++ ++  C +     RPL   IL
Sbjct: 210 GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 269

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 5/180 (2%)
Query: 5   EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
           EGS       +   K  +  +   A   AQG+  LH+K I+  +LK  N  L+E     +
Sbjct: 113 EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 172
Query: 65  GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
           GD             S    +  G+  +MAPE  + + + P SF++D + F   + E++T
Sbjct: 173 GDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 231
Query: 125 GVQPRCG-RSVDEIYDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
           G  P     + D+I   V R     ++  + S  P A++ ++  C +     RPL   IL
Sbjct: 232 GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 291

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 5/180 (2%)
Query: 5   EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
           EGS       +   K  +  +   A   AQG+  LH+K I+  +LK  N  L+E     +
Sbjct: 86  EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 145
Query: 65  GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
           GD             S    +  G+  +MAPE  + + + P SF++D + F   + E++T
Sbjct: 146 GDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
Query: 125 GVQPRCG-RSVDEIYDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
           G  P     + D+I   V R     ++  + S  P A++ ++  C +     RPL   IL
Sbjct: 205 GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 264

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 5/180 (2%)
Query: 5   EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
           EGS       +   K  +  +   A   AQG+  LH+K I+  +LK  N  L+E     +
Sbjct: 86  EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 145
Query: 65  GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
           GD             S    +  G+  +MAPE  + + + P SF++D + F   + E++T
Sbjct: 146 GDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
Query: 125 GVQPRCG-RSVDEIYDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
           G  P     + D+I   V R     ++  + S  P A++ ++  C +     RPL   IL
Sbjct: 205 GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 264

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 5/180 (2%)
Query: 5   EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
           EGS       +   K  +  +   A   AQG+  LH+K I+  +LK  N  L+E     +
Sbjct: 86  EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKI 145
Query: 65  GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
           GD             S    +  G+  +MAPE  + + + P SF++D + F   + E++T
Sbjct: 146 GDFGLATVKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
Query: 125 GVQPRCG-RSVDEIYDAVVR---RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
           G  P     + D+I   V R     ++  + S  P A++ ++  C +     RPL   IL
Sbjct: 205 GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 264

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 6   GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
           GS+ DR+ + +G  L L  + RYA+ +A+G+  L SK  +  +L   N +L   D   +G
Sbjct: 105 GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 163
Query: 66  DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 124
           D                   R     + APE  +       S  +D+W F  ++ EM T 
Sbjct: 164 DFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLWEMFTY 220
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
           G +P  G +  +I   + +  E  P P   P  + NV++ C+ +    RP
Sbjct: 221 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 270

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 6   GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
           GS+ DR+ + +G  L L  + RYA+ +A+G+  L SK  +  +L   N +L   D   +G
Sbjct: 99  GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 157
Query: 66  DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 124
           D                   R     + APE  +       S  +D+W F  ++ EM T 
Sbjct: 158 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLWEMFTY 214
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
           G +P  G +  +I   + +  E  P P   P  + NV++ C+ +    RP
Sbjct: 215 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 264

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 6   GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
           GS+ DR+ + +G  L L  + RYA+ +A+G+  L SK  +  +L   N +L   D   +G
Sbjct: 95  GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 153
Query: 66  DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 124
           D                   R     + APE  +       S  +D+W F  ++ EM T 
Sbjct: 154 DFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLWEMFTY 210
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
           G +P  G +  +I   + +  E  P P   P  + NV++ C+ +    RP
Sbjct: 211 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 9/150 (6%)
Query: 1   MKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M+F  G  GD M  + K  +   +    YA ++   ++ LH KGI+  +LK  N +L+  
Sbjct: 103 MEFVNG--GDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHE 160
Query: 60  DRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
               L D             ++      GTP+Y+APE  Q  + GP     D W     +
Sbjct: 161 GHCKLADFGMCKEGICNGVTTATF---CGTPDYIAPEILQEMLYGP---AVDWWAMGVLL 214
Query: 120 IEMLTGVQPRCGRSVDEIYDAVVRRQEIPP 149
            EML G  P    + D++++A++  + + P
Sbjct: 215 YEMLCGHAPFEAENEDDLFEAILNDEVVYP 244

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 6   GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
           GS+ DR+ + +G  L L  + RYA+ +A+G+  L SK  +  +L   N +L   D   +G
Sbjct: 99  GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 157
Query: 66  DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 124
           D                   R     + APE  +       S  +D+W F  ++ EM T 
Sbjct: 158 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLWEMFTY 214
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
           G +P  G +  +I   + +  E  P P   P  + NV++ C+ +    RP
Sbjct: 215 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 264

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 6   GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
           GS+ DR+ + +G  L L  + RYA+ +A+G+  L SK  +  +L   N +L   D   +G
Sbjct: 95  GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 153
Query: 66  DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 124
           D                   R     + APE  +       S  +D+W F  ++ EM T 
Sbjct: 154 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLWEMFTY 210
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
           G +P  G +  +I   + +  E  P P   P  + NV++ C+ +    RP
Sbjct: 211 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 6   GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
           GS+ DR+ + +G  L L  + RYA+ +A+G+  L SK  +  +L   N +L   D   +G
Sbjct: 105 GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 163
Query: 66  DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 124
           D                   R     + APE  +       S  +D+W F  ++ EM T 
Sbjct: 164 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLWEMFTY 220
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
           G +P  G +  +I   + +  E  P P   P  + NV++ C+ +    RP
Sbjct: 221 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 270

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 6   GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
           GS+ DR+ + +G  L L  + RYA+ +A+G+  L SK  +  +L   N +L   D   +G
Sbjct: 95  GSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 153
Query: 66  DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 124
           D                   R     + APE  +       S  +D+W F  ++ EM T 
Sbjct: 154 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---FSHASDTWMFGVTLWEMFTY 210
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
           G +P  G +  +I   + +  E  P P   P  + NV++ C+ +    RP
Sbjct: 211 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 83/190 (43%), Gaps = 5/190 (2%)
Query: 5   EGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
           EGS   +   ++  K  +  +   A   AQG+  LH+K I+  ++K  N  L+E     +
Sbjct: 114 EGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKI 173
Query: 65  GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
           GD             S  + +  G+  +MAPE  + +   P SF++D + +   + E++T
Sbjct: 174 GDFGLATVKSRWSG-SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMT 232
Query: 125 GVQPRCG-RSVDEIYDAVVRRQEIPPIP---SGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
           G  P     + D+I   V R    P +       P A++ ++  C +     RPL   IL
Sbjct: 233 GELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQIL 292
Query: 181 RVFKSSQNSV 190
              +  Q+S+
Sbjct: 293 SSIELLQHSL 302

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 5/166 (3%)
Query: 19  KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 78
           K  +  +   A   A+G+  LH+K I+  +LK  N  L+E +   +GD            
Sbjct: 116 KFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175
Query: 79  XSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEI 137
            S    +  G+  +MAPE  + +   P SF++D + F   + E++TG  P     + D+I
Sbjct: 176 -SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 234
Query: 138 YDAVVRRQ---EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
            + V R     ++  + S  P  ++ ++  C +     RP    IL
Sbjct: 235 IEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL 280

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 5/166 (3%)
Query: 19  KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 78
           K  +  +   A   A+G+  LH+K I+  +LK  N  L+E +   +GD            
Sbjct: 116 KFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175
Query: 79  XSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEI 137
            S    +  G+  +MAPE  + +   P SF++D + F   + E++TG  P     + D+I
Sbjct: 176 -SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 234
Query: 138 YDAVVRRQ---EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
            + V R     ++  + S  P  ++ ++  C +     RP    IL
Sbjct: 235 IEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL 280

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 5/166 (3%)
Query: 19  KLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 78
           K  +  +   A   A+G+  LH+K I+  +LK  N  L+E +   +GD            
Sbjct: 104 KFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSG 163
Query: 79  XSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEI 137
            S    +  G+  +MAPE  + +   P SF++D + F   + E++TG  P     + D+I
Sbjct: 164 -SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 222
Query: 138 YDAVVRRQ---EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
            + V R     ++  + S  P  ++ ++  C +     RP    IL
Sbjct: 223 IEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL 268

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 13/145 (8%)
Query: 1   MKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M++  G  GD M  ++  G+    +   YA ++A G+  L SKGI+  +LK  N +L+  
Sbjct: 421 MEYVNG--GDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSE 478
Query: 60  DRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPE--QWQPEVRGPISFETDSWGFAC 117
               + D             +       GTP+Y+APE   +QP  +       D W F  
Sbjct: 479 GHIKIADFGMCKENIWDGVTTKXF---CGTPDYIAPEIIAYQPYGKS-----VDWWAFGV 530
Query: 118 SIIEMLTGVQPRCGRSVDEIYDAVV 142
            + EML G  P  G   DE++ +++
Sbjct: 531 LLYEMLAGQAPFEGEDEDELFQSIM 555

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 10/164 (6%)
Query: 24  NVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDL 83
            V++Y + L   +  +HS+ ++  ++KP N  +       LGD+            +  L
Sbjct: 137 TVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL 196
Query: 84  PRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV-- 141
              +GTP YM+PE+         +F++D W   C + EM     P  G  ++ +Y     
Sbjct: 197 ---VGTPYYMSPERIH---ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLCKK 249
Query: 142 VRRQEIPPIPSG-LPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
           + + + PP+PS      +  ++  C   D   RP +T +  V K
Sbjct: 250 IEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAK 293

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 11/144 (7%)
Query: 9   GDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV 67
           GD M  ++  G+    +   YA ++A G+  L SKGI+  +LK  N +L+      + D 
Sbjct: 106 GDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADF 165
Query: 68  XXXXXXXXXXXXSSDLPRRLGTPNYMAPE--QWQPEVRGPISFETDSWGFACSIIEMLTG 125
                       +       GTP+Y+APE   +QP  +       D W F   + EML G
Sbjct: 166 GMCKENIWDGVTTKXF---CGTPDYIAPEIIAYQPYGKS-----VDWWAFGVLLYEMLAG 217
Query: 126 VQPRCGRSVDEIYDAVVRRQEIPP 149
             P  G   DE++ +++      P
Sbjct: 218 QAPFEGEDEDELFQSIMEHNVAYP 241

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 59/140 (42%), Gaps = 8/140 (5%)
Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
           Y  +LA  +  LHS GI+  +LKP N +L+E     L D             +       
Sbjct: 132 YLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF---C 188
Query: 88  GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
           GT  YMAPE      RG      D W F   + EMLTG  P  G+   E    +++ +  
Sbjct: 189 GTVEYMAPEVVNR--RGHTQ-SADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK-- 243
Query: 148 PPIPSGLPPAVENVLLGCFE 167
             +P  L P  +++L   F+
Sbjct: 244 LGMPQFLSPEAQSLLRMLFK 263

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 59/140 (42%), Gaps = 8/140 (5%)
Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
           Y  +LA  +  LHS GI+  +LKP N +L+E     L D             +       
Sbjct: 131 YLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF---C 187
Query: 88  GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
           GT  YMAPE      RG      D W F   + EMLTG  P  G+   E    +++ +  
Sbjct: 188 GTVEYMAPEVVNR--RGHTQ-SADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK-- 242
Query: 148 PPIPSGLPPAVENVLLGCFE 167
             +P  L P  +++L   F+
Sbjct: 243 LGMPQFLSPEAQSLLRMLFK 262

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 1   MKFYEGSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M++  G  GD M  ++  GK        YA +++ G+  LH +GI+  +LK  N +L+  
Sbjct: 99  MEYVNG--GDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSE 156
Query: 60  DRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPE--QWQPEVRGPISFETDSWGFAC 117
               + D             + +     GTP+Y+APE   +QP  +       D W +  
Sbjct: 157 GHIKIADFGMCKEHMMDGVTTREF---CGTPDYIAPEIIAYQPYGKS-----VDWWAYGV 208
Query: 118 SIIEMLTGVQPRCGRSVDEIYDAVVRR 144
            + EML G  P  G   DE++ +++  
Sbjct: 209 LLYEMLAGQPPFDGEDEDELFQSIMEH 235

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 70/166 (42%), Gaps = 9/166 (5%)
Query: 9   GDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV 67
           GD   +L K    +  +V  Y  +LA  +  LHS GI+  +LKP N +L+E     L D 
Sbjct: 111 GDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDF 170
Query: 68  XXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ 127
                       +       GT  YMAPE      RG      D W F   + EMLTG  
Sbjct: 171 GLSKESIDHEKKAYSF---CGTVEYMAPEVVNR--RGHTQ-SADWWSFGVLMFEMLTGTL 224
Query: 128 PRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
           P  G+   E    +++ +    +P  L P  +++L   F+ +  +R
Sbjct: 225 PFQGKDRKETMTMILKAK--LGMPQFLSPEAQSLLRMLFKRNPANR 268

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 67/160 (41%), Gaps = 9/160 (5%)
Query: 9   GDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV 67
           GD   +L K    +  +V  Y  +LA G+  LHS GI+  +LKP N +L+E     L D 
Sbjct: 115 GDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDF 174
Query: 68  XXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ 127
                       +       GT  YMAPE      R   S   D W +   + EMLTG  
Sbjct: 175 GLSKEAIDHEKKAYSF---CGTVEYMAPEVVN---RQGHSHSADWWSYGVLMFEMLTGSL 228
Query: 128 PRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFE 167
           P  G+   E    +++ +    +P  L    +++L   F+
Sbjct: 229 PFQGKDRKETMTLILKAK--LGMPQFLSTEAQSLLRALFK 266

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 8/153 (5%)
Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
           Y   +  G   LH   ++  +LK  N  LNE     +GD                L    
Sbjct: 122 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL---C 178
Query: 88  GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
           GTPNY+APE    +     SFE D W   C +  +L G  P     + E Y  + + +  
Sbjct: 179 GTPNYIAPEVLSKKGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY- 234
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
             IP  + P   +++    + D  +RP + ++L
Sbjct: 235 -SIPKHINPVAASLIQKMLQTDPTARPTINELL 266

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 8/153 (5%)
Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
           Y   +  G   LH   ++  +LK  N  LNE     +GD                L    
Sbjct: 122 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL---C 178
Query: 88  GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
           GTPNY+APE    +     SFE D W   C +  +L G  P     + E Y  + + +  
Sbjct: 179 GTPNYIAPEVLSKKGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY- 234
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
             IP  + P   +++    + D  +RP + ++L
Sbjct: 235 -SIPKHINPVAASLIQKMLQTDPTARPTINELL 266

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 8/153 (5%)
Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
           Y   +  G   LH   ++  +LK  N  LNE     +GD                L    
Sbjct: 126 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL---C 182
Query: 88  GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
           GTPNY+APE    +     SFE D W   C +  +L G  P     + E Y  + + +  
Sbjct: 183 GTPNYIAPEVLSKKGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY- 238
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
             IP  + P   +++    + D  +RP + ++L
Sbjct: 239 -SIPKHINPVAASLIQKMLQTDPTARPTINELL 270

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 8/147 (5%)
Query: 34  QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 93
           QG+  LH+  ++  +LK  N  LN+     +GD               DL    GTPNY+
Sbjct: 153 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL---CGTPNYI 209
Query: 94  APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 153
           APE      +   SFE D W   C +  +L G  P     + E Y  + + +    +P  
Sbjct: 210 APEVL---CKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY--SVPRH 264
Query: 154 LPPAVENVLLGCFEYDLRSRPLMTDIL 180
           + P    ++      D   RP + ++L
Sbjct: 265 INPVASALIRRMLHADPTLRPSVAELL 291

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 8/147 (5%)
Query: 34  QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 93
           QG+  LH+  ++  +LK  N  LN+     +GD               DL    GTPNY+
Sbjct: 137 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL---CGTPNYI 193
Query: 94  APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 153
           APE      +   SFE D W   C +  +L G  P     + E Y  + + +    +P  
Sbjct: 194 APEVL---CKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY--SVPRH 248
Query: 154 LPPAVENVLLGCFEYDLRSRPLMTDIL 180
           + P    ++      D   RP + ++L
Sbjct: 249 INPVASALIRRMLHADPTLRPSVAELL 275

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 8/153 (5%)
Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
           Y   +  G   LH   ++  +LK  N  LNE     +GD                L    
Sbjct: 120 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL---C 176
Query: 88  GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
           GTPNY+APE    +     SFE D W   C +  +L G  P     + E Y  + + +  
Sbjct: 177 GTPNYIAPEVLSKKGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY- 232
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
             IP  + P   +++    + D  +RP + ++L
Sbjct: 233 -SIPKHINPVAASLIQKMLQTDPTARPTINELL 264

>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 69/170 (40%), Gaps = 14/170 (8%)
Query: 23  SNVFRYAIDLAQGILQLHSKGILV----LNLKPFNFILNEADRAVLGDVXXXXXXXXXXX 78
           S   ++A+D+A+G+  LH+   L+    LN +      +   R  + DV           
Sbjct: 111 SQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKF--------- 161
Query: 79  XSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIY 138
            S   P R+  P ++APE  Q +         D W FA  + E++T   P    S  EI 
Sbjct: 162 -SFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIG 220
Query: 139 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN 188
             V      P IP G+ P V  ++  C   D   RP    I+ + +  Q+
Sbjct: 221 MKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 8/153 (5%)
Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
           Y   +  G   LH   ++  +LK  N  LNE     +GD                L    
Sbjct: 144 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL---C 200
Query: 88  GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
           GTPNY+APE    +     SFE D W   C +  +L G  P     + E Y  + + +  
Sbjct: 201 GTPNYIAPEVLSKKGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY- 256
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
             IP  + P   +++    + D  +RP + ++L
Sbjct: 257 -SIPKHINPVAASLIQKMLQTDPTARPTINELL 288

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 8/153 (5%)
Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
           Y   +  G   LH   ++  +LK  N  LNE     +GD                L    
Sbjct: 146 YLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL---C 202
Query: 88  GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
           GTPNY+APE    +     SFE D W   C +  +L G  P     + E Y  + + +  
Sbjct: 203 GTPNYIAPEVLSKKGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY- 258
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
             IP  + P   +++    + D  +RP + ++L
Sbjct: 259 -SIPKHINPVAASLIQKMLQTDPTARPTINELL 290

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/174 (22%), Positives = 70/174 (40%), Gaps = 10/174 (5%)
Query: 18  GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
           G ++         D  Q +   H  GI+  ++KP N +++  +   + D           
Sbjct: 111 GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 78  XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
              +     +GT  Y++PEQ + +    +   +D +   C + E+LTG  P  G S D +
Sbjct: 171 NSVTQTAAVIGTAQYLSPEQARGD---SVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSV 227
Query: 138 YDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDLRSR-----PLMTDILRVFK 184
               VR   IPP     GL   ++ V+L     +  +R      +  D++RV  
Sbjct: 228 AYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 6/120 (5%)
Query: 20  LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXX-XXXXXX 78
           +S ++V R    + +G+  LH   I+ L+LKP N +L+      LGD+            
Sbjct: 128 VSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSI--YPLGDIKIVDFGMSRKIG 185
Query: 79  XSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIY 138
            + +L   +GTP Y+APE    +   PI+  TD W        +LT   P  G    E Y
Sbjct: 186 HACELREIMGTPEYLAPEILNYD---PITTATDMWNIGIIAYMLLTHTSPFVGEDNQETY 242

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 8/147 (5%)
Query: 34  QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 93
           QG+  LH+  ++  +LK  N  LN+     +GD                L    GTPNY+
Sbjct: 153 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTL---CGTPNYI 209
Query: 94  APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 153
           APE      +   SFE D W   C +  +L G  P     + E Y  + + +    +P  
Sbjct: 210 APEVL---CKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY--SVPRH 264
Query: 154 LPPAVENVLLGCFEYDLRSRPLMTDIL 180
           + P    ++      D   RP + ++L
Sbjct: 265 INPVASALIRRMLHADPTLRPSVAELL 291

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 8/147 (5%)
Query: 34  QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYM 93
           QG+  LH+  ++  +LK  N  LN+     +GD                L    GTPNY+
Sbjct: 153 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXL---CGTPNYI 209
Query: 94  APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 153
           APE      +   SFE D W   C +  +L G  P     + E Y  + + +    +P  
Sbjct: 210 APEVL---CKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY--SVPRH 264
Query: 154 LPPAVENVLLGCFEYDLRSRPLMTDIL 180
           + P    ++      D   RP + ++L
Sbjct: 265 INPVASALIRRMLHADPTLRPSVAELL 291

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 7/123 (5%)
Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
           Y  +++  +  LH KGI+  +LKP N +LN      L D             +       
Sbjct: 126 YLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTF---C 182
Query: 88  GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR-RQE 146
           GT  YMAPE     +R   +   D W     + +MLTG  P  G +  +  D +++ +  
Sbjct: 183 GTIEYMAPEIL---MRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN 239
Query: 147 IPP 149
           +PP
Sbjct: 240 LPP 242

>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Apo) Length = 271

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 71/187 (37%), Gaps = 14/187 (7%)
Query: 6   GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILV----LNLKPFNFILNEADR 61
           GS+ + + +     +  S   ++A+D A+G   LH+   L+    LN +      +   R
Sbjct: 94  GSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHALNSRSVXIDEDXTAR 153
Query: 62  AVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIE 121
               DV            S   P R   P ++APE  Q +         D W FA  + E
Sbjct: 154 ISXADVKF----------SFQSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWE 203
Query: 122 MLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
           ++T   P    S  EI   V      P IP G+ P V  +   C   D   RP    I+ 
Sbjct: 204 LVTREVPFADLSNXEIGXKVALEGLRPTIPPGISPHVSKLXKICXNEDPAKRPKFDXIVP 263
Query: 182 VFKSSQN 188
           + +  Q+
Sbjct: 264 ILEKXQD 270

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 7/123 (5%)
Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
           Y  +++  +  LH KGI+  +LKP N +LN      L D             +       
Sbjct: 126 YLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXF---C 182
Query: 88  GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR-RQE 146
           GT  YMAPE     +R   +   D W     + +MLTG  P  G +  +  D +++ +  
Sbjct: 183 GTIEYMAPEIL---MRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN 239
Query: 147 IPP 149
           +PP
Sbjct: 240 LPP 242

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 16/186 (8%)
Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXX 75
           K G L  S +     ++ +G+  LH  G +  ++K  N +L E     + D         
Sbjct: 114 KSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLAT 173
Query: 76  XXXXSSDLPRR--LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS 133
               + +  R+  +GTP +MAPE  + +VRG   F+ D W F  + IE+ TG  P     
Sbjct: 174 GGDITRNKVRKTFVGTPCWMAPEVME-QVRG-YDFKADIWSFGITAIELATGAAPYHKYP 231
Query: 134 VDEIYDAVVRRQEIPPIPSGLP---------PAVENVLLGCFEYDLRSRPLMTDILR--V 182
             ++   +  + + P + +G+           +   ++  C + D   RP   ++LR   
Sbjct: 232 PMKVL-MLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKF 290
Query: 183 FKSSQN 188
           F+ ++N
Sbjct: 291 FQKAKN 296

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 12/125 (9%)
Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
           YA ++   +  LHSK I+  +LKP N +L++     + D               D+   L
Sbjct: 111 YAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYV-------PDVTYXL 163
Query: 88  -GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ- 145
            GTP+Y+APE    +   P +   D W F   I EML G  P    +  + Y+ ++  + 
Sbjct: 164 CGTPDYIAPEVVSTK---PYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAEL 220
Query: 146 EIPPI 150
             PP 
Sbjct: 221 RFPPF 225

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 14/177 (7%)
Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXX 75
           K G L  S +     ++ +G+  LH  G +  ++K  N +L E     + D         
Sbjct: 109 KSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLAT 168
Query: 76  XXXXSSDLPRR--LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS 133
               + +  R+  +GTP +MAPE  + +VRG   F+ D W F  + IE+ TG  P     
Sbjct: 169 GGDITRNKVRKTFVGTPCWMAPEVME-QVRG-YDFKADIWSFGITAIELATGAAPYHKYP 226
Query: 134 VDEIYDAVVRRQEIPPIPSGLP---------PAVENVLLGCFEYDLRSRPLMTDILR 181
             ++   +  + + P + +G+           +   ++  C + D   RP   ++LR
Sbjct: 227 PMKVL-MLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 282

>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 79/195 (40%), Gaps = 11/195 (5%)
Query: 3   FYEGSVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           F  G++ + + +LK  G  L+   +    + + +G+  +H+KG    +LKP N +L +  
Sbjct: 112 FKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEG 171
Query: 61  RAVLGDVXXXXXXXXXXXXS------SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWG 114
           + VL D+            S       D   +  T +Y APE +  +    I   TD W 
Sbjct: 172 QPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWS 231
Query: 115 FACSIIEMLTGVQPR--CGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 172
             C +  M+ G  P     +  D +  AV  +  IP  P     A+  +L      D   
Sbjct: 232 LGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRH-SSALWQLLNSMMTVDPHQ 290
Query: 173 RPLMTDILRVFKSSQ 187
           RP +  +L   ++ Q
Sbjct: 291 RPHIPLLLSQLEALQ 305

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 14  QLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXX 73
           Q++   L L+++  YA  L+  +  L SK  +  ++   N +++  D   LGD       
Sbjct: 107 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166
Query: 74  XXXXXXSSD---LPRRLGTPNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT- 124
                  +    LP +     +MAPE         I+F      +D W F   + E+L  
Sbjct: 167 EDSTYYKASKGKLPIK-----WMAPES--------INFRRFTSASDVWMFGVCMWEILMH 213
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
           GV+P  G   +++   +   + +P +P   PP + +++  C+ YD   RP  T++
Sbjct: 214 GVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 267

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/174 (21%), Positives = 69/174 (39%), Gaps = 10/174 (5%)
Query: 18  GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
           G ++         D  Q +   H  GI+  ++KP N +++  +   + D           
Sbjct: 128 GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 187
Query: 78  XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
              +     +GT  Y++PEQ + +    +   +D +   C + E+LTG  P  G S   +
Sbjct: 188 NSVTQTAAVIGTAQYLSPEQARGD---SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 244
Query: 138 YDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDLRSR-----PLMTDILRVFK 184
               VR   IPP     GL   ++ V+L     +  +R      +  D++RV  
Sbjct: 245 AYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 298

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 14  QLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXX 73
           Q++   L L+++  YA  L+  +  L SK  +  ++   N +++  D   LGD       
Sbjct: 105 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 164
Query: 74  XXXXXXSSD---LPRRLGTPNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT- 124
                  +    LP +     +MAPE         I+F      +D W F   + E+L  
Sbjct: 165 EDSTYYKASKGKLPIK-----WMAPES--------INFRRFTSASDVWMFGVCMWEILMH 211
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
           GV+P  G   +++   +   + +P +P   PP + +++  C+ YD   RP  T++
Sbjct: 212 GVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 265

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 14  QLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXX 73
           Q++   L L+++  YA  L+  +  L SK  +  ++   N +++  D   LGD       
Sbjct: 102 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM 161
Query: 74  XXXXXXSSD---LPRRLGTPNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT- 124
                  +    LP +     +MAPE         I+F      +D W F   + E+L  
Sbjct: 162 EDSTYYKASKGKLPIK-----WMAPES--------INFRRFTSASDVWMFGVCMWEILMH 208
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
           GV+P  G   +++   +   + +P +P   PP + +++  C+ YD   RP  T++
Sbjct: 209 GVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 14  QLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXX 73
           Q++   L L+++  YA  L+  +  L SK  +  ++   N +++  D   LGD       
Sbjct: 130 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 189
Query: 74  XXXXXXSSD---LPRRLGTPNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT- 124
                  +    LP +     +MAPE         I+F      +D W F   + E+L  
Sbjct: 190 EDSTYYKASKGKLPIK-----WMAPES--------INFRRFTSASDVWMFGVCMWEILMH 236
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
           GV+P  G   +++   +   + +P +P   PP + +++  C+ YD   RP  T++
Sbjct: 237 GVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 290

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
           YA ++  G+  LH + I+  +LKP N +L++     + D+               +  R+
Sbjct: 291 YAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDL----GLAVHVPEGQTIKGRV 346
Query: 88  GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
           GT  YMAPE  + E     +F  D W   C + EM+ G  P
Sbjct: 347 GTVGYMAPEVVKNER---YTFSPDWWALGCLLYEMIAGQSP 384

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
           YA ++  G+  LH + I+  +LKP N +L++     + D+               +  R+
Sbjct: 291 YAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDL----GLAVHVPEGQTIKGRV 346
Query: 88  GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
           GT  YMAPE  + E     +F  D W   C + EM+ G  P
Sbjct: 347 GTVGYMAPEVVKNER---YTFSPDWWALGCLLYEMIAGQSP 384

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/174 (21%), Positives = 69/174 (39%), Gaps = 10/174 (5%)
Query: 18  GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
           G ++         D  Q +   H  GI+  ++KP N +++  +   + D           
Sbjct: 111 GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 78  XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
              +     +GT  Y++PEQ + +    +   +D +   C + E+LTG  P  G S   +
Sbjct: 171 NSVTQTAAVIGTAQYLSPEQARGD---SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
Query: 138 YDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDLRSR-----PLMTDILRVFK 184
               VR   IPP     GL   ++ V+L     +  +R      +  D++RV  
Sbjct: 228 AYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 14  QLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXX 73
           Q++   L L+++  YA  L+  +  L SK  +  ++   N +++  D   LGD       
Sbjct: 104 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 163
Query: 74  XXXXXXSSD---LPRRLGTPNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT- 124
                  +    LP +     +MAPE         I+F      +D W F   + E+L  
Sbjct: 164 EDSTYYKASKGKLPIK-----WMAPES--------INFRRFTSASDVWMFGVCMWEILMH 210
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
           GV+P  G   +++   +   + +P +P   PP + +++  C+ YD   RP  T++
Sbjct: 211 GVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 264

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/174 (21%), Positives = 69/174 (39%), Gaps = 10/174 (5%)
Query: 18  GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
           G ++         D  Q +   H  GI+  ++KP N +++  +   + D           
Sbjct: 111 GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 78  XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
              +     +GT  Y++PEQ + +    +   +D +   C + E+LTG  P  G S   +
Sbjct: 171 NSVTQTAAVIGTAQYLSPEQARGD---SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
Query: 138 YDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDLRSR-----PLMTDILRVFK 184
               VR   IPP     GL   ++ V+L     +  +R      +  D++RV  
Sbjct: 228 AYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/174 (21%), Positives = 69/174 (39%), Gaps = 10/174 (5%)
Query: 18  GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
           G ++         D  Q +   H  GI+  ++KP N +++  +   + D           
Sbjct: 111 GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 78  XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
              +     +GT  Y++PEQ + +    +   +D +   C + E+LTG  P  G S   +
Sbjct: 171 NSVTQTAAVIGTAQYLSPEQARGD---SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
Query: 138 YDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDLRSR-----PLMTDILRVFK 184
               VR   IPP     GL   ++ V+L     +  +R      +  D++RV  
Sbjct: 228 AYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 14  QLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXX 73
           Q++   L L+++  YA  L+  +  L SK  +  ++   N +++  D   LGD       
Sbjct: 99  QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 158
Query: 74  XXXXXXSSD---LPRRLGTPNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT- 124
                  +    LP +     +MAPE         I+F      +D W F   + E+L  
Sbjct: 159 EDSTYYKASKGKLPIK-----WMAPES--------INFRRFTSASDVWMFGVCMWEILMH 205
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
           GV+P  G   +++   +   + +P +P   PP + +++  C+ YD   RP  T++
Sbjct: 206 GVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 259

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 14  QLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXX 73
           Q++   L L+++  YA  L+  +  L SK  +  ++   N +++  D   LGD       
Sbjct: 102 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 161
Query: 74  XXXXXXSSD---LPRRLGTPNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT- 124
                  +    LP +     +MAPE         I+F      +D W F   + E+L  
Sbjct: 162 EDSTYYKASKGKLPIK-----WMAPES--------INFRRFTSASDVWMFGVCMWEILMH 208
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
           GV+P  G   +++   +   + +P +P   PP + +++  C+ YD   RP  T++
Sbjct: 209 GVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 14  QLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXX 73
           Q++   L L+++  YA  L+  +  L SK  +  ++   N +++  D   LGD       
Sbjct: 102 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 161
Query: 74  XXXXXXSSD---LPRRLGTPNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT- 124
                  +    LP +     +MAPE         I+F      +D W F   + E+L  
Sbjct: 162 EDSTYYKASKGKLPIK-----WMAPES--------INFRRFTSASDVWMFGVCMWEILMH 208
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
           GV+P  G   +++   +   + +P +P   PP + +++  C+ YD   RP  T++
Sbjct: 209 GVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 14  QLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXX 73
           Q++   L L+++  YA  L+  +  L SK  +  ++   N +++  D   LGD       
Sbjct: 102 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 161
Query: 74  XXXXXXSSD---LPRRLGTPNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT- 124
                  +    LP +     +MAPE         I+F      +D W F   + E+L  
Sbjct: 162 EDSTXXKASKGKLPIK-----WMAPES--------INFRRFTSASDVWMFGVCMWEILMH 208
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
           GV+P  G   +++   +   + +P +P   PP + +++  C+ YD   RP  T++
Sbjct: 209 GVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 68/166 (40%), Gaps = 15/166 (9%)
Query: 17  GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXX 76
           G  L  + V+ Y  D    +  LHS+G++ L++KP N  L    R  LGD          
Sbjct: 151 GASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA 210
Query: 77  XXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ-PRCGRSVD 135
                    + G P YMAPE  Q    G      D +    +I+E+   ++ P  G    
Sbjct: 211 GAGEV----QEGDPRYMAPELLQ----GSYGTAADVFSLGLTILEVACNMELPHGGEGWQ 262
Query: 136 EIYDAVVRRQEIPP-IPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
           ++     R+  +PP   +GL   + +VL+   E D + R     +L
Sbjct: 263 QL-----RQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALL 303

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 80  SSDLPRRLGTPNYMAPEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
           ++D  + LG  N + P +W  PE  + G  S ++D W +   + E+ + G+QP CG S  
Sbjct: 180 AADYYKLLG--NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ 237
Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
           ++ + ++R +++ P P   P  V  +++ C+      RP   DI
Sbjct: 238 DVVE-MIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 280

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 29  AIDLAQGILQLHSKG--ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 86
           A D+A+G+  LH++   I+  NLK  N ++++     + D             S      
Sbjct: 143 AYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSA--- 199
Query: 87  LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE 146
            GTP +MAPE  + E   P + ++D + F   + E+ T  QP    +  ++  AV  + +
Sbjct: 200 AGTPEWMAPEVLRDE---PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCK 256
Query: 147 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
              IP  L P V  ++ GC+  +   RP    I+ + +
Sbjct: 257 RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 14  QLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXX 73
           Q++   L L+++  YA  L+  +  L SK  +  ++   N +++  D   LGD       
Sbjct: 482 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM 541
Query: 74  XXXXXXSSD---LPRRLGTPNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT- 124
                  +    LP +     +MAPE         I+F      +D W F   + E+L  
Sbjct: 542 EDSTYYKASKGKLPIK-----WMAPES--------INFRRFTSASDVWMFGVCMWEILMH 588
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
           GV+P  G   +++   +   + +P +P   PP + +++  C+ YD   RP  T++
Sbjct: 589 GVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 80  SSDLPRRLGTPNYMAPEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVD 135
           ++D  + LG  N + P +W  PE  + G  S ++D W +   + E+ + G+QP CG S  
Sbjct: 197 AADYYKLLG--NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ 254
Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
           ++ + ++R +++ P P   P  V  +++ C+      RP   DI
Sbjct: 255 DVVE-MIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 297

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 18  GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
           G  S +++  YA ++  G+  +H++ ++  +LKP N +L+E     + D+          
Sbjct: 286 GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 345
Query: 78  XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP-RCGRSVDE 136
             +S     +GT  YMAPE  Q  V    S   D +   C + ++L G  P R  ++ D+
Sbjct: 346 PHAS-----VGTHGYMAPEVLQKGVAYDSS--ADWFSLGCMLFKLLRGHSPFRQHKTKDK 398
Query: 137 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
                +       +P    P + ++L G  + D+  R
Sbjct: 399 HEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRR 435

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 18  GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
           G  S +++  YA ++  G+  +H++ ++  +LKP N +L+E     + D+          
Sbjct: 287 GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 346
Query: 78  XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP-RCGRSVDE 136
             +S     +GT  YMAPE  Q  V    S   D +   C + ++L G  P R  ++ D+
Sbjct: 347 PHAS-----VGTHGYMAPEVLQKGVAYDSS--ADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
Query: 137 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
                +       +P    P + ++L G  + D+  R
Sbjct: 400 HEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRR 436

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 19/153 (12%)
Query: 1   MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M+F +G ++ D ++Q++  +  ++ V    +   Q +  LH++G++  ++K  + +L   
Sbjct: 121 MEFLQGGALTDIVSQVRLNEEQIATVCEAVL---QALAYLHAQGVIHRDIKSDSILLTLD 177
Query: 60  DRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQPEVRGPISFETDSWGFA 116
            R  L D             S D+P+R   +GTP +MAPE      R   + E D W   
Sbjct: 178 GRVKLSDFGFCAQI------SKDVPKRKXLVGTPYWMAPEVIS---RSLYATEVDIWSLG 228
Query: 117 CSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP 149
             +IEM+ G  P      D    A+ R ++ PP
Sbjct: 229 IMVIEMVDGEPPYFS---DSPVQAMKRLRDSPP 258

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 18  GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
           G  S +++  YA ++  G+  +H++ ++  +LKP N +L+E     + D+          
Sbjct: 287 GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 346
Query: 78  XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP-RCGRSVDE 136
             +S     +GT  YMAPE  Q  V    S   D +   C + ++L G  P R  ++ D+
Sbjct: 347 PHAS-----VGTHGYMAPEVLQKGVAYDSS--ADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
Query: 137 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
                +       +P    P + ++L G  + D+  R
Sbjct: 400 HEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRR 436

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Query: 18  GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
           G  S +++  YA ++  G+  +H++ ++  +LKP N +L+E     + D+          
Sbjct: 287 GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 346
Query: 78  XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP-RCGRSVDE 136
             +S     +GT  YMAPE  Q  V    S   D +   C + ++L G  P R  ++ D+
Sbjct: 347 PHAS-----VGTHGYMAPEVLQKGVAYDSS--ADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
Query: 137 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
                +       +P    P + ++L G  + D+  R
Sbjct: 400 HEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRR 436

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 38/174 (21%), Positives = 68/174 (39%), Gaps = 10/174 (5%)
Query: 18  GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
           G ++         D  Q +   H  GI+  ++KP N +++  +   + D           
Sbjct: 111 GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSG 170
Query: 78  XXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI 137
                    +GT  Y++PEQ + +    +   +D +   C + E+LTG  P  G S   +
Sbjct: 171 NSVXQTAAVIGTAQYLSPEQARGD---SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
Query: 138 YDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDLRSR-----PLMTDILRVFK 184
               VR   IPP     GL   ++ V+L     +  +R      +  D++RV  
Sbjct: 228 AYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 14  QLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXX 73
           Q++   L L+++  YA  L+  +  L SK  +  ++   N +++  D   LGD       
Sbjct: 482 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541
Query: 74  XXXXXXSSD---LPRRLGTPNYMAPEQWQPEVRGPISFE-----TDSWGFACSIIEMLT- 124
                  +    LP +     +MAPE         I+F      +D W F   + E+L  
Sbjct: 542 EDSTYYKASKGKLPIK-----WMAPES--------INFRRFTSASDVWMFGVCMWEILMH 588
Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
           GV+P  G   +++   +   + +P +P   PP + +++  C+ YD   RP  T++
Sbjct: 589 GVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 60/156 (38%), Gaps = 8/156 (5%)
Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV-LGDVXXXXXXXXXXXXSSDLPRR 86
           Y   + +G+  LH   I+  ++K  N ++N     + + D             +      
Sbjct: 127 YTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF--- 183
Query: 87  LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP--RCGRSVDEIYDAVVRR 144
            GT  YMAPE      RG      D W   C+IIEM TG  P    G     ++   + +
Sbjct: 184 TGTLQYMAPEIIDKGPRG-YGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK 242
Query: 145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
              P IP  +    +  +L CFE D   R    D+L
Sbjct: 243 VH-PEIPESMSAEAKAFILKCFEPDPDKRACANDLL 277

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 68/185 (36%), Gaps = 21/185 (11%)
Query: 12  MAQLKGGKLSL-------------SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE 58
           M Q+ GG LS                +  Y   + +G+  LH   I+  ++K  N ++N 
Sbjct: 84  MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT 143
Query: 59  ADRAV-LGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFAC 117
               + + D             +       GT  YMAPE      RG      D W   C
Sbjct: 144 YSGVLKISDFGTSKRLAGINPCTETF---TGTLQYMAPEIIDKGPRG-YGKAADIWSLGC 199
Query: 118 SIIEMLTGVQP--RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL 175
           +IIEM TG  P    G     ++   + +   P IP  +    +  +L CFE D   R  
Sbjct: 200 TIIEMATGKPPFYELGEPQAAMFKVGMFKVH-PEIPESMSAEAKAFILKCFEPDPDKRAC 258
Query: 176 MTDIL 180
             D+L
Sbjct: 259 ANDLL 263

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 15/188 (7%)
Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVL---NLKPFNFILN 57
           M+F  G   +R+  L G ++    +  +A+ +A+G+  LH + I+ +   +LK  N ++ 
Sbjct: 85  MEFARGGPLNRV--LSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILIL 142
Query: 58  EADRAVLGDVXXXXXXXXXXXXSSDLPRRL-----GTPNYMAPEQWQPEVRGPISFETDS 112
           +  +   GD+            + +  R       G   +MAPE  +  +    S  +D 
Sbjct: 143 Q--KVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASM---FSKGSDV 197
Query: 113 WGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 172
           W +   + E+LTG  P  G     +   V   +   PIPS  P     ++  C+  D  S
Sbjct: 198 WSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHS 257
Query: 173 RPLMTDIL 180
           RP  T+IL
Sbjct: 258 RPSFTNIL 265

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 49/127 (38%), Gaps = 5/127 (3%)
Query: 6   GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
           GSV D +   KG  L    +     ++ +G+  LH   ++  ++K  N +L E     L 
Sbjct: 112 GSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLV 171
Query: 66  DVXXXXXXXXXXXXSSDLPRRLGTPNYMAPE--QWQPEVRGPISFETDSWGFACSIIEML 123
           D              +     +GTP +MAPE             F++D W    + IEM 
Sbjct: 172 DFGVSAQLDRTVGRRNTF---IGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMA 228
Query: 124 TGVQPRC 130
            G  P C
Sbjct: 229 EGAPPLC 235

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 12/172 (6%)
Query: 18  GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXX 77
           G+L LS +   A  +A G++ L S+  +  +L   N ++       +GD           
Sbjct: 128 GELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVY--- 184
Query: 78  XXSSDLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGRS 133
             S+D  R  G  + M P +W P    +    + E+D W F   + E+ T G QP    S
Sbjct: 185 --STDYYRVGG--HTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS 240
Query: 134 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 185
             E+ + + + + +   P   P  V +V+LGC++ + + R  + +I ++  +
Sbjct: 241 NTEVIECITQGRVLER-PRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHA 291

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 1   MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M+F EG ++ D +   +  +  ++ V    + + Q +  LH++G++  ++K  + +L   
Sbjct: 100 MEFLEGGALTDIVTHTRMNEEQIAAV---CLAVLQALSVLHAQGVIHRDIKSDSILLTHD 156
Query: 60  DRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQPEVRGPISFETDSWGFA 116
            R  L D             S ++PRR   +GTP +MAPE      R P   E D W   
Sbjct: 157 GRVKLSDFGFCAQV------SKEVPRRKXLVGTPYWMAPELIS---RLPYGPEVDIWSLG 207
Query: 117 CSIIEMLTGVQP 128
             +IEM+ G  P
Sbjct: 208 IMVIEMVDGEPP 219

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 1   MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M+F EG ++ D +   +  +  ++ V    + + Q +  LH++G++  ++K  + +L   
Sbjct: 105 MEFLEGGALTDIVTHTRMNEEQIAAV---CLAVLQALSVLHAQGVIHRDIKSDSILLTHD 161
Query: 60  DRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQPEVRGPISFETDSWGFA 116
            R  L D             S ++PRR   +GTP +MAPE      R P   E D W   
Sbjct: 162 GRVKLSDFGFCAQV------SKEVPRRKXLVGTPYWMAPELIS---RLPYGPEVDIWSLG 212
Query: 117 CSIIEMLTGVQP 128
             +IEM+ G  P
Sbjct: 213 IMVIEMVDGEPP 224

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           M+F EG  G     +   +++   +    + + Q +  LH++G++  ++K  + +L    
Sbjct: 107 MEFLEG--GALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG 164
Query: 61  RAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQPEVRGPISFETDSWGFAC 117
           R  L D             S ++PRR   +GTP +MAPE      R P   E D W    
Sbjct: 165 RVKLSDFGFCAQV------SKEVPRRKXLVGTPYWMAPELIS---RLPYGPEVDIWSLGI 215
Query: 118 SIIEMLTGVQP 128
            +IEM+ G  P
Sbjct: 216 MVIEMVDGEPP 226

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 1   MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M+F EG ++ D +   +  +  ++ V    + + Q +  LH++G++  ++K  + +L   
Sbjct: 96  MEFLEGGALTDIVTHTRMNEEQIAAV---CLAVLQALSVLHAQGVIHRDIKSDSILLTHD 152
Query: 60  DRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQPEVRGPISFETDSWGFA 116
            R  L D             S ++PRR   +GTP +MAPE      R P   E D W   
Sbjct: 153 GRVKLSDFGFCAQV------SKEVPRRKXLVGTPYWMAPELIS---RLPYGPEVDIWSLG 203
Query: 117 CSIIEMLTGVQP 128
             +IEM+ G  P
Sbjct: 204 IMVIEMVDGEPP 215

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           M+F EG  G     +   +++   +    + + Q +  LH++G++  ++K  + +L    
Sbjct: 227 MEFLEG--GALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG 284
Query: 61  RAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQPEVRGPISFETDSWGFAC 117
           R  L D             S ++PRR   +GTP +MAPE      R P   E D W    
Sbjct: 285 RVKLSDFGFCAQV------SKEVPRRKXLVGTPYWMAPELIS---RLPYGPEVDIWSLGI 335
Query: 118 SIIEMLTGVQP 128
            +IEM+ G  P
Sbjct: 336 MVIEMVDGEPP 346

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 1   MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M+F EG ++ D +   +  +  ++ V    + + Q +  LH++G++  ++K  + +L   
Sbjct: 150 MEFLEGGALTDIVTHTRMNEEQIAAV---CLAVLQALSVLHAQGVIHRDIKSDSILLTHD 206
Query: 60  DRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQPEVRGPISFETDSWGFA 116
            R  L D             S ++PRR   +GTP +MAPE      R P   E D W   
Sbjct: 207 GRVKLSDFGFCAQV------SKEVPRRKXLVGTPYWMAPELIS---RLPYGPEVDIWSLG 257
Query: 117 CSIIEMLTGVQP 128
             +IEM+ G  P
Sbjct: 258 IMVIEMVDGEPP 269

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 7/121 (5%)
Query: 9   GDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV 67
           GD M  + +  KL   +   Y+ +++  +  LH +GI+  +LK  N +L+      L D 
Sbjct: 138 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDY 197
Query: 68  XXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ 127
                       +S      GTPNY+APE  + E  G   F  D W     + EM+ G  
Sbjct: 198 GMCKEGLRPGDTTSTF---CGTPNYIAPEILRGEDYG---FSVDWWALGVLMFEMMAGRS 251
Query: 128 P 128
           P
Sbjct: 252 P 252

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 8/163 (4%)
Query: 1   MKFYEGSVGDRMAQLKGGKLSL-SNVFRYAI-DLAQGILQLHSKGILVLNLKPFNFILNE 58
           M +Y G  GD +  L   +  L  ++ R+ I ++   I  +H    +  ++KP N +L+ 
Sbjct: 153 MDYYVG--GDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDV 210
Query: 59  ADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISF--ETDSWGFA 116
                L D              S +   +GTP+Y++PE  Q    G   +  E D W   
Sbjct: 211 NGHIRLADFGSCLKMNDDGTVQSSVA--VGTPDYISPEILQAMEDGMGKYGPECDWWSLG 268
Query: 117 CSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE 159
             + EML G  P    S+ E Y  ++  +E    PS +    E
Sbjct: 269 VCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSE 311

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 7/121 (5%)
Query: 9   GDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV 67
           GD M  + +  KL   +   Y+ +++  +  LH +GI+  +LK  N +L+      L D 
Sbjct: 95  GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDY 154
Query: 68  XXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ 127
                       +S      GTPNY+APE  + E  G   F  D W     + EM+ G  
Sbjct: 155 GMCKEGLRPGDTTSXF---CGTPNYIAPEILRGEDYG---FSVDWWALGVLMFEMMAGRS 208
Query: 128 P 128
           P
Sbjct: 209 P 209

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 7/121 (5%)
Query: 9   GDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV 67
           GD M  + +  KL   +   Y+ +++  +  LH +GI+  +LK  N +L+      L D 
Sbjct: 106 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDY 165
Query: 68  XXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ 127
                       +S      GTPNY+APE  + E  G   F  D W     + EM+ G  
Sbjct: 166 GMCKEGLRPGDTTSXF---CGTPNYIAPEILRGEDYG---FSVDWWALGVLMFEMMAGRS 219
Query: 128 P 128
           P
Sbjct: 220 P 220

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 7/121 (5%)
Query: 9   GDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV 67
           GD M  + +  KL   +   Y+ +++  +  LH +GI+  +LK  N +L+      L D 
Sbjct: 91  GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDY 150
Query: 68  XXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ 127
                       +S      GTPNY+APE  + E  G   F  D W     + EM+ G  
Sbjct: 151 GMCKEGLRPGDTTSXF---CGTPNYIAPEILRGEDYG---FSVDWWALGVLMFEMMAGRS 204
Query: 128 P 128
           P
Sbjct: 205 P 205

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 1   MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M+F EG ++ D +   +  +  ++ V    + + + +  LH++G++  ++K  + +L   
Sbjct: 121 MEFLEGGALTDIVTHTRMNEEQIATV---CLSVLRALSYLHNQGVIHRDIKSDSILLTSD 177
Query: 60  DRAVLGDVXXXXXXXXXXXXSSDLPRR---LGTPNYMAPEQWQPEVRGPISFETDSWGFA 116
            R  L D             S ++P+R   +GTP +MAPE      R P   E D W   
Sbjct: 178 GRIKLSDFGFCAQV------SKEVPKRKXLVGTPYWMAPEVIS---RLPYGTEVDIWSLG 228
Query: 117 CSIIEMLTGVQP 128
             +IEM+ G  P
Sbjct: 229 IMVIEMIDGEPP 240

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 8/163 (4%)
Query: 1   MKFYEGSVGDRMAQLKGGKLSL-SNVFRYAI-DLAQGILQLHSKGILVLNLKPFNFILNE 58
           M +Y G  GD +  L   +  L  ++ R+ I ++   I  +H    +  ++KP N +L+ 
Sbjct: 169 MDYYVG--GDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDV 226
Query: 59  ADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISF--ETDSWGFA 116
                L D              S +   +GTP+Y++PE  Q    G   +  E D W   
Sbjct: 227 NGHIRLADFGSCLKMNDDGTVQSSVA--VGTPDYISPEILQAMEDGMGKYGPECDWWSLG 284
Query: 117 CSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE 159
             + EML G  P    S+ E Y  ++  +E    PS +    E
Sbjct: 285 VCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSE 327

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
Query: 6   GSVGDRMAQLKGGK-LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
           GS+ DR++ L G   LS     + A   A GI  LH    +  ++K  N +L+EA  A +
Sbjct: 115 GSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKI 174
Query: 65  GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
            D                  R +GT  YMAPE     +RG I+ ++D + F   ++E++T
Sbjct: 175 SDFGLARASEKFAQTVM-XSRIVGTTAYMAPEA----LRGEITPKSDIYSFGVVLLEIIT 229
Query: 125 GV 126
           G+
Sbjct: 230 GL 231

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 68/171 (39%), Gaps = 13/171 (7%)
Query: 1   MKFYEGSVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE 58
           M++Y G  GD +  L   G ++       Y  ++   I  +H  G +  ++KP N +L+ 
Sbjct: 140 MEYYVG--GDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDR 197
Query: 59  ADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISF----ETDSWG 114
                L D              S +   +GTP+Y++PE  Q    GP +     E D W 
Sbjct: 198 CGHIRLADFGSCLKLRADGTVRSLVA--VGTPDYLSPEILQAVGGGPGTGSYGPECDWWA 255
Query: 115 FACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE---IPPIPSGLPPAVENVL 162
                 EM  G  P    S  E Y  +V  +E   +P +  G+P    + +
Sbjct: 256 LGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFI 306

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Query: 29  AIDLAQGILQLHSKG--ILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRR 86
           A D+A+G+  LH++   I+  +LK  N ++++     + D             S      
Sbjct: 143 AYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSK---XA 199
Query: 87  LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE 146
            GTP +MAPE  + E   P + ++D + F   + E+ T  QP    +  ++  AV  + +
Sbjct: 200 AGTPEWMAPEVLRDE---PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCK 256
Query: 147 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
              IP  L P V  ++ GC+  +   RP    I+ + +
Sbjct: 257 RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
Query: 6   GSVGDRMAQLKGGK-LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
           GS+ DR++ L G   LS     + A   A GI  LH    +  ++K  N +L+EA  A +
Sbjct: 115 GSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKI 174
Query: 65  GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
            D                  R +GT  YMAPE     +RG I+ ++D + F   ++E++T
Sbjct: 175 SDFGLARASEKFAQTVM-XXRIVGTTAYMAPEA----LRGEITPKSDIYSFGVVLLEIIT 229
Query: 125 GV 126
           G+
Sbjct: 230 GL 231

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 6/122 (4%)
Query: 6   GSVGDRMAQLKGGK-LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
           GS+ DR++ L G   LS     + A   A GI  LH    +  ++K  N +L+EA  A +
Sbjct: 109 GSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKI 168
Query: 65  GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
            D                  R +GT  YMAPE     +RG I+ ++D + F   ++E++T
Sbjct: 169 SDFGLARASEKFAQXVM-XXRIVGTTAYMAPEA----LRGEITPKSDIYSFGVVLLEIIT 223
Query: 125 GV 126
           G+
Sbjct: 224 GL 225

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 15/159 (9%)
Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEA 59
           M+  +G   D++ + K G++    + + +I + +G+  L  K  I+  ++KP N ++N  
Sbjct: 86  MEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR 144
Query: 60  DRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
               L D                    +GT +YM+PE+ Q       S ++D W    S+
Sbjct: 145 GEIKLCDFGVSGQLIDEMAN-----EFVGTRSYMSPERLQGT---HYSVQSDIWSMGLSL 196
Query: 120 IEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV 158
           +EM  G  PR   ++ E+ D +V   E PP    LP AV
Sbjct: 197 VEMAVGRYPRPPMAIFELLDYIV--NEPPP---KLPSAV 230

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 4/135 (2%)
Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
           Y  ++   I  +H    +  ++KP N +++      L D              S +   +
Sbjct: 180 YLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA--V 237
Query: 88  GTPNYMAPEQWQPEVRGPISF--ETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ 145
           GTP+Y++PE  Q    G   +  E D W     + EML G  P    S+ E Y  ++  +
Sbjct: 238 GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK 297
Query: 146 EIPPIPSGLPPAVEN 160
           E    P+ +    EN
Sbjct: 298 ERFQFPTQVTDVSEN 312

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 6/111 (5%)
Query: 32  LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRLGTPN 91
           +  G+L LHS GIL  +L   N +L       + D                L    GTPN
Sbjct: 121 IITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTL---CGTPN 177
Query: 92  YMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV 142
           Y++PE       G    E+D W   C    +L G  P    +V    + VV
Sbjct: 178 YISPEIATRSAHG---LESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV 225

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 26  FRYAIDLAQGI--LQLHSKGILVLNLKPFNFILNEADR--AVLGDVXXXXXXXXXXXXSS 81
            R  +D+A GI  +Q  +  I+  +L+  N  L   D    V   V             S
Sbjct: 125 LRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVS 184
Query: 82  DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI-YDA 140
            L   LG   +MAPE    E     + + D++ FA  +  +LTG  P    S  +I +  
Sbjct: 185 GL---LGNFQWMAPETIGAEEES-YTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN 240
Query: 141 VVRRQEI-PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
           ++R + + P IP   PP + NV+  C+  D + RP  + I++
Sbjct: 241 MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 26  FRYAIDLAQGI--LQLHSKGILVLNLKPFNFILNEADR--AVLGDVXXXXXXXXXXXXSS 81
            R  +D+A GI  +Q  +  I+  +L+  N  L   D    V   V             S
Sbjct: 125 LRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVS 184
Query: 82  DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI-YDA 140
            L   LG   +MAPE    E     + + D++ FA  +  +LTG  P    S  +I +  
Sbjct: 185 GL---LGNFQWMAPETIGAEEES-YTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN 240
Query: 141 VVRRQEI-PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
           ++R + + P IP   PP + NV+  C+  D + RP  + I++
Sbjct: 241 MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 26  FRYAIDLAQGI--LQLHSKGILVLNLKPFNFILNEADR--AVLGDVXXXXXXXXXXXXSS 81
            R  +D+A GI  +Q  +  I+  +L+  N  L   D    V   V             S
Sbjct: 125 LRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVS 184
Query: 82  DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI-YDA 140
            L   LG   +MAPE    E     + + D++ FA  +  +LTG  P    S  +I +  
Sbjct: 185 GL---LGNFQWMAPETIGAEEES-YTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN 240
Query: 141 VVRRQEI-PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
           ++R + + P IP   PP + NV+  C+  D + RP  + I++
Sbjct: 241 MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
Query: 6   GSVGDRMAQLKGGK-LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
           GS+ DR++ L G   LS     + A   A GI  LH    +  ++K  N +L+EA  A +
Sbjct: 106 GSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKI 165
Query: 65  GDVXXXXXXXXXXXXSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT 124
            D                  R +GT  Y APE     +RG I+ ++D + F   ++E++T
Sbjct: 166 SDFGLARASEKFAQXVX-XSRIVGTTAYXAPEA----LRGEITPKSDIYSFGVVLLEIIT 220
Query: 125 GV 126
           G+
Sbjct: 221 GL 222

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/146 (21%), Positives = 61/146 (41%), Gaps = 8/146 (5%)
Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
           Y  ++   +  LHS+ ++  ++K  N +L++     + D              + +    
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKTFC 166
Query: 88  GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
           GTP Y+APE  +    G      D WG    + EM+ G  P   +  + +++ ++   E 
Sbjct: 167 GTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEE 221
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSR 173
              P  L P  +++L G  + D + R
Sbjct: 222 IRFPRTLSPEAKSLLAGLLKKDPKQR 247

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/146 (21%), Positives = 61/146 (41%), Gaps = 8/146 (5%)
Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVXXXXXXXXXXXXSSDLPRRL 87
           Y  ++   +  LHS+ ++  ++K  N +L++     + D              + +    
Sbjct: 113 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKTFC 169
Query: 88  GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI 147
           GTP Y+APE  +    G      D WG    + EM+ G  P   +  + +++ ++   E 
Sbjct: 170 GTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEE 224
Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSR 173
              P  L P  +++L G  + D + R
Sbjct: 225 IRFPRTLSPEAKSLLAGLLKKDPKQR 250

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	503
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-23
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-21
2a19_B	284	Interferon-induced, double-stranded RNA-activated	5e-21
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	6e-21
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	9e-21
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-20
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	4e-19
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	5e-19
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	6e-19
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	6e-19
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-18
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-18
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-18
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	3e-18
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	3e-18
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	4e-18
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	8e-18
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	2e-17
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-16
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	4e-16
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	7e-16
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	8e-16
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	1e-15
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-15
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	3e-15
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	7e-15
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	4e-14
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	5e-14
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	1e-13
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	6e-13
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	2e-12
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-12
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	4e-12
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	4e-12
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	8e-12
3q4u_A	301	Activin receptor type-1; structural genomics conso	9e-12
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-11
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	1e-11
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	1e-11
3ork_A	311	Serine/threonine protein kinase; structural genomi	2e-11
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-11
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-11
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	3e-11
3soc_A	322	Activin receptor type-2A; structural genomics cons	5e-11
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	5e-11
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	6e-11
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-10
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	2e-10
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	3e-10
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	4e-10
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	7e-10
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	7e-10
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	8e-10
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	1e-09
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	1e-09
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-09
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-09
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	2e-09
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	2e-09
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-09
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	3e-09
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	4e-09
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	5e-09
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	5e-09
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	5e-09
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	5e-09
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	6e-09
3bhy_A	283	Death-associated protein kinase 3; death associate	6e-09
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	6e-09
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	6e-09
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	8e-09
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	9e-09
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	9e-09
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	9e-09
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	1e-08
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	1e-08
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	1e-08
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-08
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	2e-08
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	3e-07
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	5e-07
3uqc_A	286	Probable conserved transmembrane protein; structur	6e-07
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	1e-06
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	2e-06
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	5e-06
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	5e-06
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	6e-06
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	7e-06
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	7e-06
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	7e-06
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	8e-06
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	1e-05
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	2e-05
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-05
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	2e-05
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	2e-05
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	3e-05
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	3e-05
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	4e-05
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	4e-05
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	4e-05
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	5e-05
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	5e-05
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	6e-05
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	8e-05
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-04
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-04
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-04
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	1e-04
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	1e-04
2dyl_A	318	Dual specificity mitogen-activated protein kinase	1e-04
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-04
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	2e-04
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	3e-04
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	4e-04
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	5e-04
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	6e-04
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	6e-04
4aoj_A	329	High affinity nerve growth factor receptor; transf	7e-04
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	9e-04

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  100 bits (250), Expect = 2e-23
 Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 10/183 (5%)

Query: 1   MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M + E G +  R+   KG       +  + + +   +  +H + IL  ++K  N  L + 
Sbjct: 102 MDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKD 161

Query: 60  DRAVLGDVGIPHLLLGIPLPSSDLPR-RLGTPNYMAPEQWQPEVRGPISFETDSWGFACS 118
               LGD GI  +L      + +L R  +GTP Y++PE  + +   P + ++D W   C 
Sbjct: 162 GTVQLGDFGIARVLNS----TVELARACIGTPYYLSPEICENK---PYNNKSDIWALGCV 214

Query: 119 IIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTD 178
           + E+ T        S+  +   ++     PP+       + +++   F+ + R RP +  
Sbjct: 215 LYELCTLKHAFEAGSMKNLVLKIISGS-FPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNS 273

Query: 179 ILR 181
           IL 
Sbjct: 274 ILE 276

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 93.5 bits (233), Expect = 2e-21
 Identities = 42/178 (23%), Positives = 76/178 (42%), Gaps = 9/178 (5%)

Query: 14  QLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL 73
                K  +  +   A   A+G+  LH+K I+  +LK  N  L+E +   +GD G+    
Sbjct: 111 HASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEK 170

Query: 74  LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII--EMLTGVQPRCG 131
                 S    +  G+  +MAPE  + +   P SF++D + F   I+  E++TG  P   
Sbjct: 171 SRWSG-SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG--IVLYELMTGQLPYSN 227

Query: 132 -RSVDEIYDAVV---RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 185
             + D+I + V       ++  + S  P  ++ ++  C +     RP    IL   + 
Sbjct: 228 INNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 285

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 92.0 bits (229), Expect = 5e-21
 Identities = 36/176 (20%), Positives = 63/176 (35%), Gaps = 13/176 (7%)

Query: 6   GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
           G++   + + +G KL           + +G+  +HSK ++  +LKP N  L +  +  +G
Sbjct: 105 GTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIG 164

Query: 66  DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
           D G+   L           R  GT  YM+PEQ           E D +     + E+L  
Sbjct: 165 DFGLVTSL----KNDGKRTRSKGTLRYMSPEQIS---SQDYGKEVDLYALGLILAELLHV 217

Query: 126 VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
                     + +  +        I        + +L          RP  ++ILR
Sbjct: 218 CDT--AFETSKFFTDLRD----GIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILR 267

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 91.5 bits (228), Expect = 6e-21
 Identities = 44/187 (23%), Positives = 78/187 (41%), Gaps = 14/187 (7%)

Query: 6   GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLN--LKPFNFILNEADRAV 63
           GS+ + + +     +  S   ++A+D+A+G+  LH+   L+    L   + +++E   A 
Sbjct: 94  GSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTAR 153

Query: 64  LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII--E 121
           +    +          S   P R+  P ++APE  Q +         D W FA  ++  E
Sbjct: 154 ISMADVKF--------SFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFA--VLLWE 203

Query: 122 MLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
           ++T   P    S  EI   V      P IP G+ P V  ++  C   D   RP    I+ 
Sbjct: 204 LVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVP 263

Query: 182 VFKSSQN 188
           + +  Q+
Sbjct: 264 ILEKMQD 270

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 92.0 bits (229), Expect = 9e-21
 Identities = 45/183 (24%), Positives = 74/183 (40%), Gaps = 16/183 (8%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
            +    S+        G  L  + V+ Y  D    +  LHS+G++ L++KP N  L    
Sbjct: 136 TELCGPSLQQHCEA-WGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRG 194

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPR-RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
           R  LGD G     L + L ++     + G P YMAPE  Q    G      D +    +I
Sbjct: 195 RCKLGDFG-----LLVELGTAGAGEVQEGDPRYMAPELLQ----GSYGTAADVFSLGLTI 245

Query: 120 IEMLTGVQ-PRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTD 178
           +E+   ++ P  G    ++    +     P   +GL   + +VL+   E D + R     
Sbjct: 246 LEVACNMELPHGGEGWQQLRQGYLP----PEFTAGLSSELRSVLVMMLEPDPKLRATAEA 301

Query: 179 ILR 181
           +L 
Sbjct: 302 LLA 304

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 91.7 bits (228), Expect = 1e-20
 Identities = 43/191 (22%), Positives = 77/191 (40%), Gaps = 10/191 (5%)

Query: 1   MKFYE-GSVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN 57
           + F++ G++ + + +LK  G  L+   +    + + +G+  +H+KG    +LKP N +L 
Sbjct: 109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLG 168

Query: 58  EADRAVLGDVGIPHLLLGIPLPSS------DLPRRLGTPNYMAPEQWQPEVRGPISFETD 111
           +  + VL D+G  +        S       D   +  T +Y APE +  +    I   TD
Sbjct: 169 DEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTD 228

Query: 112 SWGFACSIIEMLTGVQP-RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDL 170
            W   C +  M+ G  P        +     V+ Q   P       A+  +L      D 
Sbjct: 229 VWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDP 288

Query: 171 RSRPLMTDILR 181
             RP +  +L 
Sbjct: 289 HQRPHIPLLLS 299

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 88.6 bits (219), Expect = 4e-19
 Identities = 24/188 (12%), Positives = 52/188 (27%), Gaps = 15/188 (7%)

Query: 1   MKFYEGSVGDRMAQL-----KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI 55
               + ++      L         L      +  + + + +  LH  G++   L+P + +
Sbjct: 184 YPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIV 243

Query: 56  LNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQ--WQPEVRGPISFETDSW 113
           L++     L             +           P   A     +       ++F  D+W
Sbjct: 244 LDQRGGVFLTGFEHLVRDGASAVSPIGRG--FAPPETTAERMLPFGQHHPTLMTFAFDTW 301

Query: 114 GFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
               +I  +     P    +     + + R          +P  V  +L G   Y    R
Sbjct: 302 TLGLAIYWIWCADLPNTDDAALGGSEWIFRS------CKNIPQPVRALLEGFLRYPKEDR 355

Query: 174 PLMTDILR 181
            L    + 
Sbjct: 356 LLPLQAME 363

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 86.2 bits (214), Expect = 5e-19
 Identities = 41/192 (21%), Positives = 68/192 (35%), Gaps = 21/192 (10%)

Query: 1   MKFYEGSVGD-----RMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLN-----LK 50
           M++ EG  GD          +   L    V R    L   + + H +           LK
Sbjct: 86  MEYCEG--GDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143

Query: 51  PFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPR-RLGTPNYMAPEQWQPEVRGPISFE 109
           P N  L+      LGD G+  +L       +   +  +GTP YM+PEQ         + +
Sbjct: 144 PANVFLDGKQNVKLGDFGLARILN----HDTSFAKTFVGTPYYMSPEQMNRM---SYNEK 196

Query: 110 TDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYD 169
           +D W   C + E+   + P    S  E+   +   +    IP      +  ++       
Sbjct: 197 SDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK-FRRIPYRYSDELNEIITRMLNLK 255

Query: 170 LRSRPLMTDILR 181
              RP + +IL 
Sbjct: 256 DYHRPSVEEILE 267

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 86.6 bits (215), Expect = 6e-19
 Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 12/179 (6%)

Query: 19  KLSLSNVFRYAIDLAQGILQLHSKGILVL--NLKPFNFILNEADRAVLGDVGIPHLLLGI 76
           +L        A D+A+G+  LH++   ++  NLK  N ++++     + D G+  L    
Sbjct: 133 QLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST 192

Query: 77  PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII--EMLTGVQPRCGRSV 134
            L S       GTP +MAPE  + E   P + ++D + F   +I  E+ T  QP    + 
Sbjct: 193 FLSSKSAA---GTPEWMAPEVLRDE---PSNEKSDVYSFG--VILWELATLQQPWGNLNP 244

Query: 135 DEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD 193
            ++  AV  + +   IP  L P V  ++ GC+  +   RP    I+ + +    S    
Sbjct: 245 AQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP 303

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 86.6 bits (215), Expect = 6e-19
 Identities = 35/178 (19%), Positives = 71/178 (39%), Gaps = 9/178 (5%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI--PHLL 73
               L ++   + A ++ +G+  LH+KGIL  +LK  N   +   + V+ D G+     +
Sbjct: 123 AKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDN-GKVVITDFGLFSISGV 181

Query: 74  LGIPLPSSDLPRRLGTPNYMAPE------QWQPEVRGPISFETDSWGFACSIIEMLTGVQ 127
           L        L  + G   ++APE          E + P S  +D +       E+     
Sbjct: 182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREW 241

Query: 128 PRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 185
           P   +  + I   +    +      G+   + ++LL C+ ++   RP  T ++ + + 
Sbjct: 242 PFKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEK 299

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 85.1 bits (211), Expect = 2e-18
 Identities = 40/185 (21%), Positives = 76/185 (41%), Gaps = 14/185 (7%)

Query: 6   GSVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV 63
           G +   +   K     +    V++Y + L   +  +HS+ ++  ++KP N  +       
Sbjct: 117 GDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVK 176

Query: 64  LGDVGIPHLLLGIPLPSSDLPR-RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEM 122
           LGD+G+           +      +GTP YM+PE+         +F++D W   C + EM
Sbjct: 177 LGDLGLGRFFSS----KTTAAHSLVGTPYYMSPERIHEN---GYNFKSDIWSLGCLLYEM 229

Query: 123 LTGVQPRCG--RSVDEIYDAVVRRQEIPPIPSG-LPPAVENVLLGCFEYDLRSRPLMTDI 179
                P  G   ++  +   +  + + PP+PS      +  ++  C   D   RP +T +
Sbjct: 230 AALQSPFYGDKMNLYSLCKKIE-QCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYV 288

Query: 180 LRVFK 184
             V K
Sbjct: 289 YDVAK 293

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 84.7 bits (210), Expect = 2e-18
 Identities = 37/186 (19%), Positives = 65/186 (34%), Gaps = 16/186 (8%)

Query: 6   GSVGDRMAQLKGGK-LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL 64
            ++ D M      +    S      + +A+ +  LHSKG++  +LKP N      D   +
Sbjct: 100 ENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKV 159

Query: 65  GDVGIPHLL---------LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGF 115
           GD G+   +         L      +    ++GT  YM+PEQ         S + D +  
Sbjct: 160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIH---GNSYSHKVDIFSL 216

Query: 116 ACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPL 175
              + E+L                  VR  + PP+ +   P    ++          RP 
Sbjct: 217 GLILFELLYP--FSTQMERVRTLTD-VRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPE 273

Query: 176 MTDILR 181
             +I+ 
Sbjct: 274 AINIIE 279

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 85.1 bits (211), Expect = 3e-18
 Identities = 38/193 (19%), Positives = 80/193 (41%), Gaps = 19/193 (9%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           M+     +   +   K   +       Y  ++ + +  +H  GI+  +LKP NF++ +  
Sbjct: 88  MECGNIDLNSWLK--KKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-G 144

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRR--LGTPNYMAPE--------QWQPEVRGPISFET 110
              L D GI +    +   ++ + +   +GT NYM PE        +   + +  IS ++
Sbjct: 145 MLKLIDFGIANQ---MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 201

Query: 111 DSWGFACSIIEMLTGVQP--RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 168
           D W   C +  M  G  P  +    + +++ A++        P      +++VL  C + 
Sbjct: 202 DVWSLGCILYYMTYGKTPFQQIINQISKLH-AIIDPNHEIEFPDIPEKDLQDVLKCCLKR 260

Query: 169 DLRSRPLMTDILR 181
           D + R  + ++L 
Sbjct: 261 DPKQRISIPELLA 273

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 85.3 bits (211), Expect = 3e-18
 Identities = 36/180 (20%), Positives = 71/180 (39%), Gaps = 21/180 (11%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG----IPH 71
           K   +       Y  ++ + +  +H  GI+  +LKP NF++ +     L D G    +  
Sbjct: 148 KKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQP 206

Query: 72  LLLGIPLPSSDLPRRLGTPNYMAPE--------QWQPEVRGPISFETDSWGFACSIIEML 123
               +   S      +G  NYM PE        +   + +  IS ++D W   C +  M 
Sbjct: 207 DTTSVVKDSQ-----VGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 261

Query: 124 TGVQP--RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
            G  P  +    + +++ A++        P      +++VL  C + D + R  + ++L 
Sbjct: 262 YGKTPFQQIINQISKLH-AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 320

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 83.9 bits (208), Expect = 4e-18
 Identities = 37/178 (20%), Positives = 76/178 (42%), Gaps = 17/178 (9%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG 75
           K   +       Y  ++ + +  +H  GI+  +LKP NF++ +     L D GI +    
Sbjct: 120 KKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQ--- 175

Query: 76  IPLPSSDLPRR--LGTPNYMAPE--------QWQPEVRGPISFETDSWGFACSIIEMLTG 125
           +   ++ + +   +GT NYM PE        +   + +  IS ++D W   C +  M  G
Sbjct: 176 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG 235

Query: 126 VQP--RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
             P  +    + +++ A++        P      +++VL  C + D + R  + ++L 
Sbjct: 236 KTPFQQIINQISKLH-AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 292

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 84.3 bits (208), Expect = 8e-18
 Identities = 25/194 (12%), Positives = 53/194 (27%), Gaps = 26/194 (13%)

Query: 1   MKFYEGSVGDRMAQL-----KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI 55
               + ++      L         L      +  + + + +  LH  G++   L+P + +
Sbjct: 179 YPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIV 238

Query: 56  LNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV--------RGPIS 107
           L++     L             +          +  +  PE              R  ++
Sbjct: 239 LDQRGGVFLTG-------FEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMT 291

Query: 108 FETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFE 167
           F  D+W     I  +     P    +     + + R          +P  V  +L G   
Sbjct: 292 FSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFRS------CKNIPQPVRALLEGFLR 345

Query: 168 YDLRSRPLMTDILR 181
           Y    R L    + 
Sbjct: 346 YPKEDRLLPLQAME 359

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 82.0 bits (203), Expect = 2e-17
 Identities = 32/191 (16%), Positives = 62/191 (32%), Gaps = 22/191 (11%)

Query: 6   GSVGDRMAQLKGGKLSLS--NVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV 63
           GS+ D +++            +    + + +G+  +HS  ++ +++KP N  ++      
Sbjct: 96  GSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPN 155

Query: 64  LGDVGIPHLL------------LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETD 111
                                 LG     S      G   ++A E  Q         + D
Sbjct: 156 AASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENY--THLPKAD 213

Query: 112 SWGFACSIIEMLTGVQ-PRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDL 170
            +  A +++        PR G    EI     R+  +P IP  L      +L      D 
Sbjct: 214 IFALALTVVCAAGAEPLPRNGDQWHEI-----RQGRLPRIPQVLSQEFTELLKVMIHPDP 268

Query: 171 RSRPLMTDILR 181
             RP    +++
Sbjct: 269 ERRPSAMALVK 279

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 78.5 bits (194), Expect = 2e-16
 Identities = 42/181 (23%), Positives = 72/181 (39%), Gaps = 20/181 (11%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVL--NLKPFNFILNEADRAV-----LGDVG 68
           K   +  S   R  +D+A GI  + ++   ++  +L+  N  L   D        + D G
Sbjct: 115 KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174

Query: 69  IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII--EMLTGV 126
           +             +   LG   +MAPE    E     + + D++ FA  +I   +LTG 
Sbjct: 175 LSQQS------VHSVSGLLGNFQWMAPETIGAE-EESYTEKADTYSFA--MILYTILTGE 225

Query: 127 QPRCGRSVDEI--YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
            P    S  +I   + +      P IP   PP + NV+  C+  D + RP  + I++   
Sbjct: 226 GPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285

Query: 185 S 185
            
Sbjct: 286 E 286

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 78.9 bits (194), Expect = 4e-16
 Identities = 30/193 (15%), Positives = 55/193 (28%), Gaps = 19/193 (9%)

Query: 1   MKFYEGSVGDRMAQLK-----GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFI 55
           M      +    + L       G   +  +      L +    L SKG++  +  P N  
Sbjct: 167 MPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLF 226

Query: 56  LNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGF 115
           +    R +LGDV                      P   AP ++        +   ++W  
Sbjct: 227 IMPDGRLMLGDVSALW-------KVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQL 279

Query: 116 ACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP-------PIPSGLPPAVENVLLGCFEY 168
             SI  +     P    +             +P          + LP  V+ ++     +
Sbjct: 280 GLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNF 339

Query: 169 DLRSRPLMTDILR 181
           D R R L  + + 
Sbjct: 340 DRRRRLLPLEAME 352

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 77.4 bits (191), Expect = 7e-16
 Identities = 37/179 (20%), Positives = 73/179 (40%), Gaps = 18/179 (10%)

Query: 19  KLSLSNVFRYAIDLAQGILQLHS---KGILVLNLKPFNFILNEADRAV-LGDVGIPHLLL 74
             + ++   + +  +QG+  LHS   K ++  +LKP N +L      + + D G    + 
Sbjct: 98  YYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI- 156

Query: 75  GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII--EMLTGVQPRCGR 132
                 + +    G+  +MAPE ++       S + D + +   II  E++T  +P    
Sbjct: 157 -----QTHMTNNKGSAAWMAPEVFEGS---NYSEKCDVFSWG--IILWEVITRRKPFDEI 206

Query: 133 SVDEI-YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSV 190
                     V     PP+   LP  +E+++  C+  D   RP M +I+++        
Sbjct: 207 GGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 77.5 bits (191), Expect = 8e-16
 Identities = 32/193 (16%), Positives = 67/193 (34%), Gaps = 16/193 (8%)

Query: 1   MKFYEGSVGDRMAQLK-GGKLSLSNVFRYAIDLAQGILQLHSKGILVLN--LKPFNFILN 57
            +  +G + + + +++  G LS   V +      + +  +H +   +++  LK  N +L+
Sbjct: 113 TELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLS 172

Query: 58  EADRAVLGDVGIPHLLLGIPLPSS---------DLPRRLGTPNYMAPEQWQPEVRGPISF 108
                 L D G    +   P  S          +   R  TP Y  PE        PI  
Sbjct: 173 NQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGE 232

Query: 109 ETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 168
           + D W   C +  +     P    +   I +       IPP  +       +++    + 
Sbjct: 233 KQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKYS---IPPHDT-QYTVFHSLIRAMLQV 288

Query: 169 DLRSRPLMTDILR 181
           +   R  + +++ 
Sbjct: 289 NPEERLSIAEVVH 301

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 76.2 bits (188), Expect = 1e-15
 Identities = 48/174 (27%), Positives = 70/174 (40%), Gaps = 11/174 (6%)

Query: 6   GSVGDRMAQLKGGKLSLS-NVFR-YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV 63
           GS+   + + K G L  +      Y   + +G+  LH   I+  ++K  N ++N     +
Sbjct: 104 GSLSA-LLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVL 162

Query: 64  -LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEM 122
            + D G    L GI   +       GT  YMAPE      RG      D W   C+IIEM
Sbjct: 163 KISDFGTSKRLAGINPCTETF---TGTLQYMAPEIIDKGPRG-YGKAADIWSLGCTIIEM 218

Query: 123 LTGVQP--RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
            TG  P    G     ++  V   +  P IP  +    +  +L CFE D   R 
Sbjct: 219 ATGKPPFYELGEPQAAMF-KVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRA 271

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 75.8 bits (187), Expect = 2e-15
 Identities = 42/184 (22%), Positives = 73/184 (39%), Gaps = 23/184 (12%)

Query: 15  LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVL---NLKPFNFILNEADRAV-------- 63
           L G ++    +  +A+ +A+G+  LH + I+ +   +LK  N ++ +             
Sbjct: 97  LSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILK 156

Query: 64  LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII--E 121
           + D G     L      +      G   +MAPE  +       S  +D W +   ++  E
Sbjct: 157 ITDFG-----LAREWHRTTKMSAAGAYAWMAPEVIRAS---MFSKGSDVWSYG--VLLWE 206

Query: 122 MLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
           +LTG  P  G     +   V   +   PIPS  P     ++  C+  D  SRP  T+IL 
Sbjct: 207 LLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILD 266

Query: 182 VFKS 185
              +
Sbjct: 267 QLTT 270

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 76.1 bits (187), Expect = 3e-15
 Identities = 38/168 (22%), Positives = 62/168 (36%), Gaps = 15/168 (8%)

Query: 23  SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI---------PHLL 73
                  I +A+ +  LHSKG++  +LKP N      D   +GD G+            +
Sbjct: 164 GVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223

Query: 74  LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS 133
           L      +    ++GT  YM+PEQ         S + D +     + E+L     +  R 
Sbjct: 224 LTPMPAYATHTGQVGTKLYMSPEQIH---GNNYSHKVDIFSLGLILFELLYSFSTQMERV 280

Query: 134 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
              I    VR  + P + +   P    ++          RP  TDI+ 
Sbjct: 281 --RIITD-VRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE 325

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 73.9 bits (182), Expect = 7e-15
 Identities = 35/170 (20%), Positives = 71/170 (41%), Gaps = 13/170 (7%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVL--NLKPFNFILNEADRAV-LGDVGIPHL 72
           +   + +  +  +   + +G+  LH++   ++  +LK  N  +     +V +GD+G    
Sbjct: 122 RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLG---- 177

Query: 73  LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG- 131
            L     +S     +GTP +MAPE ++ +         D + F   ++EM T   P    
Sbjct: 178 -LATLKRASFAKAVIGTPEFMAPEMYEEKY----DESVDVYAFGMCMLEMATSEYPYSEC 232

Query: 132 RSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
           ++  +IY  V    +         P V+ ++ GC   +   R  + D+L 
Sbjct: 233 QNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 72.3 bits (178), Expect = 4e-14
 Identities = 37/164 (22%), Positives = 61/164 (37%), Gaps = 14/164 (8%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG 75
           + G L+          +   +   H+ G    ++KP N +++  D A L D GI      
Sbjct: 127 RQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTD 186

Query: 76  IPLPSSDLPRRLGTPNYMAPEQWQPEVRG-PISFETDSWGFACSIIEMLTGVQPRCGRSV 134
             L        +GT  YMAPE+          ++  D +   C + E LTG  P  G  +
Sbjct: 187 EKLTQLGN--TVGTLYYMAPER----FSESHATYRADIYALTCVLYECLTGSPPYQGDQL 240

Query: 135 DEIYDAVVRRQEIPPIPS----GLPPAVENVLLGCFEYDLRSRP 174
             +   +    +  P PS    G+P A + V+      +   R 
Sbjct: 241 SVMGAHI---NQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRY 281

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 72.5 bits (178), Expect = 5e-14
 Identities = 48/200 (24%), Positives = 68/200 (34%), Gaps = 12/200 (6%)

Query: 6   GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV-L 64
           GS+G  +   + G L       Y     +G+  LH++ IL  ++K  N +L+       L
Sbjct: 135 GSLGQLIK--QMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAAL 192

Query: 65  GDVGIPHLLLGIPLPSSDLPRR--LGTPNYMAPEQWQPEVRG-PISFETDSWGFACSIIE 121
            D G    L    L  S L      GT  +MAPE     V G P   + D W   C ++ 
Sbjct: 193 CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV----VMGKPCDAKVDIWSSCCMMLH 248

Query: 122 MLTGVQPRCGRS-VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
           ML G  P                   I  IP    P     +      +   R    ++ 
Sbjct: 249 MLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELR 308

Query: 181 R-VFKSSQNSVHSDGGWTGH 199
           R V K+ Q        W G 
Sbjct: 309 RKVGKALQEVGGLKSPWKGE 328

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 72.6 bits (178), Expect = 1e-13
 Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 20/166 (12%)

Query: 9   GDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG 68
           G  + + KG KL ++    Y +++   +  LHS G++  +LKP N +L E ++  L D+G
Sbjct: 168 GQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTE-EQLKLIDLG 226

Query: 69  IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
               +       +      GTP + APE     VR   +  TD +    ++  +   +  
Sbjct: 227 AVSRI-------NSFGYLYGTPGFQAPEI----VRTGPTVATDIYTVGRTLAALTLDLPT 275

Query: 129 RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
           R GR VD +        E  P+      +   +L    + D R R 
Sbjct: 276 RNGRYVDGL-------PEDDPVLK-TYDSYGRLLRRAIDPDPRQRF 313

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 68.4 bits (168), Expect = 6e-13
 Identities = 42/183 (22%), Positives = 73/183 (39%), Gaps = 19/183 (10%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG 75
             G LS+     +   +  GI   H   I+  ++KP N +++      + D GI   L  
Sbjct: 104 SHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE 163

Query: 76  IPLPSSDLPRRLGTPNYMAPEQWQPEVRG-PISFETDSWGFACSIIEMLTGVQPRCGRSV 134
             L  ++    LGT  Y +PEQ     +G      TD +     + EML G  P  G + 
Sbjct: 164 TSLTQTNH--VLGTVQYFSPEQ----AKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA 217

Query: 135 DEI-YDAVVRRQEIPPIPS----GLPPAVENVLLGCFEYDLRSRP-----LMTDILRVFK 184
             I    +  +  +P + +     +P ++ NV+L   E D  +R      +  D+  V  
Sbjct: 218 VSIAIKHI--QDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275

Query: 185 SSQ 187
            ++
Sbjct: 276 ENR 278

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 68.8 bits (168), Expect = 2e-12
 Identities = 41/177 (23%), Positives = 72/177 (40%), Gaps = 15/177 (8%)

Query: 1   MKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           +    G  GD    L + G  S +++  YA ++  G+  +H++ ++  +LKP N +L+E 
Sbjct: 271 LDLMNG--GDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEH 328

Query: 60  DRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
               + D+G     L            +GT  YMAPE  Q  V        D +   C +
Sbjct: 329 GHVRISDLG-----LACDFSKKKPHASVGTHGYMAPEVLQKGV--AYDSSADWFSLGCML 381

Query: 120 IEMLTGVQP---RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
            ++L G  P      +   EI    +       +P    P + ++L G  + D+  R
Sbjct: 382 FKLLRGHSPFRQHKTKDKHEIDRMTLTMA--VELPDSFSPELRSLLEGLLQRDVNRR 436

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 66.6 bits (163), Expect = 2e-12
 Identities = 38/196 (19%), Positives = 72/196 (36%), Gaps = 21/196 (10%)

Query: 1   MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M++ E G++ D +   +         +R    + + +  +HS+GI+  +LKP N  ++E+
Sbjct: 94  MEYCENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDES 152

Query: 60  DRAVLGDVGI-----------PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISF 108
               +GD G+                 +P  S +L   +GT  Y+A E       G  + 
Sbjct: 153 RNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDG--TGHYNE 210

Query: 109 ETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI---PPIPSGLPPAVENVLLGC 165
           + D +       EM+       G     I    +R   I   P          + ++   
Sbjct: 211 KIDMYSLGIIFFEMIYP--FSTGMERVNILK-KLRSVSIEFPPDFDDNKMKVEKKIIRLL 267

Query: 166 FEYDLRSRPLMTDILR 181
            ++D   RP    +L 
Sbjct: 268 IDHDPNKRPGARTLLN 283

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 66.5 bits (162), Expect = 4e-12
 Identities = 25/146 (17%), Positives = 52/146 (35%), Gaps = 16/146 (10%)

Query: 6   GSVGDRMAQLK---GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRA 62
           G++ + +   K      +    V  +A+ +   I Q+H   I+  ++KP NFIL      
Sbjct: 152 GTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLE 211

Query: 63  VLGDVGIPHLL----------LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDS 112
              +  +   L          + +    +    +  T  +   E    +   P +++ D 
Sbjct: 212 QDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNK---PWNYQIDY 268

Query: 113 WGFACSIIEMLTGVQPRCGRSVDEIY 138
           +G A ++  ML G   +      E  
Sbjct: 269 FGVAATVYCMLFGTYMKVKNEGGECK 294

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 67.1 bits (164), Expect = 4e-12
 Identities = 29/188 (15%), Positives = 67/188 (35%), Gaps = 8/188 (4%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           ++    ++ + + Q K                  G+  LHS  I+  +LKP N +++  +
Sbjct: 97  IELCAATLQEYVEQ-KDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPN 155

Query: 61  -----RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGF 115
                +A++ D G+   L       S      GT  ++APE    + +   ++  D +  
Sbjct: 156 AHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSA 215

Query: 116 ACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI--PPIPSGLPPAVENVLLGCFEYDLRSR 173
            C    +++      G+S+    + ++    +               ++      D + R
Sbjct: 216 GCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKR 275

Query: 174 PLMTDILR 181
           P    +L+
Sbjct: 276 PSAKHVLK 283

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 65.9 bits (161), Expect = 8e-12
 Identities = 42/173 (24%), Positives = 67/173 (38%), Gaps = 13/173 (7%)

Query: 1   MKFYEGSVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE 58
           M++Y G  GD +  L   G ++       Y  ++   I  +H  G +  ++KP N +L+ 
Sbjct: 140 MEYYVG--GDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDR 197

Query: 59  ADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPE----QWQPEVRGPISFETDSWG 114
                L D G    L       S +   +GTP+Y++PE           G    E D W 
Sbjct: 198 CGHIRLADFGSCLKLRADGTVRSLVA--VGTPDYLSPEILQAVGGGPGTGSYGPECDWWA 255

Query: 115 FACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE---IPPIPSGLPPAVENVLLG 164
                 EM  G  P    S  E Y  +V  +E   +P +  G+P    + +  
Sbjct: 256 LGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQR 308

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 65.1 bits (159), Expect = 9e-12
 Identities = 34/205 (16%), Positives = 70/205 (34%), Gaps = 36/205 (17%)

Query: 15  LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLN--------LKPFNFILNEADRAVLGD 66
           L+   L   +  R  + +A G+  LH +              LK  N ++ +  +  + D
Sbjct: 97  LQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIAD 156

Query: 67  VGIPHLLLGIPLPSSDLPR-RLGTPNYMAPE--QWQPEVRGPISFE-TDSWGFACSII-- 120
           +G+  +              R+GT  YMAPE      +V    S++  D   +A  ++  
Sbjct: 157 LGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDI--WAFGLVLW 214

Query: 121 EMLTGVQPRCGR---------------SVDEIYDAVVRRQEIPPIPSGL-----PPAVEN 160
           E+   +                     S +++   V   Q+ P IP+         ++  
Sbjct: 215 EVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAK 274

Query: 161 VLLGCFEYDLRSRPLMTDILRVFKS 185
           ++  C+  +  +R     I +    
Sbjct: 275 LMKECWYQNPSARLTALRIKKTLTK 299

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 65.1 bits (159), Expect = 1e-11
 Identities = 38/192 (19%), Positives = 66/192 (34%), Gaps = 19/192 (9%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI------ 69
              +   S    +A D+A G+  LHS  I+  +L   N ++ E    V+ D G+      
Sbjct: 101 MDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVD 160

Query: 70  ----PHLLLGIPLPSSDLPR-RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII--EM 122
               P  L  +  P        +G P +MAPE            + D + F   I+  E+
Sbjct: 161 EKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMIN---GRSYDEKVDVFSFG--IVLCEI 215

Query: 123 LTGVQPRCG-RSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
           +  V            +   VR       P   PP+   + + C + D   RP    +  
Sbjct: 216 IGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH 275

Query: 182 VFKSSQNSVHSD 193
             ++ +  +   
Sbjct: 276 WLETLRMHLAGH 287

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 65.5 bits (160), Expect = 1e-11
 Identities = 39/171 (22%), Positives = 69/171 (40%), Gaps = 11/171 (6%)

Query: 1   MKFYEGSVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE 58
           M +Y G  GD +  L     +L       Y  ++   I  +H    +  ++KP N +++ 
Sbjct: 153 MDYYVG--GDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM 210

Query: 59  ADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPE--QWQPEVRGPISFETDSWGFA 116
                L D G    L+      S +   +GTP+Y++PE  Q     +G    E D W   
Sbjct: 211 NGHIRLADFGSCLKLMEDGTVQSSVA--VGTPDYISPEILQAMEGGKGRYGPECDWWSLG 268

Query: 117 CSIIEMLTGVQPRCGRSVDEIYDAVVRRQE---IPPIPSGLPPAVENVLLG 164
             + EML G  P    S+ E Y  ++  +E    P   + +    ++++  
Sbjct: 269 VCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRR 319

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 64.9 bits (159), Expect = 1e-11
 Identities = 46/175 (26%), Positives = 76/175 (43%), Gaps = 13/175 (7%)

Query: 1   MKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M++  G  GD M  +    K  LS    YA ++  G+  LHSKGI+  +LK  N +L++ 
Sbjct: 97  MEYLNG--GDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKD 154

Query: 60  DRAVLGDVGIPHLLLGIPLPSSDLPRRL-GTPNYMAPEQWQPEVRGPISFETDSWGFACS 118
               + D G    +    +          GTP+Y+APE    +     +   D W F   
Sbjct: 155 GHIKIADFG----MCKENMLGDAKTNTFCGTPDYIAPEILLGQ---KYNHSVDWWSFGVL 207

Query: 119 IIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
           + EML G  P  G+  +E++ ++      P  P  L    +++L+  F  +   R
Sbjct: 208 LYEMLIGQSPFHGQDEEELFHSIRMDN--PFYPRWLEKEAKDLLVKLFVREPEKR 260

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 64.2 bits (157), Expect = 2e-11
 Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 16/177 (9%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG 75
             G ++         D  Q +   H  GI+  ++KP N +++  +   + D GI   +  
Sbjct: 109 TEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD 168

Query: 76  IPLPSSDLPRRLGTPNYMAPEQWQPEVRG-PISFETDSWGFACSIIEMLTGVQPRCGRSV 134
                +     +GT  Y++PEQ     RG  +   +D +   C + E+LTG  P  G S 
Sbjct: 169 SGNSVTQTAAVIGTAQYLSPEQ----ARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224

Query: 135 DEIYDAVVRRQEIPPIPS----GLPPAVENVLLGCFEYDLRSRP-----LMTDILRV 182
             +  A    +E P  PS    GL   ++ V+L     +  +R      +  D++RV
Sbjct: 225 VSV--AYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 64.0 bits (156), Expect = 2e-11
 Identities = 34/204 (16%), Positives = 69/204 (33%), Gaps = 34/204 (16%)

Query: 15  LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVL--------NLKPFNFILNEADRAVLGD 66
           L    +++  + + A+  A G+  LH + +           +LK  N ++ +     + D
Sbjct: 131 LNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 190

Query: 67  VGIPHLLLGIPLPSSDLPR-RLGTPNYMAPEQWQPEVRGPISFETDSWG--FACSII--E 121
           +G+              P  R+GT  YMAPE     +     FE+      +A  ++  E
Sbjct: 191 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN-MKHFESFKRADIYAMGLVFWE 249

Query: 122 MLTGVQPRCGR---------------SVDEIYDAVVRRQEIPPIPSGL-----PPAVENV 161
           +                         SV+E+   V  ++  P IP+          +  +
Sbjct: 250 IARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKI 309

Query: 162 LLGCFEYDLRSRPLMTDILRVFKS 185
           +  C+  +  +R     I +    
Sbjct: 310 MRECWYANGAARLTALRIKKTLSQ 333

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 64.0 bits (156), Expect = 2e-11
 Identities = 31/205 (15%), Positives = 65/205 (31%), Gaps = 36/205 (17%)

Query: 15  LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLN--------LKPFNFILNEADRAVLGD 66
           LK   L   ++ + A     G+  LH++              LK  N ++ +     + D
Sbjct: 126 LKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIAD 185

Query: 67  VGIPHLLLGIPLPSSDLPR-RLGTPNYMAPE--QWQPEVRGPISFE-TDSWGFACSII-- 120
           +G+    +         P  R+GT  YM PE            S+   D   ++  +I  
Sbjct: 186 LGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADM--YSFGLILW 243

Query: 121 EMLTGVQPRCGR---------------SVDEIYDAVVRRQEIPPIPSGL-----PPAVEN 160
           E+                         S +++ + V  ++  P  P+          +  
Sbjct: 244 EVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGK 303

Query: 161 VLLGCFEYDLRSRPLMTDILRVFKS 185
           ++  C+ ++  SR     + +    
Sbjct: 304 LMTECWAHNPASRLTALRVKKTLAK 328

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 62.8 bits (153), Expect = 5e-11
 Identities = 37/204 (18%), Positives = 77/204 (37%), Gaps = 42/204 (20%)

Query: 15  LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLN----------LKPFNFILNEADRAVL 64
           LK   +S + +   A  +A+G+  LH     + +          +K  N +L     A +
Sbjct: 113 LKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACI 172

Query: 65  GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWG----FACSII 120
            D G+  L       + D   ++GT  YMAPE       G I+F+ D++     +A  ++
Sbjct: 173 ADFGLA-LKFEAGKSAGDTHGQVGTRRYMAPEVL----EGAINFQRDAFLRIDMYAMGLV 227

Query: 121 --EMLTGVQPRCGR----------------SVDEIYDAVVRRQEIPPIPSGLPP-----A 157
             E+ +      G                 S++++ + VV +++ P +            
Sbjct: 228 LWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAM 287

Query: 158 VENVLLGCFEYDLRSRPLMTDILR 181
           +   +  C+++D  +R     +  
Sbjct: 288 LCETIEECWDHDAEARLSAGCVGE 311

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 63.5 bits (155), Expect = 5e-11
 Identities = 40/177 (22%), Positives = 65/177 (36%), Gaps = 12/177 (6%)

Query: 1   MKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           +    G  GD    L +        V  +  +L   +  L ++ I+  ++KP N +L+E 
Sbjct: 94  VDLLLG--GDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEH 151

Query: 60  DRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
               + D  I  +L      ++      GT  YMAPE +        SF  D W    + 
Sbjct: 152 GHVHITDFNIAAMLPRETQITT----MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTA 207

Query: 120 IEMLTGVQP---RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
            E+L G +P   R   S  EI         +   PS     + ++L    E +   R
Sbjct: 208 YELLRGRRPYHIRSSTSSKEIVHTFE--TTVVTYPSAWSQEMVSLLKKLLEPNPDQR 262

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 63.9 bits (155), Expect = 6e-11
 Identities = 44/182 (24%), Positives = 71/182 (39%), Gaps = 24/182 (13%)

Query: 1   MKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M++  G  GD M  + + G+    +   YA ++A G+  L SKGI+  +LK  N +L+  
Sbjct: 421 MEYVNG--GDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSE 478

Query: 60  DRAVLGDVGIPHLLLGIPLPSSDLPRRL-GTPNYMAPEQWQPEVRGPISFETDSWGFACS 118
               + D G    +    +      +   GTP+Y+APE        P     D W F   
Sbjct: 479 GHIKIADFG----MCKENIWDGVTTKTFCGTPDYIAPEIIA---YQPYGKSVDWWAFGVL 531

Query: 119 IIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL-----------LGCFE 167
           + EML G  P  G   DE++ +++        P  +      +            LGC  
Sbjct: 532 LYEMLAGQAPFEGEDEDELFQSIMEHN--VAYPKSMSKEAVAICKGLMTKHPGKRLGCGP 589

Query: 168 YD 169
             
Sbjct: 590 EG 591

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 60.7 bits (148), Expect = 2e-10
 Identities = 36/166 (21%), Positives = 64/166 (38%), Gaps = 10/166 (6%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG 75
           K  K        Y  +LA  +   HSK ++  ++KP N +L  A    + D G       
Sbjct: 102 KLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG-----WS 156

Query: 76  IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD 135
           +  PSS      GT +Y+ PE  +  +      + D W       E L G  P    +  
Sbjct: 157 VHAPSSRRTDLCGTLDYLPPEMIEGRMHDE---KVDLWSLGVLCYEFLVGKPPFEANTYQ 213

Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
           E Y  + R +     P  +     +++    +++   RP++ ++L 
Sbjct: 214 ETYKRISRVE--FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 61.1 bits (149), Expect = 2e-10
 Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 13/175 (7%)

Query: 1   MKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M+F  G  GD M  + K  +   +    YA ++   ++ LH KGI+  +LK  N +L+  
Sbjct: 103 MEFVNG--GDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHE 160

Query: 60  DRAVLGDVGIPHLLLGIPLPSSDLPRRL-GTPNYMAPEQWQPEVRGPISFETDSWGFACS 118
               L D G    +    + +        GTP+Y+APE  Q           D W     
Sbjct: 161 GHCKLADFG----MCKEGICNGVTTATFCGTPDYIAPEILQ---EMLYGPAVDWWAMGVL 213

Query: 119 IIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
           + EML G  P    + D++++A++  +     P+ L      +L      +   R
Sbjct: 214 LYEMLCGHAPFEAENEDDLFEAILNDE--VVYPTWLHEDATGILKSFMTKNPTMR 266

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 61.3 bits (149), Expect = 3e-10
 Identities = 44/182 (24%), Positives = 70/182 (38%), Gaps = 22/182 (12%)

Query: 1   MKFYEGSVGDRMAQL-KGGKLSLSN---VFRYAIDLAQGILQLHSKGILVLNLKPFNFIL 56
           +    G  GD    +   G+        VF YA ++  G+  LH + I+  +LKP N +L
Sbjct: 263 LTLMNG--GDLKFHIYHMGQAGFPEARAVF-YAAEICCGLEDLHRERIVYRDLKPENILL 319

Query: 57  NEADRAVLGDVGIPHLLLGIPLPSSDLPR-RLGTPNYMAPEQWQPEVRGPISFETDSWGF 115
           ++     + D+G     L + +P     + R+GT  YMAPE  + E     +F  D W  
Sbjct: 320 DDHGHIRISDLG-----LAVHVPEGQTIKGRVGTVGYMAPEVVKNE---RYTFSPDWWAL 371

Query: 116 ACSIIEMLTGVQPRCGR----SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 171
            C + EM+ G  P   R      +E+   V              P   ++       D  
Sbjct: 372 GCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP--EEYSERFSPQARSLCSQLLCKDPA 429

Query: 172 SR 173
            R
Sbjct: 430 ER 431

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 60.3 bits (147), Expect = 4e-10
 Identities = 43/175 (24%), Positives = 70/175 (40%), Gaps = 13/175 (7%)

Query: 1   MKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M++  G  GD M  + + G+    +   YA ++A G+  L SKGI+  +LK  N +L+  
Sbjct: 100 MEYVNG--GDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSE 157

Query: 60  DRAVLGDVGIPHLLLGIPLPSSDLPRRL-GTPNYMAPEQWQPEVRGPISFETDSWGFACS 118
               + D G    +    +      +   GTP+Y+APE        P     D W F   
Sbjct: 158 GHIKIADFG----MCKENIWDGVTTKTFCGTPDYIAPEIIA---YQPYGKSVDWWAFGVL 210

Query: 119 IIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
           + EML G  P  G   DE++ +++        P  +      +  G        R
Sbjct: 211 LYEMLAGQAPFEGEDEDELFQSIMEHN--VAYPKSMSKEAVAICKGLMTKHPGKR 263

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 60.1 bits (146), Expect = 7e-10
 Identities = 35/167 (20%), Positives = 68/167 (40%), Gaps = 7/167 (4%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           M++  G  GD +  +    +       Y  ++   +  +HS G +  ++KP N +L+++ 
Sbjct: 148 MEYMPG--GDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG 205

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPE-VRGPISFETDSWGFACSI 119
              L D G    +    +   D    +GTP+Y++PE  + +   G    E D W     +
Sbjct: 206 HLKLADFGTCMKMNKEGMVRCDTA--VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL 263

Query: 120 IEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG--LPPAVENVLLG 164
            EML G  P    S+   Y  ++  +     P    +    +N++  
Sbjct: 264 YEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICA 310

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 60.1 bits (146), Expect = 7e-10
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 19/126 (15%)

Query: 27  RYAIDLAQGILQ----LHSKGILVLNLKPFNFIL-NEADRAVL--GDVGIPHLLLGIPLP 79
             A  + + +L     LH   I+  +LKP N +L ++   A++   D G+  +       
Sbjct: 136 VDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE----N 191

Query: 80  SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII--EMLTGVQPRCGRSVDEI 137
              +  RLGT  Y+APE     +R     + D W  +  +I   +L G  P  G++  EI
Sbjct: 192 QKKMKERLGTAYYIAPEV----LRKKYDEKCDVW--SIGVILFILLAGYPPFGGQTDQEI 245

Query: 138 YDAVVR 143
              V +
Sbjct: 246 LRKVEK 251

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 60.1 bits (146), Expect = 8e-10
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 19/126 (15%)

Query: 27  RYAIDLAQGILQ----LHSKGILVLNLKPFNFIL-NEADRAVL--GDVGIPHLLLGIPLP 79
             A ++ + IL     LH   I+  ++KP N +L N+     +   D G+          
Sbjct: 146 CDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS----K 201

Query: 80  SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII--EMLTGVQPRCGRSVDEI 137
              L  RLGT  Y+APE     ++   + + D W  +C +I   +L G  P  G++  +I
Sbjct: 202 DYKLRDRLGTAYYIAPEV----LKKKYNEKCDVW--SCGVIMYILLCGYPPFGGQNDQDI 255

Query: 138 YDAVVR 143
              V +
Sbjct: 256 IKKVEK 261

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 58.8 bits (143), Expect = 1e-09
 Identities = 35/175 (20%), Positives = 71/175 (40%), Gaps = 13/175 (7%)

Query: 1   MKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M++  G  G+    L +    +      Y  ++   +  LHS+ ++  ++K  N +L++ 
Sbjct: 84  MEYANG--GELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD 141

Query: 60  DRAVLGDVGIPHLLLGIPLPSSDLPRRL-GTPNYMAPEQWQPEVRGPISFETDSWGFACS 118
               + D G    L    +      +   GTP Y+APE  +           D WG    
Sbjct: 142 GHIKITDFG----LCKEGISDGATMKTFCGTPEYLAPEVLE---DNDYGRAVDWWGLGVV 194

Query: 119 IIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
           + EM+ G  P   +  + +++ ++  +     P  L P  +++L G  + D + R
Sbjct: 195 MYEMMCGRLPFYNQDHERLFELILMEE--IRFPRTLSPEAKSLLAGLLKKDPKQR 247

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 58.9 bits (143), Expect = 1e-09
 Identities = 44/184 (23%), Positives = 73/184 (39%), Gaps = 22/184 (11%)

Query: 1   MKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           +++  G  GD M  + +  KL   +   Y+ +++  +  LH +GI+  +LK  N +L+  
Sbjct: 132 IEYVNG--GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE 189

Query: 60  DRAVLGDVGIPHLLLGIPLPSSDLPRRL-GTPNYMAPEQWQPEVRGPISFETDSWGFACS 118
               L D G    +    L   D      GTPNY+APE  +        F  D W     
Sbjct: 190 GHIKLTDYG----MCKEGLRPGDTTSTFCGTPNYIAPEILR---GEDYGFSVDWWALGVL 242

Query: 119 IIEMLTGVQP---------RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYD 169
           + EM+ G  P             + D ++  ++ +Q    IP  L     +VL      D
Sbjct: 243 MFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ--IRIPRSLSVKAASVLKSFLNKD 300

Query: 170 LRSR 173
            + R
Sbjct: 301 PKER 304

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 58.9 bits (143), Expect = 2e-09
 Identities = 29/126 (23%), Positives = 54/126 (42%), Gaps = 19/126 (15%)

Query: 27  RYAIDLAQGILQ----LHSKGILVLNLKPFNFIL-NEADRAVL--GDVGIPHLLLGIPLP 79
             A  + + +L     +H   I+  +LKP N +L +++  A +   D G+          
Sbjct: 126 VDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE----A 181

Query: 80  SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII--EMLTGVQPRCGRSVDEI 137
           S  +  ++GT  Y+APE     + G    + D W  +  +I   +L+G  P  G +  +I
Sbjct: 182 SKKMKDKIGTAYYIAPEV----LHGTYDEKCDVW--STGVILYILLSGCPPFNGANEYDI 235

Query: 138 YDAVVR 143
              V +
Sbjct: 236 LKKVEK 241

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 58.4 bits (142), Expect = 2e-09
 Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 13/175 (7%)

Query: 1   MKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           + +  G  G+    L +           YA ++A  +  LHS  I+  +LKP N +L+  
Sbjct: 118 LDYING--GELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQ 175

Query: 60  DRAVLGDVGIPHLLLGIPLPSSDLPRRL-GTPNYMAPEQWQPEVRGPISFETDSWGFACS 118
              VL D G    L    +  +       GTP Y+APE      + P     D W     
Sbjct: 176 GHIVLTDFG----LCKENIEHNSTTSTFCGTPEYLAPEVLH---KQPYDRTVDWWCLGAV 228

Query: 119 IIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
           + EML G+ P   R+  E+YD ++ +     +   +  +  ++L G  + D   R
Sbjct: 229 LYEMLYGLPPFYSRNTAEMYDNILNKP--LQLKPNITNSARHLLEGLLQKDRTKR 281

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 58.0 bits (141), Expect = 2e-09
 Identities = 44/184 (23%), Positives = 73/184 (39%), Gaps = 22/184 (11%)

Query: 1   MKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           +++  G  GD M  + +  KL   +   Y+ +++  +  LH +GI+  +LK  N +L+  
Sbjct: 89  IEYVNG--GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE 146

Query: 60  DRAVLGDVGIPHLLLGIPLPSSDLPRRL-GTPNYMAPEQWQPEVRGPISFETDSWGFACS 118
               L D G    +    L   D      GTPNY+APE  +        F  D W     
Sbjct: 147 GHIKLTDYG----MCKEGLRPGDTTSTFCGTPNYIAPEILR---GEDYGFSVDWWALGVL 199

Query: 119 IIEMLTGVQP---------RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYD 169
           + EM+ G  P             + D ++  ++ +Q    IP  L     +VL      D
Sbjct: 200 MFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ--IRIPRSLSVKAASVLKSFLNKD 257

Query: 170 LRSR 173
            + R
Sbjct: 258 PKER 261

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 58.1 bits (141), Expect = 2e-09
 Identities = 39/180 (21%), Positives = 69/180 (38%), Gaps = 16/180 (8%)

Query: 1   MKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           + +  G  G+    L +  + +   V  Y  ++   +  LH  GI+  ++K  N +L+  
Sbjct: 138 LDYING--GELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSN 195

Query: 60  DRAVLGDVGIPHLL--LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFAC 117
              VL D G    L    +   +       GT  YMAP+  +    G      D W    
Sbjct: 196 GHVVLTDFG----LSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGH-DKAVDWWSLGV 250

Query: 118 SIIEMLTGVQP----RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
            + E+LTG  P        S  EI   +++ +  PP P  +    ++++      D + R
Sbjct: 251 LMYELLTGASPFTVDGEKNSQAEISRRILKSE--PPYPQEMSALAKDLIQRLLMKDPKKR 308

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 57.9 bits (140), Expect = 2e-09
 Identities = 33/222 (14%), Positives = 62/222 (27%), Gaps = 45/222 (20%)

Query: 6   GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLN---------LKPFNFIL 56
           GS+      L        +  R A  + +G+  LH++     +         L   N ++
Sbjct: 97  GSLXK---YLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLV 153

Query: 57  NEADRAVLGDVGIPHLLLGIPLPSSDLP-----RRLGTPNYMAPE----QWQPEVRGPIS 107
                 V+ D G+   L G  L             +GT  YMAPE               
Sbjct: 154 KNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESAL 213

Query: 108 FETDSWGFACSIIEMLTGVQPRC------------------GRSVDEIYDAVVRRQEIPP 149
            + D +       E+                            + +++   V R ++ P 
Sbjct: 214 KQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPK 273

Query: 150 IP------SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 185
            P      S    +++  +  C++ D  +R            
Sbjct: 274 FPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAE 315

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 57.8 bits (140), Expect = 3e-09
 Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 18/140 (12%)

Query: 10  DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL--NEADRAVLGDV 67
           DR+A  +  K+S + V  Y     +G+  +H   I+ L++KP N +    +A    + D 
Sbjct: 137 DRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDF 195

Query: 68  GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIE--ML 123
           G+   L     P   +     T  + A     PE+  R P+ F TD W  A  ++   +L
Sbjct: 196 GLATKL----NPDEIVKVTTATAEFAA-----PEIVDREPVGFYTDMW--AIGVLGYVLL 244

Query: 124 TGVQPRCGRSVDEIYDAVVR 143
           +G+ P  G    E    V R
Sbjct: 245 SGLSPFAGEDDLETLQNVKR 264

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 56.8 bits (138), Expect = 4e-09
 Identities = 42/169 (24%), Positives = 68/169 (40%), Gaps = 14/169 (8%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG 75
           +   L+      Y   +  G   LH   ++  +LK  N  LNE     +GD G    L  
Sbjct: 108 RRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFG----LAT 163

Query: 76  IPLPSSDLPRRL-GTPNYMAPEQWQPEVRGPISFETDSWGFACSII--EMLTGVQPRCGR 132
                 +  + L GTPNY+APE      +   SFE D W  +   I   +L G  P    
Sbjct: 164 KVEYDGERKKVLCGTPNYIAPEVLS---KKGHSFEVDVW--SIGCIMYTLLVGKPPFETS 218

Query: 133 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
            + E Y  + + +    IP  + P   +++    + D  +RP + ++L 
Sbjct: 219 CLKETYLRIKKNE--YSIPKHINPVAASLIQKMLQTDPTARPTINELLN 265

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 57.9 bits (140), Expect = 5e-09
 Identities = 34/151 (22%), Positives = 56/151 (37%), Gaps = 14/151 (9%)

Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPR-R 86
           Y   +  G+  LH + I+  +LKP N +L++     + D+G    L           +  
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLG----LAVELKAGQTKTKGY 349

Query: 87  LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR----SVDEIYDAVV 142
            GTP +MAPE    E      F  D +    ++ EM+    P   R       E+   V+
Sbjct: 350 AGTPGFMAPELLLGE---EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVL 406

Query: 143 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
            +      P    PA ++      + D   R
Sbjct: 407 EQA--VTYPDKFSPASKDFCEALLQKDPEKR 435

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 57.4 bits (139), Expect = 5e-09
 Identities = 37/175 (21%), Positives = 71/175 (40%), Gaps = 12/175 (6%)

Query: 1   MKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNE 58
           M++  G  G+    L +    S      Y  ++   +  LHS K ++  +LK  N +L++
Sbjct: 227 MEYANG--GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK 284

Query: 59  ADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACS 118
                + D G+    +             GTP Y+APE  +           D WG    
Sbjct: 285 DGHIKITDFGLCKEGIKDGATMKTF---CGTPEYLAPEVLE---DNDYGRAVDWWGLGVV 338

Query: 119 IIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
           + EM+ G  P   +  +++++ ++  +     P  L P  +++L G  + D + R
Sbjct: 339 MYEMMCGRLPFYNQDHEKLFELILMEE--IRFPRTLGPEAKSLLSGLLKKDPKQR 391

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 56.8 bits (138), Expect = 5e-09
 Identities = 42/174 (24%), Positives = 71/174 (40%), Gaps = 11/174 (6%)

Query: 1   MKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           +++  G  G+   QL + G         Y  +++  +  LH KGI+  +LKP N +LN  
Sbjct: 100 LEYLSG--GELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQ 157

Query: 60  DRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
               L D G+    +     +       GT  YMAPE      R   +   D W     +
Sbjct: 158 GHVKLTDFGLCKESIHDGTVTHTF---CGTIEYMAPEILM---RSGHNRAVDWWSLGALM 211

Query: 120 IEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
            +MLTG  P  G +  +  D +++ +    +P  L     ++L    + +  SR
Sbjct: 212 YDMLTGAPPFTGENRKKTIDKILKCK--LNLPPYLTQEARDLLKKLLKRNAASR 263

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 57.4 bits (139), Expect = 5e-09
 Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 19/126 (15%)

Query: 27  RYAIDLAQGILQ----LHSKGILVLNLKPFNFIL-NEADRAVL--GDVGIPHLLLGIPLP 79
             A  + + +      +H   I+  +LKP N +L ++     +   D G+          
Sbjct: 121 HDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ----Q 176

Query: 80  SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII--EMLTGVQPRCGRSVDEI 137
           ++ +  R+GT  Y+APE     +RG    + D W  +  +I   +L+G  P  G++  +I
Sbjct: 177 NTKMKDRIGTAYYIAPEV----LRGTYDEKCDVW--SAGVILYILLSGTPPFYGKNEYDI 230

Query: 138 YDAVVR 143
              V  
Sbjct: 231 LKRVET 236

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 57.0 bits (138), Expect = 6e-09
 Identities = 33/127 (25%), Positives = 52/127 (40%), Gaps = 21/127 (16%)

Query: 27  RYAIDLAQGILQ----LHSKGILVLNLKPFNFILNEADRAVL--GDVGIPHLLLGIPLPS 80
              I   + I +    +H   IL L+LKP N +    D   +   D G+         P 
Sbjct: 187 LDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRY----KPR 242

Query: 81  SDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIE--MLTGVQPRCGRSVDE 136
             L    GTP ++A     PEV     +SF TD W  +  +I   +L+G+ P  G +  E
Sbjct: 243 EKLKVNFGTPEFLA-----PEVVNYDFVSFPTDMW--SVGVIAYMLLSGLSPFLGDNDAE 295

Query: 137 IYDAVVR 143
             + ++ 
Sbjct: 296 TLNNILA 302

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 56.0 bits (136), Expect = 6e-09
 Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 23/129 (17%)

Query: 27  RYAIDLAQGILQ----LHSKGILVLNLKPFNFIL---NEADRAV-LGDVGIPHLLLGIPL 78
             A    + IL     LHSK I   +LKP N +L   N  +  + L D GI H +     
Sbjct: 108 DEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI----E 163

Query: 79  PSSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIE--MLTGVQPRCGRSV 134
             ++     GTP ++A     PE+    P+  E D W  +  +I   +L+G  P  G + 
Sbjct: 164 AGNEFKNIFGTPEFVA-----PEIVNYEPLGLEADMW--SIGVITYILLSGASPFLGETK 216

Query: 135 DEIYDAVVR 143
            E    +  
Sbjct: 217 QETLTNISA 225

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 56.4 bits (137), Expect = 6e-09
 Identities = 50/175 (28%), Positives = 75/175 (42%), Gaps = 13/175 (7%)

Query: 1   MKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           + F  G  GD   +L K    +  +V  Y  +LA  +  LHS GI+  +LKP N +L+E 
Sbjct: 105 LDFLRG--GDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEE 162

Query: 60  DRAVLGDVGIPHLLLGIPLPSSDLPRRL-GTPNYMAPEQWQPEVRGPISFETDSWGFACS 118
               L D G    L    +          GT  YMAPE      R   +   D W F   
Sbjct: 163 GHIKLTDFG----LSKESIDHEKKAYSFCGTVEYMAPEVVN---RRGHTQSADWWSFGVL 215

Query: 119 IIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
           + EMLTG  P  G+   E    +++ +    +P  L P  +++L   F+ +  +R
Sbjct: 216 MFEMLTGTLPFQGKDRKETMTMILKAK--LGMPQFLSPEAQSLLRMLFKRNPANR 268

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 56.5 bits (137), Expect = 6e-09
 Identities = 27/140 (19%), Positives = 53/140 (37%), Gaps = 18/140 (12%)

Query: 10  DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVL--GDV 67
           +R+      +L+   +  Y   + + +  LHS  I   +++P N I      + +   + 
Sbjct: 90  ERINT-SAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEF 148

Query: 68  GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIE--ML 123
           G    L     P  +       P Y A     PEV     +S  TD W  +   +   +L
Sbjct: 149 GQARQL----KPGDNFRLLFTAPEYYA-----PEVHQHDVVSTATDMW--SLGTLVYVLL 197

Query: 124 TGVQPRCGRSVDEIYDAVVR 143
           +G+ P    +  +I + ++ 
Sbjct: 198 SGINPFLAETNQQIIENIMN 217

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 56.2 bits (136), Expect = 8e-09
 Identities = 31/129 (24%), Positives = 49/129 (37%), Gaps = 23/129 (17%)

Query: 27  RYAIDLAQGILQ----LHSKGILVLNLKPFNFIL--NEADRAVL--GDVGIPHLLLGIPL 78
             A    + IL     LH+K I   +LKP N +L         +   D G+ H +     
Sbjct: 115 EEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI----E 170

Query: 79  PSSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIE--MLTGVQPRCGRSV 134
              +     GTP ++A     PE+    P+  E D W  +  +I   +L+G  P  G + 
Sbjct: 171 DGVEFKNIFGTPEFVA-----PEIVNYEPLGLEADMW--SIGVITYILLSGASPFLGDTK 223

Query: 135 DEIYDAVVR 143
            E    +  
Sbjct: 224 QETLANITA 232

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 56.1 bits (136), Expect = 9e-09
 Identities = 31/129 (24%), Positives = 49/129 (37%), Gaps = 23/129 (17%)

Query: 27  RYAIDLAQGILQ----LHSKGILVLNLKPFNFIL--NEADRAVL--GDVGIPHLLLGIPL 78
             A    + IL     LH+K I   +LKP N +L         +   D G+ H +     
Sbjct: 115 EEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI----E 170

Query: 79  PSSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIE--MLTGVQPRCGRSV 134
              +     GTP ++A     PE+    P+  E D W  +  +I   +L+G  P  G + 
Sbjct: 171 DGVEFKNIFGTPEFVA-----PEIVNYEPLGLEADMW--SIGVITYILLSGASPFLGDTK 223

Query: 135 DEIYDAVVR 143
            E    +  
Sbjct: 224 QETLANITS 232

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 56.2 bits (136), Expect = 9e-09
 Identities = 41/166 (24%), Positives = 65/166 (39%), Gaps = 12/166 (7%)

Query: 18  GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP 77
             L+      Y   +  G   LH   ++  +LK  N  LNE     +GD G   L   + 
Sbjct: 136 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFG---LATKVE 192

Query: 78  LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII--EMLTGVQPRCGRSVD 135
                     GTPNY+APE      +   SFE D W  +   I   +L G  P     + 
Sbjct: 193 YDGERKKVLCGTPNYIAPEVLS---KKGHSFEVDVW--SIGCIMYTLLVGKPPFETSCLK 247

Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
           E Y  + + +    IP  + P   +++    + D  +RP + ++L 
Sbjct: 248 ETYLRIKKNE--YSIPKHINPVAASLIQKMLQTDPTARPTINELLN 291

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 56.8 bits (137), Expect = 9e-09
 Identities = 32/138 (23%), Positives = 60/138 (43%), Gaps = 14/138 (10%)

Query: 10  DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL--NEADRAVLGDV 67
           +++A  +  K+S      Y   + +G+  +H    + L+LKP N +     ++   L D 
Sbjct: 243 EKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDF 301

Query: 68  GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIE--MLTG 125
           G+   L     P   +    GT  + APE  + +   P+ + TD W  +  ++   +L+G
Sbjct: 302 GLTAHL----DPKQSVKVTTGTAEFAAPEVAEGK---PVGYYTDMW--SVGVLSYILLSG 352

Query: 126 VQPRCGRSVDEIYDAVVR 143
           + P  G + DE    V  
Sbjct: 353 LSPFGGENDDETLRNVKS 370

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 55.7 bits (135), Expect = 1e-08
 Identities = 36/141 (25%), Positives = 58/141 (41%), Gaps = 18/141 (12%)

Query: 10  DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL-NEADRAVL--GD 66
                     +S ++V R    + +G+  LH   I+ L+LKP N +L +      +   D
Sbjct: 118 SLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVD 177

Query: 67  VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIE--M 122
            G+   +      + +L   +GTP Y+A     PE+    PI+  TD W     II   +
Sbjct: 178 FGMSRKIG----HACELREIMGTPEYLA-----PEILNYDPITTATDMW--NIGIIAYML 226

Query: 123 LTGVQPRCGRSVDEIYDAVVR 143
           LT   P  G    E Y  + +
Sbjct: 227 LTHTSPFVGEDNQETYLNISQ 247

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 55.7 bits (135), Expect = 1e-08
 Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 23/129 (17%)

Query: 27  RYAIDLAQGILQ----LHSKGILVLNLKPFNFIL--NEADRAVL--GDVGIPHLLLGIPL 78
             A +  + IL     LHS  I   +LKP N +L      +  +   D G+ H +     
Sbjct: 114 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI----D 169

Query: 79  PSSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIE--MLTGVQPRCGRSV 134
             ++     GTP ++A     PE+    P+  E D W  +  +I   +L+G  P  G + 
Sbjct: 170 FGNEFKNIFGTPEFVA-----PEIVNYEPLGLEADMW--SIGVITYILLSGASPFLGDTK 222

Query: 135 DEIYDAVVR 143
            E    V  
Sbjct: 223 QETLANVSA 231

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 54.9 bits (133), Expect = 1e-08
 Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 14/168 (8%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG 75
           K G+        +  +LA  +   H + ++  ++KP N ++       + D G       
Sbjct: 107 KHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG-----WS 161

Query: 76  IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII--EMLTGVQPRCGRS 133
           +  PS       GT +Y+ PE  + +       + D W     ++  E L G+ P    S
Sbjct: 162 VHAPSLRRRTMCGTLDYLPPEMIEGKTHDE---KVDLW--CAGVLCYEFLVGMPPFDSPS 216

Query: 134 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
             E +  +V        P  L    ++++     Y    R  +  ++ 
Sbjct: 217 HTETHRRIVNVD--LKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 55.2 bits (133), Expect = 2e-08
 Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 12/126 (9%)

Query: 27  RYAIDLAQGILQ----LHSKGILVLNLKPFNFILNEADRAVL--GDVGI-PHLLLGIPLP 79
           +   ++ + I      LH++GI   ++KP NF+ +      +   D G+           
Sbjct: 168 KLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGE 227

Query: 80  SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII--EMLTGVQPRCGRSVDEI 137
              +  + GTP ++APE            + D+W  +  ++   +L G  P  G +  + 
Sbjct: 228 YYGMTTKAGTPYFVAPEVLNTTNE-SYGPKCDAW--SAGVLLHLLLMGAVPFPGVNDADT 284

Query: 138 YDAVVR 143
              V+ 
Sbjct: 285 ISQVLN 290

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 54.9 bits (133), Expect = 2e-08
 Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 16/140 (11%)

Query: 39  LHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR---LGTPNYMAP 95
           LH KGI+  +LKP N +LNE     + D G       +  P S   R    +GT  Y++P
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFG----TAKVLSPESKQARANSFVGTAQYVSP 201

Query: 96  E--QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG 153
           E    +   +      +D W   C I +++ G+ P    +   I+  +++ +     P  
Sbjct: 202 ELLTEKSACKS-----SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE--YDFPEK 254

Query: 154 LPPAVENVLLGCFEYDLRSR 173
             P   +++      D   R
Sbjct: 255 FFPKARDLVEKLLVLDATKR 274

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 51.0 bits (123), Expect = 3e-07
 Identities = 40/188 (21%), Positives = 70/188 (37%), Gaps = 19/188 (10%)

Query: 14  QLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL 73
           + +    S +    +   +  G+L LHS GIL  +L   N +L       + D G     
Sbjct: 103 KNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFG----- 157

Query: 74  LGIPLPSSDLPRRL--GTPNYMAPEQWQPEVRGPISFETDSWGFACSII--EMLTGVQPR 129
           L   L           GTPNY++PE      R     E+D W  +   +   +L G  P 
Sbjct: 158 LATQLKMPHEKHYTLCGTPNYISPEIAT---RSAHGLESDVW--SLGCMFYTLLIGRPPF 212

Query: 130 CGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR---VFKSS 186
              +V    + VV       +PS L    ++++      +   R  ++ +L    + ++S
Sbjct: 213 DTDTVKNTLNKVVLADYE--MPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNS 270

Query: 187 QNSVHSDG 194
                 +G
Sbjct: 271 STKSKDEG 278

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 50.3 bits (121), Expect = 5e-07
 Identities = 31/143 (21%), Positives = 60/143 (41%), Gaps = 21/143 (14%)

Query: 10  DRMAQLKGGKLSLSNVFRYAIDLAQGILQ----LHSKGILVLNLKPFNFIL-NEADRAVL 64
           +R+   +    +LS    Y  +L + ++      HS+ ++  +LKP N +  + +  + +
Sbjct: 109 ERIVSAQARGKALSE--GYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPI 166

Query: 65  --GDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIE- 121
              D G+  L               GT  YMAPE      +  ++F+ D W  +  ++  
Sbjct: 167 KIIDFGLAELFK----SDEHSTNAAGTALYMAPEV----FKRDVTFKCDIW--SAGVVMY 216

Query: 122 -MLTGVQPRCGRSVDEIYDAVVR 143
            +LTG  P  G S++E+      
Sbjct: 217 FLLTGCLPFTGTSLEEVQQKATY 239

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 50.1 bits (120), Expect = 6e-07
 Identities = 24/171 (14%), Positives = 39/171 (22%), Gaps = 38/171 (22%)

Query: 9   GDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG 68
           G  + ++     S     R    LA      H  G+ +    P    ++     VL    
Sbjct: 115 GGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPA 174

Query: 69  IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
                                   M             + + D  G   S+  +L    P
Sbjct: 175 -----------------------TMPDA----------NPQDDIRGIGASLYALLVNRWP 201

Query: 129 RCGRSVDEIYDAVVRR-QEIPPIPS----GLPPAVENVLLGCFEYDLRSRP 174
                V        R     P  P+     +P  +  V     + D   R 
Sbjct: 202 LPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIRS 252

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 50.1 bits (119), Expect = 1e-06
 Identities = 30/152 (19%), Positives = 53/152 (34%), Gaps = 15/152 (9%)

Query: 6   GSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV- 63
           G +   + Q      L    +     D++  +  LH   I+  +LKP N +L    + + 
Sbjct: 103 GDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLI 162

Query: 64  --LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII- 120
             + D+G    L             +GT  Y+APE  + +         D W  +   + 
Sbjct: 163 HKIIDLGYAKELD----QGELCTEFVGTLQYLAPELLEQKKYTV---TVDYW--SFGTLA 213

Query: 121 -EMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 151
            E +TG +P         +   VR +    I 
Sbjct: 214 FECITGFRPFLPNWQPVQWHGKVREKSNEHIV 245

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 48.8 bits (117), Expect = 2e-06
 Identities = 38/176 (21%), Positives = 70/176 (39%), Gaps = 9/176 (5%)

Query: 9   GDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG 68
           G  M       LS      Y  DL +GI  LH + I+  ++KP N ++ E     + D G
Sbjct: 123 GPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFG 182

Query: 69  IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII--EMLTGV 126
           + +   G     + L   +GTP +MAPE      +       D W  A  +     + G 
Sbjct: 183 VSNEFKG---SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVW--AMGVTLYCFVFGQ 237

Query: 127 QPRCGRSVDEIYDAVVRRQ-EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
            P     +  ++  +  +  E P  P  +   +++++    + +  SR ++ +I  
Sbjct: 238 CPFMDERIMCLHSKIKSQALEFPDQPD-IAEDLKDLITRMLDKNPESRIVVPEIKL 292

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 47.9 bits (114), Expect = 5e-06
 Identities = 41/181 (22%), Positives = 71/181 (39%), Gaps = 21/181 (11%)

Query: 6   GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG-ILVLNLKPFNFILNEADRAVL 64
           GS+   +   K G++    + + +I + +G+  L  K  I+  ++KP N ++N      L
Sbjct: 116 GSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKL 173

Query: 65  GDVGIPHLLLGIPLPSSDLPRRL-----GTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
            D G+          S  L   +     GT +YM+PE+ Q       S ++D W    S+
Sbjct: 174 CDFGV----------SGQLIDSMANSFVGTRSYMSPERLQGT---HYSVQSDIWSMGLSL 220

Query: 120 IEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
           +EM  G  P       E+      + E     +   P      L  F  D R    + ++
Sbjct: 221 VEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFEL 280

Query: 180 L 180
           L
Sbjct: 281 L 281

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 47.4 bits (113), Expect = 5e-06
 Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 20/136 (14%)

Query: 1   MKFYEGSVGDRMAQLKGGKLS---LSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN 57
           M++  GS  D + ++    L    ++ V        QG+  LHS  ++  ++K  N +L+
Sbjct: 133 MEYCLGSASDLL-EVHKKPLQEVEIAAVTH---GALQGLAYLHSHNMIHRDVKAGNILLS 188

Query: 58  EADRAVLGDVGIPHLLLGIPLPSSDLPRR---LGTPNYMAPEQWQPEVRGPISFETDSWG 114
           E     LGD G           +S +      +GTP +MAPE       G    + D W 
Sbjct: 189 EPGLVKLGDFGS----------ASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWS 238

Query: 115 FACSIIEMLTGVQPRC 130
              + IE+     P  
Sbjct: 239 LGITCIELAERKPPLF 254

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 47.3 bits (113), Expect = 6e-06
 Identities = 34/150 (22%), Positives = 55/150 (36%), Gaps = 19/150 (12%)

Query: 28  YAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRL 87
           YA  +      LHS  ++  +LKP N ++++     + D G           +  +  R 
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF----------AKRVKGRT 195

Query: 88  ----GTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR 143
               GTP  +APE          +   D W     I EM  G  P       +IY+ +V 
Sbjct: 196 WTLCGTPEALAPEIIL---SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV- 251

Query: 144 RQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
                  PS     ++++L    + DL  R
Sbjct: 252 -SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 47.1 bits (113), Expect = 7e-06
 Identities = 45/178 (25%), Positives = 71/178 (39%), Gaps = 22/178 (12%)

Query: 1   MKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M + EG  G+  + L K  +        YA ++   +  LHSK I+  +LKP N +L++ 
Sbjct: 85  MDYIEG--GELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKN 142

Query: 60  DRAVLGDVGIPHLLLGIPLPSSDLPRRL----GTPNYMAPEQWQPEVRGPISFETDSWGF 115
               + D G           +  +P       GTP+Y+APE        P +   D W F
Sbjct: 143 GHIKITDFGF----------AKYVPDVTYTLCGTPDYIAPEVVS---TKPYNKSIDWWSF 189

Query: 116 ACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 173
              I EML G  P    +  + Y+ ++        P      V+++L      DL  R
Sbjct: 190 GILIYEMLAGYTPFYDSNTMKTYEKIL--NAELRFPPFFNEDVKDLLSRLITRDLSQR 245

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 47.3 bits (113), Expect = 7e-06
 Identities = 39/175 (22%), Positives = 66/175 (37%), Gaps = 14/175 (8%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG 75
           +G +L +  + +   D A G+  L SK  +  +L   N ++ E +   + D G     + 
Sbjct: 206 EGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFG-----MS 260

Query: 76  IPLPSSDLPRRLGTPNY----MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRC 130
                       G         APE       G  S E+D W F   + E  + G  P  
Sbjct: 261 REEADGVYAASGGLRQVPVKWTAPEALN---YGRYSSESDVWSFGILLWETFSLGASPYP 317

Query: 131 GRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 185
             S  +  + V +   +P  P   P AV  ++  C+ Y+   RP  + I +  +S
Sbjct: 318 NLSNQQTREFVEKGGRLPC-PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQS 371

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 46.8 bits (112), Expect = 7e-06
 Identities = 25/126 (19%), Positives = 49/126 (38%), Gaps = 19/126 (15%)

Query: 27  RYAIDLAQGILQ----LHSKGILVLNLKPFNFIL-NEADRAVL--GDVGIPHLLLGIPLP 79
             A  + + +L      H   +   +LKP NF+   ++  + L   D G+         P
Sbjct: 106 SDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK----P 161

Query: 80  SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIE--MLTGVQPRCGRSVDEI 137
              +  ++GTP Y++P+     + G    E D W  +  ++   +L G  P    +  E+
Sbjct: 162 GKMMRTKVGTPYYVSPQV----LEGLYGPECDEW--SAGVMMYVLLCGYPPFSAPTDSEV 215

Query: 138 YDAVVR 143
              +  
Sbjct: 216 MLKIRE 221

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 47.3 bits (113), Expect = 8e-06
 Identities = 34/128 (26%), Positives = 49/128 (38%), Gaps = 21/128 (16%)

Query: 27  RYAIDLAQGILQ----LHSKGILVLNLKPFNFIL-NEADRA--VLGDVGIPHLLLGIPLP 79
             A    Q IL+     H  G++  NLKP N +L ++   A   L D G+   + G    
Sbjct: 110 ADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG---E 166

Query: 80  SSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIE--MLTGVQPRCGRSVD 135
                   GTP Y++     PEV  + P     D W  AC +I   +L G  P       
Sbjct: 167 QQAWFGFAGTPGYLS-----PEVLRKDPYGKPVDLW--ACGVILYILLVGYPPFWDEDQH 219

Query: 136 EIYDAVVR 143
            +Y  +  
Sbjct: 220 RLYQQIKA 227

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 46.3 bits (110), Expect = 1e-05
 Identities = 28/153 (18%), Positives = 52/153 (33%), Gaps = 20/153 (13%)

Query: 32  LAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPN 91
           L   +  L  K I+  ++K  N ++ E     L D G                   GT  
Sbjct: 139 LVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFG----SAAYLERGKLFYTFCGTIE 194

Query: 92  YMAPEQWQPEV-RGPISFETDSWGFACSII--EMLTGVQPRCGRSVDEIYDAVVRRQEIP 148
           Y APE       RGP   E + W  +  +    ++    P C   ++E  +A +      
Sbjct: 195 YCAPEVLMGNPYRGP---ELEMW--SLGVTLYTLVFEENPFCE--LEETVEAAIH----- 242

Query: 149 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
             P  +   + +++ G  +     R  +  ++ 
Sbjct: 243 -PPYLVSKELMSLVSGLLQPVPERRTTLEKLVT 274

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 45.7 bits (109), Expect = 2e-05
 Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 19/126 (15%)

Query: 27  RYAIDLAQGILQ----LHSKGILVLNLKPFNFIL-NEADRAVL--GDVGIPHLLLGIPLP 79
             A  + + +      +H   I+  +LKP N +L ++     +   D G    L      
Sbjct: 121 HDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFG----LSTCFQQ 176

Query: 80  SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIE--MLTGVQPRCGRSVDEI 137
           ++ +  R+GT  Y+APE     +RG    + D W  +  +I   +L+G  P  G++  +I
Sbjct: 177 NTKMKDRIGTAYYIAPEV----LRGTYDEKCDVW--SAGVILYILLSGTPPFYGKNEYDI 230

Query: 138 YDAVVR 143
              V  
Sbjct: 231 LKRVET 236

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 32/126 (25%), Positives = 48/126 (38%), Gaps = 14/126 (11%)

Query: 23  SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSD 82
             + R    L + I  LH   I+  +LKP N +L++     L D G    L     P   
Sbjct: 127 RKIMR---ALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD----PGEK 179

Query: 83  LPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIE--MLTGVQPRCGRSVDEI 137
           L    GTP+Y+APE       +       E D W  +  +I   +L G  P   R    +
Sbjct: 180 LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMW--STGVIMYTLLAGSPPFWHRKQMLM 237

Query: 138 YDAVVR 143
              ++ 
Sbjct: 238 LRMIMS 243

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 37/128 (28%), Positives = 52/128 (40%), Gaps = 22/128 (17%)

Query: 27  RYAIDLAQGILQ----LHSKGILVLNLKPFNFIL-NEADRAVL--GDVGIPHLLLGIPLP 79
             A    Q IL+     HS GI+  NLKP N +L ++A  A +   D G+   +      
Sbjct: 128 ADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN----D 183

Query: 80  SSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIE--MLTGVQPRCGRSVD 135
           S       GTP Y++     PEV  + P S   D W  AC +I   +L G  P       
Sbjct: 184 SEAWHGFAGTPGYLS-----PEVLKKDPYSKPVDIW--ACGVILYILLVGYPPFWDEDQH 236

Query: 136 EIYDAVVR 143
            +Y  +  
Sbjct: 237 RLYAQIKA 244

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.4 bits (109), Expect = 2e-05
 Identities = 65/469 (13%), Positives = 123/469 (26%), Gaps = 147/469 (31%)

Query: 28  YAIDLAQGILQLHSKGILVLNLKPF--NFILN---EADRAVLGD------VGIPH----- 71
           + +D   G  Q   K IL +    F  NF      +  +++L        +         
Sbjct: 5   HHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGT 64

Query: 72  -LLLGIPL--PSSDLPRRLGT---PNY--MAPEQWQPEVRGPISFETDSWGFACSIIEML 123
             L    L      + + +      NY  +     + E R P S  T    +      + 
Sbjct: 65  LRLFWTLLSKQEEMVQKFVEEVLRINYKFLM-SPIKTEQRQP-SMMTRM--YIEQRDRLY 120

Query: 124 TGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 183
              Q     +       V R Q    +   L              +LR    +       
Sbjct: 121 NDNQVFAKYN-------VSRLQPYLKLRQAL-------------LELRPAKNVL------ 154

Query: 184 KSSQNSVHSDGGWTGHGSRILPDKSSSGYTEWFLSKEDLKVDDVVRSRKPPNSF------ 237
                 +    G +G        K+        ++ +       V+ +     F      
Sbjct: 155 ------IDGVLG-SG--------KTW-------VALDVCL-SYKVQCKMDFKIFWLNLKN 191

Query: 238 --KPEN-MDVPEGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVR 294
              PE  +++ +  +  ++ N    S      H  +  LR+H           +    +R
Sbjct: 192 CNSPETVLEMLQKLLYQIDPNWTSRSD-----HSSNIKLRIH-----------SIQAELR 235

Query: 295 --LKEEDRRHSPVGILHSIQ------------------RDGSVAVGFLGLETLWKGHFSE 334
             LK +   +  + +L ++Q                  R   V   FL   T    H S 
Sbjct: 236 RLLKSKPYENCLL-VLLNVQNAKAWNAFNLSCKILLTTRFKQVT-DFLSAAT--TTHISL 291

Query: 335 LQMAESYCVGQFVRLKANVVS-PQFEWPRKREGVWATGRICMVVPNGCLIVRFPGRLTFG 393
              + +    +   L    +     + PR          +    P     +         
Sbjct: 292 DHHSMTLTPDEVKSLLLKYLDCRPQDLPR---------EVLTTNP---RRLS-----IIA 334

Query: 394 EQCSSFLADPAEVEVVTFNTCPGMVKK-YQHLEDLHWAVRPLFIALGLF 441
           E     LA     + V  +    +++     LE      R +F  L +F
Sbjct: 335 ESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAE--YRKMFDRLSVF 381

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 34/154 (22%), Positives = 55/154 (35%), Gaps = 22/154 (14%)

Query: 32  LAQGILQLHSKGILVLNLKPFNFILNEADRAV-LGDVGIPHLLLGIPLPSSDLPRRLGTP 90
           +   I   HS+G++  ++K  N +++       L D G   LL   P    D     GT 
Sbjct: 148 VVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFD-----GTR 202

Query: 91  NYMAPEQWQPEV-RGPISFETDSWGFACSII--EMLTGVQPRCGRSVDEIYDAVVRRQEI 147
            Y  PE                 W  +  I+  +M+ G  P       EI +A +     
Sbjct: 203 VYSPPEWISRHQYHAL---PATVW--SLGILLYDMVCGDIPFERD--QEILEAELH---- 251

Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
              P+ + P    ++  C      SRP + +IL 
Sbjct: 252 --FPAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 45.7 bits (108), Expect = 2e-05
 Identities = 19/174 (10%), Positives = 58/174 (33%), Gaps = 33/174 (18%)

Query: 1   MKFYE-GSVGDRMAQLKGGKLS---LSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL 56
             F   GS  D +       ++   ++ + +    + + +  +H  G +  ++K  + ++
Sbjct: 105 TSFMAYGSAKDLICTHFMDGMNELAIAYILQ---GVLKALDYIHHMGYVHRSVKASHILI 161

Query: 57  NEADRAVLGDVGIPHLLLGI----PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDS 112
           +   +  L  +     ++       +        +    +++PE  Q  ++G    ++D 
Sbjct: 162 SVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQG-YDAKSDI 220

Query: 113 WGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP------IPSGLPPAVEN 160
           +    +  E+  G  P                 ++P         +G  P + +
Sbjct: 221 YSVGITACELANGHVPFK---------------DMPATQMLLEKLNGTVPCLLD 259

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 45.4 bits (108), Expect = 3e-05
 Identities = 33/127 (25%), Positives = 48/127 (37%), Gaps = 18/127 (14%)

Query: 23  SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL-NEADRAVL--GDVGIPHLLLGIPLP 79
           + + R   D+   I  LHS  I   ++KP N +  ++   AVL   D G           
Sbjct: 131 AEIMR---DIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG-----FAKETT 182

Query: 80  SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIE--MLTGVQPRCGRSVDEI 137
            + L     TP Y+APE   PE         D W  +  +I   +L G  P    +   I
Sbjct: 183 QNALQTPCYTPYYVAPEVLGPEKYDK---SCDMW--SLGVIMYILLCGFPPFYSNTGQAI 237

Query: 138 YDAVVRR 144
              + RR
Sbjct: 238 SPGMKRR 244

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 45.1 bits (107), Expect = 3e-05
 Identities = 44/199 (22%), Positives = 74/199 (37%), Gaps = 47/199 (23%)

Query: 6   GSVGDRMAQLKGGKLS---LSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRA 62
           GSV D +   KG  L    ++ + R   ++ +G+  LH   ++  ++K  N +L E    
Sbjct: 112 GSVTDLIKNTKGNTLKEEWIAYICR---EILRGLSHLHQHKVIHRDIKGQNVLLTENAEV 168

Query: 63  VLGDVGIPHLLLGIPLPSSDLPRR---LGTPNYMAPE--QWQPEVRGPISFETDSWGFAC 117
            L D G+   L         + RR   +GTP +MAPE             F++D W    
Sbjct: 169 KLVDFGVSAQL------DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGI 222

Query: 118 SIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP------IPSGLPPAVE---------NVL 162
           + IEM  G  P C               ++ P      IP    P ++         + +
Sbjct: 223 TAIEMAEGAPPLC---------------DMHPMRALFLIPRNPAPRLKSKKWSKKFQSFI 267

Query: 163 LGCFEYDLRSRPLMTDILR 181
             C   +   RP    +++
Sbjct: 268 ESCLVKNHSQRPATEQLMK 286

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 45.0 bits (107), Expect = 4e-05
 Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 22/128 (17%)

Query: 27  RYAIDLAQGILQ----LHSKGILVLNLKPFNFIL-NEADRAVL--GDVGIPHLLLGIPLP 79
             A    + IL+     H   I+  ++KP   +L ++ + A +  G  G+   L      
Sbjct: 130 AVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE---S 186

Query: 80  SSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIE--MLTGVQPRCGRSVD 135
                 R+GTP++MA     PEV  R P     D W   C +I   +L+G  P  G   +
Sbjct: 187 GLVAGGRVGTPHFMA-----PEVVKREPYGKPVDVW--GCGVILFILLSGCLPFYGTK-E 238

Query: 136 EIYDAVVR 143
            +++ +++
Sbjct: 239 RLFEGIIK 246

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 44.7 bits (106), Expect = 4e-05
 Identities = 33/178 (18%), Positives = 55/178 (30%), Gaps = 23/178 (12%)

Query: 6   GSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV- 63
           GS+   + +      L  S       D+  G+  L   GI+  N+KP N +    +    
Sbjct: 94  GSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQS 153

Query: 64  ---LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPE-----QWQPEVRGPISFETDSWGF 115
              L D G    L              GT  Y+ P+       + + +       D W  
Sbjct: 154 VYKLTDFGAARELE----DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSI 209

Query: 116 ACSIIEMLTGVQP----RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYD 169
             +     TG  P       R   E+   ++  +     PSG    V+    G  ++ 
Sbjct: 210 GVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK-----PSGAISGVQKAENGPIDWS 262

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 44.8 bits (106), Expect = 4e-05
 Identities = 24/116 (20%), Positives = 46/116 (39%), Gaps = 18/116 (15%)

Query: 31  DLAQGILQLHSKGILVLNLKPFNFILNEAD-------------RAVLGDVGI-PHLLLGI 76
            +A G+  LHS  I+  +LKP N +++ +              R ++ D G+   L  G 
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182

Query: 77  PLPSSDLPRRLGTPNYMAPEQ----WQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
               ++L    GT  + APE        + +  ++   D +   C    +L+  + 
Sbjct: 183 SSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 44.2 bits (105), Expect = 5e-05
 Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 11/139 (7%)

Query: 1   MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAI------DLAQGILQLHSKGILVLNLKPFN 53
           MK    GSV D +  +       S V   +       ++ +G+  LH  G +  ++K  N
Sbjct: 92  MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGN 151

Query: 54  FILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR--LGTPNYMAPEQWQPEVRGPISFETD 111
            +L E     + D G+   L      + +  R+  +GTP +MAPE  +        F+ D
Sbjct: 152 ILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQV--RGYDFKAD 209

Query: 112 SWGFACSIIEMLTGVQPRC 130
            W F  + IE+ TG  P  
Sbjct: 210 IWSFGITAIELATGAAPYH 228

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 44.7 bits (106), Expect = 5e-05
 Identities = 29/129 (22%), Positives = 48/129 (37%), Gaps = 15/129 (11%)

Query: 23  SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV---LGDVGIPHLLLGIPLP 79
              F     +   +  LH  GI+  +LKP N +L+  +      + D G       I   
Sbjct: 242 KLYFY---QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG----HSKILGE 294

Query: 80  SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII--EMLTGVQP-RCGRSVDE 136
           +S +    GTP Y+APE          +   D W  +  +I    L+G  P    R+   
Sbjct: 295 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCW--SLGVILFICLSGYPPFSEHRTQVS 352

Query: 137 IYDAVVRRQ 145
           + D +   +
Sbjct: 353 LKDQITSGK 361

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 44.3 bits (105), Expect = 6e-05
 Identities = 29/154 (18%), Positives = 52/154 (33%), Gaps = 22/154 (14%)

Query: 32  LAQGILQLHSKGILVLNLKPFNFILNEADRAV-LGDVGIPHLLLGIPLPSSDLPRRLGTP 90
           + + +   H+ G+L  ++K  N +++     + L D G   LL        D     GT 
Sbjct: 158 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-----GTR 212

Query: 91  NYMAPEQWQPEV-RGPISFETDSWGFACSII--EMLTGVQPRCGRSVDEIYDAVVRRQEI 147
            Y  PE  +     G        W  +  I+  +M+ G  P      +EI    V     
Sbjct: 213 VYSPPEWIRYHRYHGR---SAAVW--SLGILLYDMVCGDIPFEHD--EEIIRGQVF---- 261

Query: 148 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
                 +    ++++  C       RP   +I  
Sbjct: 262 --FRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 293

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 44.1 bits (104), Expect = 8e-05
 Identities = 30/156 (19%), Positives = 50/156 (32%), Gaps = 22/156 (14%)

Query: 27  RYAIDLAQGILQLHSKGILVLNLKPFNFIL--NEADRAV--LGDVGIPHLLLGIPLPSSD 82
               D+  G+  L   GI+  N+KP N +    E  ++V  L D G              
Sbjct: 116 IVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG----AARELEDDEQ 171

Query: 83  LPRRLGTPNYMAPE-----QWQPEVRGPISFETDSWGFACSIIEMLTGVQP----RCGRS 133
                GT  Y+ P+       + + +       D W    +     TG  P       R 
Sbjct: 172 FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR 231

Query: 134 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYD 169
             E+   ++  +     PSG    V+    G  ++ 
Sbjct: 232 NKEVMYKIITGK-----PSGAISGVQKAENGPIDWS 262

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 43.3 bits (103), Expect = 1e-04
 Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 23/128 (17%)

Query: 27  RYAIDLAQGILQ----LHSKGILVLNLKPFNFIL-NEADRA--VLGDVGIPHLLLGIPLP 79
           + A  + Q +L     LH  GI+  +LKP N +     + +  ++ D G     L     
Sbjct: 106 KDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFG-----LSKMEQ 160

Query: 80  SSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIE--MLTGVQPRCGRSVD 135
           +  +    GTP Y+A     PEV  + P S   D W  +  +I   +L G  P    +  
Sbjct: 161 NGIMSTACGTPGYVA-----PEVLAQKPYSKAVDCW--SIGVITYILLCGYPPFYEETES 213

Query: 136 EIYDAVVR 143
           ++++ +  
Sbjct: 214 KLFEKIKE 221

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 43.5 bits (103), Expect = 1e-04
 Identities = 33/126 (26%), Positives = 50/126 (39%), Gaps = 14/126 (11%)

Query: 23  SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSD 82
            ++ R    L + +  LH+  I+  +LKP N +L++  +  L D G          P   
Sbjct: 203 RSIMR---SLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFG----FSCHLEPGEK 255

Query: 83  LPRRLGTPNYMAPE---QWQPEVRGPISFETDSWGFACSIIE--MLTGVQPRCGRSVDEI 137
           L    GTP Y+APE       E       E D W  AC +I   +L G  P   R    +
Sbjct: 256 LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLW--ACGVILFTLLAGSPPFWHRRQILM 313

Query: 138 YDAVVR 143
              ++ 
Sbjct: 314 LRMIME 319

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 38/167 (22%), Positives = 61/167 (36%), Gaps = 43/167 (25%)

Query: 34  QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR---LGTP 90
           Q +  LH++G++  ++K  + +L    R  L D G    +      S D+P+R   +GTP
Sbjct: 152 QALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQI------SKDVPKRKSLVGTP 205

Query: 91  NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP- 149
            +MAPE      R   + E D W     +IEM+ G  P                    P 
Sbjct: 206 YWMAPEVIS---RSLYATEVDIWSLGIMVIEMVDGEPPYF---------------SDSPV 247

Query: 150 -----IPSGLPPAVENV----------LLGCFEYDLRSRPLMTDILR 181
                +    PP ++N           L      D + R    ++L 
Sbjct: 248 QAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLD 294

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 37/169 (21%), Positives = 65/169 (38%), Gaps = 14/169 (8%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG 75
             G++           +   +   H K I+  +LK  N +L+      + D G       
Sbjct: 107 AHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFG----FSN 162

Query: 76  IPLPSSDLPRRLGTPNYMAPEQWQ-PEVRGPISFETDSWGFACSII--EMLTGVQPRCGR 132
                  L    G P Y APE +Q  +  GP   E D W  +  +I   +++G  P  G+
Sbjct: 163 EFTVGGKLDAFCGAPPYAAPELFQGKKYDGP---EVDVW--SLGVILYTLVSGSLPFDGQ 217

Query: 133 SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
           ++ E+ + V+R      IP  +    EN+L      +   R  +  I++
Sbjct: 218 NLKELRERVLR--GKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 30/182 (16%), Positives = 59/182 (32%), Gaps = 24/182 (13%)

Query: 11  RMAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVGI 69
            + +     + +  +      +      +H+ K I   ++KP N ++++  R  L D G 
Sbjct: 139 VLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFG- 197

Query: 70  PHLLLGIPLPSSDLPRRLGTPNYMAPE--QWQPEVRGPISFETDSWGFACSII--EMLTG 125
                   +    +    GT  +M PE    +    G    + D W  +  I    M   
Sbjct: 198 ----ESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGA---KVDIW--SLGICLYVMFYN 248

Query: 126 VQP-RCGRSVDEIYDAVVRRQ-EIPPIPSGLPPAVENVLLGCFEY-------DLRSRPLM 176
           V P     S+ E+++ +  +  E P   +     + N    C          D     L 
Sbjct: 249 VVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLR 308

Query: 177 TD 178
            +
Sbjct: 309 KN 310

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 30/134 (22%), Positives = 53/134 (39%), Gaps = 19/134 (14%)

Query: 4   YEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRA 62
             G+  +++ +   G +    + +  + + + +  L  K G++  ++KP N +L+E  + 
Sbjct: 105 LMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQI 164

Query: 63  VLGDVGIPHLLLGIPLPSSDLPRRL------GTPNYMAPEQWQPEVR--GPISFETDSWG 114
            L D GI          S  L          G   YMAPE+  P            D W 
Sbjct: 165 KLCDFGI----------SGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWS 214

Query: 115 FACSIIEMLTGVQP 128
              S++E+ TG  P
Sbjct: 215 LGISLVELATGQFP 228

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 42.5 bits (101), Expect = 2e-04
 Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 21/128 (16%)

Query: 23  SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL-NEADRAVL--GDVGIPHLLLGIPLP 79
           S+  +    + + I   HS GI+  NLKP N +L ++A  A +   D G+   +      
Sbjct: 108 SHCIQ---QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN----D 160

Query: 80  SSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIE--MLTGVQPRCGRSVD 135
           S       GTP Y++     PEV  + P S   D W  AC +I   +L G  P       
Sbjct: 161 SEAWHGFAGTPGYLS-----PEVLKKDPYSKPVDIW--ACGVILYILLVGYPPFWDEDQH 213

Query: 136 EIYDAVVR 143
            +Y  +  
Sbjct: 214 RLYAQIKA 221

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 19/127 (14%)

Query: 27  RYAIDLAQGILQ----LHSKGILVLNLKPFNFIL-NEADRA--VLGDVGIPHLLLGIPLP 79
           R A D  + IL+    LH  GI+  +LKP N +    A  A   + D G+  ++      
Sbjct: 148 RDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE----H 203

Query: 80  SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIE--MLTGVQPRCGRSVD-E 136
              +    GTP Y APE  +         E D W  +  II   +L G +P      D  
Sbjct: 204 QVLMKTVCGTPGYCAPEILR---GCAYGPEVDMW--SVGIITYILLCGFEPFYDERGDQF 258

Query: 137 IYDAVVR 143
           ++  ++ 
Sbjct: 259 MFRRILN 265

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 41.9 bits (99), Expect = 3e-04
 Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 21/131 (16%)

Query: 6   GSVGDRMAQLKGGKLS---LSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRA 62
           GS  D +   + G L    ++ + R   ++ +G+  LHS+  +  ++K  N +L+E    
Sbjct: 105 GSALDLL---EPGPLDETQIATILR---EILKGLDYLHSEKKIHRDIKAANVLLSEHGEV 158

Query: 63  VLGDVGIPHLLLGIPLPSSDLPRR---LGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
            L D G+   L      +    +R   +GTP +MAPE  +   +     + D W    + 
Sbjct: 159 KLADFGVAGQL------TDTQIKRNTFVGTPFWMAPEVIK---QSAYDSKADIWSLGITA 209

Query: 120 IEMLTGVQPRC 130
           IE+  G  P  
Sbjct: 210 IELARGEPPHS 220

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 41.5 bits (98), Expect = 4e-04
 Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 16/117 (13%)

Query: 23  SNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL-NEADRAVL--GD----VGIPHLLLG 75
           S V +   D+A  +  LH+KGI   +LKP N +  +    + +   D     GI      
Sbjct: 114 SVVVQ---DVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC 170

Query: 76  IPLPSSDLPRRLGTPNYMAPE--QWQPEVRGPISFETDSWGFACSIIE--MLTGVQP 128
            P+ + +L    G+  YMAPE  +   E         D W  +  +I   +L+G  P
Sbjct: 171 SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLW--SLGVILYILLSGYPP 225

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 41.1 bits (97), Expect = 5e-04
 Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 5/93 (5%)

Query: 93  MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 151
           M PE +   + G  + +TD+W F   + E+ + G  P   +S  E+ + V     + P P
Sbjct: 212 MPPEAF---MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP-P 267

Query: 152 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
              P  V  ++  C+++    RP    IL   +
Sbjct: 268 KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 40.8 bits (96), Expect = 6e-04
 Identities = 36/167 (21%), Positives = 57/167 (34%), Gaps = 43/167 (25%)

Query: 34  QGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR---LGTP 90
           Q +  LHS  ++  ++K  N +L       L D G    +      + +  +R   +GTP
Sbjct: 127 QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI------TPEQSKRSTMVGTP 180

Query: 91  NYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP- 149
            +MAPE      R     + D W      IEM+ G  P                    P 
Sbjct: 181 YWMAPEVVT---RKAYGPKVDIWSLGIMAIEMIEGEPPYL---------------NENPL 222

Query: 150 -----IPSGLPPAVENV----------LLGCFEYDLRSRPLMTDILR 181
                I +   P ++N           L  C E D+  R    ++L+
Sbjct: 223 RALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 41.2 bits (97), Expect = 6e-04
 Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 5/93 (5%)

Query: 93  MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 151
           M PE +   + G  + +TD+W F   + E+ + G  P   +S  E+ + V     + P P
Sbjct: 253 MPPEAF---MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDP-P 308

Query: 152 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
              P  V  ++  C+++    RP    IL   +
Sbjct: 309 KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 40.7 bits (96), Expect = 7e-04
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 2/78 (2%)

Query: 109 ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFE 167
           E+D W F   + E+ T G QP    S  E  D + + +E+   P   PP V  ++ GC++
Sbjct: 240 ESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELER-PRACPPEVYAIMRGCWQ 298

Query: 168 YDLRSRPLMTDILRVFKS 185
            + + R  + D+    ++
Sbjct: 299 REPQQRHSIKDVHARLQA 316

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 40.3 bits (95), Expect = 9e-04
 Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 2/81 (2%)

Query: 109 ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFE 167
           ++D W +   + E+ + G+QP CG S  ++ + +  RQ +P  P   P  V  +++ C+ 
Sbjct: 210 DSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPC-PDDCPAWVYALMIECWN 268

Query: 168 YDLRSRPLMTDILRVFKSSQN 188
                RP   DI    ++  N
Sbjct: 269 EFPSRRPRFKDIHSRLRAWGN 289

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	503
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.98
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.98
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.98
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.98
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.98
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.97
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.97
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.97
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.97
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.97
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.97
3niz_A	311	Rhodanese family protein; structural genomics, str	99.97
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.97
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.97
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.97
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.97
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.97
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.97
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.97
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.97
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.97
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.97
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.97
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.97
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.97
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.97
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.97
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.97
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.97
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.97
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.97
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.97
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.97
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.97
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.97
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.97
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.97
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.97
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.97
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.97
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.97
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.97
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.97
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.97
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.97
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.97
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.97
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.97
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.97
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.97
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.97
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.97
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.97
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.97
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.97
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.97
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.97
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.97
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.97
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.97
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.97
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.97
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.97
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.97
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.97
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.97
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.97
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.97
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.97
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.97
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.97
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.97
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.97
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.97
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.97
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.97
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.97
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.97
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.97
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.97
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.97
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.97
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.97
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.97
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.97
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.97
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.97
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.97
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.97
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.97
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.97
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.97
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.97
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.97
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.97
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.97
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.97
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.97
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.97
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.97
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.97
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.97
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.97
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.96
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.96
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.96
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.96
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.96
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.96
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.96
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.96
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.96
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.96
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.96
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.96
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.96
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.96
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.96
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.96
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.96
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.96
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.96
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.96
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.96
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.96
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.96
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.96
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.96
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.96
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.96
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.96
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.96
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.96
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.96
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.96
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.96
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.96
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.96
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.96
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.96
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.96
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.96
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.96
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.96
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.96
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.96
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.96
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.96
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.96
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.96
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.96
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.96
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.96
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.96
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.96
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.96
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.96
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.96
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.96
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.96
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.96
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.96
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.96
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.96
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.96
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.96
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.96
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.96
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.96
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.96
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.96
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.96
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.96
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.96
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.96
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.96
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.96
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.96
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.96
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.96
3bhy_A	283	Death-associated protein kinase 3; death associate	99.96
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.96
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.96
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.96
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.96
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.96
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.96
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.96
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.96
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.96
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.96
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.96
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.96
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.96
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.96
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.96
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.96
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.96
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.96
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.96
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.96
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.95
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.95
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.95
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.95
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.95
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.95
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.95
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.95
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.95
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.95
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.95
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.95
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.95
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.94
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.93
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.92
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.9
3uqc_A	286	Probable conserved transmembrane protein; structur	99.9
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.9
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.83
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.52
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.21
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.0
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.6
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	97.72
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	97.71
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	97.6
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	97.43
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	96.7
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	96.7
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	95.88
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	94.63
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	94.54
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	91.79
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	90.05
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	87.51
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	86.77
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	86.37
3ats_A	357	Putative uncharacterized protein; hypothetical pro	85.13
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	82.1
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	82.07
2zzd_A	126	Thiocyanate hydrolase subunit alpha; scnase, cobal	81.51
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	81.11
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	80.54

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=4.6e-41  Score=341.06  Aligned_cols=194  Identities=27%  Similarity=0.371  Sum_probs=170.7

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+ |+|.+++.  +.+.+++.++..++.||+.||+|||++||+||||||+|||++.++++||+|||+|+.....   
T Consensus       105 mEy~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~---  179 (304)
T 3ubd_A          105 LDFLRGGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH---  179 (304)
T ss_dssp             ECCCTTCEEHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-------
T ss_pred             EEcCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCC---
Confidence            89999 59999997  4567999999999999999999999999999999999999999999999999999765331   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      .......+||+.|||||++.+.   .|+.++|||||||++|||+||+.||.+.+..+++..+...  .+.+|..++++++
T Consensus       180 ~~~~~~~~GT~~YmAPE~~~~~---~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~--~~~~p~~~s~~~~  254 (304)
T 3ubd_A          180 EKKAYSFCGTVEYMAPEVVNRR---GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA--KLGMPQFLSPEAQ  254 (304)
T ss_dssp             -CCCCSCCCCGGGCCHHHHHTS---CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCTTSCHHHH
T ss_pred             CccccccccCcccCCHHHhccC---CCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcC--CCCCCCcCCHHHH
Confidence            2334567899999999999854   6899999999999999999999999999999998888764  4567888999999


Q ss_pred             HHHHHhhhcCCCCCCC-----HHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRPL-----MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSS  210 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS-----~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~  210 (503)
                      +||.+||+.||++|||     ++|+++      |+|+.+.+|..+..+..++|..|
T Consensus       255 ~li~~~L~~dP~~R~ta~~~~~~eil~------Hp~f~~idw~~l~~~~~~pP~~P  304 (304)
T 3ubd_A          255 SLLRMLFKRNPANRLGAGPDGVEEIKR------HSFFSTIDWNKLYRREIHPPFKP  304 (304)
T ss_dssp             HHHHHHTCSSGGGSTTCSTTTHHHHHT------SGGGTTCCHHHHHTTCSCCSSCC
T ss_pred             HHHHHHcccCHHHCCCCCcCCHHHHHc------CccccCCCHHHHHhCCCCcCcCC
Confidence            9999999999999998     467776      99999999999988888888765

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=9.2e-41  Score=339.66  Aligned_cols=194  Identities=18%  Similarity=0.305  Sum_probs=170.1

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+| +|.+++.  +.+.+++.++..|+.||+.||+|||++||+||||||+|||++.++++||+|||+|+...... .
T Consensus       111 mEy~~gG~L~~~i~--~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~-~  187 (311)
T 4aw0_A          111 LSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-K  187 (311)
T ss_dssp             ECCCTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT-T
T ss_pred             EecCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC-C
Confidence            899995 9999997  45679999999999999999999999999999999999999999999999999998764321 1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      .....+.+||+.|||||++.+.   .|+.++|||||||++|+|++|+.||.+.+..+++.++...  ...+|..++++++
T Consensus       188 ~~~~~~~~GTp~YmAPEvl~~~---~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~--~~~~p~~~s~~~~  262 (311)
T 4aw0_A          188 QARANSFVGTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL--EYDFPEKFFPKAR  262 (311)
T ss_dssp             CCCBCCCCSCGGGCCHHHHHHS---CBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT--CCCCCTTCCHHHH
T ss_pred             cccccCcccCcccCCHHHHcCC---CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCCCCcccCHHHH
Confidence            2234567999999999999854   6899999999999999999999999999999999888764  3567888999999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCCCCCc
Q 010713          160 NVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGHGSR  202 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~~~~~  202 (503)
                      +||.+||+.||++|||+.|++..-.-..|+||.+.+|..+.++
T Consensus       263 dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~l~~~  305 (311)
T 4aw0_A          263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQ  305 (311)
T ss_dssp             HHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTGGGS
T ss_pred             HHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCCHHHhcCC
Confidence            9999999999999999999765444446999999999998654

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=3e-39  Score=328.16  Aligned_cols=189  Identities=24%  Similarity=0.365  Sum_probs=156.2

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+ |||.+++.. ....+++.+++.|+.||+.||+|||+++|+||||||+|||++.++.+||+|||+|+...... .
T Consensus       110 mEy~~gGsL~~~l~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~-~  187 (307)
T 3omv_A          110 TQWCEGSSLYKHLHV-QETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS-G  187 (307)
T ss_dssp             EECCSSCBHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred             EEcCCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCC-c
Confidence            89999 599999974 45679999999999999999999999999999999999999999999999999997654321 1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-CCC---CCCCCCc
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-EIP---PIPSGLP  155 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~-~~~---~~~~~~s  155 (503)
                      .......+||+.|||||++.+...++|+.++|||||||+||||+||+.||.+.+.......+.... ..+   ..+..++
T Consensus       188 ~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  267 (307)
T 3omv_A          188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCP  267 (307)
T ss_dssp             ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSC
T ss_pred             ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccch
Confidence            223346689999999999976545679999999999999999999999999876665555544433 222   3457889


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcC
Q 010713          156 PAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVH  191 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~  191 (503)
                      +++.+||.+||+.||++|||+.|+++.|+.+++++.
T Consensus       268 ~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp  303 (307)
T 3omv_A          268 KAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP  303 (307)
T ss_dssp             HHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence            999999999999999999999999999999988764

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=1.1e-38  Score=319.30  Aligned_cols=176  Identities=19%  Similarity=0.324  Sum_probs=147.1

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      ||||+|+|.+++.  +.+.+++.++..++.||+.||+|||++||+||||||+|||++.++++||+|||+|+....    .
T Consensus        92 mEy~~g~L~~~l~--~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~----~  165 (275)
T 3hyh_A           92 IEYAGNELFDYIV--QRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD----G  165 (275)
T ss_dssp             EECCCEEHHHHHH--HSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC----------
T ss_pred             EeCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCC----C
Confidence            8999999999997  457899999999999999999999999999999999999999999999999999976543    2


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHHH
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVEN  160 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~~  160 (503)
                      ......+||+.|||||++.+..  .++.++|||||||++|+|+||+.||.+.+..+++..+...  ...++..+++++++
T Consensus       166 ~~~~~~~GT~~Y~APE~~~~~~--y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~  241 (275)
T 3hyh_A          166 NFLKTSCGSPNYAAPEVISGKL--YAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG--VYTLPKFLSPGAAG  241 (275)
T ss_dssp             ---------CTTSCHHHHSSSS--CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT--CCCCCTTSCHHHHH
T ss_pred             CccCCeeECcccCChhhhcCCC--CCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHH
Confidence            2334678999999999998642  2468999999999999999999999999988888887664  45677889999999


Q ss_pred             HHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          161 VLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       161 LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      ||.+||+.||++|||+.|+++      |+|+.
T Consensus       242 li~~~L~~dP~~R~s~~eil~------hpw~k  267 (275)
T 3hyh_A          242 LIKRMLIVNPLNRISIHEIMQ------DDWFK  267 (275)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHH------CHHHH
T ss_pred             HHHHHccCChhHCcCHHHHHc------Ccccc
Confidence            999999999999999999998      77664

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=2.4e-38  Score=325.20  Aligned_cols=183  Identities=23%  Similarity=0.294  Sum_probs=153.7

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC-cEEEEecCCcccccCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD-RAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~-~vKL~DFGla~~~~~~~~   78 (503)
                      ||||+ |+|.+++..  .+.+++.+++.|+.||+.||+|||++||+||||||+|||++.++ ++||+|||+|+.......
T Consensus       129 mEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~  206 (336)
T 4g3f_A          129 MELLEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL  206 (336)
T ss_dssp             ECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-----
T ss_pred             EeccCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCc
Confidence            89999 599999974  46799999999999999999999999999999999999999887 699999999987643221


Q ss_pred             CC--CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC-CCCCCCCc
Q 010713           79 PS--SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-PPIPSGLP  155 (503)
Q Consensus        79 ~~--~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~-~~~~~~~s  155 (503)
                      ..  ......+||+.|||||++.+.   .|+.++|||||||++|||+||+.||.+.+..++...+...... ..++..++
T Consensus       207 ~~~~~~~~~~~GT~~YmAPE~~~~~---~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s  283 (336)
T 4g3f_A          207 GKSLLTGDYIPGTETHMAPEVVMGK---PCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCA  283 (336)
T ss_dssp             -------CCCCCCGGGCCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSC
T ss_pred             ccceecCCccccCccccCHHHHCCC---CCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCC
Confidence            11  122346899999999999864   6899999999999999999999999988777777777664432 24678899


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          156 PAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      +.+.+||.+||+.||.+|||+.|+++.|.....
T Consensus       284 ~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~  316 (336)
T 4g3f_A          284 PLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ  316 (336)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence            999999999999999999999999998776543

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=3.6e-38  Score=325.02  Aligned_cols=178  Identities=20%  Similarity=0.324  Sum_probs=155.6

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+| +|.+++.+   +.+++.++..|+.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.....   
T Consensus       150 mEy~~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~---  223 (346)
T 4fih_A          150 MEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE---  223 (346)
T ss_dssp             ECCCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSS---
T ss_pred             EeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCC---
Confidence            899995 99998853   56999999999999999999999999999999999999999999999999999876431   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccC-CCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~-~~~~~~~~s~~l  158 (503)
                      .......+||+.|||||++.+.   .|+.++|||||||++|||++|+.||.+.+..+.+..+..... ....+..+++++
T Consensus       224 ~~~~~~~~GTp~YmAPEvl~~~---~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~  300 (346)
T 4fih_A          224 VPRRKSLVGTPYWMAPELISRL---PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSL  300 (346)
T ss_dssp             SCCBCCCCSCGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHH
T ss_pred             CCcccccccCcCcCCHHHHCCC---CCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHH
Confidence            2234567999999999999854   689999999999999999999999999998888887765432 223446789999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      ++||.+||+.||++|||+.|+++      |+|+..
T Consensus       301 ~dli~~~L~~dP~~R~ta~e~l~------Hp~~~~  329 (346)
T 4fih_A          301 KGFLDRLLVRDPAQRATAAELLK------HPFLAK  329 (346)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHTT------CGGGGG
T ss_pred             HHHHHHHcCCChhHCcCHHHHhc------CHhhcC
Confidence            99999999999999999999988      888764

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.2e-38  Score=329.03  Aligned_cols=174  Identities=22%  Similarity=0.429  Sum_probs=154.7

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+ |+|.+++...+...+++.+++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.....   
T Consensus       102 mEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~---  178 (350)
T 4b9d_A          102 MDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST---  178 (350)
T ss_dssp             EECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH---
T ss_pred             EeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCC---
Confidence            89998 59999998656677899999999999999999999999999999999999999999999999999765321   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      .......+||+.|||||++.+.   .|+.++|||||||++|||+||+.||.+.+..+++.++.... .++.+..++++++
T Consensus       179 ~~~~~~~~GT~~YmAPE~l~~~---~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~-~~~~~~~~s~~~~  254 (350)
T 4b9d_A          179 VELARACIGTPYYLSPEICENK---PYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGS-FPPVSLHYSYDLR  254 (350)
T ss_dssp             HHHHHHHHSCCTTCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTC-CCCCCTTSCHHHH
T ss_pred             cccccccCCCccccCHHHHCCC---CCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCC-CCCCCccCCHHHH
Confidence            1112346799999999999864   68999999999999999999999999999999888887654 4567788999999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 010713          160 NVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +||.+||+.||++|||+.|+++
T Consensus       255 ~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          255 SLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHccCChhHCcCHHHHhc
Confidence            9999999999999999999987

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=7.8e-38  Score=315.37  Aligned_cols=176  Identities=20%  Similarity=0.366  Sum_probs=149.4

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecccCCCcEEEcc-CCcEEEEecCCcccccCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG--ILVLNLKPFNFILNE-ADRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~g--IvHrDLKP~NILld~-~~~vKL~DFGla~~~~~~   76 (503)
                      ||||+ |+|.+++.  +.+.+++.++..|+.||+.||+|||++|  |+||||||+|||++. ++.+||+|||+|+.... 
T Consensus       108 mEy~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~-  184 (290)
T 3fpq_A          108 TELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA-  184 (290)
T ss_dssp             EECCCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT-
T ss_pred             EeCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC-
Confidence            79999 59999997  4567999999999999999999999999  999999999999984 78999999999976432 


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHhccCCCCCCCCCc
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV-DEIYDAVVRRQEIPPIPSGLP  155 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-~e~~~~i~~~~~~~~~~~~~s  155 (503)
                          ......+||+.|||||++.+    .|+.++|||||||++|||+||+.||.+... ..++..+.....++.++..++
T Consensus       185 ----~~~~~~~GTp~YmAPE~~~~----~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~  256 (290)
T 3fpq_A          185 ----SFAKAVIGTPEFMAPEMYEE----KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAI  256 (290)
T ss_dssp             ----TSBEESCSSCCCCCGGGGGT----CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCC
T ss_pred             ----CccCCcccCccccCHHHcCC----CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCC
Confidence                23346789999999999863    589999999999999999999999987544 445555544434445667789


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          156 PAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      +++++||.+||+.||++|||+.|+++      |+|+..
T Consensus       257 ~~~~~li~~~L~~dP~~R~s~~e~l~------Hp~~~~  288 (290)
T 3fpq_A          257 PEVKEIIEGCIRQNKDERYSIKDLLN------HAFFQE  288 (290)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHT------SGGGC-
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhc------CccccC
Confidence            99999999999999999999999998      888754

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=2.5e-37  Score=326.46  Aligned_cols=178  Identities=20%  Similarity=0.320  Sum_probs=156.1

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+| +|.+++.   .+.+++.++..|+.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.....   
T Consensus       227 mEy~~gG~L~~~i~---~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~---  300 (423)
T 4fie_A          227 MEFLEGGALTDIVT---HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE---  300 (423)
T ss_dssp             EECCTTEEHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSS---
T ss_pred             EeCCCCCcHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCC---
Confidence            899995 9999885   356999999999999999999999999999999999999999999999999999876431   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccC-CCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~-~~~~~~~~s~~l  158 (503)
                      .......+||+.|||||++.+.   .|+.++|||||||++|||++|+.||.+.+..+.+..+..... ....+..+++++
T Consensus       301 ~~~~~~~~GTp~YmAPEvl~~~---~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~  377 (423)
T 4fie_A          301 VPRRKSLVGTPYWMAPELISRL---PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSL  377 (423)
T ss_dssp             CCCBCCCEECTTTCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHH
T ss_pred             CccccccccCcCcCCHHHHCCC---CCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHH
Confidence            2234567899999999999854   689999999999999999999999999998888887765432 233456799999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      ++||.+||+.||++|||+.|+++      |+|+..
T Consensus       378 ~dli~~~L~~dP~~R~ta~ell~------Hp~~~~  406 (423)
T 4fie_A          378 KGFLDRLLVRDPAQRATAAELLK------HPFLAK  406 (423)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHTT------CGGGGG
T ss_pred             HHHHHHHcCCChhHCcCHHHHhc------CHHhcC
Confidence            99999999999999999999988      888764

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=4.3e-37  Score=315.15  Aligned_cols=183  Identities=20%  Similarity=0.344  Sum_probs=152.5

Q ss_pred             CcCCC-CCHHHHHHhhc-------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEe
Q 010713            1 MKFYE-GSVGDRMAQLK-------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGD   66 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~-------------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~D   66 (503)
                      ||||+ |+|.+++....             .+++++.+++.|+.||+.||+|||+++|+||||||+|||++.++.+||+|
T Consensus       122 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~D  201 (329)
T 4aoj_A          122 FEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGD  201 (329)
T ss_dssp             EECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECC
T ss_pred             EEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcc
Confidence            79999 69999997532             25699999999999999999999999999999999999999999999999


Q ss_pred             cCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc
Q 010713           67 VGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQ  145 (503)
Q Consensus        67 FGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~  145 (503)
                      ||+++....... ........||+.|||||++.+.   .++.++|||||||+||||+| |+.||.+.+..+....+... 
T Consensus       202 FGla~~~~~~~~-~~~~~~~~gt~~ymAPE~~~~~---~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g-  276 (329)
T 4aoj_A          202 FGMSRDIYSTDY-YRVGGRTMLPIRWMPPESILYR---KFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQG-  276 (329)
T ss_dssp             CC-----------------CCCCGGGCCHHHHTTC---CCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHT-
T ss_pred             cccceeccCCCc-ceecCcccccccccChhhhcCC---CCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-
Confidence            999986543221 1222356799999999999854   78999999999999999999 89999999988888877654 


Q ss_pred             CCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          146 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       146 ~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      ..++.|..+++++.+||.+||+.||++|||+.||++.|+.+..
T Consensus       277 ~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~  319 (329)
T 4aoj_A          277 RELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ  319 (329)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             CCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence            4567888999999999999999999999999999999998764

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=1.5e-37  Score=314.59  Aligned_cols=183  Identities=19%  Similarity=0.338  Sum_probs=159.0

Q ss_pred             CcCCC-CCHHHHHHhh-----------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecC
Q 010713            1 MKFYE-GSVGDRMAQL-----------KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG   68 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~-----------~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFG   68 (503)
                      ||||+ |||.++|...           ....|++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||
T Consensus        94 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFG  173 (299)
T 4asz_A           94 FEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFG  173 (299)
T ss_dssp             EECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCS
T ss_pred             EEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcc
Confidence            79998 6999999753           23579999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCC
Q 010713           69 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEI  147 (503)
Q Consensus        69 la~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~  147 (503)
                      +|+....... ........||+.|||||++.+.   .|+.++|||||||++|||+| |+.||.+.+..++...+... ..
T Consensus       174 la~~~~~~~~-~~~~~~~~gt~~ymAPE~~~~~---~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~-~~  248 (299)
T 4asz_A          174 MSRDVYSTDY-YRVGGHTMLPIRWMPPESIMYR---KFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQG-RV  248 (299)
T ss_dssp             CHHHHTGGGC-EEETTTEEECGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHT-CC
T ss_pred             cceecCCCCc-eeecCceecChhhcCHHHHcCC---CCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-CC
Confidence            9976533211 1122345689999999999844   79999999999999999999 89999999998888877654 45


Q ss_pred             CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          148 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       148 ~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      ++.|..+++++.+||.+||+.||++|||+.++.+.|+++..
T Consensus       249 ~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~  289 (299)
T 4asz_A          249 LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK  289 (299)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            66788999999999999999999999999999999988754

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=3.3e-37  Score=313.26  Aligned_cols=182  Identities=20%  Similarity=0.382  Sum_probs=158.2

Q ss_pred             CcCCC-CCHHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEE
Q 010713            1 MKFYE-GSVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG   65 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~--------------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~   65 (503)
                      ||||+ |||.++|....              ...+++.++++++.||+.||+|||+++|+||||||+|||+++++.+||+
T Consensus       108 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~  187 (308)
T 4gt4_A          108 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKIS  187 (308)
T ss_dssp             EECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEEC
T ss_pred             EEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEEC
Confidence            79998 69999996431              2469999999999999999999999999999999999999999999999


Q ss_pred             ecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc
Q 010713           66 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR  144 (503)
Q Consensus        66 DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~  144 (503)
                      |||+++....... ........||+.|||||++.+   +.|+.++|||||||+||||+| |..||.+.+..++...+...
T Consensus       188 DFGlar~~~~~~~-~~~~~~~~gt~~ymAPE~l~~---~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~  263 (308)
T 4gt4_A          188 DLGLFREVYAADY-YKLLGNSLLPIRWMAPEAIMY---GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNR  263 (308)
T ss_dssp             CSCCBCGGGGGGC-BCSSSSSCBCGGGCCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTT
T ss_pred             CcccceeccCCCc-eeEecccccCCcccCHHHHhC---CCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence            9999986543221 223345689999999999974   479999999999999999998 89999999998888877654


Q ss_pred             cCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhc
Q 010713          145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQ  187 (503)
Q Consensus       145 ~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~  187 (503)
                       ..++.|..+++.+.+||.+||+.||++|||+.||++.|+++.
T Consensus       264 -~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~  305 (308)
T 4gt4_A          264 -QVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG  305 (308)
T ss_dssp             -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             -CCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence             456678899999999999999999999999999999998653

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=3.4e-37  Score=318.81  Aligned_cols=184  Identities=19%  Similarity=0.351  Sum_probs=158.3

Q ss_pred             CcCCC-CCHHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEE
Q 010713            1 MKFYE-GSVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG   65 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~--------------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~   65 (503)
                      ||||+ |+|.++|....              ...+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+
T Consensus       148 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~  227 (353)
T 4ase_A          148 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC  227 (353)
T ss_dssp             EECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEEC
T ss_pred             EEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEEC
Confidence            79999 59999997532              3458999999999999999999999999999999999999999999999


Q ss_pred             ecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc
Q 010713           66 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR  144 (503)
Q Consensus        66 DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~  144 (503)
                      |||+|+...... .........||+.|||||++.+.   .|+.++|||||||+||||+| |..||.+.+..+.+......
T Consensus       228 DFGlar~~~~~~-~~~~~~~~~gt~~ymAPE~l~~~---~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~  303 (353)
T 4ase_A          228 DFGLARDIYKDP-DYVRKGDARLPLKWMAPETIFDR---VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE  303 (353)
T ss_dssp             CCGGGSCTTTCT-TSEEETTEEECGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHH
T ss_pred             cchhhhhcccCC-CceeeccccccccccCHHHHhcC---CCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHc
Confidence            999998654321 11122356789999999999844   79999999999999999998 99999987766666566666


Q ss_pred             cCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       145 ~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      ...++.|..+++++.+||.+||+.||++|||+.+|++.|+.+..
T Consensus       304 g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq  347 (353)
T 4ase_A          304 GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  347 (353)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence            67778889999999999999999999999999999999988753

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=2.8e-36  Score=333.40  Aligned_cols=196  Identities=19%  Similarity=0.329  Sum_probs=169.8

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+ |+|.++|.  +.+.+++.++..|+.||+.||+|||++||+||||||+|||++.+|++||+|||+|+....    
T Consensus       271 mEy~~GGdL~~~l~--~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~----  344 (689)
T 3v5w_A          271 LDLMNGGDLHYHLS--QHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK----  344 (689)
T ss_dssp             ECCCCSCBHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS----
T ss_pred             EecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCC----
Confidence            89999 59999997  457799999999999999999999999999999999999999999999999999987643    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHhccCCCCCCCCCcH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS---VDEIYDAVVRRQEIPPIPSGLPP  156 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~---~~e~~~~i~~~~~~~~~~~~~s~  156 (503)
                       ....+.+||+.|||||++.+.  ..|+.++|+|||||++|||++|.+||.+.+   ..++...+..  ....+|..+++
T Consensus       345 -~~~~t~~GTp~YmAPEvl~~~--~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~--~~~~~p~~~S~  419 (689)
T 3v5w_A          345 -KKPHASVGTHGYMAPEVLQKG--VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT--MAVELPDSFSP  419 (689)
T ss_dssp             -CCCCSCCSCGGGCCHHHHSTT--CCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHH--CCCCCCTTSCH
T ss_pred             -CCCCCccCCcCccCHHHHhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcC--CCCCCCccCCH
Confidence             234567999999999999632  258999999999999999999999997643   3344444443  44567889999


Q ss_pred             HHHHHHHHhhhcCCCCCCC-----HHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCCc
Q 010713          157 AVENVLLGCFEYDLRSRPL-----MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGYT  213 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~RPS-----~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~~  213 (503)
                      ++++||.+||+.||.+|++     +.|+++      |+||.+++|..+..+..++|..|...
T Consensus       420 ~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~------HpfF~~idW~~l~~~~~~pP~~P~~~  475 (689)
T 3v5w_A          420 ELRSLLEGLLQRDVNRRLGCLGRGAQEVKE------SPFFRSLDWQMVFLQKYPPPLIPPRG  475 (689)
T ss_dssp             HHHHHHHHHTCSCGGGCTTCSSSTHHHHTT------SGGGTTCCHHHHHTTCSCCSCCCCTT
T ss_pred             HHHHHHHHHccCCHhHCCCCCCCCHHHHhc------CccccCCCHHHHHcCCCCcCccCCCC
Confidence            9999999999999999997     788887      99999999999998999999888643

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=8.4e-36  Score=313.07  Aligned_cols=185  Identities=21%  Similarity=0.270  Sum_probs=156.3

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCC-CC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP-LP   79 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~-~~   79 (503)
                      ||||+|+|.+++.  ..+.+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.+.... ..
T Consensus       138 mE~~~g~L~~~i~--~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~  215 (398)
T 4b99_A          138 LDLMESDLHQIIH--SSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEH  215 (398)
T ss_dssp             EECCSEEHHHHHT--SSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-------
T ss_pred             EeCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccCcccc
Confidence            8999999999996  56789999999999999999999999999999999999999999999999999998764322 12


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC----------
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP----------  149 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~----------  149 (503)
                      .......+||+.|||||++.+.  ..++.++||||+||++|||++|++||.+.+..+++..+......++          
T Consensus       216 ~~~~~~~~GT~~Y~APEv~~~~--~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~  293 (398)
T 4b99_A          216 QYFMTEYVATRWYRAPELMLSL--HEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAE  293 (398)
T ss_dssp             CCCCCSSCCCCTTCCHHHHTTC--SCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----
T ss_pred             ccccccceeChHhcCHHHhcCC--CCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhh
Confidence            2334567999999999998754  2478999999999999999999999999998888887765433221          


Q ss_pred             -------------------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCC
Q 010713          150 -------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGG  195 (503)
Q Consensus       150 -------------------~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~  195 (503)
                                         +...+++++.+||.+||..||.+|||+.|+++      |+|+....
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~------Hp~f~~~~  352 (398)
T 4b99_A          294 RVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR------HPFLAKYH  352 (398)
T ss_dssp             CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT------SGGGTTTC
T ss_pred             hhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc------CHhhCcCC
Confidence                               01357899999999999999999999999988      99987643

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=7.8e-36  Score=301.80  Aligned_cols=185  Identities=22%  Similarity=0.306  Sum_probs=134.4

Q ss_pred             CcCCC-CCHHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~-~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~   78 (503)
                      ||||+ |+|.+++..... ...+...++.++.||++||+|||++||+||||||+|||++.++.+||+|||+|+.......
T Consensus        94 mE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~  173 (299)
T 4g31_A           94 MQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEE  173 (299)
T ss_dssp             EECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC--------
T ss_pred             EecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccceecCCCcc
Confidence            79998 599999974321 2345677899999999999999999999999999999999999999999999987643221


Q ss_pred             CC---------CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhccCCC
Q 010713           79 PS---------SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD-EIYDAVVRRQEIP  148 (503)
Q Consensus        79 ~~---------~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-e~~~~i~~~~~~~  148 (503)
                      ..         ......+||+.|||||++.+.   .|+.++|||||||++|||++   ||.+.... .....+. ....+
T Consensus       174 ~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~---~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~~~-~~~~p  246 (299)
T 4g31_A          174 EQTVLTPMPAYARHTGQVGTKLYMSPEQIHGN---SYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVR-NLKFP  246 (299)
T ss_dssp             ------------------CCCTTSCHHHHTTC---CCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHH-TTCCC
T ss_pred             ccccccccccccccCCcccCccccCHHHHcCC---CCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHHHh-cCCCC
Confidence            11         122346899999999999854   68999999999999999996   77643222 2222222 22222


Q ss_pred             CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCC
Q 010713          149 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTG  198 (503)
Q Consensus       149 ~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~  198 (503)
                      +.....++.+.+||.+||+.||++|||+.|+++      |+|+.+.+|..
T Consensus       247 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~------h~~~~~~~~p~  290 (299)
T 4g31_A          247 PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE------NAVFEDLDFPG  290 (299)
T ss_dssp             HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT------SGGGCCC----
T ss_pred             CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc------CHhhCCCCCCC
Confidence            233445677889999999999999999999988      89998887743

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=2.6e-34  Score=297.96  Aligned_cols=181  Identities=21%  Similarity=0.291  Sum_probs=141.3

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC-CcEEEEecCCcccccCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA-DRAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~-~~vKL~DFGla~~~~~~~~   78 (503)
                      ||||+ |+|.+++.     .+++.++..++.||+.||+|||++||+||||||+|||++.+ +.+||+|||+|+.......
T Consensus        99 mE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~  173 (361)
T 4f9c_A           99 MPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI  173 (361)
T ss_dssp             EECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSC
T ss_pred             EeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccc
Confidence            89998 59999883     49999999999999999999999999999999999999877 7999999999976533210


Q ss_pred             -------------------------CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCC-C
Q 010713           79 -------------------------PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-R  132 (503)
Q Consensus        79 -------------------------~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~-~  132 (503)
                                               ........+||+.|+|||++.+.  ..|+.++||||+||++|+|++|+.||.. .
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~y~~~~DiWSlG~il~ell~G~~Pf~~~~  251 (361)
T 4f9c_A          174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKC--PNQTTAIDMWSAGVIFLSLLSGRYPFYKAS  251 (361)
T ss_dssp             GGGGGC--------------------------CCCCGGGCCHHHHTTC--SCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred             cccccccccccccccccccccccccccccccccccCccccCHHHHcCC--CCCCCccchhhhHHHHHHHHHCCCCCCCCC
Confidence                                     01123356899999999999753  2478999999999999999999999854 3


Q ss_pred             ChHHHHHHHHhcc----------------------------------------------------CCCCCCCCCcHHHHH
Q 010713          133 SVDEIYDAVVRRQ----------------------------------------------------EIPPIPSGLPPAVEN  160 (503)
Q Consensus       133 ~~~e~~~~i~~~~----------------------------------------------------~~~~~~~~~s~~l~~  160 (503)
                      +..+....+....                                                    ........+++++.+
T Consensus       252 ~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~D  331 (361)
T 4f9c_A          252 DDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYD  331 (361)
T ss_dssp             SHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHH
T ss_pred             CHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHH
Confidence            4434333332100                                                    000112457899999


Q ss_pred             HHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCC
Q 010713          161 VLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDG  194 (503)
Q Consensus       161 LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~  194 (503)
                      ||.+||+.||++|||+.|+++      |+|+.+.
T Consensus       332 Ll~~lL~~dP~~R~ta~eaL~------Hp~f~~i  359 (361)
T 4f9c_A          332 LLDKLLDLNPASRITAEEALL------HPFFKDM  359 (361)
T ss_dssp             HHHHHTCSCTTTSCCHHHHHT------SGGGTTC
T ss_pred             HHHHHCcCChhHCcCHHHHhc------CcccCCC
Confidence            999999999999999999998      9998764

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=3.1e-35  Score=297.58  Aligned_cols=185  Identities=19%  Similarity=0.270  Sum_probs=144.2

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeecccCCCcEEEccCCcEEEEecCCcc
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK--------GILVLNLKPFNFILNEADRAVLGDVGIPH   71 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~--------gIvHrDLKP~NILld~~~~vKL~DFGla~   71 (503)
                      ||||+ |||.+++..   ..++++++++++.|++.||+|||++        +|+||||||+|||++.++++||+|||+++
T Consensus        80 ~Ey~~~gsL~~~l~~---~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~  156 (303)
T 3hmm_A           80 SDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  156 (303)
T ss_dssp             EECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             ecCCCCCcHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCc
Confidence            79998 699999963   5699999999999999999999987        89999999999999999999999999998


Q ss_pred             cccCCCCC-CCCCCCccCCCCCCCccccCCCC---CCCCCCccchHHHHHHHHHHHhCCCCCC----------CC-----
Q 010713           72 LLLGIPLP-SSDLPRRLGTPNYMAPEQWQPEV---RGPISFETDSWGFACSIIEMLTGVQPRC----------GR-----  132 (503)
Q Consensus        72 ~~~~~~~~-~~~~~~~~Gt~~Y~APE~l~~~~---~~~~s~ksDIwSLGviLyeLltG~~Pf~----------~~-----  132 (503)
                      ........ .......+||+.|||||++.+..   ...++.++|||||||+||||+||..||.          +.     
T Consensus       157 ~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~  236 (303)
T 3hmm_A          157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP  236 (303)
T ss_dssp             EEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred             cccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccc
Confidence            76442211 12233568999999999997542   1236779999999999999999976553          21     


Q ss_pred             ChHHHHHHHHhccCCCCCCCC-----CcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          133 SVDEIYDAVVRRQEIPPIPSG-----LPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       133 ~~~e~~~~i~~~~~~~~~~~~-----~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      ...+....+......+.+|..     .+..+.+||.+||+.||++|||+.|+++.|+++..
T Consensus       237 ~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~  297 (303)
T 3hmm_A          237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  297 (303)
T ss_dssp             CHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence            223444444444555555533     33578999999999999999999999999998754

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=1e-33  Score=290.04  Aligned_cols=197  Identities=18%  Similarity=0.334  Sum_probs=172.5

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.  ..+.+++.+++.++.||+.||+|||++||+||||||+|||++.++++||+|||+++....   .
T Consensus        84 ~E~~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~---~  158 (337)
T 1o6l_A           84 MEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS---D  158 (337)
T ss_dssp             EECCTTCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---T
T ss_pred             EeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhccc---C
Confidence            799985 9999987  346799999999999999999999999999999999999999999999999999875432   1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      .......+||+.|+|||++.+.   .++.++|+|||||++|+|++|..||.+.+..+.+..+...  ...++..+++++.
T Consensus       159 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~  233 (337)
T 1o6l_A          159 GATMKTFCGTPEYLAPEVLEDN---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME--EIRFPRTLSPEAK  233 (337)
T ss_dssp             TCCBCCCEECGGGCCGGGGSSS---CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCTTSCHHHH
T ss_pred             CCcccccccChhhCChhhhcCC---CCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHH
Confidence            2234467899999999999754   6889999999999999999999999998888888877663  4456788999999


Q ss_pred             HHHHHhhhcCCCCCC-----CHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCCc
Q 010713          160 NVLLGCFEYDLRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGYT  213 (503)
Q Consensus       160 ~LI~~cL~~DP~~RP-----S~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~~  213 (503)
                      +||.+||+.||.+||     ++.++++      |+|+...+|..+..+...+|..|...
T Consensus       234 ~li~~lL~~dP~~R~g~~~~~~~ei~~------h~~f~~~~~~~~~~~~~~pp~~p~~~  286 (337)
T 1o6l_A          234 SLLAGLLKKDPKQRLGGGPSDAKEVME------HRFFLSINWQDVVQKKLLPPFKPQVT  286 (337)
T ss_dssp             HHHHHHTCSSTTTSTTCSTTTHHHHHT------SGGGTTCCHHHHHTTCSCCSCCCCCS
T ss_pred             HHHHHHhhcCHHHhcCCCCCCHHHHHc------CCCcCCCCHHHHHhCCCCCCCCCCCC
Confidence            999999999999999     8999988      99999999998888888888777643

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=2.8e-34  Score=296.07  Aligned_cols=196  Identities=22%  Similarity=0.327  Sum_probs=168.3

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+| +|.+++..  .+.+++.+++.++.||+.||+|||++||+||||||+|||++.++++||+|||+++....   .
T Consensus       103 ~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~---~  177 (353)
T 3txo_A          103 MEFVNGGDLMFHIQK--SRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC---N  177 (353)
T ss_dssp             EECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC----
T ss_pred             EeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeeccc---C
Confidence            799985 99999974  46799999999999999999999999999999999999999999999999999875432   1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      .......+||+.|+|||++.+.   .++.++|+|||||++|+|++|..||.+.+..+++..+...  ...++..+++.+.
T Consensus       178 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~  252 (353)
T 3txo_A          178 GVTTATFCGTPDYIAPEILQEM---LYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND--EVVYPTWLHEDAT  252 (353)
T ss_dssp             --------CCGGGCCHHHHHHH---HCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCTTSCHHHH
T ss_pred             CccccccCCCcCeEChhhcCCC---CcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHH
Confidence            2234466899999999999743   5889999999999999999999999999999998888764  4456778999999


Q ss_pred             HHHHHhhhcCCCCCCCH------HHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRPLM------TDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGY  212 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~------~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~  212 (503)
                      +||.+||+.||.+||++      .++++      |+|+...+|..+..+...+|..|..
T Consensus       253 ~li~~lL~~dP~~R~~~~~~~~~~~il~------hp~f~~~~w~~l~~~~~~~p~~p~~  305 (353)
T 3txo_A          253 GILKSFMTKNPTMRLGSLTQGGEHAILR------HPFFKEIDWAQLNHRQIEPPFRPRI  305 (353)
T ss_dssp             HHHHHHTCSSGGGSTTSGGGTCTHHHHT------SGGGTTCCHHHHHTTCSCCSCCCCC
T ss_pred             HHHHHHhhhCHHHccCCcccCCHHHHhh------CCcccCCCHHHHhcCcCCCCccCCC
Confidence            99999999999999998      77777      9999999999988888888887753

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=1.1e-33  Score=291.87  Aligned_cols=197  Identities=22%  Similarity=0.345  Sum_probs=172.2

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++..  .+.+++.+++.++.||+.||+|||++||+||||||+|||++.++++||+|||+++....   .
T Consensus       100 ~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~---~  174 (353)
T 2i0e_A          100 MEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW---D  174 (353)
T ss_dssp             EECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC---T
T ss_pred             EeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc---C
Confidence            799985 99999974  45799999999999999999999999999999999999999999999999999975432   1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      .......+||+.|+|||++.+.   .++.++|+|||||++|+|++|..||.+.+..+++..+...  ...++..+++++.
T Consensus       175 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~  249 (353)
T 2i0e_A          175 GVTTKTFCGTPDYIAPEIIAYQ---PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH--NVAYPKSMSKEAV  249 (353)
T ss_dssp             TCCBCCCCSCGGGCCHHHHTTC---CBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCTTSCHHHH
T ss_pred             CcccccccCCccccChhhhcCC---CcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhC--CCCCCCCCCHHHH
Confidence            2234467899999999999754   6889999999999999999999999999998888888764  4456788999999


Q ss_pred             HHHHHhhhcCCCCCCC-----HHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCCc
Q 010713          160 NVLLGCFEYDLRSRPL-----MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGYT  213 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS-----~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~~  213 (503)
                      +||.+||..||.+||+     +.++++      |+|+...+|..+..+..++|..|...
T Consensus       250 ~li~~lL~~dP~~R~~~~~~~~~~i~~------h~~f~~~~w~~l~~~~~~~p~~p~~~  302 (353)
T 2i0e_A          250 AICKGLMTKHPGKRLGCGPEGERDIKE------HAFFRYIDWEKLERKEIQPPYKPKAC  302 (353)
T ss_dssp             HHHHHHTCSCTTSCTTCSTTHHHHHHT------SGGGTTCCHHHHHTTCSCCSCCCCCC
T ss_pred             HHHHHHhhcCHHHcCCCCCCCHHHHhc------CccccCCCHHHHHhCCCCCCcCCCCC
Confidence            9999999999999995     577776      99999999999988888888887643

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=5.7e-34  Score=312.18  Aligned_cols=185  Identities=22%  Similarity=0.340  Sum_probs=161.0

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC--CcEEEEecCCcccccCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA--DRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~--~~vKL~DFGla~~~~~~~   77 (503)
                      ||||+| +|.+++.. ..+.|++.++..|+.||+.||+|||++||+||||||+|||++.+  +.+||+|||+++.+..  
T Consensus       233 ~E~~~gg~L~~~i~~-~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~--  309 (573)
T 3uto_A          233 YEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP--  309 (573)
T ss_dssp             EECCCCCBHHHHHTC-TTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT--
T ss_pred             EeecCCCcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccC--
Confidence            899985 99999963 45679999999999999999999999999999999999999854  7999999999987643  


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC--CCCCCCc
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP--PIPSGLP  155 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~--~~~~~~s  155 (503)
                        .......+||+.|||||++.+.   .|+.++|||||||++|+|++|..||.+.+..+++..+.......  .....++
T Consensus       310 --~~~~~~~~GT~~y~APEv~~~~---~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s  384 (573)
T 3uto_A          310 --KQSVKVTTGTAEFAAPEVAEGK---PVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGIS  384 (573)
T ss_dssp             --TSEEEEECSSGGGCCHHHHTTC---CBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSC
T ss_pred             --CCceeeeEECccccCHHHhCCC---CCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCC
Confidence              2233456899999999999865   68999999999999999999999999999999988887654332  2336789


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCCC
Q 010713          156 PAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGH  199 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~~  199 (503)
                      +++++||.+||+.||.+|||+.|+++      |+|+....|...
T Consensus       385 ~~~~dli~~~L~~dp~~R~t~~e~l~------Hpw~~~~~~~~~  422 (573)
T 3uto_A          385 EDGKDFIRKLLLADPNTRMTIHQALE------HPWLTPGNAPGR  422 (573)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHH------STTTSCCCCTTT
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhc------CcCcCCCCCCCc
Confidence            99999999999999999999999998      999988777654

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=3.2e-33  Score=283.91  Aligned_cols=193  Identities=24%  Similarity=0.342  Sum_probs=171.5

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.  ....+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....    
T Consensus        85 ~e~~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~----  158 (318)
T 1fot_A           85 MDYIEGGELFSLLR--KSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----  158 (318)
T ss_dssp             ECCCCSCBHHHHHH--HTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS----
T ss_pred             EeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCC----
Confidence            799985 9999997  456799999999999999999999999999999999999999999999999999976532    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                        .....+||+.|+|||++.+.   .++.++|+|||||++|+|++|..||.+.+..+.+..+...  ...++..+++++.
T Consensus       159 --~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~  231 (318)
T 1fot_A          159 --VTYTLCGTPDYIAPEVVSTK---PYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA--ELRFPPFFNEDVK  231 (318)
T ss_dssp             --CBCCCCSCTTTCCHHHHTTC---CBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC--CCCCCTTSCHHHH
T ss_pred             --ccccccCCccccCHhHhcCC---CCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCCCCCHHHH
Confidence              22356899999999999754   6889999999999999999999999999888888888764  3456788999999


Q ss_pred             HHHHHhhhcCCCCCC-----CHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGY  212 (503)
Q Consensus       160 ~LI~~cL~~DP~~RP-----S~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~  212 (503)
                      ++|.+||..||.+||     ++.++++      |+|+...+|..+..+..++|..|..
T Consensus       232 ~li~~lL~~dp~~R~~~~~~~~~~i~~------hp~f~~~~~~~~~~~~~~~p~~p~~  283 (318)
T 1fot_A          232 DLLSRLITRDLSQRLGNLQNGTEDVKN------HPWFKEVVWEKLLSRNIETPYEPPI  283 (318)
T ss_dssp             HHHHHHTCSCTTTCTTSSTTTTHHHHT------SGGGSSCCHHHHHTTCSCCSCCCCC
T ss_pred             HHHHHHhccCHHHcCCCcCCCHHHHhc------CccccCCCHHHHHhCCCCCCCCCCc
Confidence            999999999999999     8899988      9999999999988888877777654

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=2.6e-33  Score=291.16  Aligned_cols=200  Identities=23%  Similarity=0.337  Sum_probs=172.5

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++..  .+.+++..++.++.||+.||+|||++||+||||||+|||++.++++||+|||+++.....   
T Consensus       118 ~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~---  192 (373)
T 2r5t_A          118 LDYINGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH---  192 (373)
T ss_dssp             EECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC---
T ss_pred             EeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccC---
Confidence            799985 99999974  467999999999999999999999999999999999999999999999999999764321   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      .......+||+.|+|||++.+.   .++.++|+|||||++|||++|..||.+.+..+++..+...  ...++..++..+.
T Consensus       193 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~  267 (373)
T 2r5t_A          193 NSTTSTFCGTPEYLAPEVLHKQ---PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK--PLQLKPNITNSAR  267 (373)
T ss_dssp             CCCCCSBSCCCCCCCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHS--CCCCCSSSCHHHH
T ss_pred             CCccccccCCccccCHHHhCCC---CCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc--ccCCCCCCCHHHH
Confidence            2234567899999999999854   6889999999999999999999999999998888888764  3456778999999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGY  212 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~  212 (503)
                      +||.+||+.||.+||++.+.++.+.  .|+|+...+|..+..+...+|..|..
T Consensus       268 ~li~~lL~~dp~~R~~~~~~~~~i~--~h~~f~~~~w~~l~~~~~~pp~~p~~  318 (373)
T 2r5t_A          268 HLLEGLLQKDRTKRLGAKDDFMEIK--SHVFFSLINWDDLINKKITPPFNPNV  318 (373)
T ss_dssp             HHHHHHTCSSGGGSTTTTTTHHHHH--TSGGGTTCCHHHHHTTCSCCSCCCSC
T ss_pred             HHHHHHcccCHHhCCCCCCCHHHHh--CCccccCCCHHHHHhCCCCCCCCCCC
Confidence            9999999999999999864443332  38999999999998888888887754

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=1e-33  Score=291.15  Aligned_cols=196  Identities=23%  Similarity=0.365  Sum_probs=167.3

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+ |+|.+++..  .+.+++.++..++.||+.||+|||++||+||||||+|||++.++++||+|||+++.....   
T Consensus        97 ~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~---  171 (345)
T 1xjd_A           97 MEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG---  171 (345)
T ss_dssp             EECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT---
T ss_pred             EeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccC---
Confidence            79997 599999974  467999999999999999999999999999999999999999999999999998754321   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      .......+||+.|+|||++.+.   .++.++|+|||||++|+|++|..||.+.+..+++..+...  .+.++..+++++.
T Consensus       172 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~  246 (345)
T 1xjd_A          172 DAKTNTFCGTPDYIAPEILLGQ---KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD--NPFYPRWLEKEAK  246 (345)
T ss_dssp             TCCBCCCCSCGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCTTSCHHHH
T ss_pred             CCcccCCCCCcccCChhhhcCC---CCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhC--CCCCCcccCHHHH
Confidence            2233567899999999999854   6889999999999999999999999999988888887664  4556788999999


Q ss_pred             HHHHHhhhcCCCCCCCHH-HHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRPLMT-DILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGY  212 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~-elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~  212 (503)
                      +||.+||..||.+||++. ++++      |+|+...+|..+..+..++|..|..
T Consensus       247 ~li~~lL~~dp~~R~~~~~~i~~------hp~f~~~~w~~l~~~~~~~p~~p~~  294 (345)
T 1xjd_A          247 DLLVKLFVREPEKRLGVRGDIRQ------HPLFREINWEELERKEIDPPFRPKV  294 (345)
T ss_dssp             HHHHHHSCSSGGGSBTTBSCGGG------SGGGTTCCHHHHHTTCSCC------
T ss_pred             HHHHHHhcCCHhHcCCChHHHHc------CccccCCCHHHHhhCCCCCCcCCCC
Confidence            999999999999999997 6666      9999999999988888888877653

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=5.6e-33  Score=291.31  Aligned_cols=197  Identities=23%  Similarity=0.348  Sum_probs=166.9

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+| +|.+++..  .+.+++..+..++.||+.||+|||++||+||||||+|||++.++++||+|||+++....   .
T Consensus       132 ~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~---~  206 (396)
T 4dc2_A          132 IEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR---P  206 (396)
T ss_dssp             EECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC---T
T ss_pred             EEcCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeeccc---C
Confidence            799985 99999874  46799999999999999999999999999999999999999999999999999975322   1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCC---------ChHHHHHHHHhccCCCCC
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR---------SVDEIYDAVVRRQEIPPI  150 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~---------~~~e~~~~i~~~~~~~~~  150 (503)
                      .......+||+.|+|||++.+.   .++.++|+|||||++|+|++|..||...         ....+...+..  ....+
T Consensus       207 ~~~~~~~~gt~~Y~aPE~l~~~---~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~  281 (396)
T 4dc2_A          207 GDTTSTFCGTPNYIAPEILRGE---DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRI  281 (396)
T ss_dssp             TCCBCCCCBCGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH--CCCCC
T ss_pred             CCccccccCCcccCCchhhcCC---CCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc--cccCC
Confidence            2334567899999999999854   6889999999999999999999999642         22334444444  44567


Q ss_pred             CCCCcHHHHHHHHHhhhcCCCCCCCH------HHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCCc
Q 010713          151 PSGLPPAVENVLLGCFEYDLRSRPLM------TDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGYT  213 (503)
Q Consensus       151 ~~~~s~~l~~LI~~cL~~DP~~RPS~------~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~~  213 (503)
                      |..+++++.+||.+||+.||.+||++      .|+++      |+||...+|..+..+...+|..|...
T Consensus       282 p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~------Hpff~~i~w~~l~~~~~~pp~~p~~~  344 (396)
T 4dc2_A          282 PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG------HPFFRNVDWDMMEQKQVVPPFKPNIS  344 (396)
T ss_dssp             CTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH------STTTTTCCHHHHHTTCSCCSCCCCCC
T ss_pred             CCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc------CccccCCCHHHHHcCCCCCCCcCCCC
Confidence            88899999999999999999999985      66766      99999999999988888888887643

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=3.3e-33  Score=287.57  Aligned_cols=193  Identities=22%  Similarity=0.324  Sum_probs=171.7

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++..  .+.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....    
T Consensus       120 ~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~----  193 (350)
T 1rdq_E          120 MEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----  193 (350)
T ss_dssp             EECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS----
T ss_pred             EcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccC----
Confidence            79997 599999974  45799999999999999999999999999999999999999999999999999987533    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                        .....+||+.|+|||++.+.   .++.++|+|||||++|+|++|..||.+.+..+.+..+...  ...++..+++++.
T Consensus       194 --~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~  266 (350)
T 1rdq_E          194 --RTWTLCGTPEALAPEIILSK---GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG--KVRFPSHFSSDLK  266 (350)
T ss_dssp             --CBCCCEECGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCTTCCHHHH
T ss_pred             --CcccccCCccccCHHHhcCC---CCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHH
Confidence              22356899999999999854   6889999999999999999999999999988888888764  3556788999999


Q ss_pred             HHHHHhhhcCCCCCCC-----HHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRPL-----MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGY  212 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS-----~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~  212 (503)
                      +||.+||+.||.+||+     +.++++      |+|+...+|..+..+..++|..|..
T Consensus       267 ~li~~lL~~dp~~R~~~~~~~~~ei~~------h~~f~~~~w~~~~~~~~~~p~~p~~  318 (350)
T 1rdq_E          267 DLLRNLLQVDLTKRFGNLKNGVNDIKN------HKWFATTDWIAIYQRKVEAPFIPKF  318 (350)
T ss_dssp             HHHHHHSCSCTTTCTTSSTTTTHHHHT------SGGGTTCCHHHHHTTCSCCSCCCCC
T ss_pred             HHHHHHhhcCHHhccCCccCCHHHHHh------CcCcCCCCHHHHhhccCCCCCCCCC
Confidence            9999999999999998     888887      9999999999888888888877754

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=7.5e-33  Score=284.25  Aligned_cols=196  Identities=23%  Similarity=0.351  Sum_probs=164.4

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++..  .+.+++.+++.++.||+.||+|||++||+||||||+|||++.++++||+|||+++....   .
T Consensus        89 ~e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~---~  163 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR---P  163 (345)
T ss_dssp             ECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC---T
T ss_pred             EeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccC---C
Confidence            799985 99999974  46799999999999999999999999999999999999999999999999999875432   1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCC---------CChHHHHHHHHhccCCCCC
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG---------RSVDEIYDAVVRRQEIPPI  150 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~---------~~~~e~~~~i~~~~~~~~~  150 (503)
                      .......+||+.|+|||++.+.   .++.++|+|||||++|+|++|..||..         .........+..  ....+
T Consensus       164 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~  238 (345)
T 3a8x_A          164 GDTTSTFCGTPNYIAPEILRGE---DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRI  238 (345)
T ss_dssp             TCCBCCCCSCGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHH--CCCCC
T ss_pred             CCcccccCCCccccCccccCCC---CCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHc--CCCCC
Confidence            2234466899999999999854   688999999999999999999999975         223344444444  34557


Q ss_pred             CCCCcHHHHHHHHHhhhcCCCCCCCH------HHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCC
Q 010713          151 PSGLPPAVENVLLGCFEYDLRSRPLM------TDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGY  212 (503)
Q Consensus       151 ~~~~s~~l~~LI~~cL~~DP~~RPS~------~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~  212 (503)
                      +..++..+.+||.+||+.||.+||++      .++++      |+|+...+|..+..+...+|..|..
T Consensus       239 p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~------hp~f~~~~w~~~~~~~~~~p~~p~~  300 (345)
T 3a8x_A          239 PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG------HPFFRNVDWDMMEQKQVVPPFKPNI  300 (345)
T ss_dssp             CTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT------SGGGTTCCHHHHHTTCSCCSCCCCC
T ss_pred             CCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc------CCccCCCCHHHHHhCCCCCCcCCCC
Confidence            78899999999999999999999985      56665      9999999999888888888777654

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=8.1e-33  Score=308.37  Aligned_cols=198  Identities=22%  Similarity=0.347  Sum_probs=175.0

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++..  .+.+++.+++.|+.||+.||+|||++||+||||||+|||++.++++||+|||+++....   .
T Consensus       421 ~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~---~  495 (674)
T 3pfq_A          421 MEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW---D  495 (674)
T ss_dssp             EECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCC---T
T ss_pred             EeCcCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeecccc---C
Confidence            79998 599999974  46799999999999999999999999999999999999999999999999999976432   1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      .......+||+.|+|||++.+.   .++.++|+|||||++|||++|..||.+.+..+++..+...  ...++..+++++.
T Consensus       496 ~~~~~~~~GT~~Y~APE~l~~~---~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~  570 (674)
T 3pfq_A          496 GVTTKTFCGTPDYIAPEIIAYQ---PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH--NVAYPKSMSKEAV  570 (674)
T ss_dssp             TCCBCCCCSCSSSCCHHHHTCC---CBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSS--CCCCCTTSCHHHH
T ss_pred             CcccccccCCCcccCHhhhcCC---CCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhC--CCCCCccCCHHHH
Confidence            2234567899999999999754   6899999999999999999999999999999999888763  4567788999999


Q ss_pred             HHHHHhhhcCCCCCCCH-----HHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCCcc
Q 010713          160 NVLLGCFEYDLRSRPLM-----TDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGYTE  214 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~-----~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~~~  214 (503)
                      +||.+||+.||.+||++     .||++      |+||...+|..+..+.+.+|..|....
T Consensus       571 ~li~~lL~~dP~~R~~~~~~~~~ei~~------h~ff~~i~w~~l~~~~~~pp~~p~~~~  624 (674)
T 3pfq_A          571 AICKGLMTKHPGKRLGCGPEGERDIKE------HAFFRYIDWEKLERKEIQPPYKPKASG  624 (674)
T ss_dssp             HHHHHHSCSSSTTCTTCSTTHHHHHHS------SGGGSSCCHHHHTTTCSCCSCCCBCCG
T ss_pred             HHHHHHccCCHHHCCCCCCCcHHHHhc------CccccCCCHHHHHhCCCCCCCCCcCCC
Confidence            99999999999999987     67766      999999999999999999998886543

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=1e-32  Score=291.92  Aligned_cols=196  Identities=19%  Similarity=0.329  Sum_probs=170.3

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecccCCCcEEEccCCcEEEEecCCcccccCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs-~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~   78 (503)
                      |||++| +|.+++..  ...+++..+..++.||+.||+|||+ +||+||||||+|||++.++.+||+|||++.....   
T Consensus       227 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~---  301 (446)
T 4ejn_A          227 MEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK---  301 (446)
T ss_dssp             ECCCSSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC---
T ss_pred             EeeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccC---
Confidence            799985 99999874  4679999999999999999999998 9999999999999999999999999999875432   


Q ss_pred             CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           79 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        79 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........+||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.+..+....+...  ...++..+++++
T Consensus       302 ~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~  376 (446)
T 4ejn_A          302 DGATMKTFCGTPEYLAPEVLEDN---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME--EIRFPRTLGPEA  376 (446)
T ss_dssp             -----CCSSSCGGGCCHHHHHTS---CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCTTSCHHH
T ss_pred             CCcccccccCCccccCHhhcCCC---CCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhC--CCCCCccCCHHH
Confidence            12234567899999999999744   6899999999999999999999999999888888877664  345678899999


Q ss_pred             HHHHHHhhhcCCCCCC-----CHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCC
Q 010713          159 ENVLLGCFEYDLRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGY  212 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RP-----S~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~  212 (503)
                      .+||.+||+.||.+||     ++.|+++      |+|+.+.+|..+..+..++|..|..
T Consensus       377 ~~li~~~L~~dP~~R~~~~~~t~~ell~------hp~f~~~~~~~~~~~~~~pp~~p~~  429 (446)
T 4ejn_A          377 KSLLSGLLKKDPKQRLGGGSEDAKEIMQ------HRFFAGIVWQHVYEKKLSPPFKPQV  429 (446)
T ss_dssp             HHHHHHHTCSSTTTSTTCSTTTHHHHHT------SGGGTTCCHHHHHTTCSCCSCCCSC
T ss_pred             HHHHHHHcccCHHHhCCCCCCCHHHHHh------CccccCCCHHHHhhCcCCCCccCCC
Confidence            9999999999999999     9999998      9999999999888888888777754

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.98  E-value=3.4e-32  Score=284.20  Aligned_cols=198  Identities=21%  Similarity=0.298  Sum_probs=168.0

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.  ....+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....    
T Consensus        94 ~e~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~----  167 (384)
T 4fr4_A           94 VDLLLGGDLRYHLQ--QNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR----  167 (384)
T ss_dssp             ECCCTTEEHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT----
T ss_pred             EecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccC----
Confidence            799975 9999996  466799999999999999999999999999999999999999999999999999987543    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCC---ChHHHHHHHHhccCCCCCCCCCcH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR---SVDEIYDAVVRRQEIPPIPSGLPP  156 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~---~~~e~~~~i~~~~~~~~~~~~~s~  156 (503)
                      .......+||+.|+|||++.......++.++|+|||||++|+|++|..||...   ...+....+..  ....++..+++
T Consensus       168 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~--~~~~~p~~~s~  245 (384)
T 4fr4_A          168 ETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFET--TVVTYPSAWSQ  245 (384)
T ss_dssp             TCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHH--CCCCCCTTSCH
T ss_pred             CCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhh--cccCCCCcCCH
Confidence            23345678999999999997543446889999999999999999999999753   33344444433  44567788999


Q ss_pred             HHHHHHHHhhhcCCCCCCC-HHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCC
Q 010713          157 AVENVLLGCFEYDLRSRPL-MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGY  212 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~RPS-~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~  212 (503)
                      .+.+||.+||+.||.+||+ +.++++      ++|+.+.+|..+..+...+|..|..
T Consensus       246 ~~~~li~~lL~~dP~~R~s~~~~l~~------hp~f~~~~w~~~~~~~~~p~~~p~~  296 (384)
T 4fr4_A          246 EMVSLLKKLLEPNPDQRFSQLSDVQN------FPYMNDINWDAVFQKRLIPGFIPNK  296 (384)
T ss_dssp             HHHHHHHHHSCSSGGGSCCSHHHHHT------SGGGTTCCHHHHHTTCSCCCCCCSC
T ss_pred             HHHHHHHHHhcCCHhHhcccHHHHHc------ChhhhcCCHHHHHhCCCCCCCCCCC
Confidence            9999999999999999998 777766      9999999999988888888887764

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.98  E-value=2e-32  Score=278.02  Aligned_cols=195  Identities=21%  Similarity=0.296  Sum_probs=165.2

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+| +|.+++..  .+.+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||++......   
T Consensus       100 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~---  174 (327)
T 3a62_A          100 LEYLSGGELFMQLER--EGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD---  174 (327)
T ss_dssp             EECCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC---------
T ss_pred             EeCCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccC---
Confidence            799985 99999973  467999999999999999999999999999999999999999999999999998754321   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........||+.|+|||++.+.   .++.++|+|||||++|+|++|..||.+.+..+....+...  ...++..+++.+.
T Consensus       175 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~  249 (327)
T 3a62_A          175 GTVTHTFCGTIEYMAPEILMRS---GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC--KLNLPPYLTQEAR  249 (327)
T ss_dssp             ----CTTSSCCTTSCHHHHTTS---CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT--CCCCCTTSCHHHH
T ss_pred             CccccccCCCcCccCHhhCcCC---CCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC--CCCCCCCCCHHHH
Confidence            2223456799999999999754   6789999999999999999999999998888888777664  3456778999999


Q ss_pred             HHHHHhhhcCCCCCC-----CHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG  211 (503)
Q Consensus       160 ~LI~~cL~~DP~~RP-----S~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~  211 (503)
                      +||.+||+.||.+||     ++.++++      |+|+...+|..+..+...+|..|.
T Consensus       250 ~li~~~L~~dp~~R~~~~~~~~~e~l~------hp~f~~~~~~~~~~~~~~~p~~p~  300 (327)
T 3a62_A          250 DLLKKLLKRNAASRLGAGPGDAGEVQA------HPFFRHINWEELLARKVEPPFKPL  300 (327)
T ss_dssp             HHHHHHSCSCGGGSTTSSTTTHHHHHH------SGGGSSCCHHHHHTTCSCCSCCCC
T ss_pred             HHHHHHHhcCHhhccCCCCCCHHHHHc------CCcccCCCHHHHhhccCCCCCCCC
Confidence            999999999999999     7888888      999999999888777777776664

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.98  E-value=9e-33  Score=290.90  Aligned_cols=202  Identities=18%  Similarity=0.278  Sum_probs=172.2

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+| +|.+++..   ..+++..+..++.||+.||+|||++||+||||||+|||++.++++||+|||+++......  
T Consensus       148 ~E~~~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~--  222 (410)
T 3v8s_A          148 MEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--  222 (410)
T ss_dssp             ECCCTTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS--
T ss_pred             EeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCC--
Confidence            799975 99998853   469999999999999999999999999999999999999999999999999997654321  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCC--CCCCcH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVR-GPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPI--PSGLPP  156 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~-~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~--~~~~s~  156 (503)
                      .......+||+.|+|||++.+... ..++.++|+|||||++|+|++|..||.+.+..+.+..+........+  ...+++
T Consensus       223 ~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~  302 (410)
T 3v8s_A          223 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISK  302 (410)
T ss_dssp             EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCH
T ss_pred             cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcccccH
Confidence            112346689999999999975421 12778999999999999999999999999999988888765433333  357999


Q ss_pred             HHHHHHHHhhhcCCCC--CCCHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCCc
Q 010713          157 AVENVLLGCFEYDLRS--RPLMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGYT  213 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~--RPS~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~~  213 (503)
                      ++++||.+||..+|.+  ||++.|+++      |+|+...+|.....+...+|..|...
T Consensus       303 ~~~~li~~lL~~~~~rlgR~~~~ei~~------Hp~f~~~~w~~~~~~~~~~p~~p~~~  355 (410)
T 3v8s_A          303 EAKNLICAFLTDREVRLGRNGVEEIKR------HLFFKNDQWAWETLRDTVAPVVPDLS  355 (410)
T ss_dssp             HHHHHHHHHSSCGGGCTTSSCHHHHHT------SGGGCCSSCCSTTGGGSCCSCCCCCS
T ss_pred             HHHHHHHHHccChhhhCCCCCHHHHhc------CccccCCCHHHHhhcccCCCCCCcCC
Confidence            9999999999999988  999999999      99999999998888888888888643

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.98  E-value=1.8e-32  Score=290.94  Aligned_cols=201  Identities=19%  Similarity=0.271  Sum_probs=168.0

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+ |+|.+++.. ....+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......  
T Consensus       153 ~Ey~~gg~L~~~l~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~--  229 (437)
T 4aw2_A          153 MDYYVGGDLLTLLSK-FEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG--  229 (437)
T ss_dssp             ECCCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS--
T ss_pred             EecCCCCcHHHHHHH-ccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCC--
Confidence            79997 599999974 35679999999999999999999999999999999999999999999999999997654321  


Q ss_pred             CCCCCCccCCCCCCCccccCCC--CCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCC---CCCC
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPE--VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPI---PSGL  154 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~--~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~---~~~~  154 (503)
                      .......+||+.|+|||++...  ....++.++|||||||++|||++|+.||.+.+..+.+..+........+   ...+
T Consensus       230 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~  309 (437)
T 4aw2_A          230 TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDV  309 (437)
T ss_dssp             CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCS
T ss_pred             CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccC
Confidence            1122346899999999998621  1235789999999999999999999999999999888888754333333   3568


Q ss_pred             cHHHHHHHHHhhhcCCCC--CCCHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCC
Q 010713          155 PPAVENVLLGCFEYDLRS--RPLMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGY  212 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~--RPS~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~  212 (503)
                      ++++++||.+||..+|++  ||++.|+++      |+|+.+.+|..+  +..++|..|..
T Consensus       310 s~~~~dLi~~lL~~~~~r~~r~~~~eil~------Hpff~~i~w~~l--~~~~~p~~P~~  361 (437)
T 4aw2_A          310 SENAKDLIRRLICSREHRLGQNGIEDFKK------HPFFSGIDWDNI--RNCEAPYIPEV  361 (437)
T ss_dssp             CHHHHHHHHTTSSCGGGCTTTTTTHHHHT------SGGGTTCCTTTG--GGSCCSCCCCC
T ss_pred             CHHHHHHHHHHhcccccccCCCCHHHHhC------CCccCCCCHHHH--hhCCCCCCCcC
Confidence            999999999999988888  999999998      999999999998  45566666653

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.98  E-value=5.5e-32  Score=270.80  Aligned_cols=180  Identities=18%  Similarity=0.278  Sum_probs=153.0

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++|+|.+++.......+++.++..++.||+.||+|||++||+||||||+||+++.++.+||+|||++.....    .
T Consensus        98 ~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~----~  173 (308)
T 3g33_A           98 FEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY----Q  173 (308)
T ss_dssp             EECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSCTTTSTT----C
T ss_pred             ehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCccccccCC----C
Confidence            689999999999865555699999999999999999999999999999999999999999999999999976533    2


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC-----------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-----------  149 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~-----------  149 (503)
                      .......||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.+..+....+......++           
T Consensus       174 ~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  250 (308)
T 3g33_A          174 MALTPVVVTLWYRAPEVLLQS---TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP  250 (308)
T ss_dssp             CCSGGGGCCCSSCCHHHHHTS---CCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSC
T ss_pred             cccCCccccccccCchHHcCC---CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhcc
Confidence            233456889999999999744   688999999999999999999999999888887777765322211           


Q ss_pred             --------------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          150 --------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       150 --------------~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                                    ....+++.+.+||.+||+.||++|||+.|+++      |+|+..
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~------h~~~~~  302 (308)
T 3g33_A          251 RGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ------HSYLHK  302 (308)
T ss_dssp             GGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT------STTC--
T ss_pred             ccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc------CccccC
Confidence                          11357899999999999999999999999998      888764

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.97  E-value=8.1e-32  Score=274.70  Aligned_cols=179  Identities=22%  Similarity=0.325  Sum_probs=155.4

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++..  .+.+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....    
T Consensus        93 ~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~----  166 (328)
T 3fe3_A           93 MEYASGGEVFDYLVA--HGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV----  166 (328)
T ss_dssp             ECCCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS----
T ss_pred             EECCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCC----
Confidence            79997 599999974  46799999999999999999999999999999999999999999999999999976543    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      .......+||+.|+|||++.+..  ..+.++|||||||++|+|++|..||.+.+..+....+...  ...+|..+++++.
T Consensus       167 ~~~~~~~~gt~~y~aPE~~~~~~--~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~  242 (328)
T 3fe3_A          167 GGKLDAFCGAPPYAAPELFQGKK--YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG--KYRIPFYMSTDCE  242 (328)
T ss_dssp             SCGGGTTSSSGGGCCHHHHHTCC--CCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCTTSCHHHH
T ss_pred             CCccccccCCcceeCcccccCCC--cCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCCCCCHHHH
Confidence            22334568999999999997541  2357899999999999999999999999988888887764  3456778999999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCC
Q 010713          160 NVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGG  195 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~  195 (503)
                      +||.+||+.||.+|||+.|+++      ++|+....
T Consensus       243 ~li~~~L~~dP~~R~t~~eil~------h~~~~~~~  272 (328)
T 3fe3_A          243 NLLKRFLVLNPIKRGTLEQIMK------DRWINAGH  272 (328)
T ss_dssp             HHHHHHCCSSTTTSCCHHHHTT------CTTTTTTC
T ss_pred             HHHHHHCCCChhHCcCHHHHhc------CHhhcCCC
Confidence            9999999999999999999998      88876543

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.97  E-value=8e-32  Score=266.96  Aligned_cols=185  Identities=16%  Similarity=0.232  Sum_probs=151.4

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCc-----EEEEecCCcccccC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR-----AVLGDVGIPHLLLG   75 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~-----vKL~DFGla~~~~~   75 (503)
                      |||++|+|.+++.. ....+++.+++.++.||+.||+|||++||+||||||+||+++.++.     +||+|||++.....
T Consensus        85 ~e~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~  163 (298)
T 1csn_A           85 IDLLGPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD  163 (298)
T ss_dssp             EECCCCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred             EEecCCCHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccc
Confidence            78998899999975 3556999999999999999999999999999999999999987765     99999999987654


Q ss_pred             CCCC----CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCC---ChHHHHHHHHhccCCC
Q 010713           76 IPLP----SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR---SVDEIYDAVVRRQEIP  148 (503)
Q Consensus        76 ~~~~----~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~---~~~e~~~~i~~~~~~~  148 (503)
                      ....    ........||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.   ...+.+..+.......
T Consensus       164 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  240 (298)
T 1csn_A          164 PVTKQHIPYREKKNLSGTARYMSINTHLGR---EQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST  240 (298)
T ss_dssp             TTTCCBCCCCCCCCCCSCTTTCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS
T ss_pred             ccccccccccCccCCCCCcccCCchhhcCC---CCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCc
Confidence            2211    1223456799999999999754   6889999999999999999999999874   3444444443322212


Q ss_pred             ---CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          149 ---PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       149 ---~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                         .....+++++.++|.+||+.||++||++.++++.|+++...
T Consensus       241 ~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~  284 (298)
T 1csn_A          241 PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER  284 (298)
T ss_dssp             CHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             cHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence               23357899999999999999999999999999999988654

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.97  E-value=4.4e-32  Score=285.82  Aligned_cols=200  Identities=22%  Similarity=0.329  Sum_probs=164.0

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.. ....+++..++.++.||+.||+|||++||+||||||+|||++.++++||+|||+++......  
T Consensus       140 mE~~~gg~L~~~l~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~--  216 (412)
T 2vd5_A          140 MEYYVGGDLLTLLSK-FGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG--  216 (412)
T ss_dssp             ECCCCSCBHHHHHHH-HSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS--
T ss_pred             EcCCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCCC--
Confidence            79997 599999975 34579999999999999999999999999999999999999999999999999997754321  


Q ss_pred             CCCCCCccCCCCCCCccccCCC----CCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccC---CCCCCC
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPE----VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE---IPPIPS  152 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~----~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~---~~~~~~  152 (503)
                      .......+||+.|+|||++...    ....++.++|+|||||++|||++|+.||.+.+..+.+..+.....   .+..+.
T Consensus       217 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~  296 (412)
T 2vd5_A          217 TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDE  296 (412)
T ss_dssp             CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----
T ss_pred             ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCcccc
Confidence            1122356899999999998621    123578999999999999999999999999998888888875332   233346


Q ss_pred             CCcHHHHHHHHHhhhcCCCCC---CCHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCC
Q 010713          153 GLPPAVENVLLGCFEYDLRSR---PLMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGY  212 (503)
Q Consensus       153 ~~s~~l~~LI~~cL~~DP~~R---PS~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~  212 (503)
                      .+++++++||.+||. +|.+|   |++.|+++      |+||...+|..+.  ...+|..|..
T Consensus       297 ~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~------Hpff~~i~w~~l~--~~~~p~~p~~  350 (412)
T 2vd5_A          297 GVPEEARDFIQRLLC-PPETRLGRGGAGDFRT------HPFFFGLDWDGLR--DSVPPFTPDF  350 (412)
T ss_dssp             CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT------SGGGTTCCSTTST--TSCCSCCCC-
T ss_pred             CCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc------CCCcCCCCHHHHh--hcCCCCCCcC
Confidence            899999999999999 99998   58999987      9999999999984  3456666654

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.97  E-value=3.2e-32  Score=279.98  Aligned_cols=198  Identities=14%  Similarity=0.121  Sum_probs=150.8

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEc--cCCcEEEEecCCcccccCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN--EADRAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld--~~~~vKL~DFGla~~~~~~~~   78 (503)
                      ||||+|+|.+++.. ....+++.+++.++.||+.||+|||++||+||||||+|||++  .++.+||+|||+++.......
T Consensus       131 ~e~~g~~L~~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~  209 (364)
T 3op5_A          131 MDRFGSDLQKIYEA-NAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGV  209 (364)
T ss_dssp             EECEEEEHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGC
T ss_pred             EeCCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCc
Confidence            79997799999975 457799999999999999999999999999999999999999  889999999999976543211


Q ss_pred             C----CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC------
Q 010713           79 P----SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------  148 (503)
Q Consensus        79 ~----~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~------  148 (503)
                      .    ........||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.................      
T Consensus       210 ~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  286 (364)
T 3op5_A          210 HKAYAADPKRCHDGTIEFTSIDAHNGV---APSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLM  286 (364)
T ss_dssp             CCCSSCCSSCCCCCCTTTCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHH
T ss_pred             ccccccCcccccCCCCCccCHHHhCCC---CCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHH
Confidence            1    1112345699999999999854   58999999999999999999999998643222211111100000      


Q ss_pred             ---CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccC----cCCCCCCCCCCCc
Q 010713          149 ---PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNS----VHSDGGWTGHGSR  202 (503)
Q Consensus       149 ---~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~----~~~~~~w~~~~~~  202 (503)
                         .....+++++.++|..||+.||.+||++.++++.|+.+...    .....+|....+.
T Consensus       287 ~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~~~~~~  347 (364)
T 3op5_A          287 DKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDLSVVENG  347 (364)
T ss_dssp             HHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCCCCCCC------
T ss_pred             HHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCcCCccceEeccCC
Confidence               01257899999999999999999999999999998877653    3445566554443

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.97  E-value=1.3e-31  Score=270.25  Aligned_cols=183  Identities=24%  Similarity=0.362  Sum_probs=150.3

Q ss_pred             CcCCCC-CHHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecccCCCcEEEccCCcEEEEecCCcccccCC
Q 010713            1 MKFYEG-SVGDRMAQLK-GGKLSLSNVFRYAIDLAQGILQLHSKG--ILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~-~~~Ls~~~vl~i~~QIl~aL~yLHs~g--IvHrDLKP~NILld~~~~vKL~DFGla~~~~~~   76 (503)
                      |||++| +|.+++.... ...+++.+++.++.||+.||+|||++|  |+||||||+||+++.++.+||+|||++......
T Consensus       113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~  192 (309)
T 3p86_A          113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST  192 (309)
T ss_dssp             EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC--------
T ss_pred             EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccccc
Confidence            799985 9999997421 123999999999999999999999999  999999999999999999999999998754321


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcH
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP  156 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~  156 (503)
                         ........||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.+..+....+........++..+++
T Consensus       193 ---~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (309)
T 3p86_A          193 ---FLSSKSAAGTPEWMAPEVLRDE---PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNP  266 (309)
T ss_dssp             ------------CCTTSCHHHHTTC---CCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSCH
T ss_pred             ---ccccccCCCCccccChhhhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCH
Confidence               1223456799999999999854   5789999999999999999999999999888888777666677778899999


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          157 AVENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      .+.+||.+||+.||.+|||+.++++.|+.+...
T Consensus       267 ~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~  299 (309)
T 3p86_A          267 QVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS  299 (309)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            999999999999999999999999999988654

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.97  E-value=1.5e-31  Score=269.39  Aligned_cols=184  Identities=22%  Similarity=0.293  Sum_probs=151.8

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++|+|.+.+.. ....+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....   ..
T Consensus        98 ~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~---~~  173 (311)
T 3niz_A           98 FEFMEKDLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGI---PV  173 (311)
T ss_dssp             EECCSEEHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTS---CC
T ss_pred             EcCCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCC---Cc
Confidence            79999999999875 455699999999999999999999999999999999999999999999999999977543   12


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC-----------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-----------  149 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~-----------  149 (503)
                      .......+|+.|+|||++.+.  ..++.++|||||||++|+|++|..||.+....+....+......+.           
T Consensus       174 ~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  251 (311)
T 3niz_A          174 RSYTHEVVTLWYRAPDVLMGS--KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELP  251 (311)
T ss_dssp             C---CCCCCCTTCCHHHHTTC--CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSH
T ss_pred             ccccCCcccCCcCCHHHhcCC--CCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccc
Confidence            233456789999999998753  2578999999999999999999999988776666655543221111           


Q ss_pred             -----------------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCC
Q 010713          150 -----------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGW  196 (503)
Q Consensus       150 -----------------~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w  196 (503)
                                       ....+++++.+||.+||+.||.+|||+.|+++      |+|+.+.++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~------hp~f~~~~~  309 (311)
T 3niz_A          252 LWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN------HPYFKDLDP  309 (311)
T ss_dssp             HHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT------SGGGTTSCT
T ss_pred             hhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc------CcccccCCc
Confidence                             12357789999999999999999999999998      999887654

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.97  E-value=9.1e-32  Score=265.92  Aligned_cols=185  Identities=18%  Similarity=0.231  Sum_probs=150.3

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEE---ccCCcEEEEecCCcccccCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL---NEADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILl---d~~~~vKL~DFGla~~~~~~~   77 (503)
                      |||++|+|.+++.. ....+++.+++.++.||+.||+|||++||+||||||+||++   +.++.+||+|||++.......
T Consensus        84 ~e~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~  162 (296)
T 4hgt_A           84 MELLGPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR  162 (296)
T ss_dssp             EECCCCBHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred             EEccCCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcc
Confidence            78998899999975 45679999999999999999999999999999999999999   788999999999998764432


Q ss_pred             CC----CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHhccCCC--
Q 010713           78 LP----SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD---EIYDAVVRRQEIP--  148 (503)
Q Consensus        78 ~~----~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~---e~~~~i~~~~~~~--  148 (503)
                      ..    ........||+.|+|||++.+.   .++.++|||||||++|+|++|+.||.+....   +.+..+.......  
T Consensus       163 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  239 (296)
T 4hgt_A          163 THQHIPYRENKNLTGTARYASINTHLGI---EQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI  239 (296)
T ss_dssp             TCCBCCCCCSCCCCSCGGGCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred             cCccCCCCcccccCCCccccchHHhcCC---CCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh
Confidence            11    1223456799999999999854   6889999999999999999999999864322   2222222221111  


Q ss_pred             -CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          149 -PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       149 -~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                       .....+++.+.++|.+||+.||++|||+.++++.|+++...
T Consensus       240 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~  281 (296)
T 4hgt_A          240 EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  281 (296)
T ss_dssp             HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             hhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence             12367899999999999999999999999999999987664

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.97  E-value=1.3e-31  Score=261.08  Aligned_cols=180  Identities=23%  Similarity=0.336  Sum_probs=157.9

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecccCCCcEEEccCCcEEEEecCCcccccCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG--ILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~g--IvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~   77 (503)
                      |||++| +|.+++.......+++.+++.++.||+.||+|||+++  |+||||||+||+++.++.++|+||+++...    
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~----  163 (271)
T 3kmu_A           88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF----  163 (271)
T ss_dssp             EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT----
T ss_pred             ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeee----
Confidence            789985 9999998544446999999999999999999999999  999999999999999999999998876442    


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHH
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA  157 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~  157 (503)
                          ......+|+.|+|||++.+.....++.++|||||||++|+|++|..||.+.+..+....+......+..+..+++.
T Consensus       164 ----~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (271)
T 3kmu_A          164 ----QSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPH  239 (271)
T ss_dssp             ----SCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCCHH
T ss_pred             ----cccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCCHH
Confidence                1234578999999999986533344558999999999999999999999998888888887777778888999999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          158 VENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      +.++|.+||+.||++|||+.++++.|+.+.+
T Consensus       240 ~~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          240 VSKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            9999999999999999999999999998754

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.97  E-value=2.2e-31  Score=263.49  Aligned_cols=186  Identities=18%  Similarity=0.224  Sum_probs=150.4

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEE---ccCCcEEEEecCCcccccCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL---NEADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILl---d~~~~vKL~DFGla~~~~~~~   77 (503)
                      |||++|+|.+++.. ....+++.+++.++.||+.||+|||++||+||||||+||++   +.++.+||+|||++.......
T Consensus        84 ~e~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~  162 (296)
T 3uzp_A           84 MELLGPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR  162 (296)
T ss_dssp             EECCCCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred             EEecCCCHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccc
Confidence            79998899999974 45679999999999999999999999999999999999999   478899999999998765432


Q ss_pred             CC----CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHhccCCC--
Q 010713           78 LP----SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS---VDEIYDAVVRRQEIP--  148 (503)
Q Consensus        78 ~~----~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~---~~e~~~~i~~~~~~~--  148 (503)
                      ..    ........||+.|+|||++.+.   .++.++|||||||++|+|++|+.||.+..   ..+.+..+.......  
T Consensus       163 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  239 (296)
T 3uzp_A          163 THQHIPYRENKNLTGTARYASINTHLGI---EQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI  239 (296)
T ss_dssp             TCCBCCCCCSCCCCSCTTTCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred             cccccccccccccccccccCChhhhcCC---CCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch
Confidence            11    1123456799999999999854   58899999999999999999999998643   222333332221111  


Q ss_pred             -CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCc
Q 010713          149 -PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSV  190 (503)
Q Consensus       149 -~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~  190 (503)
                       ..+..+++.+.++|.+||+.||.+|||+.++++.|+.+....
T Consensus       240 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~  282 (296)
T 3uzp_A          240 EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ  282 (296)
T ss_dssp             HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence             133678999999999999999999999999999999876543

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.97  E-value=1.7e-31  Score=265.04  Aligned_cols=181  Identities=19%  Similarity=0.271  Sum_probs=147.8

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++|+|.+++.. ..+.+++.++..++.||+.||+|||++||+||||||+||+++.++.+||+|||++......   .
T Consensus        79 ~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~  154 (288)
T 1ob3_A           79 FEHLDQDLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP---V  154 (288)
T ss_dssp             EECCSEEHHHHHHT-STTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred             EEecCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCcc---c
Confidence            79999999999974 4567999999999999999999999999999999999999999999999999998765321   2


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------  148 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~------------  148 (503)
                      .......+|+.|+|||++.+.  ..++.++|||||||++|+|++|..||.+.+..+....+......+            
T Consensus       155 ~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (288)
T 1ob3_A          155 RKYTHEIVTLWYRAPDVLMGS--KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP  232 (288)
T ss_dssp             -------CCCTTCCHHHHTTC--CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred             cccccccccccccCchheeCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccc
Confidence            223345789999999998743  257899999999999999999999999988777666654421111            


Q ss_pred             ---------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          149 ---------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       149 ---------------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                                     .....+++++.+||.+||+.||++|||+.|+++      ++|+..
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~------hp~f~~  286 (288)
T 1ob3_A          233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE------HAYFKE  286 (288)
T ss_dssp             TCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT------SGGGGC
T ss_pred             ccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc------Ccchhh
Confidence                           112457899999999999999999999999998      888764

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.97  E-value=1.3e-31  Score=268.17  Aligned_cols=177  Identities=21%  Similarity=0.304  Sum_probs=151.5

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+ |+|.+++..   ..+++.++..++.|++.||+|||++||+||||||+|||++.++.+||+|||++......   
T Consensus        96 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---  169 (297)
T 3fxz_A           96 MEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE---  169 (297)
T ss_dssp             EECCTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCST---
T ss_pred             EECCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCc---
Confidence            79997 599999964   46999999999999999999999999999999999999999999999999998765432   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-CCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-EIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~-~~~~~~~~~s~~l  158 (503)
                      ........||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.+.......+.... .....+..+++.+
T Consensus       170 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (297)
T 3fxz_A          170 QSKRSTMVGTPYWMAPEVVTRK---AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIF  246 (297)
T ss_dssp             TCCBCCCCSCGGGCCHHHHHCS---CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHH
T ss_pred             ccccCCccCCcCccChhhhcCC---CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHH
Confidence            2233456799999999999754   68899999999999999999999999888776665555433 3344567889999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      .+||.+||+.||++|||+.|+++      ++|+.
T Consensus       247 ~~li~~~l~~dp~~Rps~~ell~------h~~~~  274 (297)
T 3fxz_A          247 RDFLNRCLEMDVEKRGSAKELLQ------HQFLK  274 (297)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHTT------CGGGG
T ss_pred             HHHHHHHccCChhHCcCHHHHhh------Chhhc
Confidence            99999999999999999999998      77765

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.97  E-value=2e-31  Score=290.09  Aligned_cols=198  Identities=20%  Similarity=0.339  Sum_probs=167.7

Q ss_pred             CcCCC-CCHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCC
Q 010713            1 MKFYE-GSVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~--~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~   77 (503)
                      |||++ |+|.+++....  ...+++..++.++.||+.||+|||++||+||||||+|||++.++++||+|||++...... 
T Consensus       264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~-  342 (543)
T 3c4z_A          264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG-  342 (543)
T ss_dssp             ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT-
T ss_pred             EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCC-
Confidence            79998 59999987543  457999999999999999999999999999999999999999999999999999875432 


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCC----ChHHHHHHHHhccCCCCCCCC
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR----SVDEIYDAVVRRQEIPPIPSG  153 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~----~~~e~~~~i~~~~~~~~~~~~  153 (503)
                        .......+||+.|+|||++.+.   .++.++|+|||||++|+|++|..||.+.    ...++...+..  ....++..
T Consensus       343 --~~~~~~~~GT~~Y~APE~l~~~---~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~--~~~~~p~~  415 (543)
T 3c4z_A          343 --QTKTKGYAGTPGFMAPELLLGE---EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE--QAVTYPDK  415 (543)
T ss_dssp             --CCCBCCCCSCTTTSCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHH--CCCCCCTT
T ss_pred             --CcccccccCCccccChhhhcCC---CCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhh--cccCCCcc
Confidence              1122345899999999999854   6889999999999999999999999875    34555555554  34456788


Q ss_pred             CcHHHHHHHHHhhhcCCCCCCCH-----HHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCC
Q 010713          154 LPPAVENVLLGCFEYDLRSRPLM-----TDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGY  212 (503)
Q Consensus       154 ~s~~l~~LI~~cL~~DP~~RPS~-----~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~  212 (503)
                      +++.+.+||.+||+.||.+||++     .++++      |+|+...+|..+..+...+|..|..
T Consensus       416 ~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~------Hpff~~i~w~~l~~~~~~pp~~P~~  473 (543)
T 3c4z_A          416 FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT------HPLFRDISWRQLEAGMLTPPFVPDS  473 (543)
T ss_dssp             SCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT------SGGGTTCCHHHHHTTCSCCSCCCCS
T ss_pred             cCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc------CccccCCCHHHHHcCCCCCCCCCCc
Confidence            99999999999999999999965     67776      9999999999888888888877754

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.97  E-value=3.8e-31  Score=267.83  Aligned_cols=192  Identities=18%  Similarity=0.258  Sum_probs=153.3

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCc-----EEEEecCCcccccC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR-----AVLGDVGIPHLLLG   75 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~-----vKL~DFGla~~~~~   75 (503)
                      |||++|+|.+++.. ....+++.+++.++.||+.||+|||++||+||||||+|||++.++.     +||+|||++.....
T Consensus        84 ~e~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~  162 (330)
T 2izr_A           84 LELLGPSLEDLFDL-CDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYID  162 (330)
T ss_dssp             EECCCCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBC
T ss_pred             EEeCCCCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeec
Confidence            79998899999975 3578999999999999999999999999999999999999998887     99999999987543


Q ss_pred             CCCC----CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHhccCCC
Q 010713           76 IPLP----SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS---VDEIYDAVVRRQEIP  148 (503)
Q Consensus        76 ~~~~----~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~---~~e~~~~i~~~~~~~  148 (503)
                      ....    ........||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+..   ..+.+..+.......
T Consensus       163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~  239 (330)
T 2izr_A          163 PETKKHIPYREHKSLTGTARYMSINTHLGK---EQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRAT  239 (330)
T ss_dssp             TTTCCBCCCCCCCCCCSCTTTCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHS
T ss_pred             CCCCccccccccCCcCCCccccChHHHcCC---CCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccC
Confidence            2211    1123466899999999999854   68899999999999999999999998743   334444443322111


Q ss_pred             C---CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCc----CCCCCCC
Q 010713          149 P---IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSV----HSDGGWT  197 (503)
Q Consensus       149 ~---~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~----~~~~~w~  197 (503)
                      +   ....++ ++.++|..||+.||.+||++.++++.|+.+....    ....+|.
T Consensus       240 ~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~  294 (330)
T 2izr_A          240 PIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDWI  294 (330)
T ss_dssp             CHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCCSCCCTTT
T ss_pred             CHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCccCC
Confidence            1   123355 9999999999999999999999999998775532    3456676

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.97  E-value=2.7e-31  Score=274.80  Aligned_cols=183  Identities=22%  Similarity=0.324  Sum_probs=157.7

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC----cEEEEecCCcccccC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD----RAVLGDVGIPHLLLG   75 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~----~vKL~DFGla~~~~~   75 (503)
                      ||||+ |+|.+++.  ..+.+++.++..++.||+.||+|||++||+||||||+|||++.++    .+||+|||++.....
T Consensus        94 ~e~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~  171 (361)
T 2yab_A           94 LELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED  171 (361)
T ss_dssp             EECCCSCBHHHHHT--TCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCT
T ss_pred             EEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCC
Confidence            79997 69999996  456899999999999999999999999999999999999998776    799999999987643


Q ss_pred             CCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC--CCCC
Q 010713           76 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--IPSG  153 (503)
Q Consensus        76 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~--~~~~  153 (503)
                          .......+||+.|+|||++.+.   .++.++|+|||||++|+|++|..||.+.+..+.+..+.......+  ....
T Consensus       172 ----~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~  244 (361)
T 2yab_A          172 ----GVEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQ  244 (361)
T ss_dssp             ----TCCCCCCCSCGGGCCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTT
T ss_pred             ----CCccccCCCCccEECchHHcCC---CCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccC
Confidence                2233456899999999999754   688999999999999999999999999988888887765433221  2367


Q ss_pred             CcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCC
Q 010713          154 LPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTG  198 (503)
Q Consensus       154 ~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~  198 (503)
                      +++.+.+||.+||..||.+|||+.|+++      |+|+...+|..
T Consensus       245 ~s~~~~~li~~~L~~dP~~R~t~~e~l~------hp~~~~~~~~~  283 (361)
T 2yab_A          245 TSELAKDFIRKLLVKETRKRLTIQEALR------HPWITPVDTQQ  283 (361)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHHT------STTTSCSSHHH
T ss_pred             CCHHHHHHHHHHCCCChhHCcCHHHHhc------CcCcCCCchhh
Confidence            8999999999999999999999999998      99988777643

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.97  E-value=1.6e-31  Score=270.99  Aligned_cols=185  Identities=22%  Similarity=0.245  Sum_probs=148.9

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEc-----cCCcEEEEecCCcccccC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN-----EADRAVLGDVGIPHLLLG   75 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld-----~~~~vKL~DFGla~~~~~   75 (503)
                      |||++|+|.+++.  ....+++.+++.++.||+.||+|||++||+||||||+|||++     .++.+||+|||++.....
T Consensus       112 ~e~~~~~L~~~~~--~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~  189 (329)
T 3gbz_A          112 FEYAENDLKKYMD--KNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI  189 (329)
T ss_dssp             EECCSEEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-
T ss_pred             EecCCCCHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCC
Confidence            7999999999997  456799999999999999999999999999999999999994     445699999999976543


Q ss_pred             CCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCC----
Q 010713           76 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP----  151 (503)
Q Consensus        76 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~----  151 (503)
                      .   ........+|+.|+|||++.+.  ..++.++|||||||++|+|++|..||.+....+....+......+...    
T Consensus       190 ~---~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (329)
T 3gbz_A          190 P---IRQFTHEIITLWYRPPEILLGS--RHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPG  264 (329)
T ss_dssp             -------------CCTTCCHHHHTTC--CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTT
T ss_pred             c---ccccCCCcCCccccCHHHhcCC--CCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhh
Confidence            1   2233455789999999999753  257899999999999999999999999988877777665432221110    


Q ss_pred             ------------------------CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCC
Q 010713          152 ------------------------SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTG  198 (503)
Q Consensus       152 ------------------------~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~  198 (503)
                                              ..+++++.+||.+||+.||.+|||+.|+++      |+|+...+|.+
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~------hp~f~~~~~~P  329 (329)
T 3gbz_A          265 VTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE------HPYFSHNDFDP  329 (329)
T ss_dssp             GGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT------SGGGSSSCSCC
T ss_pred             hhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC------CcccCCCCCCC
Confidence                                    126799999999999999999999999998      99999988853

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=2e-31  Score=276.39  Aligned_cols=182  Identities=20%  Similarity=0.261  Sum_probs=149.8

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCC--
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL--   78 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~--   78 (503)
                      ||||+|+|.+++..   ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......  
T Consensus        90 ~e~~~~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  166 (388)
T 3oz6_A           90 FDYMETDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVT  166 (388)
T ss_dssp             EECCSEEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCC
T ss_pred             ecccCcCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCccccccccccccc
Confidence            79999999999963   5799999999999999999999999999999999999999999999999999976532110  


Q ss_pred             ----------------CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 010713           79 ----------------PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV  142 (503)
Q Consensus        79 ----------------~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~  142 (503)
                                      ........+||+.|+|||++.+.  ..++.++|||||||++|+|++|.+||.+.+..+.+..+.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~  244 (388)
T 3oz6_A          167 NNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGS--TKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERII  244 (388)
T ss_dssp             CCGGGCCC---------------CCCGGGGCCHHHHTTC--CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             ccccccccccccccccccccccCCcccCCcCCHHHhcCC--CCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence                            11123446899999999999752  368899999999999999999999999988887777765


Q ss_pred             hccCCCC---------------------------------------------CCCCCcHHHHHHHHHhhhcCCCCCCCHH
Q 010713          143 RRQEIPP---------------------------------------------IPSGLPPAVENVLLGCFEYDLRSRPLMT  177 (503)
Q Consensus       143 ~~~~~~~---------------------------------------------~~~~~s~~l~~LI~~cL~~DP~~RPS~~  177 (503)
                      .....+.                                             .+..+++++.+||.+||+.||.+|||+.
T Consensus       245 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~  324 (388)
T 3oz6_A          245 GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISAN  324 (388)
T ss_dssp             HHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred             HhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHH
Confidence            4322221                                             1126789999999999999999999999


Q ss_pred             HHHHHHHhhccCcCCC
Q 010713          178 DILRVFKSSQNSVHSD  193 (503)
Q Consensus       178 elL~~L~~i~~~~~~~  193 (503)
                      |+++      |+|+..
T Consensus       325 e~l~------Hp~~~~  334 (388)
T 3oz6_A          325 DALK------HPFVSI  334 (388)
T ss_dssp             HHTT------STTTTT
T ss_pred             HHhC------CHHHHH
Confidence            9998      888654

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.97  E-value=1.8e-31  Score=270.76  Aligned_cols=185  Identities=20%  Similarity=0.337  Sum_probs=155.6

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.. ....+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.........
T Consensus       129 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  207 (325)
T 3kul_A          129 TEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA  207 (325)
T ss_dssp             EECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----C
T ss_pred             eeCCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCccc
Confidence            799975 99999964 4567999999999999999999999999999999999999999999999999999876443222


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........+|+.|+|||++.+.   .++.++|||||||++|+|++ |..||.+....+....+... ...+.+..+++.+
T Consensus       208 ~~~~~~~~~t~~y~aPE~~~~~---~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l  283 (325)
T 3kul_A          208 AYTTTGGKIPIRWTAPEAIAFR---TFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG-YRLPAPMGCPHAL  283 (325)
T ss_dssp             CEECC---CCGGGSCHHHHHHC---EECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTT-CCCCCCTTCCHHH
T ss_pred             eeeccCCCCcccccCHhHhcCC---CCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC-CCCCCCCCcCHHH
Confidence            2222334567789999999743   68889999999999999999 99999998888887776554 4556778899999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccCc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNSV  190 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~  190 (503)
                      .+||.+||..||.+|||+.++++.|+.+....
T Consensus       284 ~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~  315 (325)
T 3kul_A          284 HQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP  315 (325)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence            99999999999999999999999999987543

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.97  E-value=5.5e-31  Score=265.77  Aligned_cols=186  Identities=22%  Similarity=0.273  Sum_probs=153.9

Q ss_pred             CcCCCCCHHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCC
Q 010713            1 MKFYEGSVGDRMAQLK----GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~----~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~   76 (503)
                      |||++|+|.+++....    ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus        82 ~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  161 (317)
T 2pmi_A           82 FEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP  161 (317)
T ss_dssp             EECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSC
T ss_pred             EEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCC
Confidence            7999999999997642    246999999999999999999999999999999999999999999999999999775431


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC--------
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP--------  148 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~--------  148 (503)
                         ........+|+.|+|||++.+.  ..++.++|||||||++|+|++|..||.+.+..+....+......+        
T Consensus       162 ---~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  236 (317)
T 2pmi_A          162 ---VNTFSSEVVTLWYRAPDVLMGS--RTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSV  236 (317)
T ss_dssp             ---CCCCCCCCSCCTTCCHHHHTTC--CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGG
T ss_pred             ---cccCCCCcccccccCchHhhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhh
Confidence               2233456789999999998743  257899999999999999999999999988877776665421111        


Q ss_pred             ------------------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCC
Q 010713          149 ------------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWT  197 (503)
Q Consensus       149 ------------------------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~  197 (503)
                                              ..+..++.++.+||.+||+.||++|||+.|+++      ++|+....+.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~------hp~f~~~~~~  303 (317)
T 2pmi_A          237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH------HPWFAEYYHH  303 (317)
T ss_dssp             GGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT------SGGGGGGCC-
T ss_pred             hhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC------Chhhhcccch
Confidence                                    112357889999999999999999999999998      8888765543

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.97  E-value=7.3e-31  Score=263.72  Aligned_cols=184  Identities=17%  Similarity=0.259  Sum_probs=156.2

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++|+|.+++.......+++.+++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++.....    .
T Consensus        98 ~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~----~  173 (326)
T 1blx_A           98 FEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF----Q  173 (326)
T ss_dssp             EECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCG----G
T ss_pred             EecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcccccccC----C
Confidence            789999999999876666799999999999999999999999999999999999999999999999999876532    1


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------  148 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~------------  148 (503)
                      .......+|+.|+|||++.+.   .++.++|||||||++|+|++|..||.+....+....+......+            
T Consensus       174 ~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  250 (326)
T 1blx_A          174 MALTSVVVTLWYRAPEVLLQS---SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP  250 (326)
T ss_dssp             GGGCCCCCCCTTCCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSC
T ss_pred             CCccccccccceeCHHHHhcC---CCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccc
Confidence            123356789999999999754   68899999999999999999999999988877776665421111            


Q ss_pred             -------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCC
Q 010713          149 -------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWT  197 (503)
Q Consensus       149 -------------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~  197 (503)
                                   .+...++..+.+||.+||+.||.+||++.++++      ++|+....+.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~------hp~~~~~~~~  306 (326)
T 1blx_A          251 RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS------HPYFQDLERC  306 (326)
T ss_dssp             GGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT------SGGGTTCCCC
T ss_pred             hhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc------Cccccccchh
Confidence                         123568899999999999999999999999998      8888776554

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.97  E-value=6.4e-31  Score=261.08  Aligned_cols=181  Identities=20%  Similarity=0.299  Sum_probs=149.8

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++|+|.+.+.. ..+.+++.++..++.||+.||+|||++||+||||||+||+++.++.+||+|||++.....   ..
T Consensus        80 ~e~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~---~~  155 (292)
T 3o0g_A           80 FEFCDQDLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGI---PV  155 (292)
T ss_dssp             EECCSEEHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCS---CC
T ss_pred             EecCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCC---cc
Confidence            79999999888865 467899999999999999999999999999999999999999999999999999976543   22


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCC-CCCCChHHHHHHHHhccCCC-----------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP-RCGRSVDEIYDAVVRRQEIP-----------  148 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~P-f~~~~~~e~~~~i~~~~~~~-----------  148 (503)
                      .......+|+.|+|||++.+.  ..++.++|||||||++|+|++|..| |.+.+..+....+......+           
T Consensus       156 ~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  233 (292)
T 3o0g_A          156 RCYSAEVVTLWYRPPDVLFGA--KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL  233 (292)
T ss_dssp             SCCCSCCSCGGGCCHHHHTTC--SCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGS
T ss_pred             ccccCCccccCCcChHHHcCC--CCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccc
Confidence            333456789999999999753  2478999999999999999988777 56666666666654422111           


Q ss_pred             ----------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          149 ----------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       149 ----------------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                                      .....+++.+++||.+||+.||++|||+.|+++      |+|+.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~------hp~f~~  288 (292)
T 3o0g_A          234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ------HPYFSD  288 (292)
T ss_dssp             TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT------SGGGTT
T ss_pred             ccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc------Cccccc
Confidence                            122357899999999999999999999999998      888865

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.97  E-value=5.3e-31  Score=260.35  Aligned_cols=178  Identities=26%  Similarity=0.427  Sum_probs=151.1

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecccCCCcEEEccCCc-----EEEEecCCccc
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG--ILVLNLKPFNFILNEADR-----AVLGDVGIPHL   72 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~g--IvHrDLKP~NILld~~~~-----vKL~DFGla~~   72 (503)
                      |||++ |+|.+.+.. ....+++..++.++.|++.||+|||++|  |+||||||+||+++.++.     +||+|||++..
T Consensus       100 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~  178 (287)
T 4f0f_A          100 MEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ  178 (287)
T ss_dssp             EECCTTCBHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBC
T ss_pred             EEecCCCCHHHHHhc-ccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCcccc
Confidence            79998 699998864 4567999999999999999999999999  999999999999988776     99999999875


Q ss_pred             ccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHhccCCCCC
Q 010713           73 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI--YDAVVRRQEIPPI  150 (503)
Q Consensus        73 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~--~~~i~~~~~~~~~  150 (503)
                      ...      ......||+.|+|||++... ...++.++|||||||++|+|++|..||........  ...+......+.+
T Consensus       179 ~~~------~~~~~~g~~~y~aPE~~~~~-~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  251 (287)
T 4f0f_A          179 SVH------SVSGLLGNFQWMAPETIGAE-EESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTI  251 (287)
T ss_dssp             CSS------CEECCCCCCTTSCGGGSSCS-SCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCC
T ss_pred             ccc------cccccCCCccccCchhhccC-CCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCC
Confidence            422      23356789999999998533 33578899999999999999999999987554433  4455555666778


Q ss_pred             CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhh
Q 010713          151 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSS  186 (503)
Q Consensus       151 ~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i  186 (503)
                      +..+++.+.++|.+||+.||.+|||+.++++.|+++
T Consensus       252 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          252 PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            889999999999999999999999999999999863

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=2.3e-31  Score=273.46  Aligned_cols=199  Identities=20%  Similarity=0.319  Sum_probs=163.2

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++..  ...+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......  
T Consensus       138 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~--  213 (355)
T 1vzo_A          138 LDYINGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE--  213 (355)
T ss_dssp             ECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGG--
T ss_pred             eecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccCC--
Confidence            799985 99999974  4579999999999999999999999999999999999999999999999999987653211  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCC----ChHHHHHHHHhccCCCCCCCCCc
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR----SVDEIYDAVVRRQEIPPIPSGLP  155 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~----~~~e~~~~i~~~~~~~~~~~~~s  155 (503)
                      ........||+.|+|||++.+. ...++.++|||||||++|+|++|..||...    ....+...+..  ..+.++..++
T Consensus       214 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  290 (355)
T 1vzo_A          214 TERAYDFCGTIEYMAPDIVRGG-DSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK--SEPPYPQEMS  290 (355)
T ss_dssp             GGGGCGGGSCCTTCCHHHHTTC-C---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH--CCCCCCTTSC
T ss_pred             CCcccCcccCcCccChhhhcCC-CCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhc--cCCCCCcccC
Confidence            1122345799999999999753 235788999999999999999999999753    23334444433  3456778899


Q ss_pred             HHHHHHHHHhhhcCCCCCC-----CHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCC
Q 010713          156 PAVENVLLGCFEYDLRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGY  212 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RP-----S~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~  212 (503)
                      ..+.+||.+||+.||.+||     ++.++++      ++|+...+|..+..+..++|..|..
T Consensus       291 ~~~~~li~~~L~~dP~~R~~~~~~s~~ell~------h~~f~~~~~~~l~~~~~~~p~~p~~  346 (355)
T 1vzo_A          291 ALAKDLIQRLLMKDPKKRLGCGPRDADEIKE------HLFFQKINWDDLAAKKVPAPFKPVI  346 (355)
T ss_dssp             HHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT------SGGGTTCCHHHHHTTCSCCSCCCCC
T ss_pred             HHHHHHHHHHhhhCHHHhcCCCCCCHHHHHc------CcchhcCChhHhhhccCCCCCCCcc
Confidence            9999999999999999999     9999998      9999999998888777777776653

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.97  E-value=1.8e-31  Score=292.00  Aligned_cols=197  Identities=20%  Similarity=0.339  Sum_probs=167.5

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++++||+|||++.....    
T Consensus       263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~----  338 (576)
T 2acx_A          263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE----  338 (576)
T ss_dssp             ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT----
T ss_pred             EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceeccc----
Confidence            79997 5999999754455699999999999999999999999999999999999999999999999999987643    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHHhccCCCCCCCCCc
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS----VDEIYDAVVRRQEIPPIPSGLP  155 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~----~~e~~~~i~~~~~~~~~~~~~s  155 (503)
                      .......+||+.|+|||++.+.   .++.++|+|||||++|+|++|..||.+..    ..++...+..  ....++..++
T Consensus       339 ~~~~~~~~GT~~Y~APEvl~~~---~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~--~~~~~p~~~s  413 (576)
T 2acx_A          339 GQTIKGRVGTVGYMAPEVVKNE---RYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE--VPEEYSERFS  413 (576)
T ss_dssp             TCCEECCCSCGGGCCHHHHTTC---EESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH--CCCCCCTTSC
T ss_pred             CccccccCCCccccCHHHHcCC---CCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc--ccccCCccCC
Confidence            1222345899999999999854   68899999999999999999999998753    3444444443  3455678899


Q ss_pred             HHHHHHHHHhhhcCCCCCC-----CHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCC
Q 010713          156 PAVENVLLGCFEYDLRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGY  212 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RP-----S~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~  212 (503)
                      +++.+||.+||+.||.+||     ++.|+++      |+|+...+|..+..+..++|..|..
T Consensus       414 ~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~------HpfF~~i~w~~l~~~~~~pp~~p~~  469 (576)
T 2acx_A          414 PQARSLCSQLLCKDPAERLGCRGGSAREVKE------HPLFKKLNFKRLGAGMLEPPFKPDP  469 (576)
T ss_dssp             HHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT------SGGGTTCCHHHHHTTCSCCSCCCCC
T ss_pred             HHHHHHHHHhccCCHHHcCCCCCCCHHHHHh------ChhhccCCHHHHhcCCCCCCCCCCc
Confidence            9999999999999999999     7888888      9999999999888777777777643

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.97  E-value=1.3e-31  Score=271.60  Aligned_cols=183  Identities=18%  Similarity=0.324  Sum_probs=152.9

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||+. |+|.+++.. ....+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... 
T Consensus        95 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~-  172 (327)
T 3poz_A           95 TQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK-  172 (327)
T ss_dssp             EECCTTCBHHHHHHH-STTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-
T ss_pred             EEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCcc-
Confidence            46777 699999975 456799999999999999999999999999999999999999999999999999987643221 


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........+|+.|+|||++.+.   .++.++|||||||++|+|++ |..||.+....+....+.. ....+.+..++..+
T Consensus       173 ~~~~~~~~~t~~y~aPE~~~~~---~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  248 (327)
T 3poz_A          173 EYHAEGGKVPIKWMALESILHR---IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK-GERLPQPPICTIDV  248 (327)
T ss_dssp             -------CCCGGGSCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT-TCCCCCCTTBCHHH
T ss_pred             cccccCCCccccccChHHhccC---CCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHc-CCCCCCCccCCHHH
Confidence            1122344568899999999743   68999999999999999999 9999998887776655543 44556678899999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      .+++.+||+.||.+||++.++++.|+.+...
T Consensus       249 ~~li~~~l~~~p~~Rps~~ell~~l~~~~~~  279 (327)
T 3poz_A          249 YMIMVKCWMIDADSRPKFRELIIEFSKMARD  279 (327)
T ss_dssp             HHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred             HHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence            9999999999999999999999999987654

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.97  E-value=1.5e-31  Score=266.44  Aligned_cols=175  Identities=19%  Similarity=0.280  Sum_probs=147.4

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++   ....+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......   
T Consensus       117 ~e~~~~~~l~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---  190 (298)
T 2zv2_A          117 FELVNQGPVMEVP---TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGS---  190 (298)
T ss_dssp             EECCTTCBSCCSS---CSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECSSS---
T ss_pred             EecCCCCcHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCCEEEecCCCccccccc---
Confidence            789985 777654   4568999999999999999999999999999999999999999999999999999775432   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........||+.|+|||++.+.....++.++|||||||++|+|++|..||.+.........+.......+....+++.+.
T Consensus       191 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  270 (298)
T 2zv2_A          191 DALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLK  270 (298)
T ss_dssp             SCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSSSCCCHHHH
T ss_pred             cccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCCCccccCHHHH
Confidence            11223567999999999997542222467899999999999999999999988887777776665444444567999999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 010713          160 NVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +||.+||+.||++|||+.|+++
T Consensus       271 ~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          271 DLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             HHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHHHhhcChhhCCCHHHHhc
Confidence            9999999999999999999987

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.97  E-value=2.4e-31  Score=269.57  Aligned_cols=189  Identities=21%  Similarity=0.302  Sum_probs=156.3

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEcc---CCcEEEEecCCcccccCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE---ADRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~---~~~vKL~DFGla~~~~~~   76 (503)
                      |||++| +|.+++.......+++.+++.++.||+.||+|||++||+||||||+||+++.   ++.+||+|||++..... 
T Consensus       108 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~-  186 (327)
T 3lm5_A          108 LEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH-  186 (327)
T ss_dssp             EECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---
T ss_pred             EEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCC-
Confidence            789986 8999886544578999999999999999999999999999999999999987   78999999999987643 


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC--CCCCCCC
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI--PPIPSGL  154 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~--~~~~~~~  154 (503)
                         ........||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+....+....+......  ......+
T Consensus       187 ---~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  260 (327)
T 3lm5_A          187 ---ACELREIMGTPEYLAPEILNYD---PITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSV  260 (327)
T ss_dssp             ----------CCCGGGCCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTS
T ss_pred             ---ccccccccCCcCccCCeeecCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhccc
Confidence               2223456799999999999744   6889999999999999999999999998888877776654332  2334678


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCCCCCc
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGHGSR  202 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~~~~~  202 (503)
                      ++.+.+||.+||+.||.+|||+.++++      ++|+...+|......
T Consensus       261 ~~~~~~li~~~L~~dP~~Rpt~~~ll~------h~~~~~~~~~~~~~~  302 (327)
T 3lm5_A          261 SQLATDFIQSLLVKNPEKRPTAEICLS------HSWLQQWDFENLFHP  302 (327)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHTT------CGGGCCCCTTCC---
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHhC------CHhhcccccccccCc
Confidence            999999999999999999999999988      999999888776433

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.97  E-value=6.5e-31  Score=266.72  Aligned_cols=181  Identities=22%  Similarity=0.320  Sum_probs=154.7

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC----cEEEEecCCcccccC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD----RAVLGDVGIPHLLLG   75 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~----~vKL~DFGla~~~~~   75 (503)
                      ||||+ |+|.+++.  ....+++.+++.++.||+.||+|||++||+||||||+||+++.++    .+||+|||++.....
T Consensus        93 ~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~  170 (326)
T 2y0a_A           93 LELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF  170 (326)
T ss_dssp             EECCCSCBHHHHHT--TSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCT
T ss_pred             EEcCCCCCHHHHHH--hcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCC
Confidence            79997 59999996  456799999999999999999999999999999999999998887    899999999987643


Q ss_pred             CCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC--CCCC
Q 010713           76 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--IPSG  153 (503)
Q Consensus        76 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~--~~~~  153 (503)
                          ........||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+....+....+.......+  ....
T Consensus       171 ----~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (326)
T 2y0a_A          171 ----GNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN  243 (326)
T ss_dssp             ----TSCCCCCCSCTTTCCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTT
T ss_pred             ----CCccccccCCcCcCCceeecCC---CCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCcccccc
Confidence                2233456799999999999744   688999999999999999999999999888887777665432221  2257


Q ss_pred             CcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCC
Q 010713          154 LPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGW  196 (503)
Q Consensus       154 ~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w  196 (503)
                      +++.+.+||.+||+.||.+|||+.++++      ++|+...++
T Consensus       244 ~~~~~~~li~~~L~~dP~~Rpt~~e~l~------hp~~~~~~~  280 (326)
T 2y0a_A          244 TSALAKDFIRRLLVKDPKKRMTIQDSLQ------HPWIKPKDT  280 (326)
T ss_dssp             SCHHHHHHHHHHSCSSGGGSCCHHHHHH------STTTSCCSH
T ss_pred             CCHHHHHHHHHHccCChhhCCCHHHHhc------CCCccCCcc
Confidence            8999999999999999999999999998      888876554

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.97  E-value=5.3e-31  Score=261.62  Aligned_cols=186  Identities=23%  Similarity=0.363  Sum_probs=140.5

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+ |+|.+++.. ....+++.+++.++.||+.||+|||++||+||||||+||+++.++.++|+|||++....... .
T Consensus        98 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~  175 (289)
T 3og7_A           98 TQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS-G  175 (289)
T ss_dssp             EECCCEEEHHHHHTT-C---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-----------
T ss_pred             EEecCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceecccccccc-c
Confidence            78998 599999864 45679999999999999999999999999999999999999999999999999987543211 1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-CCC---CCCCCCc
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-EIP---PIPSGLP  155 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~-~~~---~~~~~~s  155 (503)
                      ........||+.|+|||++.......++.++||||||+++|+|++|..||.+....+......... ..+   .....++
T Consensus       176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (289)
T 3og7_A          176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCP  255 (289)
T ss_dssp             --------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSC
T ss_pred             cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCC
Confidence            222345678999999999874434568889999999999999999999998866555444444332 222   2345789


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          156 PAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      +.+.+||.+||+.||.+|||+.++++.|+++..
T Consensus       256 ~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          256 KRMKRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence            999999999999999999999999999998753

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.97  E-value=2.9e-31  Score=268.38  Aligned_cols=183  Identities=21%  Similarity=0.365  Sum_probs=153.2

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.. ..+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++........ 
T Consensus        93 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~-  170 (325)
T 3kex_A           93 TQYLPLGSLLDHVRQ-HRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK-  170 (325)
T ss_dssp             EECCTTCBSHHHHHS-SGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTT-
T ss_pred             EEeCCCCCHHHHHHH-ccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCcccc-
Confidence            68888 699999974 345799999999999999999999999999999999999999999999999999987643221 


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........++..|+|||++.+.   .++.++|||||||++|+|++ |..||.+....+....+.. ......+..++.++
T Consensus       171 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  246 (325)
T 3kex_A          171 QLLYSEAKTPIKWMALESIHFG---KYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEK-GERLAQPQICTIDV  246 (325)
T ss_dssp             CCC-----CCTTTSCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHT-TCBCCCCTTBCTTT
T ss_pred             cccccCCCCcccccChHHhccC---CCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHc-CCCCCCCCcCcHHH
Confidence            2223445678899999999743   68899999999999999999 9999998887777666544 34555677789999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      .++|.+||+.||.+||++.++++.|+.+...
T Consensus       247 ~~li~~~l~~dp~~Rps~~el~~~l~~~~~~  277 (325)
T 3kex_A          247 YMVMVKCWMIDENIRPTFKELANEFTRMARD  277 (325)
T ss_dssp             THHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            9999999999999999999999999988653

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.97  E-value=8.6e-31  Score=271.01  Aligned_cols=183  Identities=16%  Similarity=0.295  Sum_probs=156.0

Q ss_pred             CcCCCC-CHHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEE
Q 010713            1 MKFYEG-SVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG   65 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~--------------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~   65 (503)
                      |||++| +|.+++....              ...+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+
T Consensus       166 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~  245 (370)
T 2psq_A          166 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIA  245 (370)
T ss_dssp             EECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEEC
T ss_pred             EEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEEc
Confidence            799985 9999997642              2468999999999999999999999999999999999999999999999


Q ss_pred             ecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc
Q 010713           66 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR  144 (503)
Q Consensus        66 DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~  144 (503)
                      |||++........ ........+|+.|+|||++.+.   .++.++|||||||++|+|++ |..||.+....+....+.. 
T Consensus       246 DFG~a~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~---~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~~-  320 (370)
T 2psq_A          246 DFGLARDINNIDY-YKKTTNGRLPVKWMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE-  320 (370)
T ss_dssp             CCSSCEETTCCCT-TCTTTTTTSCGGGCCHHHHHTC---CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT-
T ss_pred             cccCCcccCcccc-eecccCCCcccceECHhHhcCC---CCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhc-
Confidence            9999986543221 1222345678899999999744   68999999999999999999 9999999888777766544 


Q ss_pred             cCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       145 ~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      ...+..+..++.++.++|.+||+.||.+||++.|+++.|+.+..
T Consensus       321 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~  364 (370)
T 2psq_A          321 GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT  364 (370)
T ss_dssp             TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            34566778899999999999999999999999999999998764

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.97  E-value=6.1e-31  Score=257.46  Aligned_cols=175  Identities=25%  Similarity=0.404  Sum_probs=147.0

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---CeecccCCCcEEEcc--------CCcEEEEecC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG---ILVLNLKPFNFILNE--------ADRAVLGDVG   68 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~g---IvHrDLKP~NILld~--------~~~vKL~DFG   68 (503)
                      |||++| +|.+++   ....+++.+++.++.|++.||+|||++|   |+||||||+||+++.        ++.++|+|||
T Consensus        85 ~e~~~~~~L~~~~---~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg  161 (271)
T 3dtc_A           85 MEFARGGPLNRVL---SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG  161 (271)
T ss_dssp             EECCTTEEHHHHH---TSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred             EEcCCCCCHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence            789985 888888   4568999999999999999999999999   899999999999986        6789999999


Q ss_pred             CcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC
Q 010713           69 IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP  148 (503)
Q Consensus        69 la~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~  148 (503)
                      ++.....     .......||+.|+|||.+.+.   .++.++||||||+++|+|++|..||.+.........+.......
T Consensus       162 ~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  233 (271)
T 3dtc_A          162 LAREWHR-----TTKMSAAGAYAWMAPEVIRAS---MFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLAL  233 (271)
T ss_dssp             C------------------CCGGGSCHHHHHHC---CCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCC
T ss_pred             ccccccc-----ccccCCCCccceeCHHHhccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCC
Confidence            9876533     122345789999999998743   68899999999999999999999999988888777777766677


Q ss_pred             CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhh
Q 010713          149 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSS  186 (503)
Q Consensus       149 ~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i  186 (503)
                      +.+..+++.+.++|.+||+.||.+|||+.++++.|+++
T Consensus       234 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          234 PIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             CCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            78889999999999999999999999999999999753

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.97  E-value=2.5e-31  Score=271.02  Aligned_cols=165  Identities=20%  Similarity=0.357  Sum_probs=141.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCCCCCCCccCCCCCCCccccC
Q 010713           20 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQ   99 (503)
Q Consensus        20 Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~   99 (503)
                      +++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++....... .........+|+.|+|||++.
T Consensus       190 l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~~~~t~~y~aPE~~~  268 (359)
T 3vhe_A          190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP-DYVRKGDARLPLKWMAPETIF  268 (359)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT-TCEEC--CEECGGGCCHHHHH
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccc-cchhccccCCCceeEChhhhc
Confidence            8999999999999999999999999999999999999999999999999997653321 111233456788999999987


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHH
Q 010713          100 PEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTD  178 (503)
Q Consensus       100 ~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~e  178 (503)
                      +.   .++.++|||||||++|+|++ |..||.+....+..............+..+++++.++|.+||+.||.+|||+.+
T Consensus       269 ~~---~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~e  345 (359)
T 3vhe_A          269 DR---VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSE  345 (359)
T ss_dssp             HC---CCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CC---CCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence            43   68899999999999999998 999999877666666666666667778889999999999999999999999999


Q ss_pred             HHHHHHhhcc
Q 010713          179 ILRVFKSSQN  188 (503)
Q Consensus       179 lL~~L~~i~~  188 (503)
                      +++.|+.+..
T Consensus       346 ll~~L~~~~~  355 (359)
T 3vhe_A          346 LVEHLGNLLQ  355 (359)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999998764

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.97  E-value=2.2e-30  Score=274.52  Aligned_cols=193  Identities=17%  Similarity=0.186  Sum_probs=146.7

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC-
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP-   79 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~-   79 (503)
                      |||++|+|.+++.  ....+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++........ 
T Consensus       136 ~e~~~~~L~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~  213 (458)
T 3rp9_A          136 LEIADSDFKKLFR--TPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGN  213 (458)
T ss_dssp             ECCCSEEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCC
T ss_pred             Eeccccchhhhcc--cCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCccccc
Confidence            7899999999996  5677999999999999999999999999999999999999999999999999999875422111 


Q ss_pred             -----------------------CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-----------C
Q 010713           80 -----------------------SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-----------G  125 (503)
Q Consensus        80 -----------------------~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-----------G  125 (503)
                                             .......+||+.|+|||++...  ..++.++|||||||++|||++           |
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~  291 (458)
T 3rp9_A          214 SQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQ--ENYTEAIDVWSIGCIFAELLNMIKENVAYHADR  291 (458)
T ss_dssp             CCCC---------------------------CCCTTCCHHHHTTC--CCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGC
T ss_pred             cccccCccccccccccccccccccccccCCcccccccChHHhhCC--CCCCcHhHHHHHHHHHHHHHHhccccccccccc
Confidence                                   0123456789999999987432  368999999999999999999           6


Q ss_pred             CCCCCCCCh--------------------HHHHHHHHhccCCC-----------------------------CCCCCCcH
Q 010713          126 VQPRCGRSV--------------------DEIYDAVVRRQEIP-----------------------------PIPSGLPP  156 (503)
Q Consensus       126 ~~Pf~~~~~--------------------~e~~~~i~~~~~~~-----------------------------~~~~~~s~  156 (503)
                      .++|.+.+.                    .+....+......+                             .....+++
T Consensus       292 ~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  371 (458)
T 3rp9_A          292 GPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSA  371 (458)
T ss_dssp             CCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCH
T ss_pred             cccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCH
Confidence            777765431                    12222222111110                             01245689


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCCCCCcC
Q 010713          157 AVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGHGSRI  203 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~~~~~~  203 (503)
                      ++.+||.+||..||.+|||+.|+++      |+|+....|...+...
T Consensus       372 ~~~dLl~~mL~~dP~~R~t~~e~L~------Hp~f~~~~~~~~e~~~  412 (458)
T 3rp9_A          372 DAIHLLKRMLVFNPNKRITINECLA------HPFFKEVRIAEVETNA  412 (458)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHH------SGGGTTTCCGGGCCCC
T ss_pred             HHHHHHHHHhccCccccCCHHHHhc------CHhhhhcCCCccCCCC
Confidence            9999999999999999999999999      9999998887765443

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.97  E-value=1.2e-30  Score=260.64  Aligned_cols=183  Identities=23%  Similarity=0.350  Sum_probs=148.7

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++..  .+.+++.+++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++.......  
T Consensus        90 ~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--  165 (294)
T 4eqm_A           90 MEYIEGPTLSEYIES--HGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS--  165 (294)
T ss_dssp             EECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC------
T ss_pred             EeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc--
Confidence            799985 99999974  4579999999999999999999999999999999999999999999999999997654321  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC---CCCCCCcH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP---PIPSGLPP  156 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~---~~~~~~s~  156 (503)
                      ........||+.|+|||++.+.   .++.++||||||+++|+|++|+.||.+....+............   ..+..+++
T Consensus       166 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (294)
T 4eqm_A          166 LTQTNHVLGTVQYFSPEQAKGE---ATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQ  242 (294)
T ss_dssp             ---------CCSSCCHHHHHTC---CCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCH
T ss_pred             ccccCccccCccccCHhHhcCC---CCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCH
Confidence            1223345799999999999754   57889999999999999999999999988777655554432221   23567899


Q ss_pred             HHHHHHHHhhhcCCCCCC-CHHHHHHHHHhhccCc
Q 010713          157 AVENVLLGCFEYDLRSRP-LMTDILRVFKSSQNSV  190 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~RP-S~~elL~~L~~i~~~~  190 (503)
                      .+.++|.+||+.||.+|| ++.++.+.|+.+.+..
T Consensus       243 ~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~  277 (294)
T 4eqm_A          243 SLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN  277 (294)
T ss_dssp             HHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred             HHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence            999999999999999998 8999999998876544

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.97  E-value=3.9e-31  Score=262.65  Aligned_cols=186  Identities=17%  Similarity=0.338  Sum_probs=146.1

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.. ....+++.+++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++.........
T Consensus        92 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  170 (295)
T 3ugc_A           92 MEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEF  170 (295)
T ss_dssp             EECCTTCBHHHHHHH-CGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC--------
T ss_pred             EEeCCCCCHHHHHHh-cccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCcce
Confidence            79997 599999975 3446999999999999999999999999999999999999999999999999999876432222


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChH---------------HHHHHHHhc
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD---------------EIYDAVVRR  144 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~---------------e~~~~i~~~  144 (503)
                      ........++..|+|||.+.+.   .++.++||||||+++|+|++|..||......               .........
T Consensus       171 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (295)
T 3ugc_A          171 FKVKEPGESPIFWYAPESLTES---KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN  247 (295)
T ss_dssp             -----CTTCGGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred             eeeccCCCCccceeCcHHhcCC---CCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhc
Confidence            2223344577789999999744   6889999999999999999999998643211               011122233


Q ss_pred             cCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCc
Q 010713          145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSV  190 (503)
Q Consensus       145 ~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~  190 (503)
                      ....+.+..+++++.+||.+||+.||++|||+.++++.|+.+....
T Consensus       248 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l  293 (295)
T 3ugc_A          248 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM  293 (295)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             cCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence            4456677889999999999999999999999999999999886543

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.97  E-value=4.6e-31  Score=267.19  Aligned_cols=184  Identities=15%  Similarity=0.143  Sum_probs=151.3

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEE-------------------ccCCc
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL-------------------NEADR   61 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILl-------------------d~~~~   61 (503)
                      |||++|+|.+.+.......+++.+++.++.||+.||+|||++||+||||||+|||+                   +.++.
T Consensus       101 ~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~  180 (355)
T 2eu9_A          101 FELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS  180 (355)
T ss_dssp             EECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCC
T ss_pred             EeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCc
Confidence            79999999999986555689999999999999999999999999999999999999                   56789


Q ss_pred             EEEEecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 010713           62 AVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV  141 (503)
Q Consensus        62 vKL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i  141 (503)
                      +||+|||++.....      ......||+.|+|||++.+.   .++.++|||||||++|+|++|..||......+....+
T Consensus       181 ~kl~Dfg~~~~~~~------~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~  251 (355)
T 2eu9_A          181 IRVADFGSATFDHE------HHTTIVATRHYRPPEVILEL---GWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMM  251 (355)
T ss_dssp             EEECCCTTCEETTS------CCCSSCSCGGGCCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             EEEeecCccccccc------cccCCcCCCcccCCeeeecC---CCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            99999999976432      23456799999999999754   6889999999999999999999999988776655444


Q ss_pred             HhccCCCC------------------------------------------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHH
Q 010713          142 VRRQEIPP------------------------------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDI  179 (503)
Q Consensus       142 ~~~~~~~~------------------------------------------~~~~~s~~l~~LI~~cL~~DP~~RPS~~el  179 (503)
                      .......+                                          .....+..+.+||.+||+.||++|||+.++
T Consensus       252 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~  331 (355)
T 2eu9_A          252 EKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEA  331 (355)
T ss_dssp             HHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             HHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHH
Confidence            33211110                                          011224689999999999999999999999


Q ss_pred             HHHHHhhccCcCCCCCCCCC
Q 010713          180 LRVFKSSQNSVHSDGGWTGH  199 (503)
Q Consensus       180 L~~L~~i~~~~~~~~~w~~~  199 (503)
                      ++      ++|+...++...
T Consensus       332 l~------hp~f~~~~~~~~  345 (355)
T 2eu9_A          332 LL------HPFFAGLTPEER  345 (355)
T ss_dssp             TT------SGGGGGCCHHHH
T ss_pred             hc------ChhhcCCChhhc
Confidence            88      899887666443

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.97  E-value=7.6e-31  Score=268.16  Aligned_cols=176  Identities=18%  Similarity=0.224  Sum_probs=146.9

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEcc----------------------
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE----------------------   58 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~----------------------   58 (503)
                      |||++|+|.+++.......+++.+++.++.||+.||+|||++||+||||||+|||++.                      
T Consensus       115 ~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~  194 (360)
T 3llt_A          115 FEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIY  194 (360)
T ss_dssp             ECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEE
T ss_pred             EcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhccccccccccc
Confidence            7999889999998766667999999999999999999999999999999999999975                      


Q ss_pred             ---CCcEEEEecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChH
Q 010713           59 ---ADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD  135 (503)
Q Consensus        59 ---~~~vKL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~  135 (503)
                         ++.+||+|||++.....      ......||+.|+|||++.+.   .++.++|||||||++|+|++|+.||...+..
T Consensus       195 ~~~~~~~kl~DFG~a~~~~~------~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~pf~~~~~~  265 (360)
T 3llt_A          195 RTKSTGIKLIDFGCATFKSD------YHGSIINTRQYRAPEVILNL---GWDVSSDMWSFGCVLAELYTGSLLFRTHEHM  265 (360)
T ss_dssp             EESCCCEEECCCTTCEETTS------CCCSCCSCGGGCCHHHHTTC---CCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             ccCCCCEEEEeccCceecCC------CCcCccCcccccCcHHHcCC---CCCCccchHHHHHHHHHHHHCCCCCCCCcHH
Confidence               78999999999976432      23456789999999999854   6899999999999999999999999988877


Q ss_pred             HHHHHHHhccCCCC------------------------CC--------------------CCCcHHHHHHHHHhhhcCCC
Q 010713          136 EIYDAVVRRQEIPP------------------------IP--------------------SGLPPAVENVLLGCFEYDLR  171 (503)
Q Consensus       136 e~~~~i~~~~~~~~------------------------~~--------------------~~~s~~l~~LI~~cL~~DP~  171 (503)
                      +....+.......+                        .+                    ...++.+.+||.+||+.||.
T Consensus       266 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~  345 (360)
T 3llt_A          266 EHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPT  345 (360)
T ss_dssp             HHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGG
T ss_pred             HHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChh
Confidence            76665544222111                        00                    11247788999999999999


Q ss_pred             CCCCHHHHHHHHHhhccCcC
Q 010713          172 SRPLMTDILRVFKSSQNSVH  191 (503)
Q Consensus       172 ~RPS~~elL~~L~~i~~~~~  191 (503)
                      +|||+.|+++      ++|+
T Consensus       346 ~Rpta~elL~------hp~f  359 (360)
T 3llt_A          346 LRPSPAELLK------HKFL  359 (360)
T ss_dssp             GSCCHHHHTT------SGGG
T ss_pred             hCCCHHHHhc------Cccc
Confidence            9999999987      6665

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.97  E-value=8.1e-31  Score=265.30  Aligned_cols=183  Identities=22%  Similarity=0.348  Sum_probs=148.6

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++|+|.+++.. ....+++.++..++.||+.||+|||++||+||||||+||+++.++.+||+|||++.....   ..
T Consensus        79 ~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~---~~  154 (324)
T 3mtl_A           79 FEYLDKDLKQYLDD-CGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSI---PT  154 (324)
T ss_dssp             EECCSEEHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred             ecccccCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccC---Cc
Confidence            79999999999975 456799999999999999999999999999999999999999999999999999875432   12


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC-----------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-----------  149 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~-----------  149 (503)
                      .......+|+.|+|||++.+.  ..++.++|||||||++|+|++|..||.+.+..+....+......+.           
T Consensus       155 ~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  232 (324)
T 3mtl_A          155 KTYDNEVVTLWYRPPDILLGS--TDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNE  232 (324)
T ss_dssp             --------CGGGCCHHHHTTC--CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCH
T ss_pred             cccccccCcccccChhhhcCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcch
Confidence            233455789999999998753  2578999999999999999999999999888877776655322211           


Q ss_pred             -----------------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCC
Q 010713          150 -----------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGG  195 (503)
Q Consensus       150 -----------------~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~  195 (503)
                                       ....+++++.+||.+||+.||.+|||+.|+++      ++|+....
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~------hp~f~~~~  289 (324)
T 3mtl_A          233 EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK------HPFFLSLG  289 (324)
T ss_dssp             HHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT------SGGGGGGC
T ss_pred             hhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc------Chhhhhcc
Confidence                             11357889999999999999999999999998      88887544

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.97  E-value=5.2e-31  Score=260.27  Aligned_cols=181  Identities=22%  Similarity=0.385  Sum_probs=144.9

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.. ....+++.+++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++.......  
T Consensus        94 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--  170 (281)
T 1mp8_A           94 MELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST--  170 (281)
T ss_dssp             EECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-------------
T ss_pred             EecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccCccc--
Confidence            789986 99999975 45579999999999999999999999999999999999999999999999999997654321  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........+++.|+|||++.+.   .++.++||||||+++|+|++ |..||.+....+....+... ...+.+..+++.+
T Consensus       171 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~l  246 (281)
T 1mp8_A          171 YYKASKGKLPIKWMAPESINFR---RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG-ERLPMPPNCPPTL  246 (281)
T ss_dssp             --------CCGGGCCHHHHHHC---CCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT-CCCCCCTTCCHHH
T ss_pred             ccccccCCCcccccChhhcccC---CCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcC-CCCCCCCCCCHHH
Confidence            1112334567889999998743   68899999999999999997 99999988887777666543 3456778899999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      .++|.+||+.||++|||+.++++.|+.+..
T Consensus       247 ~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  276 (281)
T 1mp8_A          247 YSLMTKCWAYDPSRRPRFTELKAQLSTILE  276 (281)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            999999999999999999999999998754

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.97  E-value=2.2e-30  Score=275.23  Aligned_cols=178  Identities=19%  Similarity=0.300  Sum_probs=153.6

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEc---cCCcEEEEecCCcccccCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN---EADRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld---~~~~vKL~DFGla~~~~~~   76 (503)
                      ||||+| +|.+.+.  ..+.+++.++..++.||+.||+|||++||+||||||+|||++   .++.+||+|||++......
T Consensus        89 ~E~~~gg~L~~~i~--~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~  166 (444)
T 3soa_A           89 FDLVTGGELFEDIV--AREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE  166 (444)
T ss_dssp             ECCCBCCBHHHHHH--HCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTT
T ss_pred             EEeCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCC
Confidence            799985 9999997  456799999999999999999999999999999999999998   4578999999999765432


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCC--CCCC
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPI--PSGL  154 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~--~~~~  154 (503)
                         ........||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.+..+.+..+.......+.  ...+
T Consensus       167 ---~~~~~~~~gt~~Y~APE~l~~~---~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  240 (444)
T 3soa_A          167 ---QQAWFGFAGTPGYLSPEVLRKD---PYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTV  240 (444)
T ss_dssp             ---CCBCCCSCSCGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTS
T ss_pred             ---CceeecccCCcccCCHHHhcCC---CCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccC
Confidence               2223456899999999999754   6889999999999999999999999999988888888775543332  2578


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      ++++.+||.+||+.||.+|||+.|+++      ++|+.
T Consensus       241 s~~~~~li~~~L~~dP~~Rpta~e~L~------hp~~~  272 (444)
T 3soa_A          241 TPEAKDLINKMLTINPSKRITAAEALK------HPWIS  272 (444)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHH------SCTTH
T ss_pred             CHHHHHHHHHHcCCChhHCCCHHHHhc------Ccccc
Confidence            999999999999999999999999999      77764

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.97  E-value=2.4e-30  Score=269.85  Aligned_cols=187  Identities=18%  Similarity=0.245  Sum_probs=155.1

Q ss_pred             CcCCCCCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEc-cCCcEEEEecCCcccccCCC
Q 010713            1 MKFYEGSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN-EADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~GSL~d~L~~~--~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld-~~~~vKL~DFGla~~~~~~~   77 (503)
                      |||+++++.+.+...  ....+++..+..++.||+.||+|||++||+||||||+|||++ .++.+||+|||+++....  
T Consensus       117 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~--  194 (394)
T 4e7w_A          117 LEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA--  194 (394)
T ss_dssp             EECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCT--
T ss_pred             eeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccC--
Confidence            799999877766532  367899999999999999999999999999999999999999 789999999999987643  


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC---------
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP---------  148 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~---------  148 (503)
                        ........+|+.|+|||++.+.  ..++.++|||||||++|+|++|+.||.+.+..+....+......+         
T Consensus       195 --~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~  270 (394)
T 4e7w_A          195 --GEPNVSYICSRYYRAPELIFGA--TNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMN  270 (394)
T ss_dssp             --TCCCCSSCSCGGGCCHHHHTTC--SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHC
T ss_pred             --CCCCcccccCcCccCHHHHcCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhC
Confidence              2233456789999999998653  258899999999999999999999999988777666655421111         


Q ss_pred             ------------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCCC
Q 010713          149 ------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGH  199 (503)
Q Consensus       149 ------------------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~~  199 (503)
                                        .++..+++++.+||.+||+.||.+|||+.|+++      |+|+....+...
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~------hp~f~~~~~~~~  333 (394)
T 4e7w_A          271 PNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC------HPFFDELRTGEA  333 (394)
T ss_dssp             GGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT------SGGGSTTTSSCC
T ss_pred             hhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc------Chhhhhhccccc
Confidence                              023458899999999999999999999999998      999987766543

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.97  E-value=3.9e-31  Score=265.60  Aligned_cols=200  Identities=20%  Similarity=0.315  Sum_probs=163.5

Q ss_pred             CcCCCC-CHHHHHHhhc--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcc
Q 010713            1 MKFYEG-SVGDRMAQLK--------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH   71 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~--------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~   71 (503)
                      |||++| +|.+++....        ...+++.+++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++.
T Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~  186 (322)
T 1p4o_A          107 MELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR  186 (322)
T ss_dssp             EECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCC
T ss_pred             EEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECcCcccc
Confidence            789984 9999997542        1567999999999999999999999999999999999999999999999999987


Q ss_pred             cccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCC
Q 010713           72 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI  150 (503)
Q Consensus        72 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~  150 (503)
                      ....... ........+|+.|+|||++.+.   .++.++||||||+++|+|++ |..||.+....+....+... .....
T Consensus       187 ~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~  261 (322)
T 1p4o_A          187 DIYETDY-YRKGGKGLLPVRWMSPESLKDG---VFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG-GLLDK  261 (322)
T ss_dssp             GGGGGGC-EEGGGSSEECGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTT-CCCCC
T ss_pred             ccccccc-cccccCCCCCCCccChhhhccC---CCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcC-CcCCC
Confidence            6532111 1112234568899999998743   68899999999999999999 89999998888777766553 34556


Q ss_pred             CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCCCCCcCCC
Q 010713          151 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGHGSRILP  205 (503)
Q Consensus       151 ~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~~~~~~~~  205 (503)
                      +..++..+.++|.+||+.||.+|||+.++++.|+....+.+...+|........+
T Consensus       262 ~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~~~~~~~~~~~~~~~  316 (322)
T 1p4o_A          262 PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSEENKLP  316 (322)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHHHCSTTSTTC---
T ss_pred             CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCCcccccccccccCCC
Confidence            7889999999999999999999999999999999998887776666554444333

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=1.9e-30  Score=264.98  Aligned_cols=185  Identities=23%  Similarity=0.263  Sum_probs=154.6

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++|+|.+++.. ....+++.++..++.|++.||+|||++||+||||||+||+++.++.+||+|||++......   .
T Consensus        91 ~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~---~  166 (346)
T 1ua2_A           91 FDFMETDLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP---N  166 (346)
T ss_dssp             EECCSEEHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC---C
T ss_pred             EEcCCCCHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCC---c
Confidence            78999999998864 4457999999999999999999999999999999999999999999999999999765431   2


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC-----------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-----------  149 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~-----------  149 (503)
                      .......+|+.|+|||++.+.  ..++.++|||||||++|+|++|.+||.+.+..+.+..+......+.           
T Consensus       167 ~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  244 (346)
T 1ua2_A          167 RAYTHQVVTRWYRAPELLFGA--RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLP  244 (346)
T ss_dssp             CCCCCSCCCCTTCCHHHHTTC--SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSST
T ss_pred             ccCCcccccccccCchHhhCC--CCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCc
Confidence            233456789999999998643  2478899999999999999999999999888877777665322211           


Q ss_pred             ---------------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCC
Q 010713          150 ---------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWT  197 (503)
Q Consensus       150 ---------------~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~  197 (503)
                                     +...++.++.+||.+||+.||.+|||+.|+++      ++|+....+.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~------h~~f~~~~~~  301 (346)
T 1ua2_A          245 DYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK------MKYFSNRPGP  301 (346)
T ss_dssp             TCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT------SGGGTSSSCC
T ss_pred             ccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc------ChhhhcCCCC
Confidence                           01456789999999999999999999999999      8888765443

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.97  E-value=1.4e-30  Score=274.96  Aligned_cols=178  Identities=21%  Similarity=0.285  Sum_probs=150.8

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCc--EEEEecCCcccccCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR--AVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~--vKL~DFGla~~~~~~~~   78 (503)
                      |||++|+|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+|||++.....   
T Consensus       178 ~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~---  254 (429)
T 3kvw_A          178 FELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ---  254 (429)
T ss_dssp             ECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTC---
T ss_pred             EeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecCC---
Confidence            7999999999998766667999999999999999999999999999999999999999887  99999999976432   


Q ss_pred             CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC---------
Q 010713           79 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP---------  149 (503)
Q Consensus        79 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~---------  149 (503)
                         ......||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.+..+....+......++         
T Consensus       255 ---~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~  328 (429)
T 3kvw_A          255 ---RVYTYIQSRFYRAPEVILGA---RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKR  328 (429)
T ss_dssp             ---CCCSSCSCGGGCCHHHHHTB---CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTT
T ss_pred             ---cccccCCCCCccChHHHhCC---CCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhh
Confidence               33456899999999999754   689999999999999999999999999888777666553211110         


Q ss_pred             ------------------------------------------------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          150 ------------------------------------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       150 ------------------------------------------------~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                                                                      ++...++.+.+||.+||+.||++|||+.|+++
T Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~  408 (429)
T 3kvw_A          329 AKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALR  408 (429)
T ss_dssp             HHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhC
Confidence                                                            11234788999999999999999999999998


Q ss_pred             HHHhhccCcCCC
Q 010713          182 VFKSSQNSVHSD  193 (503)
Q Consensus       182 ~L~~i~~~~~~~  193 (503)
                            |+|+..
T Consensus       409 ------Hpw~~~  414 (429)
T 3kvw_A          409 ------HPWLRR  414 (429)
T ss_dssp             ------STTTC-
T ss_pred             ------Chhhcc
Confidence                  888764

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.97  E-value=4.1e-31  Score=260.97  Aligned_cols=184  Identities=26%  Similarity=0.405  Sum_probs=155.8

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.. ....+++.++..++.||+.||+|||++||+|+||||+||+++.++.+||+|||++.........
T Consensus        99 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~  177 (291)
T 1u46_A           99 TELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH  177 (291)
T ss_dssp             EECCTTCBHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCE
T ss_pred             EecccCCCHHHHHHh-ccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccccccccc
Confidence            68888 599999975 3466999999999999999999999999999999999999999999999999999776432211


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........+++.|+|||++.+.   .++.++||||||+++|+|++ |..||.+.+..+....+.......+.+..+++.+
T Consensus       178 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  254 (291)
T 1u46_A          178 YVMQEHRKVPFAWCAPESLKTR---TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDI  254 (291)
T ss_dssp             EEC-----CCGGGCCHHHHHHC---EEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHH
T ss_pred             hhhhccCCCCceeeCchhhcCC---CCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCcCHHH
Confidence            1222345677889999999743   57889999999999999999 9999999988888888877666667778899999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      .++|.+||+.||.+|||+.++++.|+++..
T Consensus       255 ~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  284 (291)
T 1u46_A          255 YNVMVQCWAHKPEDRPTFVALRDFLLEAQP  284 (291)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             HHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence            999999999999999999999999998754

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.97  E-value=6.4e-31  Score=257.72  Aligned_cols=181  Identities=18%  Similarity=0.307  Sum_probs=154.7

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.. ....+++.+++.++.|++.||+|||++||+||||||+||+++.++.++|+|||++.......  
T Consensus        84 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--  160 (269)
T 4hcu_A           84 FEFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ--  160 (269)
T ss_dssp             EECCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH--
T ss_pred             EEeCCCCcHHHHHHh-cCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccccc--
Confidence            799985 89999964 45679999999999999999999999999999999999999999999999999997653211  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........+++.|+|||.+.+.   .++.++|+||||+++|+|++ |..||......+....+... .....+..+++.+
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  236 (269)
T 4hcu_A          161 YTSSTGTKFPVKWASPEVFSFS---RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-FRLYKPRLASTHV  236 (269)
T ss_dssp             HHSTTSTTCCGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-CCCCCCTTSCHHH
T ss_pred             cccccCcccccccCCHHHhcCC---CCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcC-ccCCCCCcCCHHH
Confidence            1122344567889999999743   68899999999999999999 99999998888887776553 4455677889999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      .++|.+||+.||++||++.++++.|+++..
T Consensus       237 ~~li~~~l~~~p~~Rps~~~ll~~l~~l~~  266 (269)
T 4hcu_A          237 YQIMNHCWRERPEDRPAFSRLLRQLAEIAE  266 (269)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence            999999999999999999999999998764

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.97  E-value=7.2e-31  Score=269.87  Aligned_cols=183  Identities=17%  Similarity=0.217  Sum_probs=151.4

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++|+|.+++..   ..+++.++..++.||+.||+|||++||+||||||+||+++.++.+||+|||++..........
T Consensus       109 ~e~~~~~L~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~  185 (364)
T 3qyz_A          109 QDLMETDLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT  185 (364)
T ss_dssp             EECCSEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBC
T ss_pred             EcccCcCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCcc
Confidence            68999999999853   569999999999999999999999999999999999999999999999999997664322222


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC-----------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-----------  149 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~-----------  149 (503)
                      .......||+.|+|||++.+.  ..++.++|||||||++|+|++|..||.+.+..+....+......+.           
T Consensus       186 ~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  263 (364)
T 3qyz_A          186 GFLTEYVATRWYRAPEIMLNS--KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK  263 (364)
T ss_dssp             CTTCCCCSCGGGCCHHHHHTB--CSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHH
T ss_pred             ccccccccccCCCCCHHhcCC--CCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhh
Confidence            233456899999999987532  2578999999999999999999999998877766665543211111           


Q ss_pred             ------------------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCC
Q 010713          150 ------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDG  194 (503)
Q Consensus       150 ------------------~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~  194 (503)
                                        ....+++++.+||.+||+.||.+|||+.|+++      ++|+...
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~------hp~~~~~  320 (364)
T 3qyz_A          264 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA------HPYLEQY  320 (364)
T ss_dssp             HHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT------SGGGTTT
T ss_pred             HHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc------Ccchhhc
Confidence                              12467899999999999999999999999998      8888754

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.97  E-value=1.1e-30  Score=268.16  Aligned_cols=173  Identities=21%  Similarity=0.292  Sum_probs=151.0

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++|+|.+++.. ....+++.++..++.|++.||+|||++||+||||||+|||++.++.+||+|||++.....     
T Consensus       133 ~e~~~g~l~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~-----  206 (348)
T 1u5q_A          133 MEYCLGSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-----  206 (348)
T ss_dssp             EECCSEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-----
T ss_pred             EecCCCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCC-----
Confidence            79999999999865 456799999999999999999999999999999999999999999999999999876532     


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHHH
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVEN  160 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~~  160 (503)
                        .....||+.|+|||++.+...+.++.++|||||||++|+|++|..||.+.+..+....+.........+..+++.+.+
T Consensus       207 --~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  284 (348)
T 1u5q_A          207 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRN  284 (348)
T ss_dssp             --BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHH
T ss_pred             --CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHH
Confidence              234579999999999854334568899999999999999999999999888777776666655444456788999999


Q ss_pred             HHHHhhhcCCCCCCCHHHHHH
Q 010713          161 VLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       161 LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ||.+||+.||++|||+.++++
T Consensus       285 li~~~l~~dP~~Rps~~~ll~  305 (348)
T 1u5q_A          285 FVDSCLQKIPQDRPTSEVLLK  305 (348)
T ss_dssp             HHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHcccChhhCcCHHHHhh
Confidence            999999999999999999988

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=1e-30  Score=258.97  Aligned_cols=186  Identities=19%  Similarity=0.273  Sum_probs=157.8

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.. ....+++.+++.++.||+.||+|||++||+||||||+||+++.++.++|+|||++.........
T Consensus        88 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~  166 (287)
T 1u59_A           88 MEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY  166 (287)
T ss_dssp             EECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred             EEeCCCCCHHHHHHh-CCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcce
Confidence            789986 99999864 4567999999999999999999999999999999999999999999999999999876432221


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........+|+.|+|||++.+.   .++.++||||||+++|+|++ |..||......+....+.. ...+..+..+++.+
T Consensus       167 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~-~~~~~~~~~~~~~l  242 (287)
T 1u59_A          167 YTARSAGKWPLKWYAPECINFR---KFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ-GKRMECPPECPPEL  242 (287)
T ss_dssp             ECCCCSSCCCGGGCCHHHHHHC---EECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHT-TCCCCCCTTCCHHH
T ss_pred             eeccccccccccccCHHHhccC---CCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhc-CCcCCCCCCcCHHH
Confidence            2223344568899999998743   57889999999999999998 9999998887777766554 34566778899999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcC
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVH  191 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~  191 (503)
                      .++|.+||+.||.+||++.++++.|+.+.....
T Consensus       243 ~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~  275 (287)
T 1u59_A          243 YALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA  275 (287)
T ss_dssp             HHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence            999999999999999999999999998876543

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.97  E-value=2.1e-30  Score=257.95  Aligned_cols=183  Identities=20%  Similarity=0.378  Sum_probs=155.2

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++++|.+++.......+++.++..++.||+.||+|||++||+||||||+||+++.++.++|+|||++........ .
T Consensus        87 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~-~  165 (305)
T 2wtk_C           87 MEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAA-D  165 (305)
T ss_dssp             EECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCS-S
T ss_pred             ehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCcccc-c
Confidence            799998899999876678899999999999999999999999999999999999999999999999999976543211 1


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHHH
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVEN  160 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~~  160 (503)
                      .......||+.|+|||++.+. ...++.++||||||+++|+|++|..||.+.+..+....+...  ...++..+++.+.+
T Consensus       166 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~--~~~~~~~~~~~l~~  242 (305)
T 2wtk_C          166 DTCRTSQGSPAFQPPEIANGL-DTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKG--SYAIPGDCGPPLSD  242 (305)
T ss_dssp             CEECCCCSCGGGCCHHHHTCC-SCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC--CCCCCSSSCHHHHH
T ss_pred             cccccCCCCCCCcChhhccCc-ccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcC--CCCCCCccCHHHHH
Confidence            222355689999999998753 223467999999999999999999999998888877776553  34567789999999


Q ss_pred             HHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          161 VLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       161 LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      ||.+||+.||.+|||+.++++      ++|+..
T Consensus       243 li~~~l~~dp~~Rps~~~ll~------~~~~~~  269 (305)
T 2wtk_C          243 LLKGMLEYEPAKRFSIRQIRQ------HSWFRK  269 (305)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHH------SHHHHS
T ss_pred             HHHHHccCChhhCCCHHHHhc------Cccccc
Confidence            999999999999999999998      666544

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.97  E-value=9.7e-31  Score=263.13  Aligned_cols=184  Identities=19%  Similarity=0.299  Sum_probs=148.7

Q ss_pred             CcCCCC-CHHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccC
Q 010713            1 MKFYEG-SVGDRMAQLKG----GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG   75 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~----~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~   75 (503)
                      |||++| +|.+++.....    ..+++.+++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++.....
T Consensus       110 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~  189 (323)
T 3qup_A          110 LPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYS  189 (323)
T ss_dssp             EECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred             EEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEeeccccccccc
Confidence            689985 99999975432    2699999999999999999999999999999999999999999999999999976543


Q ss_pred             CCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCC
Q 010713           76 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGL  154 (503)
Q Consensus        76 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~  154 (503)
                      ... ........+++.|+|||.+.+.   .++.++|||||||++|+|++ |..||.+....+....+... .....+..+
T Consensus       190 ~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~  264 (323)
T 3qup_A          190 GDY-YRQGCASKLPVKWLALESLADN---LYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGG-NRLKQPPEC  264 (323)
T ss_dssp             ------------CCGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT-CCCCCCTTC
T ss_pred             ccc-ccccccccCcccccCchhhcCC---CCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcC-CCCCCCCcc
Confidence            221 1122234567889999999744   68899999999999999999 99999998888877776553 345567789


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      ++.+.+||.+||+.||.+|||+.++++.|+++...
T Consensus       265 ~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~  299 (323)
T 3qup_A          265 MEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH  299 (323)
T ss_dssp             CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999988653

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.97  E-value=9.8e-31  Score=260.94  Aligned_cols=185  Identities=18%  Similarity=0.296  Sum_probs=155.4

Q ss_pred             CcCCCC-CHHHHHHhhcC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEE
Q 010713            1 MKFYEG-SVGDRMAQLKG----------------GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV   63 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~----------------~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vK   63 (503)
                      |||++| +|.+++.....                ..+++.+++.++.||+.||+|||++||+||||||+||+++.++.+|
T Consensus       106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~k  185 (313)
T 1t46_A          106 TEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITK  185 (313)
T ss_dssp             EECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEE
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEE
Confidence            789985 99999976432                2599999999999999999999999999999999999999999999


Q ss_pred             EEecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 010713           64 LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVV  142 (503)
Q Consensus        64 L~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~  142 (503)
                      |+|||++........ ........+++.|+|||++.+.   .++.++||||||+++|+|++ |..||.+...........
T Consensus       186 l~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~  261 (313)
T 1t46_A          186 ICDFGLARDIKNDSN-YVVKGNARLPVKWMAPESIFNC---VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI  261 (313)
T ss_dssp             ECCCGGGSCTTSCTT-SEECSSSEECGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHH
T ss_pred             Ecccccccccccccc-ceeccCCCCcceeeChHHhcCC---CCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHh
Confidence            999999876543211 1112344577889999998743   68899999999999999999 999998877666665665


Q ss_pred             hccCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          143 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       143 ~~~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      ........+..+++.+.++|.+||+.||.+|||+.++++.|+++...
T Consensus       262 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  308 (313)
T 1t46_A          262 KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (313)
T ss_dssp             HHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence            55556666788999999999999999999999999999999987653

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.97  E-value=2.1e-31  Score=272.93  Aligned_cols=177  Identities=20%  Similarity=0.322  Sum_probs=148.6

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++|+|.+++..  .+.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....    .
T Consensus        88 ~E~~~g~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~----~  161 (336)
T 3h4j_B           88 IEYAGGELFDYIVE--KKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD----G  161 (336)
T ss_dssp             ECCCCEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT----S
T ss_pred             EECCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccC----C
Confidence            79999999999974  46799999999999999999999999999999999999999999999999999976543    2


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHHH
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVEN  160 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~~  160 (503)
                      ......+||+.|+|||++.+..  ..+.++|||||||++|+|++|..||.+....+....+.  .....++..+++.+.+
T Consensus       162 ~~~~~~~gt~~y~aPE~~~~~~--~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~--~~~~~~p~~~s~~~~~  237 (336)
T 3h4j_B          162 NFLKTSCGSPNYAAPEVINGKL--YAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVN--SCVYVMPDFLSPGAQS  237 (336)
T ss_dssp             BTTCCCTTSTTTSCGGGSCCSG--GGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCC--SSCCCCCTTSCHHHHH
T ss_pred             cccccccCCcCcCCHHHHcCCC--CCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHH--cCCCCCcccCCHHHHH
Confidence            2334568999999999997542  23689999999999999999999998765544333221  1234567789999999


Q ss_pred             HHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          161 VLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       161 LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      ||.+||+.||.+|||+.|+++      ++|+..
T Consensus       238 li~~~L~~dP~~Rpt~~eil~------hp~~~~  264 (336)
T 3h4j_B          238 LIRRMIVADPMQRITIQEIRR------DPWFNV  264 (336)
T ss_dssp             HHHTTSCSSGGGSCCHHHHTT------CHHHHT
T ss_pred             HHHHHcCCChhHCcCHHHHHh------Chhhcc
Confidence            999999999999999999988      776653

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.97  E-value=9.4e-31  Score=263.35  Aligned_cols=174  Identities=25%  Similarity=0.360  Sum_probs=143.4

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++|+|.+++.. ....+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++.....    .
T Consensus       136 ~e~~~~~L~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~----~  210 (311)
T 3p1a_A          136 TELCGPSLQQHCEA-WGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT----A  210 (311)
T ss_dssp             EECCCCBHHHHHHH-HCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC------
T ss_pred             EeccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeeccc----C
Confidence            79999999999976 456799999999999999999999999999999999999999999999999999876543    2


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHHH
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVEN  160 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~~  160 (503)
                      .......||+.|+|||++.+    .++.++|||||||++|+|++|..|+...   .....+......+.++..+++++.+
T Consensus       211 ~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~el~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~  283 (311)
T 3p1a_A          211 GAGEVQEGDPRYMAPELLQG----SYGTAADVFSLGLTILEVACNMELPHGG---EGWQQLRQGYLPPEFTAGLSSELRS  283 (311)
T ss_dssp             ----CCCCCGGGCCGGGGGT----CCSTHHHHHHHHHHHHHHHHTCCCCSSH---HHHHHHTTTCCCHHHHTTSCHHHHH
T ss_pred             CCCcccCCCccccCHhHhcC----CCCchhhHHHHHHHHHHHHhCCCCCCCc---cHHHHHhccCCCcccccCCCHHHHH
Confidence            22334569999999999864    5889999999999999999997766543   2233333333333445778999999


Q ss_pred             HHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          161 VLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       161 LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      ||.+||+.||++|||+.++++      ++|+.
T Consensus       284 li~~~L~~dP~~Rpt~~ell~------hp~~~  309 (311)
T 3p1a_A          284 VLVMMLEPDPKLRATAEALLA------LPVLR  309 (311)
T ss_dssp             HHHHHSCSSTTTSCCHHHHHT------SGGGS
T ss_pred             HHHHHcCCChhhCcCHHHHHh------Ccccc
Confidence            999999999999999999998      77764

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.97  E-value=1.5e-30  Score=266.12  Aligned_cols=187  Identities=12%  Similarity=0.119  Sum_probs=150.4

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC--cEEEEecCCcccccCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD--RAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~--~vKL~DFGla~~~~~~~~   78 (503)
                      |||++|+|.+++.......+++.+++.++.||+.||+|||++||+||||||+||+++.++  .+||+|||++........
T Consensus       137 ~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~  216 (352)
T 2jii_A          137 LPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGK  216 (352)
T ss_dssp             EECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGC
T ss_pred             ecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCc
Confidence            799977999999865457899999999999999999999999999999999999999988  899999999976543211


Q ss_pred             ----CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHh-ccCCCCCC
Q 010713           79 ----PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS--VDEIYDAVVR-RQEIPPIP  151 (503)
Q Consensus        79 ----~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~--~~e~~~~i~~-~~~~~~~~  151 (503)
                          .........||+.|+|||++.+.   .++.++|||||||++|+|++|..||....  .......... ......+.
T Consensus       217 ~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  293 (352)
T 2jii_A          217 HVAYVEGSRSPHEGDLEFISMDLHKGC---GPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFV  293 (352)
T ss_dssp             CCCCCTTSSCTTCSCTTTCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEE
T ss_pred             cccccccccccccCCccccCHHHHccC---CCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhh
Confidence                11122345799999999999854   68899999999999999999999998753  3333222221 11112221


Q ss_pred             ------CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCc
Q 010713          152 ------SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSV  190 (503)
Q Consensus       152 ------~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~  190 (503)
                            ..+++.+.+||.+||+.||.+||++.++++.|+.+....
T Consensus       294 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~  338 (352)
T 2jii_A          294 GPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDL  338 (352)
T ss_dssp             CTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             hhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhc
Confidence                  257899999999999999999999999999999886544

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.97  E-value=4e-31  Score=269.88  Aligned_cols=181  Identities=13%  Similarity=0.151  Sum_probs=144.4

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC--cEEEEecCCcccccCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD--RAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~--~vKL~DFGla~~~~~~~~   78 (503)
                      |||++|+|.+++..  .+.+++.+++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+++.......
T Consensus       131 ~e~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~  208 (345)
T 2v62_A          131 MERLGIDLQKISGQ--NGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGN  208 (345)
T ss_dssp             EECEEEEHHHHCBG--GGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGC
T ss_pred             EeccCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceecccccc
Confidence            78997799999964  34899999999999999999999999999999999999999887  999999999976533211


Q ss_pred             C----CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCC--ChHHHHHHHHhccCCCCCC-
Q 010713           79 P----SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR--SVDEIYDAVVRRQEIPPIP-  151 (503)
Q Consensus        79 ~----~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~--~~~e~~~~i~~~~~~~~~~-  151 (503)
                      .    ........||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.  ...........  ....++ 
T Consensus       209 ~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~  283 (345)
T 2v62_A          209 HKQYQENPRKGHNGTIEFTSLDAHKGV---ALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTN--LLDELPQ  283 (345)
T ss_dssp             CCCCCCCGGGCSCSCTTTCCHHHHHTC---CCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHH--HHHTTTH
T ss_pred             cccchhccccccCCCccccCHHHhcCC---CCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHh--hcccccH
Confidence            1    1112345799999999999854   6899999999999999999999999652  22222111111  111111 


Q ss_pred             --------CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          152 --------SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       152 --------~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                              ..+++++.++|.+||+.||++||++.++++.|+.+.-
T Consensus       284 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~  328 (345)
T 2v62_A          284 SVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI  328 (345)
T ss_dssp             HHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred             HHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence                    2789999999999999999999999999999987643

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.97  E-value=1.1e-30  Score=255.44  Aligned_cols=181  Identities=17%  Similarity=0.245  Sum_probs=153.5

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.. ....+++.+++.++.|++.||+|||++||+||||||+||+++.++.++|+|||++.......  
T Consensus        82 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~--  158 (268)
T 3sxs_A           82 TEYISNGCLLNYLRS-HGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ--  158 (268)
T ss_dssp             EECCTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC--
T ss_pred             EEccCCCcHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhh--
Confidence            78997 589999975 34569999999999999999999999999999999999999999999999999997654321  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........+++.|+|||.+.+.   .++.++||||||+++|+|++ |..||......+....+... .....+..+++.+
T Consensus       159 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l  234 (268)
T 3sxs_A          159 YVSSVGTKFPVKWSAPEVFHYF---KYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQG-HRLYRPHLASDTI  234 (268)
T ss_dssp             EEECCSCCCCGGGCCHHHHHHS---EEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT-CCCCCCTTSCHHH
T ss_pred             hhcccCCCcCcccCCHHHHhcc---CCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcC-CCCCCCCcChHHH
Confidence            1112334567789999999743   57889999999999999999 99999988888777666543 3445567789999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      .++|.+||+.||.+|||+.++++.|+.+..
T Consensus       235 ~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (268)
T 3sxs_A          235 YQIMYSCWHELPEKRPTFQQLLSSIEPLRE  264 (268)
T ss_dssp             HHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence            999999999999999999999999998864

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.97  E-value=1.3e-30  Score=263.79  Aligned_cols=185  Identities=18%  Similarity=0.278  Sum_probs=154.9

Q ss_pred             CcCCCC-CHHHHHHhhc----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEc
Q 010713            1 MKFYEG-SVGDRMAQLK----------------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN   57 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~----------------------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld   57 (503)
                      |||++| +|.+++....                      ...+++.+++.++.||+.||+|||++||+||||||+||+++
T Consensus       129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~  208 (343)
T 1luf_A          129 FEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVG  208 (343)
T ss_dssp             EECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred             EecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEC
Confidence            789985 9999997642                      26799999999999999999999999999999999999999


Q ss_pred             cCCcEEEEecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHH
Q 010713           58 EADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDE  136 (503)
Q Consensus        58 ~~~~vKL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e  136 (503)
                      .++.+||+|||++........ ........+|+.|+|||++.+.   .++.++|||||||++|+|++ |..||.+....+
T Consensus       209 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~---~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~  284 (343)
T 1luf_A          209 ENMVVKIADFGLSRNIYSADY-YKADGNDAIPIRWMPPESIFYN---RYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE  284 (343)
T ss_dssp             GGGCEEECCCSCHHHHTGGGC-BC----CCBCGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH
T ss_pred             CCCeEEEeecCCCcccccCcc-ccccCCCcccceecChhhhccC---CcCcccccHHHHHHHHHHHhcCCCcCCCCChHH
Confidence            999999999999976532111 1122345678899999998743   68899999999999999999 999999988888


Q ss_pred             HHHHHHhccCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCc
Q 010713          137 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSV  190 (503)
Q Consensus       137 ~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~  190 (503)
                      ....+... ..+..+..+++.+.++|.+||+.||++||++.++++.|+++....
T Consensus       285 ~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~  337 (343)
T 1luf_A          285 VIYYVRDG-NILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA  337 (343)
T ss_dssp             HHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred             HHHHHhCC-CcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence            77766543 445567889999999999999999999999999999999987654

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=4.7e-31  Score=267.68  Aligned_cols=178  Identities=17%  Similarity=0.298  Sum_probs=152.0

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEcc--CCcEEEEecCCcccccCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE--ADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~--~~~vKL~DFGla~~~~~~~   77 (503)
                      ||||+| +|.+++.. ....+++.+++.++.||+.||+|||++||+||||||+|||++.  ++.+||+|||++.....  
T Consensus        80 ~e~~~g~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~--  156 (321)
T 1tki_A           80 FEFISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP--  156 (321)
T ss_dssp             ECCCCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT--
T ss_pred             EEeCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC--
Confidence            799985 99999963 3457999999999999999999999999999999999999987  78999999999977643  


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC--CCCCCc
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--IPSGLP  155 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~--~~~~~s  155 (503)
                        ........||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.+..+....+.......+  ....++
T Consensus       157 --~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s  231 (321)
T 1tki_A          157 --GDNFRLLFTAPEYYAPEVHQHD---VVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEIS  231 (321)
T ss_dssp             --TCEEEEEESCGGGSCHHHHTTC---EECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSC
T ss_pred             --CCccccccCChhhcCcHHhcCC---CCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCC
Confidence              2223356789999999999754   578999999999999999999999999998888888776543322  125789


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          156 PAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      +++.+||.+||..||.+|||+.|+++      ++|+.
T Consensus       232 ~~~~~li~~~L~~dp~~Rpt~~e~l~------hp~~~  262 (321)
T 1tki_A          232 IEAMDFVDRLLVKERKSRMTASEALQ------HPWLK  262 (321)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHH------SHHHH
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHhc------Chhhc
Confidence            99999999999999999999999998      66654

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.97  E-value=2e-30  Score=267.73  Aligned_cols=172  Identities=21%  Similarity=0.329  Sum_probs=148.3

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC---cEEEEecCCcccccCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD---RAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~---~vKL~DFGla~~~~~~   76 (503)
                      ||||+| +|.+.+.  ....+++.++..++.||+.||+|||++||+||||||+|||++.++   .+||+|||++..... 
T Consensus       107 ~e~~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~-  183 (362)
T 2bdw_A          107 FDLVTGGELFEDIV--AREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND-  183 (362)
T ss_dssp             ECCCCSCBHHHHHT--TCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT-
T ss_pred             EecCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecC-
Confidence            799985 9999986  456799999999999999999999999999999999999998654   599999999976643 


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCC--CCC
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGL  154 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~--~~~  154 (503)
                         ........||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.+..+.+..+.......+.+  ..+
T Consensus       184 ---~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  257 (362)
T 2bdw_A          184 ---SEAWHGFAGTPGYLSPEVLKKD---PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTV  257 (362)
T ss_dssp             ---CCSCCCSCSCTTTCCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGS
T ss_pred             ---CcccccCCCCccccCHHHHccC---CCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCC
Confidence               2233456899999999999754   68899999999999999999999999988888888777654433322  468


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ++++.+||.+||+.||.+||++.++++
T Consensus       258 ~~~~~~li~~~L~~dP~~R~t~~e~l~  284 (362)
T 2bdw_A          258 TPEAKSLIDSMLTVNPKKRITADQALK  284 (362)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            999999999999999999999999987

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.97  E-value=2.1e-30  Score=264.32  Aligned_cols=189  Identities=19%  Similarity=0.191  Sum_probs=154.2

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCC-C
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL-P   79 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~-~   79 (503)
                      ||||+|+|.+.+.. ....+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++........ .
T Consensus       103 ~e~~~~~l~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~  181 (351)
T 3mi9_A          103 FDFCEHDLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ  181 (351)
T ss_dssp             EECCSEEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSS
T ss_pred             EeccCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhccccccccccc
Confidence            79999999998864 346799999999999999999999999999999999999999999999999999976543211 1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC--CCCC----
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--IPSG----  153 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~--~~~~----  153 (503)
                      ........||+.|+|||++.+.  ..++.++|||||||++|+|++|..||.+....+....+.......+  ....    
T Consensus       182 ~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  259 (351)
T 3mi9_A          182 PNRYTNRVVTLWYRPPELLLGE--RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNY  259 (351)
T ss_dssp             CCCCCSSCSCGGGCCHHHHTTC--CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGC
T ss_pred             ccccCCcccccCccCchhhcCC--CCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccc
Confidence            2233456789999999998753  2578999999999999999999999999888777766654322211  1111    


Q ss_pred             ------------------------CcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCC
Q 010713          154 ------------------------LPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTG  198 (503)
Q Consensus       154 ------------------------~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~  198 (503)
                                              .++.+.+||.+||+.||.+|||+.|+++      ++|+....+..
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~------hp~f~~~~~~~  322 (351)
T 3mi9_A          260 ELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN------HDFFWSDPMPS  322 (351)
T ss_dssp             GGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT------SGGGGSSSCCC
T ss_pred             hhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC------CCCcCCCCCcc
Confidence                                    2678999999999999999999999999      89887654433

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=8.1e-31  Score=265.98  Aligned_cols=186  Identities=16%  Similarity=0.272  Sum_probs=154.5

Q ss_pred             CcCCCC-CHHHHHHhhcC---------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEcc
Q 010713            1 MKFYEG-SVGDRMAQLKG---------------------GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE   58 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~---------------------~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~   58 (503)
                      |||++| +|.+++.....                     ..+++.+++.++.||+.||+|||++||+||||||+||+++.
T Consensus       128 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~  207 (344)
T 1rjb_A          128 FEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTH  207 (344)
T ss_dssp             EECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEET
T ss_pred             EecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcC
Confidence            799974 99999975322                     24899999999999999999999999999999999999999


Q ss_pred             CCcEEEEecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHH
Q 010713           59 ADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEI  137 (503)
Q Consensus        59 ~~~vKL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~  137 (503)
                      ++.+||+|||++....... .........+|+.|+|||++.+.   .++.++|||||||++|+|++ |..||.+......
T Consensus       208 ~~~~kL~Dfg~~~~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~  283 (344)
T 1rjb_A          208 GKVVKICDFGLARDIMSDS-NYVVRGNARLPVKWMAPESLFEG---IYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN  283 (344)
T ss_dssp             TTEEEECCCGGGSCGGGCT-TSEEETTEEECGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred             CCcEEeCCCccCcccccCc-cceeccCccCccCccCHHHhccC---CCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHH
Confidence            9999999999997654321 11112345578899999998743   68899999999999999998 9999998776666


Q ss_pred             HHHHHhccCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCc
Q 010713          138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSV  190 (503)
Q Consensus       138 ~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~  190 (503)
                      ..........+..+..+++.+.+||.+||+.||.+|||+.++++.|+.+....
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~  336 (344)
T 1rjb_A          284 FYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA  336 (344)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred             HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence            66666666666778889999999999999999999999999999999876543

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.97  E-value=1.2e-30  Score=258.96  Aligned_cols=183  Identities=19%  Similarity=0.289  Sum_probs=153.6

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++..  ...+++.+++.++.||+.||+|||++||+||||||+||+++.++.++|+|||++.........
T Consensus        96 ~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  173 (291)
T 1xbb_A           96 MEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY  173 (291)
T ss_dssp             EECCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE
T ss_pred             EEeCCCCCHHHHHHh--CcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCc
Confidence            68998 499999974  567999999999999999999999999999999999999999999999999999776432211


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........+++.|+|||++.+.   .++.++||||||+++|+|++ |..||.+....+....+.. ...+..+..+++.+
T Consensus       174 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l  249 (291)
T 1xbb_A          174 YKAQTHGKWPVKWYAPECINYY---KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK-GERMGCPAGCPREM  249 (291)
T ss_dssp             EEC----CCCGGGCCHHHHHHC---EEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-TCCCCCCTTCCHHH
T ss_pred             ccccccCCCCceeeChHHhccC---CCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-CCCCCCCCCCCHHH
Confidence            1122234567889999999743   57889999999999999999 9999999888777666554 34566778899999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      .++|.+||+.||.+||++.++++.|+.+...
T Consensus       250 ~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~  280 (291)
T 1xbb_A          250 YDLMNLCWTYDVENRPGFAAVELRLRNYYYD  280 (291)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            9999999999999999999999999987553

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.97  E-value=9.3e-31  Score=258.30  Aligned_cols=177  Identities=21%  Similarity=0.349  Sum_probs=137.7

Q ss_pred             CcCCCCCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecccCCCcEEEccCCcEEEEecCCcccccCCC
Q 010713            1 MKFYEGSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~GSL~d~L~~~--~~~~Ls~~~vl~i~~QIl~aL~yLHs~-gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~   77 (503)
                      |||++|+|.+++...  ....+++.+++.++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++.....  
T Consensus        85 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~--  162 (290)
T 3fme_A           85 MELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD--  162 (290)
T ss_dssp             EECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC----------
T ss_pred             EehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCcccccc--
Confidence            799999998888653  457899999999999999999999998 999999999999999999999999999876543  


Q ss_pred             CCCCCCCCccCCCCCCCccccCCC-CCCCCCCccchHHHHHHHHHHHhCCCCCCC-CChHHHHHHHHhccCCCCCCCCCc
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPE-VRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVRRQEIPPIPSGLP  155 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~-~~~~~s~ksDIwSLGviLyeLltG~~Pf~~-~~~~e~~~~i~~~~~~~~~~~~~s  155 (503)
                        ........||+.|+|||++... ....++.++|||||||++|+|++|..||.. ...................+..++
T Consensus       163 --~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (290)
T 3fme_A          163 --DVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFS  240 (290)
T ss_dssp             ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSC
T ss_pred             --cccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCC
Confidence              1222345789999999997422 133678999999999999999999999986 344444444444444444446789


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          156 PAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +++.++|.+||+.||++|||+.++++
T Consensus       241 ~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          241 AEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHHhhcChhhCcCHHHHHh
Confidence            99999999999999999999999988

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.97  E-value=1.2e-30  Score=273.13  Aligned_cols=179  Identities=19%  Similarity=0.226  Sum_probs=139.9

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEcc---CCcEEEEecCCcccccCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE---ADRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~---~~~vKL~DFGla~~~~~~   76 (503)
                      ||||+| +|.+++.......+++.++..++.||+.||+|||++||+||||||+|||++.   ++.+||+|||+++.... 
T Consensus       138 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~-  216 (400)
T 1nxk_A          138 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS-  216 (400)
T ss_dssp             EECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC--
T ss_pred             EEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCC-
Confidence            799985 9999997544457999999999999999999999999999999999999987   78899999999986543 


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHhccCCCC--C
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE----IYDAVVRRQEIPP--I  150 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e----~~~~i~~~~~~~~--~  150 (503)
                         .......+||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.....    ....+.......+  .
T Consensus       217 ---~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~  290 (400)
T 1nxk_A          217 ---HNSLTTPCYTPYYVAPEVLGPE---KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE  290 (400)
T ss_dssp             -------------CTTCCGGGSCCC---CSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTT
T ss_pred             ---CCccccCCCCCCccCHhhcCCC---CCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcc
Confidence               2233466889999999999743   68899999999999999999999998654322    3333433332222  2


Q ss_pred             CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          151 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       151 ~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      ...+++++.+||.+||+.||.+|||+.++++      |+|+.
T Consensus       291 ~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~------hp~~~  326 (400)
T 1nxk_A          291 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMN------HPWIM  326 (400)
T ss_dssp             TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH------SHHHH
T ss_pred             cccCCHHHHHHHHHHCCCChhHCcCHHHHhc------Ccccc
Confidence            2578999999999999999999999999998      66654

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.97  E-value=9.2e-31  Score=268.36  Aligned_cols=193  Identities=18%  Similarity=0.254  Sum_probs=154.6

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC----CcEEEEecCCcccccC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA----DRAVLGDVGIPHLLLG   75 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~----~~vKL~DFGla~~~~~   75 (503)
                      ||||+| +|.+++.  ..+.+++.++..++.||+.||+|||++||+||||||+|||+..+    +.+||+|||++.....
T Consensus        95 ~E~~~gg~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~  172 (342)
T 2qr7_A           95 TELMKGGELLDKIL--RQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA  172 (342)
T ss_dssp             ECCCCSCBHHHHHH--TCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBC
T ss_pred             EeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcC
Confidence            799985 9999996  45679999999999999999999999999999999999998543    2599999999987543


Q ss_pred             CCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCC---CChHHHHHHHHhccCCCC--C
Q 010713           76 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG---RSVDEIYDAVVRRQEIPP--I  150 (503)
Q Consensus        76 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~---~~~~e~~~~i~~~~~~~~--~  150 (503)
                      .   .......+||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+   ....++...+........  .
T Consensus       173 ~---~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~  246 (342)
T 2qr7_A          173 E---NGLLMTPCYTANFVAPEVLERQ---GYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGY  246 (342)
T ss_dssp             T---TCCBCCSSCCSSCCCHHHHHHH---HHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTT
T ss_pred             C---CCceeccCCCccccCHHHhcCC---CCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccc
Confidence            2   2233456889999999998743   478899999999999999999999986   455666666665443222  3


Q ss_pred             CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCC
Q 010713          151 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSS  209 (503)
Q Consensus       151 ~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~  209 (503)
                      +..+++++.+||.+||..||++||++.++++      |+|+.  +|..+....+.++..
T Consensus       247 ~~~~s~~~~~li~~~L~~dP~~R~t~~~il~------hp~~~--~~~~~~~~~~~~~~~  297 (342)
T 2qr7_A          247 WNSVSDTAKDLVSKMLHVDPHQRLTAALVLR------HPWIV--HWDQLPQYQLNRQDA  297 (342)
T ss_dssp             TTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT------SHHHH--TGGGSCCSCCCCCCC
T ss_pred             cccCCHHHHHHHHHHCCCChhHCcCHHHHhc------CCeec--CccccccccCCCccc
Confidence            3678999999999999999999999999988      77763  355554444444433

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.97  E-value=3.4e-30  Score=260.89  Aligned_cols=178  Identities=20%  Similarity=0.299  Sum_probs=150.7

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.   ...+++.++..++.||+.||+|||++||+||||||+||+++.++.+||+|||++......   
T Consensus       121 ~e~~~~~~L~~~l~---~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~---  194 (321)
T 2c30_A          121 MEFLQGGALTDIVS---QVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD---  194 (321)
T ss_dssp             ECCCCSCBHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSS---
T ss_pred             EecCCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccC---
Confidence            799985 8999884   467999999999999999999999999999999999999999999999999998765431   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC-CCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-PPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~-~~~~~~~s~~l  158 (503)
                      ........||+.|+|||++.+.   .++.++||||||+++|+|++|..||......+....+...... ...+..+++.+
T Consensus       195 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  271 (321)
T 2c30_A          195 VPKRKSLVGTPYWMAPEVISRS---LYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVL  271 (321)
T ss_dssp             SCCBCCCCSCGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHH
T ss_pred             ccccccccCCccccCHhhhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHH
Confidence            1223456799999999999743   6889999999999999999999999988887777666553321 12334688999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      .++|.+||+.||++|||+.++++      ++|+..
T Consensus       272 ~~li~~~l~~dp~~Rps~~ell~------hp~~~~  300 (321)
T 2c30_A          272 RDFLERMLVRDPQERATAQELLD------HPFLLQ  300 (321)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHHT------SGGGGG
T ss_pred             HHHHHHHccCChhhCcCHHHHhc------Chhhcc
Confidence            99999999999999999999998      777653

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.97  E-value=4.3e-30  Score=266.22  Aligned_cols=185  Identities=18%  Similarity=0.286  Sum_probs=157.8

Q ss_pred             CcCCCC-CHHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEE
Q 010713            1 MKFYEG-SVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG   65 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~--------------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~   65 (503)
                      |||++| +|.+++....              ...+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+
T Consensus       154 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~  233 (382)
T 3tt0_A          154 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIA  233 (382)
T ss_dssp             EECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEEC
T ss_pred             EEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEc
Confidence            799985 9999998643              2469999999999999999999999999999999999999999999999


Q ss_pred             ecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc
Q 010713           66 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR  144 (503)
Q Consensus        66 DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~  144 (503)
                      |||++........ ........+|+.|+|||++.+.   .++.++|||||||++|+|++ |..||.+....+....+.. 
T Consensus       234 DFG~a~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~---~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~-  308 (382)
T 3tt0_A          234 DFGLARDIHHIDY-YKKTTNGRLPVKWMAPEALFDR---IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE-  308 (382)
T ss_dssp             SCSCCCCSSCCCT-TCCCTTCCCGGGGSCHHHHHSC---CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHT-
T ss_pred             ccCcccccccccc-cccccCCCCCcceeCHHHhcCC---CCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-
Confidence            9999976543221 1223345678899999999754   68899999999999999999 9999999888877766654 


Q ss_pred             cCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCc
Q 010713          145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSV  190 (503)
Q Consensus       145 ~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~  190 (503)
                      ......+..+++++.+||.+||+.||++|||+.++++.|+.+....
T Consensus       309 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~  354 (382)
T 3tt0_A          309 GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT  354 (382)
T ss_dssp             TCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred             CCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence            3455667889999999999999999999999999999999886543

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.97  E-value=1.1e-30  Score=270.54  Aligned_cols=190  Identities=12%  Similarity=0.150  Sum_probs=147.1

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCC--
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP--   77 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~--   77 (503)
                      ||||+ |+|.+++.......+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||.+.......  
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~  184 (389)
T 3gni_B          105 TSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQR  184 (389)
T ss_dssp             EECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEE
T ss_pred             EEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeecccccc
Confidence            79998 599999987556789999999999999999999999999999999999999999999999999876542211  


Q ss_pred             --CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccC---------
Q 010713           78 --LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE---------  146 (503)
Q Consensus        78 --~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~---------  146 (503)
                        ..........||+.|+|||++.+. ...++.++|||||||++|+|++|+.||.+.+..+....+.....         
T Consensus       185 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (389)
T 3gni_B          185 QRVVHDFPKYSVKVLPWLSPEVLQQN-LQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTI  263 (389)
T ss_dssp             CSCBCCCCTTCTTTGGGSCHHHHSTT-SSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------------
T ss_pred             ccccccccccccccccccCHHHHhcc-CCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccccc
Confidence              111222345789999999999753 23688999999999999999999999987655444333221110         


Q ss_pred             -----------------------------------CCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcC
Q 010713          147 -----------------------------------IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVH  191 (503)
Q Consensus       147 -----------------------------------~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~  191 (503)
                                                         ..+.+..+++.+.+||.+||+.||.+|||+.|+++      ++|+
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~------hp~f  337 (389)
T 3gni_B          264 PAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN------HSFF  337 (389)
T ss_dssp             ------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT------SGGG
T ss_pred             ccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc------CHHH
Confidence                                               11234568899999999999999999999999998      8888


Q ss_pred             CCCCCC
Q 010713          192 SDGGWT  197 (503)
Q Consensus       192 ~~~~w~  197 (503)
                      ....+.
T Consensus       338 ~~~~~~  343 (389)
T 3gni_B          338 KQIKRR  343 (389)
T ss_dssp             GGC---
T ss_pred             HHHhhc
Confidence            766553

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.97  E-value=3.1e-30  Score=260.10  Aligned_cols=182  Identities=22%  Similarity=0.327  Sum_probs=155.2

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC----cEEEEecCCcccccC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD----RAVLGDVGIPHLLLG   75 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~----~vKL~DFGla~~~~~   75 (503)
                      |||++ |+|.+++.  ....+++.+++.++.||+.||+|||++||+||||||+||+++.++    .++|+|||++.....
T Consensus        94 ~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~  171 (321)
T 2a2a_A           94 LELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED  171 (321)
T ss_dssp             ECCCCSCBHHHHHH--TCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCT
T ss_pred             EEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCc
Confidence            79997 59999996  456799999999999999999999999999999999999999887    799999999977643


Q ss_pred             CCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC--CCCC
Q 010713           76 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--IPSG  153 (503)
Q Consensus        76 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~--~~~~  153 (503)
                          ........||+.|+|||++.+.   .++.++|+|||||++|+|++|..||.+....+....+.......+  .+..
T Consensus       172 ----~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  244 (321)
T 2a2a_A          172 ----GVEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSH  244 (321)
T ss_dssp             ----TCCCCCCCSCGGGCCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTT
T ss_pred             ----cccccccCCCCCccCcccccCC---CCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcc
Confidence                2223456799999999999754   688999999999999999999999999888887777665332211  2257


Q ss_pred             CcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCC
Q 010713          154 LPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWT  197 (503)
Q Consensus       154 ~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~  197 (503)
                      +++.+.+||.+||+.||.+|||+.++++      ++|+...++.
T Consensus       245 ~~~~~~~li~~~l~~dp~~Rps~~e~l~------hp~~~~~~~~  282 (321)
T 2a2a_A          245 TSELAKDFIRKLLVKETRKRLTIQEALR------HPWITPVDNQ  282 (321)
T ss_dssp             CCHHHHHHHHTTSCSSTTTSCCHHHHHH------STTTSCSSHH
T ss_pred             cCHHHHHHHHHHcCCChhhCcCHHHHhc------CccccCCCcc
Confidence            8999999999999999999999999998      8888766654

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.97  E-value=1.2e-30  Score=260.48  Aligned_cols=183  Identities=16%  Similarity=0.310  Sum_probs=154.4

Q ss_pred             CcCCC-CCHHHHHHhhcC----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEc
Q 010713            1 MKFYE-GSVGDRMAQLKG----------------------GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN   57 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~----------------------~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld   57 (503)
                      |||++ |+|.+++.....                      ..+++.+++.++.||+.||+|||++||+||||||+||+++
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~  184 (314)
T 2ivs_A          105 VEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVA  184 (314)
T ss_dssp             EECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE
T ss_pred             EeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEc
Confidence            78998 699999986432                      3489999999999999999999999999999999999999


Q ss_pred             cCCcEEEEecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHH
Q 010713           58 EADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDE  136 (503)
Q Consensus        58 ~~~~vKL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e  136 (503)
                      .++.+||+|||++........ ........+++.|+|||.+.+.   .++.++|||||||++|+|++ |..||.+....+
T Consensus       185 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~  260 (314)
T 2ivs_A          185 EGRKMKISDFGLSRDVYEEDS-YVKRSQGRIPVKWMAIESLFDH---IYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER  260 (314)
T ss_dssp             TTTEEEECCCTTCEECTTTSC-EECSSCCCSCGGGCCHHHHHHC---EECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred             CCCCEEEcccccccccccccc-ceeccCCCCcccccChhhhcCC---CcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            999999999999976543211 1122344577889999998743   57899999999999999999 999999888877


Q ss_pred             HHHHHHhccCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          137 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       137 ~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      ....+.. ......+..+++.+.++|.+||+.||.+||++.++++.|+.+..
T Consensus       261 ~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  311 (314)
T 2ivs_A          261 LFNLLKT-GHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV  311 (314)
T ss_dssp             HHHHHHT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHhhc-CCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            7666544 34556778899999999999999999999999999999998754

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=3.5e-30  Score=261.83  Aligned_cols=185  Identities=19%  Similarity=0.327  Sum_probs=149.9

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.. ....+++.+++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++.........
T Consensus       125 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~  203 (333)
T 1mqb_A          125 TEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA  203 (333)
T ss_dssp             EECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC----------
T ss_pred             EeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhcccccc
Confidence            799986 99999975 4567999999999999999999999999999999999999999999999999999776432211


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........+++.|+|||++.+.   .++.++|||||||++|+|++ |..||.+....+....+... ...+.+..+++.+
T Consensus       204 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~l  279 (333)
T 1mqb_A          204 TYTTSGGKIPIRWTAPEAISYR---KFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG-FRLPTPMDCPSAI  279 (333)
T ss_dssp             -------CCCGGGSCHHHHHSC---CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-CCCCCCTTCBHHH
T ss_pred             ccccCCCCccccccCchhcccC---CCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCC-CcCCCcccCCHHH
Confidence            1122234567889999999743   68899999999999999999 99999988888777766543 3455677899999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccCc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNSV  190 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~  190 (503)
                      .++|.+||+.||.+||++.++++.|+.+....
T Consensus       280 ~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~  311 (333)
T 1mqb_A          280 YQLMMQCWQQERARRPKFADIVSILDKLIRAP  311 (333)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999876543

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=3.2e-30  Score=255.46  Aligned_cols=186  Identities=17%  Similarity=0.270  Sum_probs=153.7

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCC-
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL-   78 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~-   78 (503)
                      |||+. |+|.+++.. ....+++.+++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++........ 
T Consensus       102 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~  180 (298)
T 3pls_A          102 LPYMCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYY  180 (298)
T ss_dssp             ECCCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGG
T ss_pred             EecccCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCccc
Confidence            67886 699999964 457799999999999999999999999999999999999999999999999999975533211 


Q ss_pred             CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHH
Q 010713           79 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA  157 (503)
Q Consensus        79 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~  157 (503)
                      .........+++.|+|||.+.+.   .++.++|||||||++|+|++ +.+||...+..+....+.. ......+..+++.
T Consensus       181 ~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  256 (298)
T 3pls_A          181 SVQQHRHARLPVKWTALESLQTY---RFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQ-GRRLPQPEYCPDS  256 (298)
T ss_dssp             CSCCSSCTTCGGGGSCHHHHTTC---CCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHT-TCCCCCCTTCCHH
T ss_pred             ccccCcCCCCCccccChhhhccC---CCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhc-CCCCCCCccchHH
Confidence            12223345678899999999754   68899999999999999999 5555666666665555543 4455667889999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcC
Q 010713          158 VENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVH  191 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~  191 (503)
                      +.++|.+||+.||.+|||+.++++.|+++...+.
T Consensus       257 l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~  290 (298)
T 3pls_A          257 LYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL  290 (298)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999877654

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.97  E-value=2e-30  Score=255.56  Aligned_cols=174  Identities=20%  Similarity=0.303  Sum_probs=148.3

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++..  ...+++.+++.++.||+.||+|||++||+||||||+||+++.++.++|+|||++.....    
T Consensus        88 ~e~~~~~~l~~~l~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~----  161 (279)
T 3fdn_A           88 LEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS----  161 (279)
T ss_dssp             ECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC------
T ss_pred             EecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCc----
Confidence            799985 99999974  36699999999999999999999999999999999999999999999999998855422    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                       .......|++.|+|||++.+.   .++.++||||||+++|+|++|..||......+....+..  ....++..+++.+.
T Consensus       162 -~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  235 (279)
T 3fdn_A          162 -SRRTDLCGTLDYLPPEMIEGR---MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGAR  235 (279)
T ss_dssp             -------CCCCTTCCHHHHTTC---CCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH--TCCCCCTTSCHHHH
T ss_pred             -ccccccCCCCCccCHhHhccC---CCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHh--CCCCCCCcCCHHHH
Confidence             222355789999999999754   678899999999999999999999999888887777655  34456778999999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          160 NVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      +||.+||+.||.+|||+.|+++      ++|+.
T Consensus       236 ~li~~~l~~~p~~Rps~~e~l~------h~~~~  262 (279)
T 3fdn_A          236 DLISRLLKHNPSQRPMLREVLE------HPWIT  262 (279)
T ss_dssp             HHHHHHCCSSGGGSCCHHHHHH------CHHHH
T ss_pred             HHHHHHhccChhhCCCHHHHhh------Ccccc
Confidence            9999999999999999999999      66654

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=3.6e-30  Score=266.65  Aligned_cols=180  Identities=19%  Similarity=0.302  Sum_probs=151.4

Q ss_pred             CcCCCCCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEc-cCCcEEEEecCCcccccCCC
Q 010713            1 MKFYEGSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN-EADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~GSL~d~L~~~--~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld-~~~~vKL~DFGla~~~~~~~   77 (503)
                      |||++|+|.+.+...  ....+++..+..++.||+.||+|||++||+||||||+||+++ .++.+||+|||++.....  
T Consensus       117 ~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~--  194 (383)
T 3eb0_A          117 MEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIP--  194 (383)
T ss_dssp             ECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCT--
T ss_pred             EecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCC--
Confidence            799999998888753  467899999999999999999999999999999999999998 578999999999986543  


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC---------
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP---------  148 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~---------  148 (503)
                        ........+|+.|+|||++.+.  ..++.++|||||||++|+|++|+.||.+.+..+....+......+         
T Consensus       195 --~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~  270 (383)
T 3eb0_A          195 --SEPSVAYICSRFYRAPELMLGA--TEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMN  270 (383)
T ss_dssp             --TSCCCCCCCCSSCCCHHHHTTC--SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHC
T ss_pred             --CCCCcCcccCCCccCHHHhcCC--CCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhC
Confidence              2233456789999999998753  248899999999999999999999999988877776665422211         


Q ss_pred             ------------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          149 ------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       149 ------------------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                                        .++..+++++.+||.+||+.||.+|||+.|+++      |+|+.
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~------hp~f~  326 (383)
T 3eb0_A          271 PHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA------HPFFD  326 (383)
T ss_dssp             TTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT------SGGGH
T ss_pred             cccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc------CHHHH
Confidence                              034568899999999999999999999999998      66654

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.97  E-value=2.3e-30  Score=260.03  Aligned_cols=177  Identities=18%  Similarity=0.173  Sum_probs=146.2

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEcc-------------------CCc
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE-------------------ADR   61 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~-------------------~~~   61 (503)
                      |||++++|.+++.......+++.++..++.||+.||+|||++||+||||||+|||++.                   ++.
T Consensus        96 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~  175 (339)
T 1z57_A           96 FELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPD  175 (339)
T ss_dssp             EECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCC
T ss_pred             EcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCC
Confidence            7999889999998655567999999999999999999999999999999999999987                   667


Q ss_pred             EEEEecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 010713           62 AVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV  141 (503)
Q Consensus        62 vKL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i  141 (503)
                      +||+|||++.....      ......||+.|+|||++.+.   .++.++|||||||++|+|++|..||...+..+....+
T Consensus       176 ~kl~Dfg~~~~~~~------~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~  246 (339)
T 1z57_A          176 IKVVDFGSATYDDE------HHSTLVSTRHYRAPEVILAL---GWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMM  246 (339)
T ss_dssp             EEECCCSSCEETTS------CCCSSCSCGGGCCHHHHTTS---CCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHH
T ss_pred             ceEeeCcccccCcc------ccccccCCccccChHHhhCC---CCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence            99999999976432      23456789999999999754   6889999999999999999999999988776655444


Q ss_pred             HhccCCC------------------------------------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHH
Q 010713          142 VRRQEIP------------------------------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDI  179 (503)
Q Consensus       142 ~~~~~~~------------------------------------------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~el  179 (503)
                      .......                                          ..+...++.+.+||.+||+.||.+|||+.|+
T Consensus       247 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~el  326 (339)
T 1z57_A          247 ERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREA  326 (339)
T ss_dssp             HHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             HHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHH
Confidence            3221110                                          0112335789999999999999999999999


Q ss_pred             HHHHHhhccCcCC
Q 010713          180 LRVFKSSQNSVHS  192 (503)
Q Consensus       180 L~~L~~i~~~~~~  192 (503)
                      ++      ++|+.
T Consensus       327 l~------hp~f~  333 (339)
T 1z57_A          327 LK------HPFFD  333 (339)
T ss_dssp             TT------SGGGG
T ss_pred             hc------CHHHH
Confidence            98      77665

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.97  E-value=2.2e-30  Score=262.88  Aligned_cols=183  Identities=18%  Similarity=0.317  Sum_probs=148.6

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||+. |+|.+++.. ....+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++........ 
T Consensus        95 ~~~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~-  172 (327)
T 3lzb_A           95 TQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK-  172 (327)
T ss_dssp             ECCCSSCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC----------
T ss_pred             EEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccc-
Confidence            46776 699999975 456799999999999999999999999999999999999999999999999999976543221 


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........+|+.|+|||++.+.   .++.++|||||||++|+|++ |..||.+....+....+.. ....+.+..++.++
T Consensus       173 ~~~~~~~~~t~~y~aPE~~~~~---~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l  248 (327)
T 3lzb_A          173 EYHAEGGKVPIKWMALESILHR---IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK-GERLPQPPICTIDV  248 (327)
T ss_dssp             -------CCCGGGSCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT-TCCCCCCTTBCHHH
T ss_pred             cccccCCCccccccCHHHHcCC---CCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc-CCCCCCCccCCHHH
Confidence            1122344567889999999744   68899999999999999999 9999998887776665543 44566778899999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      .++|.+||+.||.+||++.++++.|+.+...
T Consensus       249 ~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  279 (327)
T 3lzb_A          249 YMIMRKCWMIDADSRPKFRELIIEFSKMARD  279 (327)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred             HHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence            9999999999999999999999999988653

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.97  E-value=1.4e-30  Score=258.96  Aligned_cols=183  Identities=18%  Similarity=0.328  Sum_probs=150.5

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.. ....+++.+++.++.||+.||+|||++||+||||||+||+++.++.++|+|||++.........
T Consensus       104 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  182 (302)
T 4e5w_A          104 MEFLPSGSLKEYLPK-NKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEY  182 (302)
T ss_dssp             EECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCE
T ss_pred             EEeCCCCcHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccccccCCCcc
Confidence            789985 99999965 4567999999999999999999999999999999999999999999999999999876543222


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCC--------------ChHHHHHHHHhcc
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR--------------SVDEIYDAVVRRQ  145 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~--------------~~~e~~~~i~~~~  145 (503)
                      ........+|..|+|||++.+.   .++.++||||||+++|+|++|..|+...              .............
T Consensus       183 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (302)
T 4e5w_A          183 YTVKDDRDSPVFWYAPECLMQS---KFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEG  259 (302)
T ss_dssp             EECCCCTTCCGGGCCHHHHHHC---EEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTT
T ss_pred             eeccCCCCCCccccCCeeecCC---CCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhcc
Confidence            2233455688889999998744   5778999999999999999999875321              1222233333444


Q ss_pred             CCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhc
Q 010713          146 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQ  187 (503)
Q Consensus       146 ~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~  187 (503)
                      ...+.+..+++.+.+||.+||+.||.+|||+.++++.|+++.
T Consensus       260 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          260 KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence            556677889999999999999999999999999999998864

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.97  E-value=2.4e-30  Score=255.19  Aligned_cols=181  Identities=19%  Similarity=0.381  Sum_probs=151.0

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.. ....+++.++..++.||+.||+|||++||+||||||+||+++.++.+||+|||++.......  
T Consensus        91 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--  167 (281)
T 3cc6_A           91 MELYPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDED--  167 (281)
T ss_dssp             EECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC------
T ss_pred             EecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCccccccc--
Confidence            68998 599999975 45669999999999999999999999999999999999999999999999999987654321  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........+++.|+|||++.+.   .++.++||||||+++|+|++ |..||......+....+.. ....+.+..+++.+
T Consensus       168 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l  243 (281)
T 3cc6_A          168 YYKASVTRLPIKWMSPESINFR---RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEK-GDRLPKPDLCPPVL  243 (281)
T ss_dssp             -----CCCCCGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHH-TCCCCCCTTCCHHH
T ss_pred             ccccccCCCCcceeCchhhccC---CCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhc-CCCCCCCCCCCHHH
Confidence            1122344567899999999743   68899999999999999998 9999988777766655544 34455677899999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      .++|.+||+.||.+||++.++++.|+.+..
T Consensus       244 ~~li~~~l~~~p~~Rps~~ell~~L~~~~~  273 (281)
T 3cc6_A          244 YTLMTRCWDYDPSDRPRFTELVCSLSDVYQ  273 (281)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence            999999999999999999999999988753

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.97  E-value=4.7e-30  Score=270.79  Aligned_cols=191  Identities=18%  Similarity=0.199  Sum_probs=145.3

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC-
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP-   79 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~-   79 (503)
                      |||++|+|.+++.  ....+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++........ 
T Consensus       109 ~e~~~~~L~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~  186 (432)
T 3n9x_A          109 LEIADSDLKKLFK--TPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTN  186 (432)
T ss_dssp             EECCSEEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC-------
T ss_pred             EecCCcCHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCccccccccccc
Confidence            7899999999996  4567999999999999999999999999999999999999999999999999999876432111 


Q ss_pred             ------------------CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCC-----------CCCC
Q 010713           80 ------------------SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGV-----------QPRC  130 (503)
Q Consensus        80 ------------------~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~-----------~Pf~  130 (503)
                                        .......+||+.|+|||++...  ..++.++|||||||++|||++|.           ++|.
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~--~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~  264 (432)
T 3n9x_A          187 IVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQ--ENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFP  264 (432)
T ss_dssp             ------------------------CCCCCTTCCHHHHTTC--SCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCC
T ss_pred             ccccccccccccccccchhccccCCCCCccccCHHHHhcC--CCCCcccccchHHHHHHHHHhcccccccccccccccCC
Confidence                              0123567899999999987532  36899999999999999999844           4444


Q ss_pred             CCC-----------------hHHHHHHHHhccCC------------------------CCC-----CCCCcHHHHHHHHH
Q 010713          131 GRS-----------------VDEIYDAVVRRQEI------------------------PPI-----PSGLPPAVENVLLG  164 (503)
Q Consensus       131 ~~~-----------------~~e~~~~i~~~~~~------------------------~~~-----~~~~s~~l~~LI~~  164 (503)
                      +.+                 ..+....+......                        .+.     ...+++++.+||.+
T Consensus       265 g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~  344 (432)
T 3n9x_A          265 GSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLES  344 (432)
T ss_dssp             CSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHH
T ss_pred             CccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHH
Confidence            432                 11222222111111                        111     14589999999999


Q ss_pred             hhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCCCCC
Q 010713          165 CFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGHGS  201 (503)
Q Consensus       165 cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~~~~  201 (503)
                      ||+.||.+|||+.|+++      |+|+....|...+.
T Consensus       345 mL~~dP~~R~ta~e~L~------Hp~f~~~~~~~~e~  375 (432)
T 3n9x_A          345 MLKFNPNKRITIDQALD------HPYLKDVRKKKLEN  375 (432)
T ss_dssp             HSCSSTTTSCCHHHHHT------CGGGTTTCCTTTC-
T ss_pred             HhcCCcccCCCHHHHhc------ChhhhhccCcccCc
Confidence            99999999999999998      99999888876654

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.97  E-value=3.7e-30  Score=270.84  Aligned_cols=184  Identities=20%  Similarity=0.222  Sum_probs=150.8

Q ss_pred             CcCCCCCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC-CcEEEEecCCcccccCCC
Q 010713            1 MKFYEGSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA-DRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~GSL~d~L~~~--~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~-~~vKL~DFGla~~~~~~~   77 (503)
                      |||++++|.+++...  ....+++..+..++.||+.||+|||++||+||||||+|||++.+ +.+||+|||+++....  
T Consensus       132 ~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~--  209 (420)
T 1j1b_A          132 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--  209 (420)
T ss_dssp             EECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCT--
T ss_pred             hhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhccc--
Confidence            789999888887643  46789999999999999999999999999999999999999965 5689999999987543  


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC---------
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP---------  148 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~---------  148 (503)
                        ........+|+.|+|||++.+.  ..++.++|||||||++|||++|+.||.+.+..+.+..+......+         
T Consensus       210 --~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~  285 (420)
T 1j1b_A          210 --GEPNVSYICSRYYRAPELIFGA--TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN  285 (420)
T ss_dssp             --TCCCCSCCSCTTSCCHHHHTTC--SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHC
T ss_pred             --CCCceeeeeCCCcCCHHHHcCC--CCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhC
Confidence              2223456789999999998743  258899999999999999999999999988776665554421111         


Q ss_pred             ------C------------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCC
Q 010713          149 ------P------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGW  196 (503)
Q Consensus       149 ------~------------~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w  196 (503)
                            .            ++..+++++.+||.+||+.||.+||++.|+++      |+|+....+
T Consensus       286 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~------hp~f~~~~~  345 (420)
T 1j1b_A          286 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA------HSFFDELRD  345 (420)
T ss_dssp             SCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT------SGGGGGGGC
T ss_pred             hhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC------CHhhccccc
Confidence                  0            23457899999999999999999999999998      888765443

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.97  E-value=1.2e-30  Score=261.99  Aligned_cols=181  Identities=22%  Similarity=0.379  Sum_probs=141.2

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++..  .+.+++.+++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++.........
T Consensus        95 ~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~  172 (311)
T 3ork_A           95 MEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS  172 (311)
T ss_dssp             EECCCEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC---------
T ss_pred             EecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccccc
Confidence            79998 599999974  457999999999999999999999999999999999999999999999999999766443222


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC--CCCCCcHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--IPSGLPPA  157 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~--~~~~~s~~  157 (503)
                      ........||+.|+|||++.+.   .++.++|||||||++|+|++|+.||.+....+...........++  ....++++
T Consensus       173 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (311)
T 3ork_A          173 VTQTAAVIGTAQYLSPEQARGD---SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSAD  249 (311)
T ss_dssp             ---------CCTTCCHHHHHTC---CCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHH
T ss_pred             cccccccCcCcccCCHHHhcCC---CCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHH
Confidence            2333456789999999999754   688999999999999999999999999888777666655433322  23568999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHH-HHHhh
Q 010713          158 VENVLLGCFEYDLRSRPLMTDILR-VFKSS  186 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS~~elL~-~L~~i  186 (503)
                      +.++|.+||+.||.+||+..+++. .|...
T Consensus       250 l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          250 LDAVVLKALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             HHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence            999999999999999997666554 55444

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.97  E-value=1.6e-30  Score=276.03  Aligned_cols=183  Identities=21%  Similarity=0.372  Sum_probs=156.4

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.......+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++......  
T Consensus       261 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~--  338 (454)
T 1qcf_A          261 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE--  338 (454)
T ss_dssp             ECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH--
T ss_pred             EeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc--
Confidence            79997 599999975444578999999999999999999999999999999999999999999999999997653211  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........+++.|+|||++..   +.++.++|||||||++|||++ |..||.+.+..+....+... ...+.+..+++.+
T Consensus       339 ~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~-~~~~~~~~~~~~l  414 (454)
T 1qcf_A          339 YTAREGAKFPIKWTAPEAINF---GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-YRMPRPENCPEEL  414 (454)
T ss_dssp             HHTTCSSSSCGGGSCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHT-CCCCCCTTSCHHH
T ss_pred             eeccCCCcccccccCHHHhcc---CCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCCHHH
Confidence            111223456778999999974   368999999999999999999 99999999888887776553 4556678899999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      .+||.+||+.||++|||+.++++.|+.+...
T Consensus       415 ~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~  445 (454)
T 1qcf_A          415 YNIMMRCWKNRPEERPTFEYIQSVLDDFYTA  445 (454)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred             HHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence            9999999999999999999999999987543

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.97  E-value=2.4e-30  Score=258.51  Aligned_cols=189  Identities=17%  Similarity=0.209  Sum_probs=144.0

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.  ....+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||++......   
T Consensus        81 ~e~~~~~~l~~~~~--~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---  155 (311)
T 4agu_A           81 FEYCDHTVLHELDR--YQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGP---  155 (311)
T ss_dssp             EECCSEEHHHHHHH--TSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred             EEeCCCchHHHHHh--hhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc---
Confidence            789997 5666654  4567999999999999999999999999999999999999999999999999999775431   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC------------
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI------------  147 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~------------  147 (503)
                      ........+|+.|+|||++.+.  ..++.++||||||+++|+|++|..||.+....+....+......            
T Consensus       156 ~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (311)
T 4agu_A          156 SDYYDDEVATRWYRSPELLVGD--TQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTN  233 (311)
T ss_dssp             ----------GGGCCHHHHHTC--SCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTC
T ss_pred             ccccCCCcCCccccChHHHhcC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccc
Confidence            2223455789999999998642  35789999999999999999999999988877665554332110            


Q ss_pred             -------CCC----------CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCCCCCc
Q 010713          148 -------PPI----------PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGHGSR  202 (503)
Q Consensus       148 -------~~~----------~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~~~~~  202 (503)
                             .+.          ...+++.+.+||.+||+.||.+|||+.++++      ++|+....+.....+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~------hp~f~~~~~~~~~~~  299 (311)
T 4agu_A          234 QYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH------HPYFENIREIEDLAK  299 (311)
T ss_dssp             GGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT------SGGGTTCC-------
T ss_pred             cccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc------ChHHHhccCHHHHHH
Confidence                   000          1467889999999999999999999999998      999887766554333

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.97  E-value=1.8e-30  Score=255.68  Aligned_cols=179  Identities=18%  Similarity=0.320  Sum_probs=148.6

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.......+++.+++.++.|++.||+|||++||+|+||||+||+++.++.++|+|||++.....    
T Consensus        94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~----  169 (278)
T 1byg_A           94 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS----  169 (278)
T ss_dssp             ECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred             EecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccccccccc----
Confidence            799986 999999764444589999999999999999999999999999999999999999999999999875432    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                        ......+++.|+|||.+.+.   .++.++||||||+++|+|++ |..||......+....+.. ...+..+..+++.+
T Consensus       170 --~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l  243 (278)
T 1byg_A          170 --TQDTGKLPVKWTAPEALREK---KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK-GYKMDAPDGCPPAV  243 (278)
T ss_dssp             --------CCTTTSCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTT-TCCCCCCTTCCHHH
T ss_pred             --cccCCCccccccCHHHhCCC---CCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc-CCCCCCcccCCHHH
Confidence              12234678899999998743   68899999999999999998 9999998887777666543 34556678899999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      .++|.+||+.||.+||++.++++.|+.+...
T Consensus       244 ~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~  274 (278)
T 1byg_A          244 YEVMKNCWHLDAAMRPSFLQLREQLEHIKTH  274 (278)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence            9999999999999999999999999987643

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.97  E-value=5.1e-30  Score=252.59  Aligned_cols=178  Identities=20%  Similarity=0.293  Sum_probs=151.3

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCc---EEEEecCCcccccCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR---AVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~---vKL~DFGla~~~~~~   76 (503)
                      |||++| +|.+.+..  ...+++.++..++.||+.||+|||++||+||||||+||+++.++.   +||+|||++..... 
T Consensus        84 ~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~-  160 (284)
T 3kk8_A           84 FDLVTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND-  160 (284)
T ss_dssp             ECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS-
T ss_pred             EecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc-
Confidence            789985 89888874  467999999999999999999999999999999999999987655   99999999976543 


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCC--CCCC
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPI--PSGL  154 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~--~~~~  154 (503)
                         ........||+.|+|||++.+.   .++.++||||||+++|+|++|..||.+....+....+.......+.  ...+
T Consensus       161 ---~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
T 3kk8_A          161 ---SEAWHGFAGTPGYLSPEVLKKD---PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTV  234 (284)
T ss_dssp             ---SCBCCCSCSCGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTS
T ss_pred             ---CccccCCCCCcCCcCchhhcCC---CCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhccc
Confidence               2223456799999999999754   6789999999999999999999999998888888777665443332  2578


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      ++.+.+||.+||+.||++|||+.++++      ++|+..
T Consensus       235 ~~~~~~li~~~l~~dp~~Rps~~~~l~------h~~~~~  267 (284)
T 3kk8_A          235 TPEAKSLIDSMLTVNPKKRITADQALK------VPWICN  267 (284)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTT------SHHHHS
T ss_pred             CHHHHHHHHHHcccChhhCCCHHHHhc------CccccC
Confidence            999999999999999999999999998      666544

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.97  E-value=3e-30  Score=259.58  Aligned_cols=184  Identities=22%  Similarity=0.344  Sum_probs=147.4

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.......+++..++.++.||+.||+|||++||+|+||||+||+++.++.+||+|||++......   
T Consensus       106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~---  182 (326)
T 2x7f_A          106 MEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT---  182 (326)
T ss_dssp             EECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC--------
T ss_pred             EEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCceecCcC---
Confidence            799986 9999998655678999999999999999999999999999999999999999999999999998765321   


Q ss_pred             CCCCCCccCCCCCCCccccCCCC--CCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA  157 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~--~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~  157 (503)
                      ........|++.|+|||++....  ...++.++|||||||++|+|++|..||.+.........+.........+..++..
T Consensus       183 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (326)
T 2x7f_A          183 VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKK  262 (326)
T ss_dssp             --------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCSCSCHH
T ss_pred             ccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccccCCccccCHH
Confidence            11233457899999999986321  2357899999999999999999999999888777666665544444445778999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          158 VENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      +.+||.+||..||.+||++.++++      ++|+..
T Consensus       263 l~~li~~~l~~dp~~Rps~~~ll~------hp~~~~  292 (326)
T 2x7f_A          263 FQSFIESCLVKNHSQRPATEQLMK------HPFIRD  292 (326)
T ss_dssp             HHHHHHHHCCSSGGGSCCHHHHHT------SHHHHC
T ss_pred             HHHHHHHHhccChhhCCCHHHHhh------ChHHhh
Confidence            999999999999999999999998      666544

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.97  E-value=2.9e-30  Score=277.31  Aligned_cols=197  Identities=19%  Similarity=0.247  Sum_probs=157.8

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEE---ccCCcEEEEecCCcccccCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL---NEADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILl---d~~~~vKL~DFGla~~~~~~~   77 (503)
                      |||++|+|.+++.. ....+++.+++.++.||+.||+|||++||+||||||+|||+   +.++.+||+|||+++......
T Consensus        82 me~~g~sL~~ll~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~  160 (483)
T 3sv0_A           82 MDLLGPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTS  160 (483)
T ss_dssp             EECCCCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred             EECCCCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCc
Confidence            79998899999975 45679999999999999999999999999999999999999   688999999999998765422


Q ss_pred             CC----CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHhccCCC--
Q 010713           78 LP----SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV---DEIYDAVVRRQEIP--  148 (503)
Q Consensus        78 ~~----~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~---~e~~~~i~~~~~~~--  148 (503)
                      ..    ........||+.|+|||++.+.   .++.++|||||||+||+|++|..||.+...   .+.+..+.......  
T Consensus       161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~  237 (483)
T 3sv0_A          161 THQHIPYRENKNLTGTARYASVNTHLGI---EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSI  237 (483)
T ss_dssp             TCCBCCCCCCCCCCSCTTTCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCH
T ss_pred             cccccccccccccCCCccccCHHHhcCC---CCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccH
Confidence            11    1223366899999999999854   688999999999999999999999987443   33333333222111  


Q ss_pred             -CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhcc----CcCCCCCCCCCCC
Q 010713          149 -PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN----SVHSDGGWTGHGS  201 (503)
Q Consensus       149 -~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~----~~~~~~~w~~~~~  201 (503)
                       .+...++.++.+||..||+.||++||++.+|++.|+.+..    .++...+|..+..
T Consensus       238 ~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~~~~~~~dW~~~~~  295 (483)
T 3sv0_A          238 EALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGFQFDYVFDWTILKY  295 (483)
T ss_dssp             HHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCSSCCHHHHHTC
T ss_pred             HHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcCCCccCCcCchhhcc
Confidence             2236789999999999999999999999999998887744    4556667765433

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.97  E-value=3.1e-30  Score=267.31  Aligned_cols=184  Identities=18%  Similarity=0.327  Sum_probs=143.7

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.. ....+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.........
T Consensus       125 ~e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  203 (373)
T 2qol_A          125 TEYMENGSLDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA  203 (373)
T ss_dssp             EECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred             EeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCcc
Confidence            79997 599999974 4457999999999999999999999999999999999999999999999999999776432211


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........+++.|+|||++.+.   .++.++|||||||++|||++ |..||......+....+... ...+.+..++..+
T Consensus       204 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~-~~~~~~~~~~~~l  279 (373)
T 2qol_A          204 AYTTRGGKIPIRWTSPEAIAYR---KFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLPPPMDCPAAL  279 (373)
T ss_dssp             ----------CTTSCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTT-EECCCCTTCBHHH
T ss_pred             ceeccCCCcCCCccChhhhccC---CcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCCCCccccHHH
Confidence            1122233457789999999743   68899999999999999998 99999998888777766543 3445567899999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      .++|.+||+.||.+||++.++++.|+.+...
T Consensus       280 ~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~  310 (373)
T 2qol_A          280 YQLMLDCWQKDRNNRPKFEQIVSILDKLIRN  310 (373)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence            9999999999999999999999999988653

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.97  E-value=3.7e-30  Score=273.18  Aligned_cols=179  Identities=19%  Similarity=0.344  Sum_probs=153.8

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....    
T Consensus       266 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~----  341 (450)
T 1k9a_A          266 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS----  341 (450)
T ss_dssp             EECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred             EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccc----
Confidence            79998 5999999875555689999999999999999999999999999999999999999999999999975422    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                        ......+++.|+|||++.+.   .++.++|||||||++|||++ |..||.+....+....+.. ...+..+..+++.+
T Consensus       342 --~~~~~~~~~~y~aPE~~~~~---~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~-~~~~~~p~~~~~~l  415 (450)
T 1k9a_A          342 --TQDTGKLPVKWTAPEALREK---KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK-GYKMDAPDGCPPAV  415 (450)
T ss_dssp             -------CCCTTTSCHHHHHSS---CCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHT-TCCCCCCTTCCHHH
T ss_pred             --cccCCCCCcceeCHHHhcCC---CCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCCCCCCCcCCHHH
Confidence              11233568899999999743   68999999999999999998 9999998887777766654 34566788999999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      .+||.+||+.||.+|||+.++++.|+.+...
T Consensus       416 ~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~  446 (450)
T 1k9a_A          416 YDVMKNCWHLDAATRPTFLQLREQLEHIRTH  446 (450)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence            9999999999999999999999999987643

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.97  E-value=2.8e-30  Score=251.80  Aligned_cols=181  Identities=18%  Similarity=0.318  Sum_probs=154.0

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.. ....+++.+++.++.|++.||+|||++|++|+||||+||+++.++.++|+|||++.......  
T Consensus        82 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~--  158 (267)
T 3t9t_A           82 TEFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ--  158 (267)
T ss_dssp             ECCCTTCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH--
T ss_pred             EeCCCCCcHHHHHhh-CcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccccccc--
Confidence            79998 599999975 45679999999999999999999999999999999999999999999999999987653211  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........+++.|+|||++.+.   .++.++|+||||+++|+|++ |..||......+....+... .....+..+++.+
T Consensus       159 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~-~~~~~~~~~~~~l  234 (267)
T 3t9t_A          159 YTSSTGTKFPVKWASPEVFSFS---RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-FRLYKPRLASTHV  234 (267)
T ss_dssp             HHSTTSTTCCGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-CCCCCCTTSCHHH
T ss_pred             ccccccccccccccChhhhcCC---CccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcC-CcCCCCccCcHHH
Confidence            1112344567889999999743   67899999999999999999 89999998888877766553 3445667889999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      .++|.+||+.||++||++.++++.|+++..
T Consensus       235 ~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (267)
T 3t9t_A          235 YQIMNHCWRERPEDRPAFSRLLRQLAEIAE  264 (267)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            999999999999999999999999998764

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.97  E-value=1.4e-30  Score=258.39  Aligned_cols=183  Identities=20%  Similarity=0.308  Sum_probs=143.2

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH--------HCCCeecccCCCcEEEccCCcEEEEecCCcc
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLH--------SKGILVLNLKPFNFILNEADRAVLGDVGIPH   71 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLH--------s~gIvHrDLKP~NILld~~~~vKL~DFGla~   71 (503)
                      |||++| +|.+++   ....+++.+++.++.||+.||+|||        +++|+||||||+|||++.++.+||+|||++.
T Consensus        85 ~e~~~~g~L~~~l---~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~  161 (301)
T 3q4u_A           85 THYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV  161 (301)
T ss_dssp             ECCCTTCBHHHHH---TTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             hhhccCCCHHHHH---hhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCee
Confidence            799985 999999   4567999999999999999999999        9999999999999999999999999999997


Q ss_pred             cccCCCCC-CCCCCCccCCCCCCCccccCCCCCC---CCCCccchHHHHHHHHHHHhC----------CCCCCCCC----
Q 010713           72 LLLGIPLP-SSDLPRRLGTPNYMAPEQWQPEVRG---PISFETDSWGFACSIIEMLTG----------VQPRCGRS----  133 (503)
Q Consensus        72 ~~~~~~~~-~~~~~~~~Gt~~Y~APE~l~~~~~~---~~s~ksDIwSLGviLyeLltG----------~~Pf~~~~----  133 (503)
                      ........ ........||+.|+|||++.+....   .++.++|||||||++|+|++|          ..||....    
T Consensus       162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~  241 (301)
T 3q4u_A          162 MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP  241 (301)
T ss_dssp             EEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred             ecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCc
Confidence            65432211 1112345799999999999754211   244689999999999999999          88886532    


Q ss_pred             -hHHHHHHHHhccCCCCCC-----CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhh
Q 010713          134 -VDEIYDAVVRRQEIPPIP-----SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSS  186 (503)
Q Consensus       134 -~~e~~~~i~~~~~~~~~~-----~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i  186 (503)
                       .......+......+..+     ..+++.+.+||.+||+.||.+|||+.++++.|+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          242 SFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             CHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             chhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence             222222222223333333     23557899999999999999999999999999875

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=5.5e-30  Score=264.67  Aligned_cols=179  Identities=22%  Similarity=0.272  Sum_probs=151.5

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++++|.+++..   ..+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||+++....     
T Consensus       109 ~e~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-----  180 (367)
T 1cm8_A          109 MPFMGTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS-----  180 (367)
T ss_dssp             EECCSEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCS-----
T ss_pred             EecCCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeeccccccc-----
Confidence            68998899999864   5799999999999999999999999999999999999999999999999999987532     


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------  148 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~------------  148 (503)
                       ......+|+.|+|||++.+.  ..++.++|||||||++|+|++|+.||.+.+..+.+..+......+            
T Consensus       181 -~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~  257 (367)
T 1cm8_A          181 -EMTGYVVTRWYRAPEVILNW--MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDE  257 (367)
T ss_dssp             -SCCSSCSCGGGCCTHHHHTT--TCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHH
T ss_pred             -ccCcCcCCCCcCCHHHHhCC--CCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHH
Confidence             23456789999999998752  368899999999999999999999999988777666655422211            


Q ss_pred             -----------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCC
Q 010713          149 -----------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGW  196 (503)
Q Consensus       149 -----------------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w  196 (503)
                                       .+...+++.+.+||.+||..||.+|||+.++++      |+|+.....
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~------hp~f~~~~~  316 (367)
T 1cm8_A          258 AKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA------HPYFESLHD  316 (367)
T ss_dssp             HHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH------SGGGTTTC-
T ss_pred             HHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc------ChHHHhhcC
Confidence                             123567899999999999999999999999999      888876443

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.97  E-value=2.4e-30  Score=258.11  Aligned_cols=186  Identities=20%  Similarity=0.295  Sum_probs=149.1

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEc-cCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN-EADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld-~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++|+|.+++.   .+.+++.+++.++.||+.||+|||++||+||||||+||+++ .++.+||+|||++.........
T Consensus       101 ~e~~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~  177 (320)
T 2i6l_A          101 QEYMETDLANVLE---QGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSH  177 (320)
T ss_dssp             EECCSEEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC------
T ss_pred             eeccCCCHHHHhh---cCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCccc
Confidence            7899999999984   56799999999999999999999999999999999999997 5679999999999765432222


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC------------
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI------------  147 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~------------  147 (503)
                      ........+++.|+|||.+.+.  ..++.++|||||||++|+|++|..||.+....+....+......            
T Consensus       178 ~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (320)
T 2i6l_A          178 KGHLSEGLVTKWYRSPRLLLSP--NNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSV  255 (320)
T ss_dssp             --CCCGGGSCCTTCCHHHHHCT--TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTT
T ss_pred             ccccccccccccccCcHHhcCc--ccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhc
Confidence            2233455679999999988642  36889999999999999999999999988877766655443211            


Q ss_pred             -----------C-----CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCC
Q 010713          148 -----------P-----PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWT  197 (503)
Q Consensus       148 -----------~-----~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~  197 (503)
                                 +     .....++.++.+||.+||+.||++|||+.++++      ++|+....|.
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~------hp~~~~~~~p  315 (320)
T 2i6l_A          256 IPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS------HPYMSIYSFP  315 (320)
T ss_dssp             SCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT------SHHHHTTCC-
T ss_pred             CcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC------CcccccccCc
Confidence                       0     012468999999999999999999999999998      7777765553

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.96  E-value=8.4e-31  Score=262.43  Aligned_cols=182  Identities=19%  Similarity=0.333  Sum_probs=146.2

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.. ....+++.+++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++.........
T Consensus        86 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  164 (310)
T 3s95_A           86 TEYIKGGTLRGIIKS-MDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ  164 (310)
T ss_dssp             EECCTTCBHHHHHHH-CCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC-----
T ss_pred             EEecCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceeccccccc
Confidence            799985 99999975 4567999999999999999999999999999999999999999999999999999775432211


Q ss_pred             C-----------CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHHh
Q 010713           80 S-----------SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE-----IYDAVVR  143 (503)
Q Consensus        80 ~-----------~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e-----~~~~i~~  143 (503)
                      .           .......||+.|+|||++.+.   .++.++||||||+++|+|++|..||.......     .......
T Consensus       165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~  241 (310)
T 3s95_A          165 PEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGR---SYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD  241 (310)
T ss_dssp             ---------------CCCCSCGGGCCHHHHTTC---CCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHH
T ss_pred             ccccccccccccccccccCCCcceeCHHHhcCC---CCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccc
Confidence            1           011245799999999999854   68899999999999999999999986532211     0111111


Q ss_pred             ccCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCc
Q 010713          144 RQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSV  190 (503)
Q Consensus       144 ~~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~  190 (503)
                          ...+..+++.+.++|.+||+.||++|||+.++++.|+.+....
T Consensus       242 ----~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~  284 (310)
T 3s95_A          242 ----RYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL  284 (310)
T ss_dssp             ----HTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             ----ccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence                1245678899999999999999999999999999999887544

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.96  E-value=2.6e-30  Score=254.89  Aligned_cols=181  Identities=15%  Similarity=0.230  Sum_probs=153.8

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.. ....+++.+++.++.||+.||+|||++||+||||||+||+++.++.++|+|||++.......  
T Consensus        98 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~--  174 (283)
T 3gen_A           98 TEYMANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--  174 (283)
T ss_dssp             ECCCTTCBHHHHHHC-GGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH--
T ss_pred             EeccCCCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccccccccccc--
Confidence            79997 599999974 34579999999999999999999999999999999999999999999999999997653211  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........+|+.|+|||++.+.   .++.++||||||+++|+|++ |..||......+....+... .....+..+++.+
T Consensus       175 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l  250 (283)
T 3gen_A          175 YTSSVGSKFPVRWSPPEVLMYS---KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG-LRLYRPHLASEKV  250 (283)
T ss_dssp             HHSTTSTTSCGGGCCHHHHHHC---CCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT-CCCCCCTTCCHHH
T ss_pred             cccccCCccCcccCCHHHhccC---CCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcc-cCCCCCCcCCHHH
Confidence            1112334567889999999743   68899999999999999998 99999998888777766543 4455677889999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      .++|.+||+.||.+|||+.++++.|+.+..
T Consensus       251 ~~li~~~l~~~p~~Rps~~~ll~~L~~~~~  280 (283)
T 3gen_A          251 YTIMYSCWHEKADERPTFKILLSNILDVMD  280 (283)
T ss_dssp             HHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence            999999999999999999999999988753

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.96  E-value=3e-30  Score=256.36  Aligned_cols=186  Identities=16%  Similarity=0.275  Sum_probs=153.3

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.. ....+++.+++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++.........
T Consensus       106 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~  184 (298)
T 3f66_A          106 LPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY  184 (298)
T ss_dssp             EECCTTCBHHHHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGC
T ss_pred             EeCCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccchh
Confidence            789986 99999964 4567899999999999999999999999999999999999999999999999999765432211


Q ss_pred             -CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHH
Q 010713           80 -SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA  157 (503)
Q Consensus        80 -~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~  157 (503)
                       ........+|+.|+|||.+.+.   .++.++|+||||+++|+|++ +.+||......+....+... .....+..++..
T Consensus       185 ~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  260 (298)
T 3f66_A          185 SVHNKTGAKLPVKWMALESLQTQ---KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG-RRLLQPEYCPDP  260 (298)
T ss_dssp             BC-----CCBCGGGSCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTT-CCCCCCTTCCHH
T ss_pred             ccccccCCCCCccccChHHhcCC---CCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcC-CCCCCCccCCHH
Confidence             1222345678899999999743   68899999999999999999 67778777666665555443 344557788999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcC
Q 010713          158 VENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVH  191 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~  191 (503)
                      +.++|.+||+.||.+|||+.++++.|+++...+.
T Consensus       261 l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~  294 (298)
T 3f66_A          261 LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  294 (298)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence            9999999999999999999999999999877654

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.96  E-value=1.6e-30  Score=259.66  Aligned_cols=185  Identities=18%  Similarity=0.333  Sum_probs=153.8

Q ss_pred             CcCCCC-CHHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEE
Q 010713            1 MKFYEG-SVGDRMAQLKG--------------GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG   65 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~--------------~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~   65 (503)
                      |||++| +|.+++.....              ..+++.+++.++.||+.||+|||++||+||||||+||+++.++.+||+
T Consensus       111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~  190 (316)
T 2xir_A          111 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC  190 (316)
T ss_dssp             EECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEEC
T ss_pred             EEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEC
Confidence            689985 99999975322              128999999999999999999999999999999999999999999999


Q ss_pred             ecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc
Q 010713           66 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR  144 (503)
Q Consensus        66 DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~  144 (503)
                      |||++....... .........+|+.|+|||++.+.   .++.++|||||||++|+|++ |..||.+....+........
T Consensus       191 Dfg~~~~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~  266 (316)
T 2xir_A          191 DFGLARDIYKDP-DYVRKGDARLPLKWMAPETIFDR---VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE  266 (316)
T ss_dssp             CCGGGSCTTTCT-TSEEETTEEECGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHH
T ss_pred             CCccccccccCc-cceeccCCCcceeecCchhhccc---cccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhcc
Confidence            999987653321 11112345678899999998743   68899999999999999998 99999887655555555555


Q ss_pred             cCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       145 ~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      ......+..+++.+.++|.+||+.||.+|||+.++++.|+.+...
T Consensus       267 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  311 (316)
T 2xir_A          267 GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  311 (316)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence            556667788999999999999999999999999999999987653

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.96  E-value=2.6e-30  Score=254.41  Aligned_cols=183  Identities=19%  Similarity=0.319  Sum_probs=155.0

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.......+++.+++.++.|++.||+|||++||+||||||+||+++.++.++|+|||++.......  
T Consensus        86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--  163 (279)
T 1qpc_A           86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE--  163 (279)
T ss_dssp             EECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC--
T ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcc--
Confidence            78997 599999965333479999999999999999999999999999999999999999999999999997764321  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........+++.|+|||++.+.   .++.++||||||+++|+|++ |..||.+....+....+... .....+..+++.+
T Consensus       164 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l  239 (279)
T 1qpc_A          164 YTAREGAKFPIKWTAPEAINYG---TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-YRMVRPDNCPEEL  239 (279)
T ss_dssp             EECCTTCCCCTTTSCHHHHHHC---EECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-CCCCCCTTCCHHH
T ss_pred             cccccCCCCccCccChhhhccC---CCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcc-cCCCCcccccHHH
Confidence            1122344567899999999743   57889999999999999999 99999998888777666543 3455677899999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      .++|.+||+.||++|||+.++++.|+.+...
T Consensus       240 ~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  270 (279)
T 1qpc_A          240 YQLMRLCWKERPEDRPTFDYLRSVLEDFFTA  270 (279)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence            9999999999999999999999999987654

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.96  E-value=7.8e-30  Score=261.63  Aligned_cols=180  Identities=18%  Similarity=0.282  Sum_probs=141.3

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEcc---CCcEEEEecCCcccccCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE---ADRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~---~~~vKL~DFGla~~~~~~   76 (503)
                      |||++ |+|.+++.  ..+.+++.+++.++.||+.||+|||++||+||||||+|||++.   ++.+||+|||++..... 
T Consensus       127 ~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~-  203 (349)
T 2w4o_A          127 LELVTGGELFDRIV--EKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH-  203 (349)
T ss_dssp             ECCCCSCBHHHHHT--TCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred             EEeCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCc-
Confidence            79998 59999996  4567999999999999999999999999999999999999975   78999999999876533 


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhccCCC--CCCCC
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE-IYDAVVRRQEIP--PIPSG  153 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e-~~~~i~~~~~~~--~~~~~  153 (503)
                         ........||+.|+|||++.+.   .++.++|||||||++|+|++|..||......+ .+..+.......  +....
T Consensus       204 ---~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~  277 (349)
T 2w4o_A          204 ---QVLMKTVCGTPGYCAPEILRGC---AYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDE  277 (349)
T ss_dssp             ------------CGGGSCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTT
T ss_pred             ---ccccccccCCCCccCHHHhcCC---CCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhh
Confidence               1223456789999999999854   68899999999999999999999998765544 455555433222  23367


Q ss_pred             CcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCC
Q 010713          154 LPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGG  195 (503)
Q Consensus       154 ~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~  195 (503)
                      ++.++.+||.+||+.||++|||+.++++      ++|+....
T Consensus       278 ~~~~~~~li~~~L~~dP~~Rpt~~e~l~------hp~~~~~~  313 (349)
T 2w4o_A          278 VSLNAKDLVRKLIVLDPKKRLTTFQALQ------HPWVTGKA  313 (349)
T ss_dssp             SCHHHHHHHHTTSCSSGGGSCCHHHHHH------STTTTSTT
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHhc------CcccCCCc
Confidence            8999999999999999999999999998      88876543

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.96  E-value=3.1e-30  Score=263.04  Aligned_cols=177  Identities=22%  Similarity=0.306  Sum_probs=141.4

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||.+|+|.+++.  ....+++.++..++.||+.||+|||++||+||||||+|||++ ++.+||+|||++....... ..
T Consensus        88 ~e~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~-~~  163 (343)
T 3dbq_A           88 MECGNIDLNSWLK--KKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT-TS  163 (343)
T ss_dssp             ECCCSEEHHHHHH--HSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-------
T ss_pred             EeCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCccc-cc
Confidence            7877889999997  456799999999999999999999999999999999999997 6789999999997654321 11


Q ss_pred             CCCCCccCCCCCCCccccCCC--------CCCCCCCccchHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHhccCCCCCC
Q 010713           81 SDLPRRLGTPNYMAPEQWQPE--------VRGPISFETDSWGFACSIIEMLTGVQPRCGRSV-DEIYDAVVRRQEIPPIP  151 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~--------~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-~e~~~~i~~~~~~~~~~  151 (503)
                      .......||+.|+|||++.+.        ....++.++|||||||++|+|++|..||..... ......+........++
T Consensus       164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  243 (343)
T 3dbq_A          164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP  243 (343)
T ss_dssp             ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCC
T ss_pred             ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCc
Confidence            123356799999999998531        124688999999999999999999999987433 34444555545556677


Q ss_pred             CCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          152 SGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       152 ~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ...+..+.+||.+||+.||.+|||+.++++
T Consensus       244 ~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~  273 (343)
T 3dbq_A          244 DIPEKDLQDVLKCCLKRDPKQRISIPELLA  273 (343)
T ss_dssp             CCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence            888899999999999999999999999998

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.96  E-value=1.8e-30  Score=263.39  Aligned_cols=183  Identities=21%  Similarity=0.263  Sum_probs=148.4

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+| +|.+++.  ....+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++....... .
T Consensus        84 ~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~-~  160 (323)
T 3tki_A           84 LEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-R  160 (323)
T ss_dssp             EECCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETT-E
T ss_pred             EEcCCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCC-c
Confidence            799986 9999885  45679999999999999999999999999999999999999999999999999997653211 1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD-EIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........||+.|+|||++.+..  .++.++|||||||++|+|++|..||...... ..+...............+++.+
T Consensus       161 ~~~~~~~~gt~~y~aPE~~~~~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (323)
T 3tki_A          161 ERLLNKMCGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP  238 (323)
T ss_dssp             ECCBCSCCSCGGGSCHHHHHCSS--BCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHH
T ss_pred             ccccCCCccCcCccCcHHhccCC--CCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHH
Confidence            12234568999999999997431  2467899999999999999999999876543 33333333333333346789999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCC
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDG  194 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~  194 (503)
                      .+||.+||+.||.+|||+.|+++      ++|+...
T Consensus       239 ~~li~~~L~~dP~~R~t~~eil~------h~~~~~~  268 (323)
T 3tki_A          239 LALLHKILVENPSARITIPDIKK------DRWYNKP  268 (323)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHTT------CTTTTCC
T ss_pred             HHHHHHHccCChhhCcCHHHHhh------Chhhccc
Confidence            99999999999999999999988      8887643

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.96  E-value=6.1e-30  Score=260.14  Aligned_cols=187  Identities=16%  Similarity=0.198  Sum_probs=150.3

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++|+|.+++..   ..+++.++..++.||+.||+|||++||+||||||+||+++.++.+||+|||++..........
T Consensus        93 ~e~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~  169 (353)
T 2b9h_A           93 QELMQTDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADN  169 (353)
T ss_dssp             ECCCSEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC------
T ss_pred             EeccCccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccccccccc
Confidence            78999999999863   579999999999999999999999999999999999999999999999999997754321111


Q ss_pred             -------CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC----
Q 010713           81 -------SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP----  149 (503)
Q Consensus        81 -------~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~----  149 (503)
                             .......||+.|+|||++.+.  ..++.++|||||||++|+|++|..||.+.+..+....+......+.    
T Consensus       170 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  247 (353)
T 2b9h_A          170 SEPTGQQSGMVEFVATRWYRAPEVMLTS--AKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDND  247 (353)
T ss_dssp             ----------CCCCCCGGGCCHHHHHSC--CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTT
T ss_pred             cCccccccchhhccccccccCCeeeccC--CCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhcc
Confidence                   112345789999999987532  3688999999999999999999999998877665554433211110    


Q ss_pred             --------------------------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCC
Q 010713          150 --------------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTG  198 (503)
Q Consensus       150 --------------------------~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~  198 (503)
                                                ....+++++.+||.+||+.||++|||+.++++      ++|+....+..
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~------hp~~~~~~~~~  316 (353)
T 2b9h_A          248 LRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE------HPYLQTYHDPN  316 (353)
T ss_dssp             TTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT------SGGGTTTCCTT
T ss_pred             ccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc------CccccccCCcc
Confidence                                      12468899999999999999999999999998      88887765544

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.96  E-value=1.7e-30  Score=262.52  Aligned_cols=184  Identities=17%  Similarity=0.291  Sum_probs=154.7

Q ss_pred             CcCCCC-CHHHHHHhhc------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEec
Q 010713            1 MKFYEG-SVGDRMAQLK------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDV   67 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~------------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DF   67 (503)
                      |||++| +|.+++....            ...+++.+++.++.||+.||+|||++||+||||||+||+++.++.+||+||
T Consensus       129 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Df  208 (333)
T 2i1m_A          129 TEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDF  208 (333)
T ss_dssp             EECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCC
T ss_pred             EecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeEEECcc
Confidence            789985 9999997542            356899999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccC
Q 010713           68 GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQE  146 (503)
Q Consensus        68 Gla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~  146 (503)
                      |++....... .........+|+.|+|||++.+.   .++.++|||||||++|+|++ |..||.+.........+.....
T Consensus       209 g~~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~  284 (333)
T 2i1m_A          209 GLARDIMNDS-NYIVKGNARLPVKWMAPESIFDC---VYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGY  284 (333)
T ss_dssp             GGGCCGGGCT-TSEECSSCEECGGGSCHHHHHHC---CCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTC
T ss_pred             cccccccccc-ceeecCCCCCCccccCHHHhccC---CCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCC
Confidence            9997653321 11112344567899999998743   68899999999999999999 9999988776666666666566


Q ss_pred             CCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          147 IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       147 ~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      ....+..+++.+.++|.+||+.||.+|||+.++++.|+.+..
T Consensus       285 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~  326 (333)
T 2i1m_A          285 QMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ  326 (333)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence            666778889999999999999999999999999999987653

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.96  E-value=1.8e-29  Score=253.46  Aligned_cols=181  Identities=23%  Similarity=0.380  Sum_probs=143.8

Q ss_pred             CcCCCC-CHHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCCeecccCCCcEEEccCCc-EEEEecCCccccc
Q 010713            1 MKFYEG-SVGDRMAQLKG-GKLSLSNVFRYAIDLAQGILQLHS---KGILVLNLKPFNFILNEADR-AVLGDVGIPHLLL   74 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~-~~Ls~~~vl~i~~QIl~aL~yLHs---~gIvHrDLKP~NILld~~~~-vKL~DFGla~~~~   74 (503)
                      |||++| +|.+++..... ..++...++.++.|++.||+|||+   +||+||||||+||+++.++. +||+|||++....
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~  157 (307)
T 2eva_A           78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ  157 (307)
T ss_dssp             EECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-----
T ss_pred             EEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccc
Confidence            799985 99999974321 257899999999999999999999   89999999999999998886 7999999987543


Q ss_pred             CCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHhccCCCCCCC
Q 010713           75 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD--EIYDAVVRRQEIPPIPS  152 (503)
Q Consensus        75 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~--e~~~~i~~~~~~~~~~~  152 (503)
                      .      ......||+.|+|||++.+.   .++.++||||||+++|+|++|+.||......  ..... ......+..+.
T Consensus       158 ~------~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~  227 (307)
T 2eva_A          158 T------HMTNNKGSAAWMAPEVFEGS---NYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWA-VHNGTRPPLIK  227 (307)
T ss_dssp             -------------CCTTSSCHHHHTCC---CCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHH-HHTTCCCCCBT
T ss_pred             c------ccccCCCCCceEChhhhCCC---CCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHH-HhcCCCCCccc
Confidence            2      22345689999999999754   6889999999999999999999999864322  22222 23344556678


Q ss_pred             CCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcC
Q 010713          153 GLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVH  191 (503)
Q Consensus       153 ~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~  191 (503)
                      .+++.+.++|.+||+.||.+|||+.++++.|+.+...+.
T Consensus       228 ~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  266 (307)
T 2eva_A          228 NLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP  266 (307)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred             ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence            899999999999999999999999999999999876543

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.96  E-value=6.3e-30  Score=256.11  Aligned_cols=187  Identities=18%  Similarity=0.255  Sum_probs=148.8

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCC-
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL-   78 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~-   78 (503)
                      |||++| +|.+++.. ....+++.+++.++.||+.||+|||++||+||||||+||+++ ++.++|+|||++........ 
T Consensus       108 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~  185 (319)
T 2y4i_B          108 TSLCKGRTLYSVVRD-AKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG  185 (319)
T ss_dssp             CBCCCSEEHHHHTTS-SCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC--------
T ss_pred             eecccCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCcccccccccc
Confidence            799985 99999864 345799999999999999999999999999999999999998 67999999999865432111 


Q ss_pred             -CCCCCCCccCCCCCCCccccCCCC------CCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCC
Q 010713           79 -PSSDLPRRLGTPNYMAPEQWQPEV------RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP  151 (503)
Q Consensus        79 -~~~~~~~~~Gt~~Y~APE~l~~~~------~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~  151 (503)
                       .........|++.|+|||++.+..      ...++.++|||||||++|+|++|..||...........+.........+
T Consensus       186 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  265 (319)
T 2y4i_B          186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQ  265 (319)
T ss_dssp             --CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCCCC
T ss_pred             ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCCCc
Confidence             112233456899999999987421      2357889999999999999999999999988888777766554444444


Q ss_pred             CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          152 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       152 ~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      ..++.++.++|.+||..||.+|||+.++++.|+.+...
T Consensus       266 ~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~  303 (319)
T 2y4i_B          266 IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR  303 (319)
T ss_dssp             SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred             CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999999987654

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.96  E-value=2.7e-30  Score=255.06  Aligned_cols=182  Identities=20%  Similarity=0.375  Sum_probs=155.7

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.......+++..++.++.||+.||+|||++||+|+||||+||+++.++.++|+|||++.......  
T Consensus        88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~--  165 (288)
T 3kfa_A           88 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--  165 (288)
T ss_dssp             EECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS--
T ss_pred             EEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCc--
Confidence            78998 599999987666779999999999999999999999999999999999999999999999999997654321  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........+++.|+|||.+.+.   .++.++||||||+++|+|++ |..||...+..+....+.. ......+..+++.+
T Consensus       166 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l  241 (288)
T 3kfa_A          166 YTAHAGAKFPIKWTAPESLAYN---KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRMERPEGCPEKV  241 (288)
T ss_dssp             SEEETTEEECGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT-TCCCCCCTTCCHHH
T ss_pred             cccccCCccccCcCChhhhccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc-cCCCCCCCCCCHHH
Confidence            1122334567889999999743   68899999999999999999 9999998887777665544 34556678899999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      .+||.+||+.||.+|||+.++++.|+.+..
T Consensus       242 ~~li~~~l~~dp~~Rps~~~~~~~l~~~~~  271 (288)
T 3kfa_A          242 YELMRACWQWNPSDRPSFAEIHQAFETMFQ  271 (288)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCChhhCcCHHHHHHHHHHHHH
Confidence            999999999999999999999999988754

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.96  E-value=1.1e-29  Score=251.90  Aligned_cols=178  Identities=23%  Similarity=0.369  Sum_probs=144.8

Q ss_pred             CcCCCC-CHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEE---ccCCcEEEEecCCccccc
Q 010713            1 MKFYEG-SVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL---NEADRAVLGDVGIPHLLL   74 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~--~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILl---d~~~~vKL~DFGla~~~~   74 (503)
                      |||++| +|.+++...  ....+++..++.++.||+.||+|||++||+||||||+||++   +.++.+||+|||++....
T Consensus        99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~  178 (285)
T 3is5_A           99 METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK  178 (285)
T ss_dssp             ECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred             EEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence            799985 999998653  35789999999999999999999999999999999999999   445789999999997654


Q ss_pred             CCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC-CCCC
Q 010713           75 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-IPSG  153 (503)
Q Consensus        75 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~-~~~~  153 (503)
                      .    ........||+.|+|||++.+    .++.++||||||+++|+|++|..||.+....+............. ....
T Consensus       179 ~----~~~~~~~~~t~~y~aPE~~~~----~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  250 (285)
T 3is5_A          179 S----DEHSTNAAGTALYMAPEVFKR----DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP  250 (285)
T ss_dssp             ------------CTTGGGCCHHHHTT----CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CC
T ss_pred             C----cccCcCcccccCcCChHHhcc----CCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCc
Confidence            3    222345678999999999863    578999999999999999999999999888877766655433222 2245


Q ss_pred             CcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          154 LPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       154 ~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      +++.+.+||.+||+.||++|||+.|+++      ++|+.
T Consensus       251 ~~~~~~~li~~~L~~dP~~Rps~~e~l~------hp~f~  283 (285)
T 3is5_A          251 LTPQAVDLLKQMLTKDPERRPSAAQVLH------HEWFK  283 (285)
T ss_dssp             CCHHHHHHHHHHTCSCTTTSCCHHHHHT------SGGGG
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHhc------CHHhh
Confidence            7899999999999999999999999998      77764

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.96  E-value=2.5e-30  Score=267.02  Aligned_cols=184  Identities=18%  Similarity=0.307  Sum_probs=154.8

Q ss_pred             CcCCCC-CHHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC---cEEEEecCCcc
Q 010713            1 MKFYEG-SVGDRMAQLKG-----GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD---RAVLGDVGIPH   71 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~-----~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~---~vKL~DFGla~   71 (503)
                      ||||+| +|.+++.....     ..+++.+++.++.||+.||+|||++||+||||||+|||++.++   .+||+|||+++
T Consensus       153 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~  232 (367)
T 3l9p_A          153 LELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR  232 (367)
T ss_dssp             EECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHH
T ss_pred             EEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCcccc
Confidence            799975 99999986432     4699999999999999999999999999999999999999555   59999999997


Q ss_pred             cccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCC
Q 010713           72 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI  150 (503)
Q Consensus        72 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~  150 (503)
                      ...... .........+|+.|+|||++.+.   .++.++|||||||++|+|++ |..||......+....+... .....
T Consensus       233 ~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~-~~~~~  307 (367)
T 3l9p_A          233 DIYRAG-YYRKGGCAMLPVKWMPPEAFMEG---IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG-GRMDP  307 (367)
T ss_dssp             HHHHHS-SCTTCCGGGSCGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT-CCCCC
T ss_pred             cccccc-ccccCCCcCCcccEECHHHhcCC---CCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCCCC
Confidence            542211 11223355688999999998743   68899999999999999998 99999999888887776553 34556


Q ss_pred             CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          151 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       151 ~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      +..++..+.+||.+||+.||.+|||+.++++.|+.+...
T Consensus       308 ~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~  346 (367)
T 3l9p_A          308 PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD  346 (367)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence            788999999999999999999999999999999887653

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.96  E-value=3.7e-30  Score=266.47  Aligned_cols=179  Identities=21%  Similarity=0.311  Sum_probs=148.1

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH--HCCCeecccCCCcEEEc--cCCcEEEEecCCcccccCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLH--SKGILVLNLKPFNFILN--EADRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLH--s~gIvHrDLKP~NILld--~~~~vKL~DFGla~~~~~~   76 (503)
                      |||++|+|.+++.......+++..+..++.||+.||+|||  +.||+||||||+|||++  .++.+||+|||++..... 
T Consensus       135 ~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~-  213 (382)
T 2vx3_A          135 FEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-  213 (382)
T ss_dssp             EECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTC-
T ss_pred             EecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceeccc-
Confidence            7999999999998755567999999999999999999999  57999999999999995  467899999999977532 


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC-------
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-------  149 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~-------  149 (503)
                           ......||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.+..+....+......++       
T Consensus       214 -----~~~~~~~t~~y~aPE~~~~~---~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  285 (382)
T 2vx3_A          214 -----RIYQYIQSRFYRSPEVLLGM---PYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQA  285 (382)
T ss_dssp             -----CCCSSCSCGGGCCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTC
T ss_pred             -----ccccccCCccccChHHHcCC---CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence                 23456889999999999854   688999999999999999999999999888777766654322111       


Q ss_pred             ---------CCC---------------------C-------------------------CcHHHHHHHHHhhhcCCCCCC
Q 010713          150 ---------IPS---------------------G-------------------------LPPAVENVLLGCFEYDLRSRP  174 (503)
Q Consensus       150 ---------~~~---------------------~-------------------------~s~~l~~LI~~cL~~DP~~RP  174 (503)
                               ++.                     .                         .++.+.+||.+||+.||++||
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rp  365 (382)
T 2vx3_A          286 PKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRI  365 (382)
T ss_dssp             TTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSC
T ss_pred             HHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCC
Confidence                     000                     0                         014789999999999999999


Q ss_pred             CHHHHHHHHHhhccCcCCCC
Q 010713          175 LMTDILRVFKSSQNSVHSDG  194 (503)
Q Consensus       175 S~~elL~~L~~i~~~~~~~~  194 (503)
                      |+.|+++      |+|+...
T Consensus       366 ta~e~L~------hp~f~~~  379 (382)
T 2vx3_A          366 QPYYALQ------HSFFKKT  379 (382)
T ss_dssp             CHHHHTT------SGGGCC-
T ss_pred             CHHHHhc------CcccccC
Confidence            9999998      8888654

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.96  E-value=3e-30  Score=259.28  Aligned_cols=185  Identities=17%  Similarity=0.240  Sum_probs=132.2

Q ss_pred             CcCCCCCHHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecccCCCcEEEccCCcEEEEecCCcccccCCC
Q 010713            1 MKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKG--ILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~GSL~d~L~~~-~~~~Ls~~~vl~i~~QIl~aL~yLHs~g--IvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~   77 (503)
                      |||++|+|.+++... ..+.+++.+++.++.||+.||+|||++|  |+||||||+|||++.++.+||+|||++.......
T Consensus       113 ~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~  192 (337)
T 3ll6_A          113 TELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYP  192 (337)
T ss_dssp             EECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC
T ss_pred             EEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccceeccccC
Confidence            689999999999754 3567999999999999999999999999  9999999999999999999999999997754321


Q ss_pred             CCC---------CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC
Q 010713           78 LPS---------SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP  148 (503)
Q Consensus        78 ~~~---------~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~  148 (503)
                      ...         .......+|+.|+|||++.......++.++|||||||++|+|++|..||..........    .....
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~----~~~~~  268 (337)
T 3ll6_A          193 DYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVN----GKYSI  268 (337)
T ss_dssp             -------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------------CCC
T ss_pred             cccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhc----CcccC
Confidence            110         11124568999999999853334468899999999999999999999997655443322    22333


Q ss_pred             CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          149 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       149 ~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      +.+...+..+.+||.+||+.||.+||++.++++.|+.+...
T Consensus       269 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~  309 (337)
T 3ll6_A          269 PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA  309 (337)
T ss_dssp             CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            44567788899999999999999999999999999988653

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.96  E-value=2.8e-30  Score=265.76  Aligned_cols=177  Identities=18%  Similarity=0.207  Sum_probs=142.7

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecccCCCcEEEccCC-------------------
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEAD-------------------   60 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~-gIvHrDLKP~NILld~~~-------------------   60 (503)
                      |||++|+|.+.+.......+++.+++.++.||+.||+|||++ ||+||||||+|||++.++                   
T Consensus       124 ~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~  203 (397)
T 1wak_A          124 FEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAP  203 (397)
T ss_dssp             ECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC--------
T ss_pred             EeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCC
Confidence            799999999998865557899999999999999999999999 999999999999998775                   


Q ss_pred             ------------------------------cEEEEecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCcc
Q 010713           61 ------------------------------RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFET  110 (503)
Q Consensus        61 ------------------------------~vKL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ks  110 (503)
                                                    .+||+|||++.....      ......||+.|+|||++.+.   .++.++
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~------~~~~~~gt~~y~aPE~~~~~---~~~~~~  274 (397)
T 1wak_A          204 PPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK------HFTEDIQTRQYRSLEVLIGS---GYNTPA  274 (397)
T ss_dssp             -------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTB------CSCSCCSCGGGCCHHHHHTS---CCCTHH
T ss_pred             CCCCCccccCCcccccccccccccccccccceEeccccccccccc------cCccCCCCCcccCChhhcCC---CCCcHH
Confidence                                          799999999976532      23456789999999999854   588999


Q ss_pred             chHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHHhccCCC------------------------------------
Q 010713          111 DSWGFACSIIEMLTGVQPRCGRSV------DEIYDAVVRRQEIP------------------------------------  148 (503)
Q Consensus       111 DIwSLGviLyeLltG~~Pf~~~~~------~e~~~~i~~~~~~~------------------------------------  148 (503)
                      |||||||++|+|++|..||...+.      ......+......+                                    
T Consensus       275 DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (397)
T 1wak_A          275 DIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVL  354 (397)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHH
T ss_pred             HHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhh
Confidence            999999999999999999976442      22222222111110                                    


Q ss_pred             ----CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          149 ----PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       149 ----~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                          ..+...++.+.+||.+||+.||++|||+.|+++      |+|+.
T Consensus       355 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~------hp~~~  396 (397)
T 1wak_A          355 VEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR------HPWLN  396 (397)
T ss_dssp             HHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT------SGGGG
T ss_pred             hhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh------Ccccc
Confidence                112234567899999999999999999999998      77764

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.96  E-value=8.9e-30  Score=250.15  Aligned_cols=177  Identities=21%  Similarity=0.318  Sum_probs=148.0

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.......+++..++.++.||+.||+|||++||+|+||||+||+++.++.++|+|||++......   
T Consensus        99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---  175 (284)
T 2a19_B           99 MEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND---  175 (284)
T ss_dssp             ECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEESSCC---
T ss_pred             EeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchhheecccc---
Confidence            799995 9999998766678999999999999999999999999999999999999999999999999998776432   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                       .......+++.|+|||++.+.   .++.++||||||+++|+|++|..|+...  ......+.    ...++..++..+.
T Consensus       176 -~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~~  245 (284)
T 2a19_B          176 -GKRTRSKGTLRYMSPEQISSQ---DYGKEVDLYALGLILAELLHVCDTAFET--SKFFTDLR----DGIISDIFDKKEK  245 (284)
T ss_dssp             -SCCCCCCSCCTTSCHHHHHCS---CCCTHHHHHHHHHHHHHHHSCCSSHHHH--HHHHHHHH----TTCCCTTSCHHHH
T ss_pred             -ccccccCCcccccChhhhccC---CCcchhhhHHHHHHHHHHHhcCCcchhH--HHHHHHhh----cccccccCCHHHH
Confidence             223345789999999999754   6789999999999999999999887431  22222222    2235677899999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHHHHHhhccCc
Q 010713          160 NVLLGCFEYDLRSRPLMTDILRVFKSSQNSV  190 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~  190 (503)
                      ++|.+||+.||.+|||+.++++.|+.+....
T Consensus       246 ~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~  276 (284)
T 2a19_B          246 TLLQKLLSKKPEDRPNTSEILRTLTVWKKSP  276 (284)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHTC--
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHhhCC
Confidence            9999999999999999999999999876543

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.96  E-value=3.8e-30  Score=266.81  Aligned_cols=179  Identities=22%  Similarity=0.336  Sum_probs=151.5

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEE--ccCCcEEEEecCCcccccCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL--NEADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILl--d~~~~vKL~DFGla~~~~~~~   77 (503)
                      |||++| +|.+++.. ....+++.+++.++.||+.||+|||++||+||||||+|||+  +.++.+||+|||++.....  
T Consensus       165 ~E~~~~~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~--  241 (373)
T 2x4f_A          165 MEYVDGGELFDRIID-ESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP--  241 (373)
T ss_dssp             EECCTTCEEHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCT--
T ss_pred             EeCCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCC--
Confidence            799984 99998864 44569999999999999999999999999999999999999  5567899999999987643  


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC--CCCCCc
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--IPSGLP  155 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~--~~~~~s  155 (503)
                        ........||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.+..+....+........  ....++
T Consensus       242 --~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  316 (373)
T 2x4f_A          242 --REKLKVNFGTPEFLAPEVVNYD---FVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDIS  316 (373)
T ss_dssp             --TCBCCCCCSSCTTCCHHHHTTC---BCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSC
T ss_pred             --ccccccccCCCcEeChhhccCC---CCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCC
Confidence              2223455799999999999743   688999999999999999999999999988888887776543322  225789


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          156 PAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      +++.+||.+||+.||.+|||+.|+++      ++|+.+
T Consensus       317 ~~~~~li~~~L~~dp~~Rps~~e~l~------hp~~~~  348 (373)
T 2x4f_A          317 EEAKEFISKLLIKEKSWRISASEALK------HPWLSD  348 (373)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHH------SHHHHC
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHhc------CcCcCC
Confidence            99999999999999999999999998      666544

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.96  E-value=1.2e-30  Score=263.85  Aligned_cols=184  Identities=19%  Similarity=0.280  Sum_probs=145.2

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC----------CCeecccCCCcEEEccCCcEEEEecCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK----------GILVLNLKPFNFILNEADRAVLGDVGI   69 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~----------gIvHrDLKP~NILld~~~~vKL~DFGl   69 (503)
                      ||||+| +|.+++..   ..+++.+++.++.||+.||+|||++          ||+||||||+|||++.++.+||+|||+
T Consensus       101 ~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~  177 (322)
T 3soc_A          101 TAFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL  177 (322)
T ss_dssp             EECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             EecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCc
Confidence            799985 99999964   4599999999999999999999999          999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCccCCCCCCCccccCCCCC--CCCCCccchHHHHHHHHHHHhCCCCCCCCC--------------
Q 010713           70 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVR--GPISFETDSWGFACSIIEMLTGVQPRCGRS--------------  133 (503)
Q Consensus        70 a~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~--~~~s~ksDIwSLGviLyeLltG~~Pf~~~~--------------  133 (503)
                      +........ ........||+.|+|||++.+...  ..++.++|||||||++|+|++|..||.+..              
T Consensus       178 a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~  256 (322)
T 3soc_A          178 ALKFEAGKS-AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQH  256 (322)
T ss_dssp             CEEECTTSC-CCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSS
T ss_pred             ccccccccC-ccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccC
Confidence            977644221 222344679999999999975311  235568899999999999999999997532              


Q ss_pred             --hHHHHHHHHhccCCCCCCC-----CCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          134 --VDEIYDAVVRRQEIPPIPS-----GLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       134 --~~e~~~~i~~~~~~~~~~~-----~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                        ..+....+......+..+.     ..++.+.+||.+||+.||++|||+.++++.|+.+..
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~  318 (322)
T 3soc_A          257 PSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR  318 (322)
T ss_dssp             CCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence              2233333333333333332     234569999999999999999999999999998754

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.96  E-value=7.6e-30  Score=263.24  Aligned_cols=180  Identities=21%  Similarity=0.278  Sum_probs=152.2

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++..  ...+++..+..++.||+.||+|||++||+|+||||+||+++.++.++|+|||++.....    
T Consensus       179 ~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~----  252 (365)
T 2y7j_A          179 FDLMRKGELFDYLTE--KVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEP----  252 (365)
T ss_dssp             ECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT----
T ss_pred             EEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccCC----
Confidence            799986 99999974  45799999999999999999999999999999999999999999999999999877643    


Q ss_pred             CCCCCCccCCCCCCCccccCCC---CCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCC--CCC
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGL  154 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~---~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~--~~~  154 (503)
                      ........||+.|+|||++.+.   ....++.++|||||||++|+|++|..||...........+.........+  ..+
T Consensus       253 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  332 (365)
T 2y7j_A          253 GEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDR  332 (365)
T ss_dssp             TCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHHSSS
T ss_pred             CcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCcccccC
Confidence            2233456899999999998532   12357889999999999999999999999888877777766544333222  568


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      +..+.+||.+||+.||++|||+.++++      ++|+.
T Consensus       333 ~~~~~~li~~~L~~dP~~Rps~~ell~------hp~f~  364 (365)
T 2y7j_A          333 SSTVKDLISRLLQVDPEARLTAEQALQ------HPFFE  364 (365)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHH------SGGGC
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHhc------CcccC
Confidence            899999999999999999999999998      77764

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.96  E-value=7.5e-30  Score=261.74  Aligned_cols=174  Identities=20%  Similarity=0.333  Sum_probs=143.4

Q ss_pred             CcCCC-CCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCc---EEEEecCCccccc
Q 010713            1 MKFYE-GSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR---AVLGDVGIPHLLL   74 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~--~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~---vKL~DFGla~~~~   74 (503)
                      ||||+ |+|.+.+...  ....+++..+..++.||+.||+|||++||+||||||+|||++.++.   +||+|||++....
T Consensus       105 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~  184 (351)
T 3c0i_A          105 FEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG  184 (351)
T ss_dssp             EECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECC
T ss_pred             EeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEec
Confidence            79998 5998888654  2446899999999999999999999999999999999999987654   9999999997764


Q ss_pred             CCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC--CCC
Q 010713           75 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--IPS  152 (503)
Q Consensus        75 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~--~~~  152 (503)
                      ..   ........||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.. .+....+........  ...
T Consensus       185 ~~---~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~i~~~~~~~~~~~~~  257 (351)
T 3c0i_A          185 ES---GLVAGGRVGTPHFMAPEVVKRE---PYGKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWS  257 (351)
T ss_dssp             TT---SCBCCCCCSCGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCSSCSSH-HHHHHHHHHTCCCCCHHHHT
T ss_pred             CC---CeeecCCcCCcCccCHHHHcCC---CCCchHhhHHHHHHHHHHHHCCCCCCCcH-HHHHHHHHcCCCCCCccccc
Confidence            32   1223456799999999999754   68899999999999999999999998753 455555554332221  125


Q ss_pred             CCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          153 GLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       153 ~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      .+++++.+||.+||+.||++|||+.++++
T Consensus       258 ~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          258 HISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             TSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            78999999999999999999999999998

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.96  E-value=5.7e-30  Score=253.64  Aligned_cols=176  Identities=20%  Similarity=0.352  Sum_probs=146.8

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecccCCCcEEEc-cCCcEEEEecCCcccccCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG--ILVLNLKPFNFILN-EADRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~g--IvHrDLKP~NILld-~~~~vKL~DFGla~~~~~~   76 (503)
                      |||++| +|.+++..  ...+++..++.++.||+.||+|||+++  |+|+||||+||+++ .++.+||+|||++..... 
T Consensus       108 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~-  184 (290)
T 1t4h_A          108 TELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA-  184 (290)
T ss_dssp             EECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT-
T ss_pred             EEecCCCCHHHHHHH--ccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccc-
Confidence            789975 99999974  467999999999999999999999999  99999999999997 788999999999865432 


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHhccCCCCCCCCCc
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV-DEIYDAVVRRQEIPPIPSGLP  155 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-~e~~~~i~~~~~~~~~~~~~s  155 (503)
                          .......||+.|+|||++.+    .++.++|||||||++|+|++|..||..... ......+.........+...+
T Consensus       185 ----~~~~~~~~t~~y~aPE~~~~----~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (290)
T 1t4h_A          185 ----SFAKAVIGTPEFMAPEMYEE----KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAI  256 (290)
T ss_dssp             ----TSBEESCSSCCCCCGGGGGT----CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCC
T ss_pred             ----cccccccCCcCcCCHHHHhc----cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCC
Confidence                22234578999999998863    488999999999999999999999987544 444444444334444567788


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          156 PAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      +.+.+||.+||+.||.+|||+.++++      ++|+.+
T Consensus       257 ~~l~~li~~~l~~dp~~Rps~~ell~------h~~f~~  288 (290)
T 1t4h_A          257 PEVKEIIEGCIRQNKDERYSIKDLLN------HAFFQE  288 (290)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHT------SGGGC-
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHhh------Cccccc
Confidence            99999999999999999999999998      887764

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.96  E-value=2.1e-30  Score=268.43  Aligned_cols=182  Identities=22%  Similarity=0.312  Sum_probs=153.0

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.. ....+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++........ 
T Consensus       191 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~-  268 (377)
T 3cbl_A          191 MELVQGGDFLTFLRT-EGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY-  268 (377)
T ss_dssp             EECCTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE-
T ss_pred             EEcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCce-
Confidence            79998 699999975 345699999999999999999999999999999999999999999999999999876432110 


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........+++.|+|||++...   .++.++|||||||++|||++ |..||.+....+....+.. ....+.+..+++.+
T Consensus       269 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l  344 (377)
T 3cbl_A          269 AASGGLRQVPVKWTAPEALNYG---RYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEK-GGRLPCPELCPDAV  344 (377)
T ss_dssp             ECCSSCCEEEGGGSCHHHHHHC---EEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHT-TCCCCCCTTCCHHH
T ss_pred             eecCCCCCCCcCcCCHhHhccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCCCCCCCCCCHHH
Confidence            1111123356789999999743   68899999999999999998 9999999888777665544 44566788899999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      .+||.+||+.||++|||+.++++.|+.+..
T Consensus       345 ~~li~~cl~~dP~~Rps~~~i~~~L~~i~~  374 (377)
T 3cbl_A          345 FRLMEQCWAYEPGQRPSFSTIYQELQSIRK  374 (377)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence            999999999999999999999999998754

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.96  E-value=2e-30  Score=261.96  Aligned_cols=190  Identities=19%  Similarity=0.292  Sum_probs=145.2

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---------CCeecccCCCcEEEccCCcEEEEecCCc
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK---------GILVLNLKPFNFILNEADRAVLGDVGIP   70 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~---------gIvHrDLKP~NILld~~~~vKL~DFGla   70 (503)
                      ||||+ |+|.+++..   ..+++..++.++.||+.||+|||++         ||+||||||+|||++.++.+||+|||++
T Consensus        91 ~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a  167 (336)
T 3g2f_A           91 MEYYPNGSLXKYLSL---HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS  167 (336)
T ss_dssp             ECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTC
T ss_pred             EecCCCCcHHHHHhh---cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccce
Confidence            79997 599999953   4458999999999999999999999         9999999999999999999999999999


Q ss_pred             ccccCCCC-----CCCCCCCccCCCCCCCccccCCCCC----CCCCCccchHHHHHHHHHHHhCCCCCCCC-C-------
Q 010713           71 HLLLGIPL-----PSSDLPRRLGTPNYMAPEQWQPEVR----GPISFETDSWGFACSIIEMLTGVQPRCGR-S-------  133 (503)
Q Consensus        71 ~~~~~~~~-----~~~~~~~~~Gt~~Y~APE~l~~~~~----~~~s~ksDIwSLGviLyeLltG~~Pf~~~-~-------  133 (503)
                      ........     .........||+.|+|||++.+...    ..++.++|||||||++|+|++|..||... .       
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~  247 (336)
T 3g2f_A          168 MRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMA  247 (336)
T ss_dssp             EECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCT
T ss_pred             eecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHh
Confidence            77643211     1122235579999999999975211    23567899999999999999997665321 1       


Q ss_pred             ----------hHHHHHHHHhccCCCCCCCC------CcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          134 ----------VDEIYDAVVRRQEIPPIPSG------LPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       134 ----------~~e~~~~i~~~~~~~~~~~~------~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                                ..+....+......+.++..      +++.+.+||.+||+.||++|||+.|+++.|+.+.+.+..+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~  323 (336)
T 3g2f_A          248 FQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERN  323 (336)
T ss_dssp             THHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC-
T ss_pred             hhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhc
Confidence                      11222222223333444433      3458999999999999999999999999999999888654

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.96  E-value=5.8e-30  Score=273.20  Aligned_cols=175  Identities=21%  Similarity=0.252  Sum_probs=142.6

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++|+|.+.+.    ..+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....    .
T Consensus       146 ~E~~~~~l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~----~  217 (464)
T 3ttj_A          146 MELMDANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----S  217 (464)
T ss_dssp             EECCSEEHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC---------C
T ss_pred             EeCCCCCHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCC----C
Confidence            7999999888874    3499999999999999999999999999999999999999999999999999976543    2


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC-----------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-----------  149 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~-----------  149 (503)
                      ......+||+.|+|||++.+.   .++.++|||||||++|+|++|+.||.+.+..+.+..+......+.           
T Consensus       218 ~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~  294 (464)
T 3ttj_A          218 FMMTPYVVTRYYRAPEVILGM---GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV  294 (464)
T ss_dssp             CCC----CCCTTCCHHHHTTC---CCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHH
T ss_pred             cccCCCcccccccCHHHHcCC---CCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhh
Confidence            234567899999999999854   688999999999999999999999999888877777655322210           


Q ss_pred             ---------C---------CCC-----------CcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          150 ---------I---------PSG-----------LPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       150 ---------~---------~~~-----------~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                               .         +..           .++++.+||.+||..||++|||+.|+++      |+|+.
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~------Hp~~~  360 (464)
T 3ttj_A          295 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ------HPYIN  360 (464)
T ss_dssp             HHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT------STTTG
T ss_pred             hhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc------Chhhh
Confidence                     0         000           1567999999999999999999999998      88876

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.96  E-value=5.6e-30  Score=267.39  Aligned_cols=181  Identities=24%  Similarity=0.355  Sum_probs=152.7

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEcc--CCcEEEEecCCcccccCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE--ADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~--~~~vKL~DFGla~~~~~~~   77 (503)
                      ||||+| +|.+++.. ....+++.+++.++.||+.||+|||++||+||||||+|||++.  ++.+||+|||++.....  
T Consensus       127 ~E~~~gg~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~--  203 (387)
T 1kob_A          127 LEFLSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP--  203 (387)
T ss_dssp             EECCCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT--
T ss_pred             EEcCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCC--
Confidence            799985 99998863 3457999999999999999999999999999999999999974  46799999999987643  


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC--CCCCCCCc
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI--PPIPSGLP  155 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~--~~~~~~~s  155 (503)
                        ........||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.+..+....+......  ......++
T Consensus       204 --~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s  278 (387)
T 1kob_A          204 --DEIVKVTTATAEFAAPEIVDRE---PVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVS  278 (387)
T ss_dssp             --TSCEEEECSSGGGCCHHHHTTC---CBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSC
T ss_pred             --CcceeeeccCCCccCchhccCC---CCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCC
Confidence              1222345799999999999754   6889999999999999999999999998888877777654332  22346789


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCC
Q 010713          156 PAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGG  195 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~  195 (503)
                      +++.+||.+||+.||.+|||+.++++      ++|+....
T Consensus       279 ~~~~~li~~~L~~dP~~Rpt~~ell~------hp~~~~~~  312 (387)
T 1kob_A          279 PEAKDFIKNLLQKEPRKRLTVHDALE------HPWLKGDH  312 (387)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHT------STTTSSCC
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHhh------CccccCCc
Confidence            99999999999999999999999998      88876543

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.96  E-value=5.4e-30  Score=251.86  Aligned_cols=171  Identities=19%  Similarity=0.274  Sum_probs=146.7

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEE---ccCCcEEEEecCCcccccCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL---NEADRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILl---d~~~~vKL~DFGla~~~~~~   76 (503)
                      |||++| +|.+++..  ...+++.+++.++.|++.||+|||++||+||||||+||++   +.++.++|+|||++..... 
T Consensus        85 ~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~-  161 (277)
T 3f3z_A           85 MELCTGGELFERVVH--KRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP-  161 (277)
T ss_dssp             EECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT-
T ss_pred             EeccCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccC-
Confidence            789985 99998874  4669999999999999999999999999999999999999   7788999999999976543 


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCC--CCC
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGL  154 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~--~~~  154 (503)
                         ........+|+.|+|||++.+    .++.++||||||+++|+|++|..||......+....+.......+..  ..+
T Consensus       162 ---~~~~~~~~~t~~y~aPE~~~~----~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (277)
T 3f3z_A          162 ---GKMMRTKVGTPYYVSPQVLEG----LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNV  234 (277)
T ss_dssp             ---TSCBCCCCSCTTTCCHHHHTT----CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTS
T ss_pred             ---ccchhccCCCCCccChHHhcc----cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcC
Confidence               223345679999999999864    37889999999999999999999999988888877776643322211  368


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ++.+.+||.+||+.||.+|||+.++++
T Consensus       235 ~~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          235 SPQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            999999999999999999999999987

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.96  E-value=6.8e-30  Score=255.85  Aligned_cols=185  Identities=17%  Similarity=0.289  Sum_probs=150.0

Q ss_pred             CcCCCC-CHHHHHHhh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccC
Q 010713            1 MKFYEG-SVGDRMAQL----KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG   75 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~----~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~   75 (503)
                      |||++| +|.+++...    ....+++.+++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++.....
T Consensus       120 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~  199 (313)
T 3brb_A          120 LPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYS  199 (313)
T ss_dssp             EECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC-----
T ss_pred             EecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecCcceeccc
Confidence            688984 999998542    346799999999999999999999999999999999999999999999999999876543


Q ss_pred             CCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCC
Q 010713           76 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGL  154 (503)
Q Consensus        76 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~  154 (503)
                      ... ........+++.|+|||.+.+.   .++.++||||||+++|+|++ |..||.+....+....+... ..+..+..+
T Consensus       200 ~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~  274 (313)
T 3brb_A          200 GDY-YRQGRIAKMPVKWIAIESLADR---VYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHG-HRLKQPEDC  274 (313)
T ss_dssp             ------------CCGGGSCHHHHHSS---CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT-CCCCCBTTC
T ss_pred             ccc-cCcccccCCCccccCchhhcCC---CccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcC-CCCCCCccc
Confidence            211 1122344578899999999743   68899999999999999999 99999988887777766543 355667889


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCc
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSV  190 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~  190 (503)
                      ++.+.++|.+||+.||.+|||+.++++.|+.+....
T Consensus       275 ~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l  310 (313)
T 3brb_A          275 LDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL  310 (313)
T ss_dssp             CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             cHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999886543

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.96  E-value=1.5e-30  Score=262.75  Aligned_cols=186  Identities=18%  Similarity=0.286  Sum_probs=150.4

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++... ...+++.+++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++.........
T Consensus       105 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~  183 (327)
T 3lxl_A          105 MEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY  183 (327)
T ss_dssp             EECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSE
T ss_pred             EeecCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceecccCCcc
Confidence            78996 5999999753 456999999999999999999999999999999999999999999999999999876432222


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChH--------------HHHHHHHhcc
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD--------------EIYDAVVRRQ  145 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~--------------e~~~~i~~~~  145 (503)
                      ........+|+.|+|||++.+.   .++.++|||||||++|+|++|..||......              ..........
T Consensus       184 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (327)
T 3lxl_A          184 YVVREPGQSPIFWYAPESLSDN---IFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEG  260 (327)
T ss_dssp             EECSSCCCSCGGGSCHHHHHHC---EEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTT
T ss_pred             ceeeccCCccccccCHHHhccC---CCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcc
Confidence            2223345688889999998744   5788999999999999999999998653321              2222333444


Q ss_pred             CCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCc
Q 010713          146 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSV  190 (503)
Q Consensus       146 ~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~  190 (503)
                      ...+.+..+++.+.+||.+||+.||.+|||+.++++.|+.+....
T Consensus       261 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~  305 (327)
T 3lxl_A          261 QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS  305 (327)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred             cCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence            556677889999999999999999999999999999999875433

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.96  E-value=5.8e-30  Score=267.08  Aligned_cols=190  Identities=20%  Similarity=0.220  Sum_probs=140.6

Q ss_pred             CcCCCCCHHHHHHhhc-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEE----ccCCcEEEEecCC
Q 010713            1 MKFYEGSVGDRMAQLK-------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL----NEADRAVLGDVGI   69 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~-------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILl----d~~~~vKL~DFGl   69 (503)
                      |||++|+|.+++....       ...+++.+++.++.||+.||+|||++||+||||||+|||+    +.++.+||+|||+
T Consensus        99 ~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~  178 (405)
T 3rgf_A           99 FDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF  178 (405)
T ss_dssp             EECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTC
T ss_pred             EeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCC
Confidence            7899999999987432       2259999999999999999999999999999999999999    6778999999999


Q ss_pred             cccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChH---------HHHHH
Q 010713           70 PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD---------EIYDA  140 (503)
Q Consensus        70 a~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~---------e~~~~  140 (503)
                      +.................||+.|+|||++.+.  ..++.++|||||||++|+|++|..||.+....         +....
T Consensus       179 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~  256 (405)
T 3rgf_A          179 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGA--RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR  256 (405)
T ss_dssp             CC----------------CCCTTCCHHHHTTC--CSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHH
T ss_pred             ceecCCCCcccccCCCceecCcccCchhhcCC--CcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHH
Confidence            98764322222334456899999999999753  25889999999999999999999999765432         33333


Q ss_pred             HHhccCCCCC------------------------------------CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 010713          141 VVRRQEIPPI------------------------------------PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK  184 (503)
Q Consensus       141 i~~~~~~~~~------------------------------------~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~  184 (503)
                      +......+..                                    ....++.+.+||.+||+.||.+|||+.|+++   
T Consensus       257 i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~---  333 (405)
T 3rgf_A          257 IFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ---  333 (405)
T ss_dssp             HHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT---
T ss_pred             HHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc---
Confidence            3322211110                                    1123678999999999999999999999998   


Q ss_pred             hhccCcCCCCCCCC
Q 010713          185 SSQNSVHSDGGWTG  198 (503)
Q Consensus       185 ~i~~~~~~~~~w~~  198 (503)
                         |+|+....+..
T Consensus       334 ---hp~f~~~~~~~  344 (405)
T 3rgf_A          334 ---DPYFLEDPLPT  344 (405)
T ss_dssp             ---SGGGTSSSCCC
T ss_pred             ---ChhhccCCCCc
Confidence               99998765543

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.96  E-value=5.3e-30  Score=258.80  Aligned_cols=182  Identities=19%  Similarity=0.288  Sum_probs=152.4

Q ss_pred             CcCCCC-CHHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEE
Q 010713            1 MKFYEG-SVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG   65 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~--------------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~   65 (503)
                      |||++| +|.+++....              ...+++.+++.++.||+.||+|||++||+||||||+||+++.++.+||+
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~  184 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA  184 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEEC
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEc
Confidence            799975 9999997432              2479999999999999999999999999999999999999999999999


Q ss_pred             ecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc
Q 010713           66 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR  144 (503)
Q Consensus        66 DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~  144 (503)
                      |||++.....    ........+++.|+|||++.+.   .++.++|||||||++|+|++ |..||.+....+....+...
T Consensus       185 Dfg~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~  257 (327)
T 1fvr_A          185 DFGLSRGQEV----YVKKTMGRLPVRWMAIESLNYS---VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG  257 (327)
T ss_dssp             CTTCEESSCE----ECCC----CCTTTCCHHHHHHC---EECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGT
T ss_pred             ccCcCccccc----cccccCCCCCccccChhhhccc---cCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcC
Confidence            9999864322    1122344568899999998743   57899999999999999998 99999998888777666443


Q ss_pred             cCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCc
Q 010713          145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSV  190 (503)
Q Consensus       145 ~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~  190 (503)
                       .....+..+++.+.+||.+||+.||.+|||+.++++.|+.+....
T Consensus       258 -~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  302 (327)
T 1fvr_A          258 -YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER  302 (327)
T ss_dssp             -CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             -CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence             345567789999999999999999999999999999999887643

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.96  E-value=3.7e-30  Score=253.13  Aligned_cols=178  Identities=21%  Similarity=0.330  Sum_probs=127.7

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.. ....+++.+++.++.||+.||+|||++||+|+||||+||+++.++.++|+|||++......   
T Consensus        90 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~---  165 (278)
T 3cok_A           90 LEMCHNGEMNRYLKN-RVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP---  165 (278)
T ss_dssp             EECCTTEEHHHHHHT-CSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-----
T ss_pred             EecCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCC---
Confidence            789975 99999874 3467999999999999999999999999999999999999999999999999998765421   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........||+.|+|||.+.+.   .++.++|+||||+++|+|++|..||......+....+..  .....+..++.++.
T Consensus       166 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  240 (278)
T 3cok_A          166 HEKHYTLCGTPNYISPEIATRS---AHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVL--ADYEMPSFLSIEAK  240 (278)
T ss_dssp             -----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCS--SCCCCCTTSCHHHH
T ss_pred             CCcceeccCCCCcCCcchhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhh--cccCCccccCHHHH
Confidence            1222345789999999998744   578899999999999999999999987765555443322  23345677899999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          160 NVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      ++|.+||+.||++|||+.++++      ++|+..
T Consensus       241 ~li~~~l~~dp~~Rps~~~~l~------h~~~~~  268 (278)
T 3cok_A          241 DLIHQLLRRNPADRLSLSSVLD------HPFMSR  268 (278)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHTT------STTTC-
T ss_pred             HHHHHHcccCHhhCCCHHHHhc------CccccC
Confidence            9999999999999999999998      777654

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.96  E-value=6.2e-30  Score=252.62  Aligned_cols=169  Identities=17%  Similarity=0.254  Sum_probs=148.1

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++..  .+.+++.+++.++.||+.||+|||++||+|+||||+||+++.++.++|+|||++.....    
T Consensus        93 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~----  166 (284)
T 2vgo_A           93 LEFAPRGELYKELQK--HGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----  166 (284)
T ss_dssp             ECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSS----
T ss_pred             EEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCcc----
Confidence            799985 99999974  45799999999999999999999999999999999999999999999999999866532    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                       .......|++.|+|||++.+.   .++.++|+||||+++|+|++|..||......+....+..  ....++..++..+.
T Consensus       167 -~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  240 (284)
T 2vgo_A          167 -LRRRTMCGTLDYLPPEMIEGK---THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN--VDLKFPPFLSDGSK  240 (284)
T ss_dssp             -SCBCCCCSCGGGCCHHHHTTC---CBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT--TCCCCCTTSCHHHH
T ss_pred             -cccccccCCCCcCCHHHhccC---CCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhc--cccCCCCcCCHHHH
Confidence             122355789999999999854   578899999999999999999999998888777766654  33456778999999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 010713          160 NVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ++|.+||+.||.+||++.++++
T Consensus       241 ~li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          241 DLISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHhhcCHhhCCCHHHHhh
Confidence            9999999999999999999998

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=4.9e-30  Score=266.16  Aligned_cols=187  Identities=16%  Similarity=0.281  Sum_probs=146.7

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.. ....+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++........
T Consensus       170 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~  248 (373)
T 3c1x_A          170 LPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD  248 (373)
T ss_dssp             EECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred             EECCCCCCHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeeccccccccccccc
Confidence            789985 99999964 4567899999999999999999999999999999999999999999999999999765332211


Q ss_pred             -CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHH
Q 010713           80 -SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA  157 (503)
Q Consensus        80 -~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~  157 (503)
                       ........+++.|+|||++.+.   .++.++|||||||++|+|++ |.+||.+.+..+....+... .....+..++..
T Consensus       249 ~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~-~~~~~p~~~~~~  324 (373)
T 3c1x_A          249 SVHNKTGAKLPVKWMALESLQTQ---KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG-RRLLQPEYCPDP  324 (373)
T ss_dssp             ---------CCGGGSCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTT-CCCCCCTTCCHH
T ss_pred             cccccCCCCCcccccChHHhcCC---CCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcC-CCCCCCCCCCHH
Confidence             1112344577899999999743   68899999999999999999 78888877666665555443 345567789999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          158 VENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      +.++|.+||+.||++|||+.++++.|+.+...+..
T Consensus       325 l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~  359 (373)
T 3c1x_A          325 LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG  359 (373)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCS
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccc
Confidence            99999999999999999999999999998776653

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.96  E-value=8.1e-30  Score=270.68  Aligned_cols=182  Identities=20%  Similarity=0.323  Sum_probs=151.4

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.......+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......  
T Consensus       257 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~--  334 (452)
T 1fmk_A          257 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE--  334 (452)
T ss_dssp             ECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred             ehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCc--
Confidence            79998 599999976555679999999999999999999999999999999999999999999999999997654321  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........++..|+|||++..   +.++.++||||||+++|+|++ |..||.+....+....+.. ....+.+..+++.+
T Consensus       335 ~~~~~~~~~~~~y~aPE~~~~---~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~-~~~~~~~~~~~~~l  410 (452)
T 1fmk_A          335 YTARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER-GYRMPCPPECPESL  410 (452)
T ss_dssp             --------CCGGGSCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-TCCCCCCTTSCHHH
T ss_pred             eecccCCcccccccCHhHHhc---CCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCCCCCCCCCCHHH
Confidence            111223456788999999874   368999999999999999999 9999999888887777654 34556778899999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      .+||.+||+.||++|||+.++++.|+.+..
T Consensus       411 ~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~  440 (452)
T 1fmk_A          411 HDLMCQCWRKEPEERPTFEYLQAFLEDYFT  440 (452)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred             HHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence            999999999999999999999999987754

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.96  E-value=6e-30  Score=266.67  Aligned_cols=177  Identities=21%  Similarity=0.300  Sum_probs=142.8

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||.+|+|.+++..  ...+++.++..++.||+.||+|||++||+||||||+|||++ ++.+||+|||++....... ..
T Consensus       135 ~E~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~-~~  210 (390)
T 2zmd_A          135 MECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT-TS  210 (390)
T ss_dssp             EECCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-------
T ss_pred             EecCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCC-cc
Confidence            68777899999974  45799999999999999999999999999999999999995 5899999999997654321 11


Q ss_pred             CCCCCccCCCCCCCccccCCC--------CCCCCCCccchHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHhccCCCCCC
Q 010713           81 SDLPRRLGTPNYMAPEQWQPE--------VRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVVRRQEIPPIP  151 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~--------~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~-~~e~~~~i~~~~~~~~~~  151 (503)
                      .......||+.|+|||++.+.        ....++.++|||||||++|+|++|..||.... .......+........++
T Consensus       211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~  290 (390)
T 2zmd_A          211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP  290 (390)
T ss_dssp             ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCC
T ss_pred             ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCC
Confidence            123456799999999998642        12358899999999999999999999998753 334555555555555677


Q ss_pred             CCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          152 SGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       152 ~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ...+..+.+||.+||+.||.+||++.++++
T Consensus       291 ~~~~~~~~~li~~~L~~dP~~Rps~~ell~  320 (390)
T 2zmd_A          291 DIPEKDLQDVLKCCLKRDPKQRISIPELLA  320 (390)
T ss_dssp             CCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence            778999999999999999999999999998

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.96  E-value=1.4e-29  Score=258.23  Aligned_cols=183  Identities=19%  Similarity=0.184  Sum_probs=151.6

Q ss_pred             CcCCCCCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHH--HCCCeecccCCCcEEEcc-CCcEEEEecCCcccccC
Q 010713            1 MKFYEGSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLH--SKGILVLNLKPFNFILNE-ADRAVLGDVGIPHLLLG   75 (503)
Q Consensus         1 MEy~~GSL~d~L~~~--~~~~Ls~~~vl~i~~QIl~aL~yLH--s~gIvHrDLKP~NILld~-~~~vKL~DFGla~~~~~   75 (503)
                      |||++|+|.+.+...  ....+++..+..++.||+.||.|||  ++||+||||||+|||++. ++.+||+|||++.....
T Consensus       105 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~  184 (360)
T 3e3p_A          105 MEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSP  184 (360)
T ss_dssp             EECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCT
T ss_pred             eecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCC
Confidence            799999888776543  4667999999999999999999999  999999999999999997 88999999999976643


Q ss_pred             CCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC-------
Q 010713           76 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP-------  148 (503)
Q Consensus        76 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~-------  148 (503)
                          ........||+.|+|||++.+.  ..++.++|||||||++|+|++|..||.+.+..+....+......+       
T Consensus       185 ----~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (360)
T 3e3p_A          185 ----SEPNVAYICSRYYRAPELIFGN--QHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRK  258 (360)
T ss_dssp             ----TSCCCSTTSCGGGCCHHHHTTC--SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHH
T ss_pred             ----CCCcccccCCcceeCHHHHcCC--CCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHh
Confidence                2223456789999999998643  247899999999999999999999999988877776665422111       


Q ss_pred             -----------------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCC
Q 010713          149 -----------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGG  195 (503)
Q Consensus       149 -----------------------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~  195 (503)
                                             .....+++++.+||.+||+.||.+|||+.|+++      |+|+....
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~------hp~f~~~~  322 (360)
T 3e3p_A          259 LNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC------HPYFDELH  322 (360)
T ss_dssp             HCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT------SGGGGGGG
T ss_pred             cccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc------CccccccC
Confidence                                   122336789999999999999999999999998      88887644

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.96  E-value=8.6e-30  Score=252.69  Aligned_cols=187  Identities=20%  Similarity=0.225  Sum_probs=154.7

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++..  ...+++.++..++.||+.||+|||++||+|+||||+||+++.++.++|+|||++.....    
T Consensus       103 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~----  176 (298)
T 1phk_A          103 FDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP----  176 (298)
T ss_dssp             EECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT----
T ss_pred             EeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhcCC----
Confidence            78998 599999974  46799999999999999999999999999999999999999999999999999976543    


Q ss_pred             CCCCCCccCCCCCCCccccCCC---CCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCC--CCC
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGL  154 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~---~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~--~~~  154 (503)
                      ........+++.|+|||++.+.   ....++.++||||||+++|+|++|..||...+..+....+.........+  ..+
T Consensus       177 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (298)
T 1phk_A          177 GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDY  256 (298)
T ss_dssp             TCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGS
T ss_pred             CcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCccccccc
Confidence            2233456789999999987521   12357889999999999999999999999988887777776654333322  468


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCCC
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGH  199 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~~  199 (503)
                      +..+.+||.+||+.||.+|||+.++++      ++|+....+...
T Consensus       257 ~~~l~~li~~~l~~dp~~Rps~~~ll~------h~~~~~~~~~~~  295 (298)
T 1phk_A          257 SDTVKDLVSRFLVVQPQKRYTAEEALA------HPFFQQYVVEEV  295 (298)
T ss_dssp             CHHHHHHHHHHCCSSGGGSCCHHHHTT------SGGGCTTC----
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHHh------ChHhhhccchhh
Confidence            999999999999999999999999998      888877665443

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.96  E-value=1.1e-29  Score=259.66  Aligned_cols=181  Identities=15%  Similarity=0.230  Sum_probs=144.3

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++|+|.+.+.. ....+++.++..++.||+.||+|||++||+||||||+||+++.++.+||+|||++.....    .
T Consensus       113 ~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~----~  187 (362)
T 3pg1_A          113 TELMRTDLAQVIHD-QRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTA----D  187 (362)
T ss_dssp             EECCSEEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCTTC-----------
T ss_pred             EccCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEecCccccccc----c
Confidence            79999999999974 455799999999999999999999999999999999999999999999999999975432    2


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC-----------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-----------  149 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~-----------  149 (503)
                      .......+|+.|+|||++.+.  ..++.++|||||||++|+|++|..||.+....+....+......+.           
T Consensus       188 ~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  265 (362)
T 3pg1_A          188 ANKTHYVTHRWYRAPELVMQF--KGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPS  265 (362)
T ss_dssp             --------CGGGCCHHHHTTC--TTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHH
T ss_pred             cccceecccceecCcHHhcCC--CCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchh
Confidence            223456789999999998752  3588999999999999999999999999887777666654221111           


Q ss_pred             -------------------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCC
Q 010713          150 -------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDG  194 (503)
Q Consensus       150 -------------------~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~  194 (503)
                                         .+..+++.+.+||.+||+.||.+|||+.++++      |+|+...
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~------hp~f~~~  323 (362)
T 3pg1_A          266 ARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR------HPYFESL  323 (362)
T ss_dssp             HHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT------SGGGTTT
T ss_pred             hhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc------Cchhhhc
Confidence                               12456889999999999999999999999998      8887654

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.96  E-value=6e-30  Score=256.24  Aligned_cols=186  Identities=18%  Similarity=0.251  Sum_probs=140.9

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCc---EEEEecCCcccccCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR---AVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~---vKL~DFGla~~~~~~   76 (503)
                      |||++ |+|.+++..  ...+++.++..++.||+.||+|||++||+||||||+||+++.++.   +||+|||++......
T Consensus        90 ~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~  167 (316)
T 2ac3_A           90 FEKMRGGSILSHIHK--RRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN  167 (316)
T ss_dssp             EECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred             EEcCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence            79998 699999974  467999999999999999999999999999999999999988775   999999998765321


Q ss_pred             CC----CCCCCCCccCCCCCCCccccCCCC--CCCCCCccchHHHHHHHHHHHhCCCCCCCCCh---------------H
Q 010713           77 PL----PSSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSV---------------D  135 (503)
Q Consensus        77 ~~----~~~~~~~~~Gt~~Y~APE~l~~~~--~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~---------------~  135 (503)
                      ..    .........||+.|+|||++.+..  ...++.++|||||||++|+|++|..||.+...               .
T Consensus       168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  247 (316)
T 2ac3_A          168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN  247 (316)
T ss_dssp             --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHH
T ss_pred             CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHH
Confidence            10    111223456999999999986310  12477899999999999999999999987542               2


Q ss_pred             HHHHHHHhccCCCCCC----CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCC
Q 010713          136 EIYDAVVRRQEIPPIP----SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGW  196 (503)
Q Consensus       136 e~~~~i~~~~~~~~~~----~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w  196 (503)
                      .....+.....  .++    ..+++.+.+||.+||+.||.+|||+.|+++      ++|+....+
T Consensus       248 ~~~~~i~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~------hp~~~~~~~  304 (316)
T 2ac3_A          248 MLFESIQEGKY--EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ------HPWVQGCAP  304 (316)
T ss_dssp             HHHHHHHHCCC--CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH------STTCC----
T ss_pred             HHHHHHhccCc--ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc------ChhhcCCCC
Confidence            34444444322  222    468899999999999999999999999999      888876543

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.96  E-value=4.4e-30  Score=260.73  Aligned_cols=179  Identities=20%  Similarity=0.255  Sum_probs=128.0

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC---cEEEEecCCcccccCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD---RAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~---~vKL~DFGla~~~~~~   76 (503)
                      ||||+| +|.+++.  ....+++.++..++.||+.||+|||++||+||||||+|||++.++   .+||+|||++......
T Consensus        85 ~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~  162 (325)
T 3kn6_A           85 MELLNGGELFERIK--KKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD  162 (325)
T ss_dssp             ECCCCSCBHHHHHH--HCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred             EEccCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence            799985 9999997  457799999999999999999999999999999999999998765   8999999999765431


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCh-------HHHHHHHHhccCCCC
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV-------DEIYDAVVRRQEIPP  149 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-------~e~~~~i~~~~~~~~  149 (503)
                         ........+|+.|+|||++.+.   .++.++|||||||++|+|++|..||.....       .+....+........
T Consensus       163 ---~~~~~~~~~t~~y~aPE~~~~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~  236 (325)
T 3kn6_A          163 ---NQPLKTPCFTLHYAAPELLNQN---GYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFE  236 (325)
T ss_dssp             ------------------------C---CCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCC
T ss_pred             ---CCcccccCCCcCccCHHHhcCC---CCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCC
Confidence               2233456789999999999744   688999999999999999999999986432       344555443322111


Q ss_pred             C--CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          150 I--PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       150 ~--~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      .  ...+++++.+||.+||+.||.+|||+.++++      ++|+..
T Consensus       237 ~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~------h~w~~~  276 (325)
T 3kn6_A          237 GEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY------NEWLQD  276 (325)
T ss_dssp             SHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT------CGGGCT
T ss_pred             cccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc------Chhhcc
Confidence            1  1368999999999999999999999999987      888764

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.96  E-value=1.1e-29  Score=272.37  Aligned_cols=171  Identities=25%  Similarity=0.369  Sum_probs=149.9

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+ |+|.+++.  ..+.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....    
T Consensus        95 ~E~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~----  168 (476)
T 2y94_A           95 MEYVSGGELFDYIC--KNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD----  168 (476)
T ss_dssp             EECCSSEEHHHHTT--SSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCT----
T ss_pred             EeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhccc----
Confidence            79997 49999986  567899999999999999999999999999999999999999999999999999987643    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      .......+||+.|+|||++.+..  ..+.++|||||||++|+|++|..||.+......+..+...  ....+..+++++.
T Consensus       169 ~~~~~~~~gt~~y~aPE~~~~~~--~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~  244 (476)
T 2y94_A          169 GEFLRTSCGSPNYAAPEVISGRL--YAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDG--IFYTPQYLNPSVI  244 (476)
T ss_dssp             TCCBCCCCSCSTTCCHHHHTTCC--BCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTT--CCCCCTTCCHHHH
T ss_pred             cccccccCCCcCeEChhhccCCC--CCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC--CcCCCccCCHHHH
Confidence            22334568999999999998542  2367999999999999999999999998888888777653  3456678999999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 010713          160 NVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +||.+||+.||.+|||+.++++
T Consensus       245 ~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          245 SLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHcCCCchhCcCHHHHHh
Confidence            9999999999999999999998

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.96  E-value=1.3e-29  Score=279.64  Aligned_cols=185  Identities=19%  Similarity=0.277  Sum_probs=152.8

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+| +|.+++.. ....+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++........
T Consensus       414 ~E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~  492 (613)
T 2ozo_A          414 MEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY  492 (613)
T ss_dssp             EECCTTCBHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----
T ss_pred             EEeCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCce
Confidence            799985 99999964 4567999999999999999999999999999999999999999999999999999765432211


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........+++.|+|||++.+   ..++.++|||||||++|||++ |..||.+.+..+....+.. ......+..+++++
T Consensus       493 ~~~~~~~~~~~~y~APE~~~~---~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~-~~~~~~p~~~~~~l  568 (613)
T 2ozo_A          493 YTARSAGKWPLKWYAPECINF---RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ-GKRMECPPECPPEL  568 (613)
T ss_dssp             ---------CCTTSCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHT-TCCCCCCTTCCHHH
T ss_pred             eeeccCCCCccceeCHhhhcC---CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc-CCCCCCCCcCCHHH
Confidence            112223345689999999974   368999999999999999998 9999999888887776654 34566788899999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccCc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNSV  190 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~  190 (503)
                      .+||.+||+.||++||++.++++.|+.+....
T Consensus       569 ~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~  600 (613)
T 2ozo_A          569 YALMSDCWIYKWEDRPDFLTVEQRMRACYYSL  600 (613)
T ss_dssp             HHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999875544

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.96  E-value=3.8e-30  Score=270.65  Aligned_cols=184  Identities=20%  Similarity=0.303  Sum_probs=140.4

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC---cEEEEecCCcccccCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD---RAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~---~vKL~DFGla~~~~~~   76 (503)
                      |||++| +|.+++.  ....+++.++..++.||+.||+|||++||+||||||+|||++.++   .+||+|||++..... 
T Consensus       218 ~e~~~~g~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~-  294 (419)
T 3i6u_A          218 LELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-  294 (419)
T ss_dssp             EECCTTCBGGGGTS--SSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC--
T ss_pred             EEcCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceecCC-
Confidence            799985 8988885  567899999999999999999999999999999999999997554   599999999977543 


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhccCC--CCCCCC
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE-IYDAVVRRQEI--PPIPSG  153 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e-~~~~i~~~~~~--~~~~~~  153 (503)
                         ........||+.|+|||++.+.....++.++|||||||++|+|++|..||....... ....+......  +.....
T Consensus       295 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~  371 (419)
T 3i6u_A          295 ---TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAE  371 (419)
T ss_dssp             -------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTT
T ss_pred             ---CccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcc
Confidence               223345679999999999865334568889999999999999999999998654332 23333322211  112256


Q ss_pred             CcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCC
Q 010713          154 LPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGW  196 (503)
Q Consensus       154 ~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w  196 (503)
                      +++.+.+||.+||+.||.+|||+.++++      |+|+.+.+|
T Consensus       372 ~~~~~~~li~~~L~~dP~~Rps~~e~l~------hp~~~~~~~  408 (419)
T 3i6u_A          372 VSEKALDLVKKLLVVDPKARFTTEEALR------HPWLQDEDM  408 (419)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHHH------SGGGCCHHH
T ss_pred             cCHHHHHHHHHHccCChhHCcCHHHHhC------CcccCChhH
Confidence            8999999999999999999999999998      888876544

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.96  E-value=1.5e-29  Score=256.53  Aligned_cols=184  Identities=16%  Similarity=0.289  Sum_probs=154.7

Q ss_pred             CcCCCC-CHHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEE
Q 010713            1 MKFYEG-SVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG   65 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~--------------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~   65 (503)
                      |||++| +|.+++....              ...+++.+++.++.||+.||+|||++||+||||||+||+++.++.+||+
T Consensus       120 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~  199 (334)
T 2pvf_A          120 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIA  199 (334)
T ss_dssp             EECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEEC
T ss_pred             EECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEc
Confidence            789985 9999997532              1348999999999999999999999999999999999999999999999


Q ss_pred             ecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc
Q 010713           66 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR  144 (503)
Q Consensus        66 DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~  144 (503)
                      |||++........ ........+++.|+|||++.+.   .++.++|||||||++|+|++ |..||.+....+....+...
T Consensus       200 Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~  275 (334)
T 2pvf_A          200 DFGLARDINNIDY-YKKTTNGRLPVKWMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG  275 (334)
T ss_dssp             CCTTCEECTTTSS-EECCSCCCCCGGGCCHHHHHHC---EECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHT
T ss_pred             ccccccccccccc-ccccCCCCcccceeChHHhcCC---CcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcC
Confidence            9999976543211 1122344567889999998743   57899999999999999999 99999998888777666543


Q ss_pred             cCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       145 ~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                       .....+..++..+.++|.+||+.||.+||++.++++.|+.+...
T Consensus       276 -~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~  319 (334)
T 2pvf_A          276 -HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL  319 (334)
T ss_dssp             -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence             34556788999999999999999999999999999999988654

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.96  E-value=1e-29  Score=262.12  Aligned_cols=177  Identities=21%  Similarity=0.270  Sum_probs=134.5

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCc--EEEEecCCcccccCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR--AVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~--vKL~DFGla~~~~~~~   77 (503)
                      ||||+ |+|.+++..  .+.+++.+++.++.||+.||+|||++||+||||||+||+++.++.  +||+|||++.....  
T Consensus        95 ~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~--  170 (361)
T 3uc3_A           95 MEYASGGELYERICN--AGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL--  170 (361)
T ss_dssp             EECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred             EEeCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccc--
Confidence            79997 599999964  457999999999999999999999999999999999999987765  99999999874322  


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCC-CccchHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHhccCCCCCCC
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPIS-FETDSWGFACSIIEMLTGVQPRCGRSV----DEIYDAVVRRQEIPPIPS  152 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s-~ksDIwSLGviLyeLltG~~Pf~~~~~----~e~~~~i~~~~~~~~~~~  152 (503)
                        ........||+.|+|||++.+.   .++ .++|||||||++|+|++|..||.+...    ......+.......+...
T Consensus       171 --~~~~~~~~gt~~y~aPE~~~~~---~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (361)
T 3uc3_A          171 --HSQPKSTVGTPAYIAPEVLLRQ---EYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDI  245 (361)
T ss_dssp             ------------CTTSCHHHHHCS---SCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTS
T ss_pred             --cCCCCCCcCCCCcCChhhhcCC---CCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcC
Confidence              2223456799999999998753   344 448999999999999999999987443    344444444433344445


Q ss_pred             CCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          153 GLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       153 ~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      .+++.+.+||.+||+.||.+|||+.|+++      |+|+.
T Consensus       246 ~~s~~~~~li~~~L~~dP~~Rps~~ell~------hp~f~  279 (361)
T 3uc3_A          246 RISPECCHLISRIFVADPATRISIPEIKT------HSWFL  279 (361)
T ss_dssp             CCCHHHHHHHHHHSCSCTTTSCCHHHHHT------SHHHH
T ss_pred             CCCHHHHHHHHHHccCChhHCcCHHHHHh------Ccchh
Confidence            78999999999999999999999999998      66653

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.96  E-value=4.4e-30  Score=253.69  Aligned_cols=177  Identities=19%  Similarity=0.296  Sum_probs=143.9

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCc--------EEEEecCCcc
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR--------AVLGDVGIPH   71 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~--------vKL~DFGla~   71 (503)
                      |||++ |+|.+++.. ....+++.+++.++.||+.||+|||++||+||||||+|||++.++.        +||+|||++.
T Consensus        91 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~  169 (289)
T 4fvq_A           91 QEFVKFGSLDTYLKK-NKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISI  169 (289)
T ss_dssp             EECCTTCBHHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCT
T ss_pred             EECCCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCcccc
Confidence            79998 599999975 3345999999999999999999999999999999999999998887        9999999886


Q ss_pred             cccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHhccCCCCC
Q 010713           72 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG-VQPRCGRSVDEIYDAVVRRQEIPPI  150 (503)
Q Consensus        72 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG-~~Pf~~~~~~e~~~~i~~~~~~~~~  150 (503)
                      ....       .....+++.|+|||++.+.  ..++.++|||||||++|+|++| .+||.............   .....
T Consensus       170 ~~~~-------~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~---~~~~~  237 (289)
T 4fvq_A          170 TVLP-------KDILQERIPWVPPECIENP--KNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYE---DRHQL  237 (289)
T ss_dssp             TTSC-------HHHHHHTTTTSCHHHHHCG--GGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH---TTCCC
T ss_pred             cccC-------ccccCCcCcccCHHHhCCC--CCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhh---ccCCC
Confidence            5422       1234578899999998742  3578999999999999999995 55565555544443332   34455


Q ss_pred             CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCc
Q 010713          151 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSV  190 (503)
Q Consensus       151 ~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~  190 (503)
                      +...++++.+||.+||+.||.+|||+.++++.|+++..+.
T Consensus       238 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~  277 (289)
T 4fvq_A          238 PAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD  277 (289)
T ss_dssp             CCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred             CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence            6677899999999999999999999999999999887644

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.96  E-value=1.3e-29  Score=261.67  Aligned_cols=175  Identities=20%  Similarity=0.252  Sum_probs=137.3

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++|+|.+.+.    ..+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....    .
T Consensus       109 ~e~~~~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~----~  180 (371)
T 2xrw_A          109 MELMDANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----S  180 (371)
T ss_dssp             EECCSEEHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC-----------
T ss_pred             EEcCCCCHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccccccc----c
Confidence            7999999999885    3589999999999999999999999999999999999999999999999999976532    1


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------  148 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~------------  148 (503)
                      .......||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.+..+.+..+......+            
T Consensus       181 ~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  257 (371)
T 2xrw_A          181 FMMTPYVVTRYYRAPEVILGM---GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV  257 (371)
T ss_dssp             ---------CTTCCHHHHTTC---CCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHH
T ss_pred             cccCCceecCCccCHHHhcCC---CCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHH
Confidence            223456789999999999854   68899999999999999999999999988877776665432211            


Q ss_pred             --------CC--------------CC------CCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          149 --------PI--------------PS------GLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       149 --------~~--------------~~------~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                              .+              +.      ..+..+.+||.+||+.||.+|||+.|+++      ++|+.
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~------hp~~~  323 (371)
T 2xrw_A          258 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ------HPYIN  323 (371)
T ss_dssp             HHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH------SHHHH
T ss_pred             HHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC------Ccchh
Confidence                    00              00      01567999999999999999999999999      77765

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.96  E-value=4.1e-31  Score=273.21  Aligned_cols=168  Identities=14%  Similarity=0.176  Sum_probs=133.4

Q ss_pred             CcCCCCCHHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccC
Q 010713            1 MKFYEGSVGDRMAQLKG-----GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG   75 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~-----~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~   75 (503)
                      |||++|+|.+++.....     ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus       179 ~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~  258 (377)
T 3byv_A          179 YPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA  258 (377)
T ss_dssp             EECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTC
T ss_pred             EeccCCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhheecCC
Confidence            78999999999985321     1233488889999999999999999999999999999999999999999999976322


Q ss_pred             CCCCCCCCCCccCCCCCCCccccCCC--------CCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC
Q 010713           76 IPLPSSDLPRRLGTPNYMAPEQWQPE--------VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI  147 (503)
Q Consensus        76 ~~~~~~~~~~~~Gt~~Y~APE~l~~~--------~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~  147 (503)
                            ......| +.|+|||++.+.        ....++.++|||||||++|+|++|..||.+....+....+.     
T Consensus       259 ------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~~-----  326 (377)
T 3byv_A          259 ------RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIF-----  326 (377)
T ss_dssp             ------EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGGGG-----
T ss_pred             ------cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhhhh-----
Confidence                  2234567 999999998742        00158899999999999999999999997755433322221     


Q ss_pred             CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          148 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       148 ~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                       .....+++++.+||.+||+.||++||++.++++
T Consensus       327 -~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  359 (377)
T 3byv_A          327 -RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAME  359 (377)
T ss_dssp             -SSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred             -hhccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence             123678999999999999999999999999997

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.96  E-value=5.2e-31  Score=271.64  Aligned_cols=173  Identities=17%  Similarity=0.136  Sum_probs=136.6

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHH------HHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCccccc
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNV------FRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL   74 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~v------l~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~   74 (503)
                      ||||+|+|.+++... +..++...+      ..++.||+.||+|||++||+||||||+|||++.++.+||+|||++....
T Consensus       167 ~e~~~~~L~~~l~~~-~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~  245 (371)
T 3q60_A          167 MPAASVDLELLFSTL-DFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVG  245 (371)
T ss_dssp             ECCCSEEHHHHHHHH-HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGEEETT
T ss_pred             ecCCCCCHHHHHHHh-ccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEecceeeecC
Confidence            799999999999863 233455555      6778999999999999999999999999999999999999999997653


Q ss_pred             CCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHH--HHH---HH--hccCC
Q 010713           75 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI--YDA---VV--RRQEI  147 (503)
Q Consensus        75 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~--~~~---i~--~~~~~  147 (503)
                      .      ......+|+.|+|||++.+. ...++.++|||||||++|+|++|+.||.+......  +..   ..  .....
T Consensus       246 ~------~~~~~~~t~~y~aPE~~~~~-~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  318 (371)
T 3q60_A          246 T------RGPASSVPVTYAPREFLNAS-TATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLA  318 (371)
T ss_dssp             C------EEEGGGSCGGGCCHHHHTCS-EEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCC
T ss_pred             C------CccCccCCcCCcChhhccCC-CCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccc
Confidence            2      11245677999999999742 23689999999999999999999999987643211  000   00  00111


Q ss_pred             CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          148 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       148 ~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      .+....+++.+.+||.+||+.||++|||+.++++
T Consensus       319 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          319 FGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             CTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             hhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            2223578999999999999999999999999987

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.96  E-value=1.3e-29  Score=248.59  Aligned_cols=171  Identities=22%  Similarity=0.339  Sum_probs=139.6

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ ++|.+++..  ...+++.++..++.||+.||+|||++||+|+||||+||+++.++.++|+|||++......   
T Consensus        90 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~---  164 (276)
T 2h6d_A           90 MEYVSGGELFDYICK--HGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG---  164 (276)
T ss_dssp             EECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC----
T ss_pred             EeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCC---
Confidence            78997 599999974  457999999999999999999999999999999999999999999999999998765431   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                       .......+++.|+|||.+.+..  ..+.++|+||||+++|+|++|..||......+....+...  ....+..++..+.
T Consensus       165 -~~~~~~~~~~~y~aPE~~~~~~--~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~  239 (276)
T 2h6d_A          165 -EFLRTSCGSPNYAAPEVISGRL--YAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGG--VFYIPEYLNRSVA  239 (276)
T ss_dssp             -------------CCTGGGTTSC--CCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCTTSCHHHH
T ss_pred             -cceecccCCccccCHHHHcCCC--CCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcC--cccCchhcCHHHH
Confidence             2223457899999999997541  2367999999999999999999999988887777766543  3446778899999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 010713          160 NVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ++|.+||+.||.+|||+.++++
T Consensus       240 ~li~~~l~~~p~~Rps~~~~l~  261 (276)
T 2h6d_A          240 TLLMHMLQVDPLKRATIKDIRE  261 (276)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHccCChhhCCCHHHHHh
Confidence            9999999999999999999998

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.96  E-value=1.1e-29  Score=272.94  Aligned_cols=181  Identities=20%  Similarity=0.379  Sum_probs=155.5

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......  
T Consensus       295 ~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~--  372 (495)
T 1opk_A          295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--  372 (495)
T ss_dssp             EECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC--
T ss_pred             EEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCCc--
Confidence            79998 699999986556779999999999999999999999999999999999999999999999999998754321  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........++..|+|||++...   .++.++|||||||++|||++ |..||.+.+..+....+.. ......+..+++.+
T Consensus       373 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l  448 (495)
T 1opk_A          373 YTAHAGAKFPIKWTAPESLAYN---KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRMERPEGCPEKV  448 (495)
T ss_dssp             EECCTTCCCCGGGCCHHHHHHC---EECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT-TCCCCCCTTCCHHH
T ss_pred             eeecCCCcCCcceeCHhHHhcC---CCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCCCCCCCCCCHHH
Confidence            1122234567789999999743   68899999999999999999 9999999888777665543 44556778899999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQ  187 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~  187 (503)
                      .+||.+||+.||.+|||+.++++.|+.+.
T Consensus       449 ~~li~~cl~~dP~~RPs~~el~~~L~~~~  477 (495)
T 1opk_A          449 YELMRACWQWNPSDRPSFAEIHQAFETMF  477 (495)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             HHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence            99999999999999999999999998764

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.96  E-value=3.5e-29  Score=250.30  Aligned_cols=183  Identities=19%  Similarity=0.397  Sum_probs=140.5

Q ss_pred             CcCCCC-CHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCC
Q 010713            1 MKFYEG-SVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~--~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~   77 (503)
                      |||++| +|.+++...  ....+++.+++.++.||+.||+|||++||+|+||||+||+++.++.++|+|||++...... 
T Consensus       111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~-  189 (310)
T 2wqm_A          111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK-  189 (310)
T ss_dssp             EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC----------
T ss_pred             EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCC-
Confidence            789985 999999753  3567999999999999999999999999999999999999999999999999998765331 


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHhccCCCCCCCCCc
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS--VDEIYDAVVRRQEIPPIPSGLP  155 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~--~~e~~~~i~~~~~~~~~~~~~s  155 (503)
                        ........+++.|+|||++.+.   .++.++||||||+++|+|++|..||.+..  .......+......+.....++
T Consensus       190 --~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (310)
T 2wqm_A          190 --TTAAHSLVGTPYYMSPERIHEN---GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYS  264 (310)
T ss_dssp             -----------CCSSCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSC
T ss_pred             --CccccccCCCeeEeChHHhCCC---CCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccC
Confidence              1222345789999999999754   68899999999999999999999997643  3344444444333333346789


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          156 PAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      +++.+||.+||+.||.+|||+.++++.|+++...
T Consensus       265 ~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~  298 (310)
T 2wqm_A          265 EELRQLVNMCINPDPEKRPDVTYVYDVAKRMHAC  298 (310)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999988653

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.96  E-value=3.7e-30  Score=259.55  Aligned_cols=184  Identities=18%  Similarity=0.330  Sum_probs=150.1

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.   ...+++.+++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++.........
T Consensus       114 ~e~~~~~~L~~~l~---~~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~  190 (318)
T 3lxp_A          114 MEYVPLGSLRDYLP---RHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY  190 (318)
T ss_dssp             ECCCTTCBHHHHGG---GSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSE
T ss_pred             EecccCCcHHHHHh---hCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccccccccccc
Confidence            799985 9999985   345999999999999999999999999999999999999999999999999999876442211


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChH--------------HHHHHHHhcc
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD--------------EIYDAVVRRQ  145 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~--------------e~~~~i~~~~  145 (503)
                      ........+++.|+|||++.+.   .++.++|||||||++|+|++|..||......              ..........
T Consensus       191 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (318)
T 3lxp_A          191 YRVREDGDSPVFWYAPECLKEY---KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG  267 (318)
T ss_dssp             EEC---CCCCGGGCCHHHHHHC---EEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred             cccccCCCCCceeeChHHhcCC---CCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcc
Confidence            1223345678889999999743   5788999999999999999999998753221              1122333444


Q ss_pred             CCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCc
Q 010713          146 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSV  190 (503)
Q Consensus       146 ~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~  190 (503)
                      ...+.+..+++.+.+||.+||+.||.+|||+.++++.|+.+...+
T Consensus       268 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~  312 (318)
T 3lxp_A          268 ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY  312 (318)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence            556677889999999999999999999999999999999887654

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.96  E-value=1.6e-29  Score=250.98  Aligned_cols=171  Identities=24%  Similarity=0.380  Sum_probs=148.4

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ ++|.+++..  ...+++.+++.++.||+.||+|||++||+|+||||+||+++.++.++|+|||++......   
T Consensus        94 ~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~---  168 (294)
T 2rku_A           94 LELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD---  168 (294)
T ss_dssp             EECCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCST---
T ss_pred             EecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccC---
Confidence            78998 589998863  467999999999999999999999999999999999999999999999999999765421   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........||+.|+|||++.+.   .++.++|+||||+++|+|++|..||......+....+..  ....++..+++.+.
T Consensus       169 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  243 (294)
T 2rku_A          169 GERKKVLCGTPNYIAPEVLSKK---GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK--NEYSIPKHINPVAA  243 (294)
T ss_dssp             TCCBCCCCSCCSSCCHHHHTTS---CBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT--TCCCCCTTSCHHHH
T ss_pred             ccccccccCCCCcCCcchhccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhh--ccCCCccccCHHHH
Confidence            2223456789999999999754   578899999999999999999999999888777766654  33456778999999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 010713          160 NVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ++|.+||+.||++|||+.++++
T Consensus       244 ~li~~~l~~~p~~Rps~~~ll~  265 (294)
T 2rku_A          244 SLIQKMLQTDPTARPTINELLN  265 (294)
T ss_dssp             HHHHHHTCSSGGGSCCGGGGGG
T ss_pred             HHHHHHcccChhhCcCHHHHhh
Confidence            9999999999999999999998

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.96  E-value=1.1e-29  Score=281.17  Aligned_cols=182  Identities=18%  Similarity=0.265  Sum_probs=152.1

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+| +|.+++.  ....+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++........
T Consensus       448 ~E~~~~g~L~~~l~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~  525 (635)
T 4fl3_A          448 MEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY  525 (635)
T ss_dssp             EECCTTEEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred             EEccCCCCHHHHHh--hCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence            799985 9999996  4567999999999999999999999999999999999999999999999999999876443222


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........+|+.|+|||++.+   ..++.++|||||||++|||++ |+.||.+....+....+.. ......+..+++++
T Consensus       526 ~~~~~~~~~t~~y~APE~~~~---~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~-~~~~~~p~~~~~~l  601 (635)
T 4fl3_A          526 YKAQTHGKWPVKWYAPECINY---YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK-GERMGCPAGCPREM  601 (635)
T ss_dssp             ---------CGGGSCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-TCCCCCCTTCCHHH
T ss_pred             cccccCCCCceeeeChhhhcC---CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCCCCCCCCCCHHH
Confidence            222334456788999999974   368999999999999999998 9999999988887776654 34566788999999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      .+||.+||+.||++||++.++++.|+.+..
T Consensus       602 ~~li~~cl~~dP~~RPs~~~l~~~L~~~~~  631 (635)
T 4fl3_A          602 YDLMNLCWTYDVENRPGFAAVELRLRNYYY  631 (635)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            999999999999999999999999987643

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.96  E-value=7.8e-30  Score=258.54  Aligned_cols=167  Identities=19%  Similarity=0.268  Sum_probs=135.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC--cEEEEecCCcccccCCCC-CCCCCCCccCCCCCCCcc
Q 010713           20 LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD--RAVLGDVGIPHLLLGIPL-PSSDLPRRLGTPNYMAPE   96 (503)
Q Consensus        20 Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~--~vKL~DFGla~~~~~~~~-~~~~~~~~~Gt~~Y~APE   96 (503)
                      +++..++.++.||+.||+|||++||+||||||+||+++.++  .+||+|||++........ .........||+.|+|||
T Consensus       165 ~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE  244 (345)
T 3hko_A          165 QREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPE  244 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCch
Confidence            46788999999999999999999999999999999998776  899999999976533211 111234567999999999


Q ss_pred             ccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCC--CCCcHHHHHHHHHhhhcCCCCCC
Q 010713           97 QWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDLRSRP  174 (503)
Q Consensus        97 ~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~--~~~s~~l~~LI~~cL~~DP~~RP  174 (503)
                      ++.+. ...++.++|||||||++|+|++|..||.+....+....+.........+  ..+++.+.+||.+||+.||.+||
T Consensus       245 ~~~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  323 (345)
T 3hko_A          245 VLNTT-NESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERF  323 (345)
T ss_dssp             HHTCS-SSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSC
T ss_pred             hhccC-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCC
Confidence            99743 3468899999999999999999999999998888888777655433333  34899999999999999999999


Q ss_pred             CHHHHHHHHHhhccCcCCC
Q 010713          175 LMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       175 S~~elL~~L~~i~~~~~~~  193 (503)
                      ++.++++      ++|+..
T Consensus       324 s~~~~l~------hp~~~~  336 (345)
T 3hko_A          324 DAMRALQ------HPWISQ  336 (345)
T ss_dssp             CHHHHHH------SHHHHT
T ss_pred             CHHHHhc------Chhhcc
Confidence            9999998      666554

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.96  E-value=2.1e-29  Score=256.11  Aligned_cols=177  Identities=23%  Similarity=0.374  Sum_probs=151.8

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ ++|.+++..  ...+++.+++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++......   
T Consensus       120 ~e~~~~~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~---  194 (335)
T 2owb_A          120 LELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD---  194 (335)
T ss_dssp             ECCCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCST---
T ss_pred             EecCCCCCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccC---
Confidence            79998 589998863  467999999999999999999999999999999999999999999999999999765421   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........||+.|+|||++.+.   .++.++||||||+++|+|++|..||......+.+..+...  ...++..+++.+.
T Consensus       195 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  269 (335)
T 2owb_A          195 GERKKVLCGTPNYIAPEVLSKK---GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--EYSIPKHINPVAA  269 (335)
T ss_dssp             TCCBCCCCSCCSSCCHHHHHTS---CBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT--CCCCCTTSCHHHH
T ss_pred             cccccccCCCccccCHHHhccC---CCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcC--CCCCCccCCHHHH
Confidence            2223456789999999999754   5788999999999999999999999988877777666553  3456778999999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          160 NVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      +||.+||+.||++||++.++++      ++|+..
T Consensus       270 ~li~~~l~~dp~~Rps~~ell~------~~~~~~  297 (335)
T 2owb_A          270 SLIQKMLQTDPTARPTINELLN------DEFFTS  297 (335)
T ss_dssp             HHHHHHTCSSGGGSCCGGGGGG------SHHHHT
T ss_pred             HHHHHHccCChhHCcCHHHHhc------CccccC
Confidence            9999999999999999999998      555543

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.96  E-value=3.3e-29  Score=258.60  Aligned_cols=177  Identities=21%  Similarity=0.288  Sum_probs=145.5

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++|+|.+++.    ..+++.++..++.||+.||+|||++||+||||||+||+++.++.+||+|||++.....     
T Consensus       126 ~e~~~~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~-----  196 (371)
T 4exu_A          126 MPFMQTDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA-----  196 (371)
T ss_dssp             EECCCEEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC----------
T ss_pred             EccccccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCccccccc-----
Confidence            6899998888773    4599999999999999999999999999999999999999999999999999876532     


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------  148 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~------------  148 (503)
                       ......+|+.|+|||++.+.  ..++.++|||||||++|+|++|..||.+.+..+....+......+            
T Consensus       197 -~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  273 (371)
T 4exu_A          197 -EMTGYVVTRWYRAPEVILSW--MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKA  273 (371)
T ss_dssp             ----CTTCCCTTSCHHHHSCC--SCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHH
T ss_pred             -CcCCcccCccccCHHHhcCC--CCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhh
Confidence             23456789999999998752  368899999999999999999999999988777666654422111            


Q ss_pred             -----------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCC
Q 010713          149 -----------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGG  195 (503)
Q Consensus       149 -----------------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~  195 (503)
                                       .....+++.+.+||.+||+.||++|||+.|+++      ++|+....
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~------hp~f~~~~  331 (371)
T 4exu_A          274 AKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT------HPFFEPFR  331 (371)
T ss_dssp             HHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT------SGGGTTTC
T ss_pred             hhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc------CcccccCC
Confidence                             012457899999999999999999999999998      88887543

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.96  E-value=2.2e-29  Score=269.16  Aligned_cols=171  Identities=20%  Similarity=0.342  Sum_probs=146.7

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEc---cCCcEEEEecCCcccccCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN---EADRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld---~~~~vKL~DFGla~~~~~~   76 (503)
                      ||||+| +|.+.+..  ...+++.++..++.||+.||+|||++||+||||||+|||++   .++.+||+|||++..... 
T Consensus       100 ~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~-  176 (486)
T 3mwu_A          100 GELYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ-  176 (486)
T ss_dssp             ECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC-
T ss_pred             EEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC-
Confidence            789985 99998874  46799999999999999999999999999999999999995   456799999999976543 


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCC--CCC
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGL  154 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~--~~~  154 (503)
                         ........||+.|+|||++.+    .++.++|||||||++|+|++|..||.+.+..+....+.........+  ..+
T Consensus       177 ---~~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  249 (486)
T 3mwu_A          177 ---NTKMKDRIGTAYYIAPEVLRG----TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTI  249 (486)
T ss_dssp             ---C----CCTTGGGGCCGGGGGS----CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGS
T ss_pred             ---CCccCCCcCCCCCCCHHHhCC----CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCC
Confidence               223345679999999999864    48899999999999999999999999999988888887755443333  568


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ++++.+||.+||+.||.+|||+.++++
T Consensus       250 s~~~~~li~~~L~~dp~~R~t~~~~l~  276 (486)
T 3mwu_A          250 SDDAKDLIRKMLTFHPSLRITATQCLE  276 (486)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            999999999999999999999999998

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.96  E-value=1.2e-29  Score=255.34  Aligned_cols=185  Identities=19%  Similarity=0.241  Sum_probs=145.0

Q ss_pred             CcCCC-CCHHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEE----ccCCcEEEEecCCccccc
Q 010713            1 MKFYE-GSVGDRMAQLK-GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL----NEADRAVLGDVGIPHLLL   74 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~-~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILl----d~~~~vKL~DFGla~~~~   74 (503)
                      |||++ |+|.+++.... ...+++.+++.++.||+.||+|||++||+||||||+|||+    +.++.+||+|||++....
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~  167 (319)
T 4euu_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE  167 (319)
T ss_dssp             EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECC
T ss_pred             EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecC
Confidence            79998 59999997543 2349999999999999999999999999999999999999    777789999999998764


Q ss_pred             CCCCCCCCCCCccCCCCCCCccccCCC-----CCCCCCCccchHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHHhcc
Q 010713           75 GIPLPSSDLPRRLGTPNYMAPEQWQPE-----VRGPISFETDSWGFACSIIEMLTGVQPRCGRS----VDEIYDAVVRRQ  145 (503)
Q Consensus        75 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~-----~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~----~~e~~~~i~~~~  145 (503)
                      .    ........||+.|+|||++...     ....++.++|||||||++|+|++|..||....    ..+....+....
T Consensus       168 ~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  243 (319)
T 4euu_A          168 D----DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK  243 (319)
T ss_dssp             T----TCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHC
T ss_pred             C----CCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCC
Confidence            3    2223456799999999987521     12367899999999999999999999997432    234444444332


Q ss_pred             CCC-----------------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          146 EIP-----------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       146 ~~~-----------------------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      ...                       .++..++..+.++|.+||+.||++|||+.|+++......+.
T Consensus       244 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~  310 (319)
T 4euu_A          244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR  310 (319)
T ss_dssp             CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC-
T ss_pred             CcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhc
Confidence            210                       12233457889999999999999999999999988776553

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.96  E-value=1.9e-29  Score=251.93  Aligned_cols=176  Identities=20%  Similarity=0.333  Sum_probs=150.1

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEE---ccCCcEEEEecCCcccccCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL---NEADRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILl---d~~~~vKL~DFGla~~~~~~   76 (503)
                      |||++ |+|.+++..  .+.+++.++..++.||+.||+|||++||+|+||||+||++   +.++.++|+|||++..... 
T Consensus        85 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~-  161 (304)
T 2jam_A           85 MQLVSGGELFDRILE--RGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN-  161 (304)
T ss_dssp             ECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC-
T ss_pred             EEcCCCccHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC-
Confidence            79997 599999874  4579999999999999999999999999999999999999   7788999999999865422 


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC--CCCCCC
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP--PIPSGL  154 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~--~~~~~~  154 (503)
                          .......|++.|+|||++.+.   .++.++|||||||++|+|++|..||......+....+.......  +....+
T Consensus       162 ----~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  234 (304)
T 2jam_A          162 ----GIMSTACGTPGYVAPEVLAQK---PYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDI  234 (304)
T ss_dssp             ----BTTHHHHSCCCBCCTTTBSSC---SCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTS
T ss_pred             ----CccccccCCCCccChHHhccC---CCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccC
Confidence                122345689999999999754   68899999999999999999999999988888877776654332  344678


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      ++.+.+||.+||+.||.+||++.++++      ++|+.
T Consensus       235 ~~~~~~li~~~l~~dp~~Rps~~~~l~------h~~~~  266 (304)
T 2jam_A          235 SESAKDFICHLLEKDPNERYTCEKALS------HPWID  266 (304)
T ss_dssp             CHHHHHHHHHHHCSSTTTSCCHHHHHT------SHHHH
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHhc------Ccccc
Confidence            999999999999999999999999998      66654

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=2.1e-29  Score=253.87  Aligned_cols=183  Identities=17%  Similarity=0.282  Sum_probs=142.1

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeecccCCCcEEEccCCcEEEEecCCcc
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK--------GILVLNLKPFNFILNEADRAVLGDVGIPH   71 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~--------gIvHrDLKP~NILld~~~~vKL~DFGla~   71 (503)
                      |||++| +|.+++..   ..+++.+++.++.|++.||+|||++        ||+||||||+|||++.++.+||+|||++.
T Consensus       114 ~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~  190 (337)
T 3mdy_A          114 TDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  190 (337)
T ss_dssp             ECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             EeccCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCce
Confidence            799985 99999953   4699999999999999999999999        99999999999999999999999999997


Q ss_pred             cccCCCCC-CCCCCCccCCCCCCCccccCCCCCCCCCC------ccchHHHHHHHHHHHhC----------CCCCCCCC-
Q 010713           72 LLLGIPLP-SSDLPRRLGTPNYMAPEQWQPEVRGPISF------ETDSWGFACSIIEMLTG----------VQPRCGRS-  133 (503)
Q Consensus        72 ~~~~~~~~-~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~------ksDIwSLGviLyeLltG----------~~Pf~~~~-  133 (503)
                      ........ ........||+.|+|||++.+.   ....      ++|||||||++|+|++|          ..||.... 
T Consensus       191 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~  267 (337)
T 3mdy_A          191 KFISDTNEVDIPPNTRVGTKRYMPPEVLDES---LNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVP  267 (337)
T ss_dssp             ECC---------CCSSCSCGGGCCHHHHTTC---CCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSC
T ss_pred             eeccccccccCCCCCCccCcceeChhhcccc---cCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcC
Confidence            65432211 1112356799999999999754   2333      38999999999999999          77775432 


Q ss_pred             ----hHHHHHHHHhccCCCCCCC-----CCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          134 ----VDEIYDAVVRRQEIPPIPS-----GLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       134 ----~~e~~~~i~~~~~~~~~~~-----~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                          .......+......+.++.     .+++.+.+||.+||+.||.+|||+.++++.|+.+...
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~  332 (337)
T 3mdy_A          268 SDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES  332 (337)
T ss_dssp             SSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             CCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence                2223333323333333432     4667899999999999999999999999999988654

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.96  E-value=1.3e-29  Score=262.19  Aligned_cols=178  Identities=20%  Similarity=0.247  Sum_probs=136.6

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++++|.+++.   ...+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....     
T Consensus       113 ~e~~~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~-----  184 (367)
T 2fst_X          113 THLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD-----  184 (367)
T ss_dssp             EECCCEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC--------------
T ss_pred             ecccCCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccccccccc-----
Confidence            5788889999885   36799999999999999999999999999999999999999999999999999876532     


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------  148 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~------------  148 (503)
                       ......+|+.|+|||++.+.  ..++.++|||||||++|+|++|+.||.+.+..+....+......+            
T Consensus       185 -~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~  261 (367)
T 2fst_X          185 -EMTGYVATRWYRAPEIMLNW--MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES  261 (367)
T ss_dssp             -------CCCTTCCHHHHTTC--CSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHH
T ss_pred             -cCCCcCcCcCccChHHHcCC--cCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHH
Confidence             23456889999999998752  368899999999999999999999999988777666655422111            


Q ss_pred             ---------C--------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCC
Q 010713          149 ---------P--------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGG  195 (503)
Q Consensus       149 ---------~--------~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~  195 (503)
                               .        ....+++.+.+||.+||..||.+|||+.++++      |+|+....
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~------hp~~~~~~  319 (367)
T 2fst_X          262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA------HAYFAQYH  319 (367)
T ss_dssp             HHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT------SGGGTTTC
T ss_pred             HHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc------Chhhhhcc
Confidence                     0        11356889999999999999999999999998      88887543

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.96  E-value=2.7e-29  Score=252.21  Aligned_cols=182  Identities=20%  Similarity=0.340  Sum_probs=140.9

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++..  ...+++.+++.++.||+.||+|||++||+|+||||+||+++.++.+||+|||++.......  
T Consensus       113 ~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~--  188 (309)
T 2h34_A          113 MRLINGVDLAAMLRR--QGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEK--  188 (309)
T ss_dssp             EECCCCEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC----------
T ss_pred             EEecCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccc--
Confidence            689986 99999974  4679999999999999999999999999999999999999999999999999987654321  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC-CCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-PPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~-~~~~~~~s~~l  158 (503)
                      ........+++.|+|||++.+.   .++.++||||||+++|+|++|..||.+.........+...... ...+..+++.+
T Consensus       189 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  265 (309)
T 2h34_A          189 LTQLGNTVGTLYYMAPERFSES---HATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAF  265 (309)
T ss_dssp             --------CCGGGCCGGGTCC-------CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHH
T ss_pred             cccccccCCCcCccCHHHHcCC---CCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCCCHHH
Confidence            1222355789999999999744   6788999999999999999999999887665444433322211 23457789999


Q ss_pred             HHHHHHhhhcCCCCCC-CHHHHHHHHHhhccC
Q 010713          159 ENVLLGCFEYDLRSRP-LMTDILRVFKSSQNS  189 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RP-S~~elL~~L~~i~~~  189 (503)
                      .++|.+||+.||++|| ++.++++.|+.....
T Consensus       266 ~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~  297 (309)
T 2h34_A          266 DAVIARGMAKNPEDRYVTCGDLSAAAHAALAT  297 (309)
T ss_dssp             HHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred             HHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence            9999999999999999 999999999877543

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.96  E-value=2.1e-29  Score=257.67  Aligned_cols=178  Identities=17%  Similarity=0.237  Sum_probs=141.6

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecccCCCcEEEcc------CCcEEEEecCCcccc
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNE------ADRAVLGDVGIPHLL   73 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~-gIvHrDLKP~NILld~------~~~vKL~DFGla~~~   73 (503)
                      |||++++|.+++.......+++.+++.++.||+.||+|||++ ||+||||||+|||++.      .+.+||+|||++...
T Consensus       109 ~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~  188 (373)
T 1q8y_A          109 FEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY  188 (373)
T ss_dssp             ECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEET
T ss_pred             EecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEccccccccc
Confidence            689988999999876667799999999999999999999998 9999999999999953      347999999999765


Q ss_pred             cCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHhccC-
Q 010713           74 LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS------VDEIYDAVVRRQE-  146 (503)
Q Consensus        74 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~------~~e~~~~i~~~~~-  146 (503)
                      ..      ......||+.|+|||++.+.   .++.++|||||||++|+|++|..||....      ..+....+..... 
T Consensus       189 ~~------~~~~~~~t~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  259 (373)
T 1q8y_A          189 DE------HYTNSIQTREYRSPEVLLGA---PWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGE  259 (373)
T ss_dssp             TB------CCCSCCSCGGGCCHHHHHTC---CCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCS
T ss_pred             CC------CCCCCCCCccccCcHHHhCC---CCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCC
Confidence            32      23455789999999999754   68899999999999999999999998654      2222222221110 


Q ss_pred             ---------------------------------------CCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhc
Q 010713          147 ---------------------------------------IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQ  187 (503)
Q Consensus       147 ---------------------------------------~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~  187 (503)
                                                             ...++..+++++.+||.+||+.||++|||+.|+++      
T Consensus       260 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~------  333 (373)
T 1q8y_A          260 LPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN------  333 (373)
T ss_dssp             CCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT------
T ss_pred             CCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhh------
Confidence                                                   11233445678999999999999999999999998      


Q ss_pred             cCcCCC
Q 010713          188 NSVHSD  193 (503)
Q Consensus       188 ~~~~~~  193 (503)
                      ++|+..
T Consensus       334 hp~f~~  339 (373)
T 1q8y_A          334 HPWLKD  339 (373)
T ss_dssp             CGGGTT
T ss_pred             Chhhhc
Confidence            888765

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.96  E-value=3.2e-29  Score=268.63  Aligned_cols=171  Identities=22%  Similarity=0.368  Sum_probs=148.1

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC---CcEEEEecCCcccccCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA---DRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~---~~vKL~DFGla~~~~~~   76 (503)
                      ||||+| +|.+.+..  ...+++.++..++.||+.||+|||++||+||||||+|||++..   +.+||+|||++..... 
T Consensus       115 ~e~~~~g~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~-  191 (494)
T 3lij_A          115 MECYKGGELFDEIIH--RMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN-  191 (494)
T ss_dssp             EECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT-
T ss_pred             EecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC-
Confidence            799985 99998874  4679999999999999999999999999999999999999764   4599999999977643 


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCC--CCC
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGL  154 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~--~~~  154 (503)
                         ........||+.|+|||++.+    .++.++|||||||++|+|++|..||.+....++...+.........+  ..+
T Consensus       192 ---~~~~~~~~gt~~y~aPE~l~~----~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  264 (494)
T 3lij_A          192 ---QKKMKERLGTAYYIAPEVLRK----KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNV  264 (494)
T ss_dssp             ---TBCBCCCCSCTTTCCHHHHTT----CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTS
T ss_pred             ---CccccccCCCcCeeCHHHHcc----cCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccC
Confidence               223345679999999999863    58899999999999999999999999999988888887655443322  578


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ++.+.+||.+||+.||.+|||+.++++
T Consensus       265 s~~~~~li~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          265 SEGAKDLIKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CHHHHHHHHHHCCCChhhCccHHHHhc
Confidence            999999999999999999999999997

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.96  E-value=3e-29  Score=245.90  Aligned_cols=174  Identities=16%  Similarity=0.250  Sum_probs=141.9

Q ss_pred             CcCCCC-CHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC------------------
Q 010713            1 MKFYEG-SVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA------------------   59 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~--~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~------------------   59 (503)
                      |||++| +|.+++....  ...+++.+++.++.||+.||+|||++||+||||||+||+++.+                  
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~  169 (289)
T 1x8b_A           90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN  169 (289)
T ss_dssp             EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------
T ss_pred             EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCC
Confidence            799985 9999997642  3679999999999999999999999999999999999999844                  


Q ss_pred             -CcEEEEecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHH
Q 010713           60 -DRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIY  138 (503)
Q Consensus        60 -~~vKL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~  138 (503)
                       ..++|+|||++.....       .....||+.|+|||++.+.  ..++.++|||||||++|+|++|.+++.....   .
T Consensus       170 ~~~~kl~Dfg~~~~~~~-------~~~~~gt~~y~aPE~~~~~--~~~~~~~Di~slG~il~~l~~~~~~~~~~~~---~  237 (289)
T 1x8b_A          170 KVMFKIGDLGHVTRISS-------PQVEEGDSRFLANEVLQEN--YTHLPKADIFALALTVVCAAGAEPLPRNGDQ---W  237 (289)
T ss_dssp             CCCEEECCCTTCEETTC-------SCCCCCCGGGCCHHHHTTC--CTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH---H
T ss_pred             ceEEEEcccccccccCC-------ccccCCCccccChhHhcCC--CCCCchhhHHHHHHHHHHHhcCCCCCcchhH---H
Confidence             4799999999877533       1234589999999999743  2456799999999999999999887754432   2


Q ss_pred             HHHHhccCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          139 DAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       139 ~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      ..+. ....+.++..+++.+.++|.+||+.||++|||+.++++      ++|+..
T Consensus       238 ~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~------h~~~~~  285 (289)
T 1x8b_A          238 HEIR-QGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK------HSVLLS  285 (289)
T ss_dssp             HHHH-TTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT------CTTC--
T ss_pred             HHHH-cCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh------ChHhhh
Confidence            2332 33455677889999999999999999999999999998      777654

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.96  E-value=2.3e-29  Score=256.70  Aligned_cols=171  Identities=16%  Similarity=0.144  Sum_probs=143.3

Q ss_pred             CcCCC-C-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCC
Q 010713            1 MKFYE-G-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~-G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~   78 (503)
                      |||+. | +|.+++.  ....+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....   
T Consensus       108 ~e~~~~g~~l~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~---  182 (335)
T 3dls_A          108 MEKHGSGLDLFAFID--RHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLER---  182 (335)
T ss_dssp             EECCTTSCBHHHHHH--TCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCT---
T ss_pred             EEeCCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCC---
Confidence            68885 5 8999986  556799999999999999999999999999999999999999999999999999977643   


Q ss_pred             CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           79 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        79 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                       ........||+.|+|||++.+..  .++.++|||||||++|+|++|..||.....      .  .......+..+++++
T Consensus       183 -~~~~~~~~gt~~y~aPE~~~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~------~--~~~~~~~~~~~~~~l  251 (335)
T 3dls_A          183 -GKLFYTFCGTIEYCAPEVLMGNP--YRGPELEMWSLGVTLYTLVFEENPFCELEE------T--VEAAIHPPYLVSKEL  251 (335)
T ss_dssp             -TCCBCEECSCGGGCCHHHHTTCC--BCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------G--TTTCCCCSSCCCHHH
T ss_pred             -CCceeccCCCccccChhhhcCCC--CCCCcccchhHHHHHHHHHhCCCchhhHHH------H--HhhccCCCcccCHHH
Confidence             22234567999999999997541  237889999999999999999999976322      1  112334556789999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      .+||.+||+.||++|||+.++++      ++|+..
T Consensus       252 ~~li~~~L~~dP~~Rps~~ell~------hp~~~~  280 (335)
T 3dls_A          252 MSLVSGLLQPVPERRTTLEKLVT------DPWVTQ  280 (335)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHH------CTTTTC
T ss_pred             HHHHHHHccCChhhCcCHHHHhc------CccccC
Confidence            99999999999999999999999      887653

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.96  E-value=5e-29  Score=254.54  Aligned_cols=177  Identities=21%  Similarity=0.272  Sum_probs=144.7

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++|+|.+++.    ..+++.++..++.||+.||+|||++||+||||||+||+++.++.+||+|||++.....     
T Consensus       108 ~e~~~~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~-----  178 (353)
T 3coi_A          108 MPFMQTDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA-----  178 (353)
T ss_dssp             EECCSEEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC--------
T ss_pred             eccccCCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCC-----
Confidence            6899998887763    3599999999999999999999999999999999999999999999999999876432     


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccC--------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE--------------  146 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~--------------  146 (503)
                       ......+|+.|+|||++.+.  ..++.++|||||||++|+|++|..||.+.+..+....+.....              
T Consensus       179 -~~~~~~~t~~y~aPE~~~~~--~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  255 (353)
T 3coi_A          179 -EMTGYVVTRWYRAPEVILSW--MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKA  255 (353)
T ss_dssp             ------CCSBCCSCHHHHSCC--SCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHH
T ss_pred             -CccccccCcCcCCHHHHhCc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHH
Confidence             23355789999999998752  3578999999999999999999999998887666555543211              


Q ss_pred             ---------------CCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCC
Q 010713          147 ---------------IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGG  195 (503)
Q Consensus       147 ---------------~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~  195 (503)
                                     .......+++.+.+||.+||+.||++|||+.++++      ++|+....
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~------hp~f~~~~  313 (353)
T 3coi_A          256 AKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT------HPFFEPFR  313 (353)
T ss_dssp             HHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT------SGGGTTTC
T ss_pred             HHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc------Ccchhhcc
Confidence                           11233567999999999999999999999999998      88886543

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.96  E-value=5.2e-29  Score=248.29  Aligned_cols=171  Identities=21%  Similarity=0.369  Sum_probs=148.3

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.   .+.+++.+++.++.||+.||+|||++||+|+||||+||+++.++.++|+|||++.......  
T Consensus        99 ~e~~~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~--  173 (303)
T 3a7i_A           99 MEYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--  173 (303)
T ss_dssp             EECCTTEEHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB--
T ss_pred             EEeCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCccc--
Confidence            789986 9999884   4679999999999999999999999999999999999999999999999999997754321  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                       .......|++.|+|||++.+.   .++.++||||||+++|+|++|..||......+....+.. ...+..+..++..+.
T Consensus       174 -~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~  248 (303)
T 3a7i_A          174 -IKRNTFVGTPFWMAPEVIKQS---AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK-NNPPTLEGNYSKPLK  248 (303)
T ss_dssp             -CCBCCCCSCGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH-SCCCCCCSSCCHHHH
T ss_pred             -cccCccCCCcCccCHHHHhcC---CCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhc-CCCCCCccccCHHHH
Confidence             223456789999999999754   678899999999999999999999998877776655543 345566788999999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 010713          160 NVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +||.+||+.||.+|||+.++++
T Consensus       249 ~li~~~l~~dp~~Rps~~~ll~  270 (303)
T 3a7i_A          249 EFVEACLNKEPSFRPTAKELLK  270 (303)
T ss_dssp             HHHHHHCCSSGGGSCCHHHHTT
T ss_pred             HHHHHHcCCChhhCcCHHHHhh
Confidence            9999999999999999999988

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.96  E-value=4.2e-29  Score=249.84  Aligned_cols=182  Identities=20%  Similarity=0.254  Sum_probs=151.2

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.. ....+++.+++.++.||+.||+|||++||+|+||||+||+++.++.++|+|||++......   
T Consensus       103 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~---  178 (314)
T 3com_A          103 MEYCGAGSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT---  178 (314)
T ss_dssp             EECCTTEEHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTT---
T ss_pred             eecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhh---
Confidence            789986 99999864 4677999999999999999999999999999999999999999999999999999765432   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccC-CCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~-~~~~~~~~s~~l  158 (503)
                      ........|++.|+|||.+.+.   .++.++||||||+++|+|++|..||...........+..... ....+..++..+
T Consensus       179 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  255 (314)
T 3com_A          179 MAKRNTVIGTPFWMAPEVIQEI---GYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNF  255 (314)
T ss_dssp             BSCBCCCCSCGGGCCHHHHSSS---CBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHH
T ss_pred             ccccCccCCCCCccChhhcCCC---CCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHH
Confidence            1223355789999999999754   578999999999999999999999998777665554443221 222345688999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCC
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGG  195 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~  195 (503)
                      .+||.+||+.||.+|||+.++++      ++|+....
T Consensus       256 ~~li~~~l~~dp~~Rpt~~~ll~------~~~~~~~~  286 (314)
T 3com_A          256 TDFVKQCLVKSPEQRATATQLLQ------HPFVRSAK  286 (314)
T ss_dssp             HHHHHHHTCSCTTTSCCHHHHTT------SHHHHTCC
T ss_pred             HHHHHHHccCChhhCcCHHHHHh------CHHHhcCC
Confidence            99999999999999999999988      66665443

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.96  E-value=1.1e-29  Score=271.01  Aligned_cols=171  Identities=21%  Similarity=0.336  Sum_probs=149.0

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEE---ccCCcEEEEecCCcccccCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL---NEADRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILl---d~~~~vKL~DFGla~~~~~~   76 (503)
                      ||||. |+|.+.+.  ....+++.++..++.||+.||+|||++||+||||||+|||+   +.++.+||+|||++..... 
T Consensus       105 ~e~~~~~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~-  181 (484)
T 3nyv_A          105 GEVYTGGELFDEII--SRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-  181 (484)
T ss_dssp             ECCCCSCBHHHHHH--TCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC-
T ss_pred             EecCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc-
Confidence            68998 59999986  56779999999999999999999999999999999999999   4678999999999976643 


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCC--CCC
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGL  154 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~--~~~  154 (503)
                         ........||+.|+|||++.+    .++.++|||||||++|+|++|..||.+.+..+....+.........+  ..+
T Consensus       182 ---~~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  254 (484)
T 3nyv_A          182 ---SKKMKDKIGTAYYIAPEVLHG----TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKV  254 (484)
T ss_dssp             ---CCSHHHHTTGGGTCCHHHHHT----CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGS
T ss_pred             ---ccccccCCCCccccCceeecC----CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccC
Confidence               222334579999999999864    58899999999999999999999999999988888887765444333  568


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ++.+.+||.+||+.||.+|||+.++++
T Consensus       255 s~~~~~li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          255 SESAKDLIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence            999999999999999999999999998

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.96  E-value=1.9e-29  Score=247.16  Aligned_cols=182  Identities=21%  Similarity=0.267  Sum_probs=146.4

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.  ....+++.++..++.||+.||+|||++||+|+||||+||+++.++.++|+|||++....... .
T Consensus        84 ~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-~  160 (276)
T 2yex_A           84 LEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-R  160 (276)
T ss_dssp             EECCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETT-E
T ss_pred             EEecCCCcHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCc-c
Confidence            689986 9998885  45679999999999999999999999999999999999999999999999999987653211 1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD-EIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........|++.|+|||.+.+..  .++.++|+||||+++|+|++|..||...... ..+...............+++.+
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (276)
T 2yex_A          161 ERLLNKMCGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP  238 (276)
T ss_dssp             ECCBCCCCSCGGGCCGGGGTCSS--BCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHH
T ss_pred             hhcccCCccccCccChHHHhcCC--CCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHH
Confidence            12234567899999999997531  2467899999999999999999999876543 23333333322233345789999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      .+||.+||+.||.+|||+.++++      ++|+..
T Consensus       239 ~~li~~~l~~~p~~Rps~~~il~------~~~~~~  267 (276)
T 2yex_A          239 LALLHKILVENPSARITIPDIKK------DRWYNK  267 (276)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHTT------CTTTTC
T ss_pred             HHHHHHHCCCCchhCCCHHHHhc------CccccC
Confidence            99999999999999999999988      777654

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.96  E-value=4e-29  Score=246.02  Aligned_cols=172  Identities=24%  Similarity=0.371  Sum_probs=143.7

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC----cEEEEecCCcccccC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD----RAVLGDVGIPHLLLG   75 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~----~vKL~DFGla~~~~~   75 (503)
                      |||++ ++|.+++..  ...+++.+++.++.||+.||+|||++||+|+||||+||+++.++    .++|+|||++.....
T Consensus        87 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~  164 (283)
T 3bhy_A           87 LELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA  164 (283)
T ss_dssp             EECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC-
T ss_pred             EeecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccC
Confidence            78997 599999974  46799999999999999999999999999999999999998877    899999999976543


Q ss_pred             CCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC--CCCC
Q 010713           76 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--IPSG  153 (503)
Q Consensus        76 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~--~~~~  153 (503)
                          ........+++.|+|||++.+.   .++.++|+||||+++|+|++|..||.+....+....+........  ....
T Consensus       165 ----~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (283)
T 3bhy_A          165 ----GNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSN  237 (283)
T ss_dssp             -----------CCCGGGCCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTT
T ss_pred             ----CCcccccCCCcCccCcceecCC---CCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhccc
Confidence                1223345789999999999744   688999999999999999999999999888777776654332221  2257


Q ss_pred             CcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          154 LPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       154 ~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +++.+.+||.+||+.||.+||++.++++
T Consensus       238 ~~~~~~~li~~~l~~dp~~Rps~~~~l~  265 (283)
T 3bhy_A          238 TSELAKDFIRRLLVKDPKRRMTIAQSLE  265 (283)
T ss_dssp             CCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence            8899999999999999999999999998

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.96  E-value=1.6e-29  Score=255.55  Aligned_cols=185  Identities=17%  Similarity=0.323  Sum_probs=148.8

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.. ....+++.+++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++.........
T Consensus       123 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~  201 (326)
T 2w1i_A          123 MEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEY  201 (326)
T ss_dssp             ECCCTTCBHHHHHHH-STTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSE
T ss_pred             EECCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhccccccc
Confidence            789985 99999975 3456999999999999999999999999999999999999999999999999999876432211


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChH------------H---HHHHHHhc
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD------------E---IYDAVVRR  144 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~------------e---~~~~i~~~  144 (503)
                      ........++..|+|||.+.+.   .++.++||||||+++|+|++|..||......            .   ........
T Consensus       202 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (326)
T 2w1i_A          202 YKVKEPGESPIFWYAPESLTES---KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN  278 (326)
T ss_dssp             EECSSCCSCCGGGCCHHHHHHC---EEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred             cccccCCCCceeEECchhhcCC---CCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhc
Confidence            1112334567789999998743   5788999999999999999999987642110            0   11122233


Q ss_pred             cCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       145 ~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      ....+.+..+++++.++|.+||+.||++|||+.++++.|+.+...
T Consensus       279 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~  323 (326)
T 2w1i_A          279 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ  323 (326)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            345566788999999999999999999999999999999987643

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.96  E-value=1.8e-29  Score=251.76  Aligned_cols=183  Identities=23%  Similarity=0.320  Sum_probs=144.3

Q ss_pred             CcCCC-CCHHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCC
Q 010713            1 MKFYE-GSVGDRMAQLK-GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~-~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~   78 (503)
                      |||++ |+|.+++.... ...+++..++.++.||+.||+|||++||+||||||+||+++.++.++|+|||++........
T Consensus       109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~  188 (307)
T 2nru_A          109 YVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ  188 (307)
T ss_dssp             EECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSS
T ss_pred             EEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeecccccccccccc
Confidence            68997 59999997543 45799999999999999999999999999999999999999999999999999876543211


Q ss_pred             CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHhc---------c
Q 010713           79 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE----IYDAVVRR---------Q  145 (503)
Q Consensus        79 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e----~~~~i~~~---------~  145 (503)
                       ........||+.|+|||.+.+    .++.++||||||+++|+|++|..||......+    +...+...         .
T Consensus       189 -~~~~~~~~g~~~y~aPE~~~~----~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (307)
T 2nru_A          189 -TVMTSRIVGTTAYMAPEALRG----EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDK  263 (307)
T ss_dssp             -CEECSSCCSCGGGCCHHHHTT----EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCS
T ss_pred             -cccccccCCCcCcCChHHhcC----CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccc
Confidence             111234578999999999864    47889999999999999999999998654322    11111110         0


Q ss_pred             CCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          146 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       146 ~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      .....+..++..+.+++.+||+.||.+|||+.++++.|+++..
T Consensus       264 ~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~  306 (307)
T 2nru_A          264 KMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA  306 (307)
T ss_dssp             SCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred             cccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence            1112233456789999999999999999999999999998753

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.96  E-value=3.3e-29  Score=248.41  Aligned_cols=188  Identities=23%  Similarity=0.348  Sum_probs=144.2

Q ss_pred             CcCCC-CCHHHHHHhh------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccc
Q 010713            1 MKFYE-GSVGDRMAQL------KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL   73 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~------~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~   73 (503)
                      |||++ |+|.+++...      ....+++.+++.++.||+.||+|||++||+|+||||+||+++.++.++|+|||++...
T Consensus        92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  171 (303)
T 2vwi_A           92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFL  171 (303)
T ss_dssp             EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHC
T ss_pred             ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchhee
Confidence            78997 5999999753      2456999999999999999999999999999999999999999999999999998765


Q ss_pred             cCCCC--CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC----
Q 010713           74 LGIPL--PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI----  147 (503)
Q Consensus        74 ~~~~~--~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~----  147 (503)
                      .....  .........||+.|+|||++.+.  ..++.++||||||+++|+|++|..||..................    
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  249 (303)
T 2vwi_A          172 ATGGDITRNKVRKTFVGTPCWMAPEVMEQV--RGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET  249 (303)
T ss_dssp             C---------------CCCTTCCHHHHHHH--HCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC
T ss_pred             ccCCCccchhhhcccCCCccccCHHHhccc--cCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcccc
Confidence            33211  11122345789999999998631  24788999999999999999999999887766655444432211    


Q ss_pred             ----CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCC
Q 010713          148 ----PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGW  196 (503)
Q Consensus       148 ----~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w  196 (503)
                          ......+++.+.++|.+||+.||.+||++.++++      ++|+....+
T Consensus       250 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~------h~~~~~~~~  296 (303)
T 2vwi_A          250 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR------HKFFQKAKN  296 (303)
T ss_dssp             -----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT------STTC-----
T ss_pred             ccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh------ChhhhcCCC
Confidence                1233568899999999999999999999999998      888765443

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.96  E-value=4.1e-29  Score=268.47  Aligned_cols=171  Identities=22%  Similarity=0.369  Sum_probs=148.8

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC---cEEEEecCCcccccCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD---RAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~---~vKL~DFGla~~~~~~   76 (503)
                      ||||+| +|.+++..  ...+++.+++.++.||+.||+|||++||+||||||+|||++.++   .+||+|||++..... 
T Consensus       125 ~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~-  201 (504)
T 3q5i_A          125 TEFYEGGELFEQIIN--RHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK-  201 (504)
T ss_dssp             EECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCT-
T ss_pred             EecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCC-
Confidence            799985 99999974  46799999999999999999999999999999999999998776   699999999987643 


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCC--CCC
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGL  154 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~--~~~  154 (503)
                         ........||+.|+|||++.+    .++.++|||||||++|+|++|..||.+.+..++...+.......+.+  ..+
T Consensus       202 ---~~~~~~~~gt~~y~aPE~~~~----~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  274 (504)
T 3q5i_A          202 ---DYKLRDRLGTAYYIAPEVLKK----KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNI  274 (504)
T ss_dssp             ---TSCBCCCCSCTTTCCHHHHTT----CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTS
T ss_pred             ---CCccccccCCcCCCCHHHhcc----CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCCC
Confidence               223345679999999999863    58899999999999999999999999999988888887654333222  678


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ++++.+||.+||+.||.+|||+.++++
T Consensus       275 s~~~~~li~~~L~~dp~~R~t~~e~l~  301 (504)
T 3q5i_A          275 SDEAKELIKLMLTYDYNKRCTAEEALN  301 (504)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            999999999999999999999999998

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.96  E-value=2.6e-29  Score=272.65  Aligned_cols=182  Identities=20%  Similarity=0.309  Sum_probs=155.5

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.......+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||++.......  
T Consensus       340 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~--  417 (535)
T 2h8h_A          340 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE--  417 (535)
T ss_dssp             ECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH--
T ss_pred             eehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc--
Confidence            799985 99999976555679999999999999999999999999999999999999999999999999997653211  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........++..|+|||++..   ..++.++|||||||+||||++ |..||.+....+....+.. ....+.+..++..+
T Consensus       418 ~~~~~~~~~~~~y~aPE~~~~---~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~-~~~~~~~~~~~~~l  493 (535)
T 2h8h_A          418 YTARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER-GYRMPCPPECPESL  493 (535)
T ss_dssp             HHTTCSTTSCGGGSCHHHHHH---CCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHT-TCCCCCCTTCCHHH
T ss_pred             eecccCCcCcccccCHHHhcc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCCCCCCCCCCHHH
Confidence            011223456788999999874   368999999999999999999 9999999888888777654 34556678899999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      .+||.+||+.||++|||+.+|++.|+.+..
T Consensus       494 ~~li~~cl~~dP~~RPt~~~l~~~L~~~~~  523 (535)
T 2h8h_A          494 HDLMCQCWRKEPEERPTFEYLQAFLEDYFT  523 (535)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred             HHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence            999999999999999999999999987654

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.96  E-value=1.5e-29  Score=258.75  Aligned_cols=179  Identities=21%  Similarity=0.332  Sum_probs=144.0

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecccCCCcEEEccCCcEEEEecCCcccccCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~-gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~   78 (503)
                      |||++| +|.+++..  .+.+++..+..++.|++.||+|||++ ||+||||||+||+++.++.++|+|||++.....   
T Consensus       110 ~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~---  184 (360)
T 3eqc_A          110 MEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---  184 (360)
T ss_dssp             ECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH---
T ss_pred             EECCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCccccc---
Confidence            799985 99999974  45799999999999999999999996 999999999999999999999999999865432   


Q ss_pred             CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHH-------------------
Q 010713           79 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYD-------------------  139 (503)
Q Consensus        79 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~-------------------  139 (503)
                        .......||+.|+|||++.+.   .++.++|||||||++|+|++|..||......+...                   
T Consensus       185 --~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (360)
T 3eqc_A          185 --SMANSFVGTRSYMSPERLQGT---HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRT  259 (360)
T ss_dssp             --HC----CCCCTTCCHHHHTTC---CCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC----------------
T ss_pred             --ccccCCCCCCCeECHHHHcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCccc
Confidence              122345789999999999854   68899999999999999999999998766544322                   


Q ss_pred             -----------------------HHHhccCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCC
Q 010713          140 -----------------------AVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGG  195 (503)
Q Consensus       140 -----------------------~i~~~~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~  195 (503)
                                             .+............++.++.+||.+||+.||++|||+.++++      |+|+....
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~------hp~~~~~~  332 (360)
T 3eqc_A          260 PGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV------HAFIKRSD  332 (360)
T ss_dssp             --------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT------SHHHHHHH
T ss_pred             CCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh------ChHhhcch
Confidence                                   222222222223457899999999999999999999999998      66665433

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.96  E-value=9.5e-29  Score=249.00  Aligned_cols=179  Identities=15%  Similarity=0.217  Sum_probs=141.5

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC-cEEEEecCCcccccCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD-RAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~-~vKL~DFGla~~~~~~~~   78 (503)
                      |||++| +|.+++.     .+++.++..++.||+.||+|||++||+||||||+|||++.++ .+||+|||++.....   
T Consensus       112 ~e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~---  183 (330)
T 3nsz_A          112 FEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP---  183 (330)
T ss_dssp             EECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCT---
T ss_pred             EeccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC---
Confidence            689985 8888774     389999999999999999999999999999999999999776 899999999976543   


Q ss_pred             CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHh-------------c
Q 010713           79 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR-SVDEIYDAVVR-------------R  144 (503)
Q Consensus        79 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~-~~~e~~~~i~~-------------~  144 (503)
                       ........+++.|+|||++.+.  ..++.++|||||||++|+|++|..||... ...+....+..             .
T Consensus       184 -~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  260 (330)
T 3nsz_A          184 -GQEYNVRVASRYFKGPELLVDY--QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY  260 (330)
T ss_dssp             -TCCCCSCCSCGGGCCHHHHTTC--CCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred             -CCccccccccccccChhhhcCC--CcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHh
Confidence             2233456789999999998742  36889999999999999999999998543 22222222111             0


Q ss_pred             cC----------------------CCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCC
Q 010713          145 QE----------------------IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGW  196 (503)
Q Consensus       145 ~~----------------------~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w  196 (503)
                      ..                      ....+..+++++.+||.+||+.||.+|||+.|+++      |+|+....+
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~------hp~f~~~~~  328 (330)
T 3nsz_A          261 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME------HPYFYTVVK  328 (330)
T ss_dssp             TCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT------SGGGTTCC-
T ss_pred             ccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc------CccHhhhcc
Confidence            00                      00112237899999999999999999999999999      899887654

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.96  E-value=1.8e-29  Score=248.01  Aligned_cols=174  Identities=24%  Similarity=0.385  Sum_probs=146.9

Q ss_pred             CcCCCC-CHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC-----CeecccCCCcEEEccCCcEEEEecCCccc
Q 010713            1 MKFYEG-SVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSKG-----ILVLNLKPFNFILNEADRAVLGDVGIPHL   72 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~--~~~Ls~~~vl~i~~QIl~aL~yLHs~g-----IvHrDLKP~NILld~~~~vKL~DFGla~~   72 (503)
                      |||++| +|.+++....  ...+++.+++.++.||+.||+|||+++     |+|+||||+||+++.++.+||+|||++..
T Consensus        86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~  165 (279)
T 2w5a_A           86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI  165 (279)
T ss_dssp             EECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHH
T ss_pred             EeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhee
Confidence            799986 9999997542  456999999999999999999999999     99999999999999999999999999876


Q ss_pred             ccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCC
Q 010713           73 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS  152 (503)
Q Consensus        73 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~  152 (503)
                      ....   ........|++.|+|||++.+.   .++.++||||||+++|+|++|..||...+..+....+... ..+.++.
T Consensus       166 ~~~~---~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~-~~~~~~~  238 (279)
T 2w5a_A          166 LNHD---TSFAKTFVGTPYYMSPEQMNRM---SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG-KFRRIPY  238 (279)
T ss_dssp             C------CHHHHHHHSCCTTCCHHHHHCC----CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT-CCCCCCT
T ss_pred             eccc---cccccccCCCccccChHHhccC---CCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhc-ccccCCc
Confidence            5321   1111234689999999999754   6789999999999999999999999998887777666553 3446677


Q ss_pred             CCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          153 GLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       153 ~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      .++.++.++|.+||+.||.+||++.++++
T Consensus       239 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~  267 (279)
T 2w5a_A          239 RYSDELNEIITRMLNLKDYHRPSVEEILE  267 (279)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ccCHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence            89999999999999999999999999998

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.96  E-value=1.3e-29  Score=253.94  Aligned_cols=189  Identities=23%  Similarity=0.326  Sum_probs=146.9

Q ss_pred             CcCCCC-CHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCC
Q 010713            1 MKFYEG-SVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~--~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~   77 (503)
                      |||++| +|.+++...  ....+++.+++.++.||+.||+|||++||+||||||+||+++.++.++|+|||++.......
T Consensus       109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~  188 (317)
T 2buj_A          109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHV  188 (317)
T ss_dssp             EECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEE
T ss_pred             EEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhccccc
Confidence            689985 999999764  35679999999999999999999999999999999999999999999999999886542100


Q ss_pred             CCC------CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHhccCCCC
Q 010713           78 LPS------SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS--VDEIYDAVVRRQEIPP  149 (503)
Q Consensus        78 ~~~------~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~--~~e~~~~i~~~~~~~~  149 (503)
                      ...      .......||+.|+|||++.+.....++.++||||||+++|+|++|..||....  ...... ........+
T Consensus       189 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~-~~~~~~~~~  267 (317)
T 2buj_A          189 EGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVAL-AVQNQLSIP  267 (317)
T ss_dssp             ESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHH-HHHCC--CC
T ss_pred             ccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhH-HhhccCCCC
Confidence            000      00012356899999999875433346889999999999999999999995311  111111 222233344


Q ss_pred             CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCc
Q 010713          150 IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSV  190 (503)
Q Consensus       150 ~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~  190 (503)
                      .+..+++.+.++|.+||+.||.+||++.++++.|+.+..+.
T Consensus       268 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~  308 (317)
T 2buj_A          268 QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA  308 (317)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCC
T ss_pred             ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCC
Confidence            45678999999999999999999999999999999876543

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.96  E-value=2.1e-29  Score=252.68  Aligned_cols=181  Identities=22%  Similarity=0.283  Sum_probs=138.8

Q ss_pred             CcCCCC-CHHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCC
Q 010713            1 MKFYEG-SVGDRMAQLK-GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~-~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~   78 (503)
                      ||||+| +|.+++.... ....++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++........
T Consensus       140 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~  219 (332)
T 3qd2_B          140 MQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEE  219 (332)
T ss_dssp             EECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--
T ss_pred             EEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchh
Confidence            799985 9999997532 23456678999999999999999999999999999999999999999999999987654221


Q ss_pred             C---------CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC
Q 010713           79 P---------SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP  149 (503)
Q Consensus        79 ~---------~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~  149 (503)
                      .         ........||+.|+|||++.+.   .++.++|||||||++|+|++|..|+..  .......+. ....+.
T Consensus       220 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~el~~~~~~~~~--~~~~~~~~~-~~~~~~  293 (332)
T 3qd2_B          220 EQTVLTPMPAYATHTGQVGTKLYMSPEQIHGN---NYSHKVDIFSLGLILFELLYSFSTQME--RVRIITDVR-NLKFPL  293 (332)
T ss_dssp             ------------CCCSCC-CGGGSCHHHHHCC---CCCTHHHHHHHHHHHHHHHSCCCCHHH--HHHHHHHHH-TTCCCH
T ss_pred             hccccccccccccccccCCCcCccChHHhcCC---CCcchhhHHHHHHHHHHHHHcCCChhH--HHHHHHHhh-ccCCCc
Confidence            1         1123456799999999999754   688999999999999999998776421  111222221 122222


Q ss_pred             CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          150 IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       150 ~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      .....++.+.+||.+||+.||.+|||+.|+++      ++|+.+
T Consensus       294 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~------~~~f~~  331 (332)
T 3qd2_B          294 LFTQKYPQEHMMVQDMLSPSPTERPEATDIIE------NAIFEN  331 (332)
T ss_dssp             HHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH------STTCCC
T ss_pred             ccccCChhHHHHHHHHccCCCCcCCCHHHHhh------chhhhc
Confidence            22455688899999999999999999999998      777754

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.96  E-value=4.3e-29  Score=252.12  Aligned_cols=183  Identities=19%  Similarity=0.319  Sum_probs=151.6

Q ss_pred             CcCCC-CCHHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC---CcEEEEecCCcc
Q 010713            1 MKFYE-GSVGDRMAQLKG-----GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA---DRAVLGDVGIPH   71 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~-----~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~---~~vKL~DFGla~   71 (503)
                      |||++ |+|.+++.....     ..+++.+++.++.||+.||+|||++||+||||||+||+++.+   ..++|+|||++.
T Consensus       112 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~  191 (327)
T 2yfx_A          112 MELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR  191 (327)
T ss_dssp             EECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHH
T ss_pred             EecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECcccccc
Confidence            78996 599999986432     459999999999999999999999999999999999999844   469999999987


Q ss_pred             cccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCC
Q 010713           72 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI  150 (503)
Q Consensus        72 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~  150 (503)
                      ....... ........+++.|+|||++.+.   .++.++|||||||++|+|++ |..||......+....+... ..+..
T Consensus       192 ~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~-~~~~~  266 (327)
T 2yfx_A          192 DIYRASY-YRKGGCAMLPVKWMPPEAFMEG---IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG-GRMDP  266 (327)
T ss_dssp             HHHC-------CCGGGSCGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT-CCCCC
T ss_pred             ccccccc-cccCCCcCCCcceeCHhHhcCC---CCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcC-CCCCC
Confidence            5433211 1222345678899999998743   68899999999999999998 99999988887777666543 34556


Q ss_pred             CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          151 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       151 ~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      +..+++.+.++|.+||+.||.+||++.++++.|+.+..
T Consensus       267 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~  304 (327)
T 2yfx_A          267 PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  304 (327)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence            77899999999999999999999999999999988754

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.96  E-value=9e-30  Score=256.56  Aligned_cols=184  Identities=20%  Similarity=0.311  Sum_probs=145.5

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCc---EEEEecCCcccccCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR---AVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~---vKL~DFGla~~~~~~   76 (503)
                      |||++| +|.+++.  ....+++.++..++.||+.||+|||++||+||||||+||+++.++.   +||+|||++..... 
T Consensus        93 ~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~-  169 (322)
T 2ycf_A           93 LELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-  169 (322)
T ss_dssp             EECCTTEETHHHHS--TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCC-
T ss_pred             EecCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceeccc-
Confidence            789985 9999886  4678999999999999999999999999999999999999987664   99999999876532 


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhccCC--CCCCCC
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD-EIYDAVVRRQEI--PPIPSG  153 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-e~~~~i~~~~~~--~~~~~~  153 (503)
                         ........||+.|+|||++.+.....++.++|||||||++|+|++|..||...... .....+......  +.....
T Consensus       170 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (322)
T 2ycf_A          170 ---TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAE  246 (322)
T ss_dssp             ---CHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTT
T ss_pred             ---ccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhh
Confidence               11112346899999999974322346889999999999999999999999765433 233333322211  112356


Q ss_pred             CcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCC
Q 010713          154 LPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGW  196 (503)
Q Consensus       154 ~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w  196 (503)
                      +++.+.+||.+||+.||.+||++.++++      ++|+...++
T Consensus       247 ~~~~~~~li~~~l~~dP~~Rps~~~~l~------h~~~~~~~~  283 (322)
T 2ycf_A          247 VSEKALDLVKKLLVVDPKARFTTEEALR------HPWLQDEDM  283 (322)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHHT------SGGGCCHHH
T ss_pred             cCHHHHHHHHHHcccCHhhCCCHHHHhh------CcCcCCHHH
Confidence            8999999999999999999999999988      777765443

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.96  E-value=2.7e-29  Score=249.61  Aligned_cols=186  Identities=21%  Similarity=0.268  Sum_probs=149.4

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.. ....+++.++..++.||+.||+|||++|++|+||||+||+++.++.++|+|||++......   
T Consensus        95 ~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---  170 (302)
T 2j7t_A           95 IEFCPGGAVDAIMLE-LDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT---  170 (302)
T ss_dssp             EECCTTEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH---
T ss_pred             EEeCCCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc---
Confidence            689986 88888864 4567999999999999999999999999999999999999999999999999987542110   


Q ss_pred             CCCCCCccCCCCCCCccccCCC--CCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC-CCCCCCCcH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPE--VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-PPIPSGLPP  156 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~--~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~-~~~~~~~s~  156 (503)
                      ........|++.|+|||++...  ....++.++||||||+++|+|++|..||...+.......+...... ...+..++.
T Consensus       171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (302)
T 2j7t_A          171 LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSV  250 (302)
T ss_dssp             HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCH
T ss_pred             ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccCH
Confidence            1112345789999999998310  1236789999999999999999999999988877776666554322 224567899


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCC
Q 010713          157 AVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGW  196 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w  196 (503)
                      .+.++|.+||+.||.+|||+.++++      ++|+....+
T Consensus       251 ~l~~li~~~l~~dp~~Rps~~~ll~------h~~~~~~~~  284 (302)
T 2j7t_A          251 EFRDFLKIALDKNPETRPSAAQLLE------HPFVSSITS  284 (302)
T ss_dssp             HHHHHHHHHSCSCTTTSCCHHHHTT------STTTTTCCC
T ss_pred             HHHHHHHHHcccChhhCCCHHHHhc------ChHHhhhcc
Confidence            9999999999999999999999988      888876554

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.96  E-value=9.6e-30  Score=256.24  Aligned_cols=184  Identities=18%  Similarity=0.267  Sum_probs=143.2

Q ss_pred             CcCCC-CCHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCC
Q 010713            1 MKFYE-GSVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~--~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~   77 (503)
                      |||++ |+|.+++....  ...+++.+++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++.......
T Consensus       114 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  193 (321)
T 2qkw_B          114 YKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELD  193 (321)
T ss_dssp             EECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSS
T ss_pred             EEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeeccccccccccc
Confidence            78998 59999886432  2369999999999999999999999999999999999999999999999999997643321


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHH---H---HHHhcc------
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIY---D---AVVRRQ------  145 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~---~---~i~~~~------  145 (503)
                      . ........||+.|+|||++.+.   .++.++|||||||++|+|++|+.||......+..   .   ......      
T Consensus       194 ~-~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (321)
T 2qkw_B          194 Q-THLSTVVKGTLGYIDPEYFIKG---RLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV  269 (321)
T ss_dssp             C-CCCBCCCEEETTTCCHHHHHHC---BCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSS
T ss_pred             c-cccccccCCCccccCHHHhcCC---CCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhc
Confidence            1 1122345689999999998743   6889999999999999999999999764332211   0   111100      


Q ss_pred             ---CCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          146 ---EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       146 ---~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                         ....++..++..+.+++.+||+.||++|||+.++++.|+.+..
T Consensus       270 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~  315 (321)
T 2qkw_B          270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR  315 (321)
T ss_dssp             SSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence               0111223345779999999999999999999999999998764

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.96  E-value=7.5e-29  Score=248.56  Aligned_cols=177  Identities=22%  Similarity=0.307  Sum_probs=139.7

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      ||+.+|+|.+++.  ....+++.+++.++.||+.||+|||++||+||||||+||+++ ++.+||+|||++....... ..
T Consensus       107 ~e~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~-~~  182 (313)
T 3cek_A          107 MECGNIDLNSWLK--KKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT-TS  182 (313)
T ss_dssp             ECCCSEEHHHHHH--HCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC--------
T ss_pred             EecCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeeccccccccCcc-cc
Confidence            6877789999997  456799999999999999999999999999999999999996 4899999999997654321 11


Q ss_pred             CCCCCccCCCCCCCccccCCC--------CCCCCCCccchHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHhccCCCCCC
Q 010713           81 SDLPRRLGTPNYMAPEQWQPE--------VRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVVRRQEIPPIP  151 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~--------~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~-~~e~~~~i~~~~~~~~~~  151 (503)
                      .......|++.|+|||++.+.        ....++.++||||||+++|+|++|..||.... .......+........++
T Consensus       183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  262 (313)
T 3cek_A          183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP  262 (313)
T ss_dssp             -------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCC
T ss_pred             ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCc
Confidence            122345789999999998742        11357889999999999999999999998754 333444454444555677


Q ss_pred             CCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          152 SGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       152 ~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ...+..+.++|.+||+.||.+||++.++++
T Consensus       263 ~~~~~~l~~li~~~l~~dp~~Rps~~ell~  292 (313)
T 3cek_A          263 DIPEKDLQDVLKCCLKRDPKQRISIPELLA  292 (313)
T ss_dssp             CCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence            788999999999999999999999999998

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.96  E-value=8.1e-29  Score=244.96  Aligned_cols=183  Identities=25%  Similarity=0.320  Sum_probs=146.9

Q ss_pred             CcCCC-CCHHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEcc-CCcEEEEecCCcccccCCC
Q 010713            1 MKFYE-GSVGDRMAQLK-GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE-ADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~-~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~-~~~vKL~DFGla~~~~~~~   77 (503)
                      |||++ |+|.+++.... ...+++..+..++.||+.||+|||++||+|+||||+||+++. ++.++|+|||++...... 
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~-  176 (295)
T 2clq_A           98 MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI-  176 (295)
T ss_dssp             EECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--
T ss_pred             EEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCC-
Confidence            68997 59999997642 235679999999999999999999999999999999999987 889999999999765431 


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhccCCCCCCCCCcH
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD-EIYDAVVRRQEIPPIPSGLPP  156 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-e~~~~i~~~~~~~~~~~~~s~  156 (503)
                        ........|++.|+|||++.+. ...++.++||||||+++|+|++|..||...... ............+.++..+++
T Consensus       177 --~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (295)
T 2clq_A          177 --NPCTETFTGTLQYMAPEIIDKG-PRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSA  253 (295)
T ss_dssp             ------CCCCCCGGGCCHHHHHHG-GGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCH
T ss_pred             --CCcccccCCCccccChhhhcCC-CCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCH
Confidence              1122355789999999998643 123788999999999999999999999764332 222233333455667888999


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          157 AVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      ++.++|.+||+.||++||++.++++      ++|+..
T Consensus       254 ~~~~li~~~l~~dp~~Rps~~~ll~------~~~~~~  284 (295)
T 2clq_A          254 EAKAFILKCFEPDPDKRACANDLLV------DEFLKV  284 (295)
T ss_dssp             HHHHHHHHTTCSSTTTSCCHHHHHT------SGGGCC
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhc------Chhhhh
Confidence            9999999999999999999999998      777654

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.96  E-value=1.8e-29  Score=255.60  Aligned_cols=181  Identities=21%  Similarity=0.295  Sum_probs=140.6

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||++|++.+.+.. ....+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++......   .
T Consensus       103 ~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~  178 (331)
T 4aaa_A          103 FEFVDHTILDDLEL-FPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP---G  178 (331)
T ss_dssp             EECCSEEHHHHHHH-STTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC----------
T ss_pred             EecCCcchHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCC---c
Confidence            79999754444432 4567999999999999999999999999999999999999999999999999999765331   2


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC-------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-------------  147 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~-------------  147 (503)
                      .......+|+.|+|||++.+.  ..++.++|||||||++|+|++|..||.+....+....+......             
T Consensus       179 ~~~~~~~~t~~y~aPE~~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (331)
T 4aaa_A          179 EVYDDEVATRWYRAPELLVGD--VKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNP  256 (331)
T ss_dssp             -----CCCCCTTCCHHHHTTC--TTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCG
T ss_pred             cccCCCcCCccccCcccccCC--CCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcc
Confidence            223456789999999999753  25789999999999999999999999988777665554432110             


Q ss_pred             -------CC---------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          148 -------PP---------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       148 -------~~---------~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                             +.         ....+++.+.+||.+||+.||.+|||+.|+++      ++|+..
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~------hp~f~~  312 (331)
T 4aaa_A          257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH------HDFFQM  312 (331)
T ss_dssp             GGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG------SHHHHG
T ss_pred             ccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc------Cchhcc
Confidence                   00         11357899999999999999999999999998      666554

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.96  E-value=4.8e-29  Score=246.96  Aligned_cols=171  Identities=20%  Similarity=0.340  Sum_probs=145.5

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC---CcEEEEecCCcccccCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA---DRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~---~~vKL~DFGla~~~~~~   76 (503)
                      |||++ ++|.+++..  ...+++.+++.++.||+.||+|||++||+|+||||+||+++.+   +.+||+|||++..... 
T Consensus       100 ~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~-  176 (287)
T 2wei_A          100 GELYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ-  176 (287)
T ss_dssp             ECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC-
T ss_pred             EEccCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecC-
Confidence            68997 599998864  4579999999999999999999999999999999999999764   4699999999876543 


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCC--CCC
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGL  154 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~--~~~  154 (503)
                         ........+++.|+|||.+.+    .++.++|+||||+++|+|++|..||.+.+..+....+.........+  ..+
T Consensus       177 ---~~~~~~~~~~~~y~aPE~~~~----~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (287)
T 2wei_A          177 ---NTKMKDRIGTAYYIAPEVLRG----TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTI  249 (287)
T ss_dssp             ---CSSCSCHHHHHTTCCHHHHTT----CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTS
T ss_pred             ---CCccccccCcccccChHHhcC----CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhc
Confidence               222334568899999999864    47889999999999999999999999988888777776654433333  578


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ++++.++|.+||+.||++|||+.++++
T Consensus       250 ~~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          250 SDDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHcccChhhCcCHHHHhc
Confidence            999999999999999999999999998

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.96  E-value=2.3e-29  Score=266.27  Aligned_cols=188  Identities=15%  Similarity=0.186  Sum_probs=139.0

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC-----CcEEEEecCCcccccC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA-----DRAVLGDVGIPHLLLG   75 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~-----~~vKL~DFGla~~~~~   75 (503)
                      ||||+|+|.+++.. ....+++.+++.++.||+.||+|||++||+||||||+|||++.+     ..+||+|||++.....
T Consensus        97 ~E~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~  175 (432)
T 3p23_A           97 IELCAATLQEYVEQ-KDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV  175 (432)
T ss_dssp             EECCSEEHHHHHHS-SSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred             EECCCCCHHHHHHh-cCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence            79999999999975 33456666788999999999999999999999999999999532     3688999999987643


Q ss_pred             CCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCC--CCC
Q 010713           76 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPP--IPS  152 (503)
Q Consensus        76 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~--~~~  152 (503)
                      ............||+.|+|||++.+.....++.++|||||||++|+|++ |..||.......... +........  ...
T Consensus       176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~  254 (432)
T 3p23_A          176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI-LLGACSLDCLHPEK  254 (432)
T ss_dssp             ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHH-HTTCCCCTTSCTTC
T ss_pred             CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHH-HhccCCccccCccc
Confidence            3222223345679999999999975434467889999999999999999 999997655444322 222111111  123


Q ss_pred             CCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCC
Q 010713          153 GLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGW  196 (503)
Q Consensus       153 ~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w  196 (503)
                      ..+..+.+||.+||+.||.+|||+.++++      |+|+....|
T Consensus       255 ~~~~~~~~li~~~L~~dP~~Rps~~evl~------hp~f~~~~~  292 (432)
T 3p23_A          255 HEDVIARELIEKMIAMDPQKRPSAKHVLK------HPFFWSLEK  292 (432)
T ss_dssp             HHHHHHHHHHHHHSCSSGGGSCCHHHHHT------STTTCCHHH
T ss_pred             cccHHHHHHHHHHHhCCHhhCCCHHHHHh------CccccChHH
Confidence            34566899999999999999999999998      888866544

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.96  E-value=2.5e-29  Score=256.15  Aligned_cols=178  Identities=21%  Similarity=0.248  Sum_probs=122.8

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC---CcEEEEecCCcccccCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA---DRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~---~~vKL~DFGla~~~~~~   76 (503)
                      ||||+| +|.+++.......+++.+++.++.||+.||+|||++||+||||||+||+++.+   +.+||+|||++..... 
T Consensus       105 ~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~-  183 (336)
T 3fhr_A          105 MECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ-  183 (336)
T ss_dssp             EECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC---
T ss_pred             EeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceeccc-
Confidence            799986 99999986555689999999999999999999999999999999999999764   4599999999976532 


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHH----HHHhcc--CCCCC
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYD----AVVRRQ--EIPPI  150 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~----~i~~~~--~~~~~  150 (503)
                          .......+|+.|+|||++.+.   .++.++|||||||++|+|++|..||..........    .+....  ...+.
T Consensus       184 ----~~~~~~~~t~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (336)
T 3fhr_A          184 ----NALQTPCYTPYYVAPEVLGPE---KYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPE  256 (336)
T ss_dssp             ------------------------C---HHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTT
T ss_pred             ----cccccCCCCcCccChhhhCCC---CCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchh
Confidence                223356789999999998643   67889999999999999999999997765443321    111111  11222


Q ss_pred             CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          151 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       151 ~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      ...+++.+.+||.+||+.||.+|||+.++++      ++|+.
T Consensus       257 ~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~------hp~~~  292 (336)
T 3fhr_A          257 WSEVSEDAKQLIRLLLKTDPTERLTITQFMN------HPWIN  292 (336)
T ss_dssp             STTCCHHHHHHHHHHSCSSGGGSCCHHHHHH------SHHHH
T ss_pred             hccCCHHHHHHHHHHCCCChhHCcCHHHHhc------Ccccc
Confidence            3578999999999999999999999999998      66654

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.95  E-value=1.1e-29  Score=255.84  Aligned_cols=181  Identities=23%  Similarity=0.275  Sum_probs=140.2

Q ss_pred             CcCCCC-CHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecccCCCcEEEccCCcEEEEecCCccccc
Q 010713            1 MKFYEG-SVGDRMAQLK--GGKLSLSNVFRYAIDLAQGILQLHSK---GILVLNLKPFNFILNEADRAVLGDVGIPHLLL   74 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~--~~~Ls~~~vl~i~~QIl~aL~yLHs~---gIvHrDLKP~NILld~~~~vKL~DFGla~~~~   74 (503)
                      |||++| +|.+++....  ...+++..+..++.|++.||+|||++   ||+||||||+|||++.++.+||+|||++....
T Consensus       106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~  185 (326)
T 3uim_A          106 YPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD  185 (326)
T ss_dssp             EECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred             EEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccC
Confidence            789985 9999997543  33599999999999999999999999   99999999999999999999999999997654


Q ss_pred             CCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCC-----ChHHHHHHHHh---cc-
Q 010713           75 GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR-----SVDEIYDAVVR---RQ-  145 (503)
Q Consensus        75 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~-----~~~e~~~~i~~---~~-  145 (503)
                      ...  ........||+.|+|||++.+.   .++.++|||||||++|+|++|..||...     ........+..   .. 
T Consensus       186 ~~~--~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  260 (326)
T 3uim_A          186 YKD--THVTTAVRGTIGHIAPEYLSTG---KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK  260 (326)
T ss_dssp             SSS--SCEECCCCSCGGGCCHHHHHHS---EECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCC
T ss_pred             ccc--ccccccccCCcCccCHHHhccC---CCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchh
Confidence            321  1222345699999999998743   5789999999999999999999999521     11111111111   00 


Q ss_pred             --------CCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhh
Q 010713          146 --------EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSS  186 (503)
Q Consensus       146 --------~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i  186 (503)
                              .....+...+..+.+++.+||+.||.+|||+.++++.|+..
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~  309 (326)
T 3uim_A          261 LEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD  309 (326)
T ss_dssp             STTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred             hhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence                    00111223347899999999999999999999999999863

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.95  E-value=4e-29  Score=253.61  Aligned_cols=183  Identities=17%  Similarity=0.235  Sum_probs=152.0

Q ss_pred             CcCCCC-CHHHH------HHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecccCCCcEEEccCCcEEEEecCCccc
Q 010713            1 MKFYEG-SVGDR------MAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVGIPHL   72 (503)
Q Consensus         1 MEy~~G-SL~d~------L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs-~gIvHrDLKP~NILld~~~~vKL~DFGla~~   72 (503)
                      |||++| +|.++      +.......+++..++.++.||+.||+|||+ +||+|+||||+||+++.++.++|+|||++..
T Consensus       122 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~  201 (348)
T 2pml_X          122 YEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEY  201 (348)
T ss_dssp             EECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             EeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCCCcEEEeccccccc
Confidence            799986 99988      543336789999999999999999999999 9999999999999999999999999999977


Q ss_pred             ccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCC-ccchHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHhccCCCCC
Q 010713           73 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISF-ETDSWGFACSIIEMLTGVQPRCGRSV-DEIYDAVVRRQEIPPI  150 (503)
Q Consensus        73 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~-ksDIwSLGviLyeLltG~~Pf~~~~~-~e~~~~i~~~~~~~~~  150 (503)
                      ....     ......+++.|+|||++.+..  .++. ++|||||||++|+|++|..||..... .+....+.....  .+
T Consensus       202 ~~~~-----~~~~~~~~~~y~aPE~~~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~--~~  272 (348)
T 2pml_X          202 MVDK-----KIKGSRGTYEFMPPEFFSNES--SYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNI--EY  272 (348)
T ss_dssp             CBTT-----EECSSCSCGGGCCGGGGSSCC--CEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCC--CC
T ss_pred             cccc-----cccCCCCCcCccCchhhcCCC--CCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCc--CC
Confidence            5331     234567899999999997531  3444 89999999999999999999988766 666666544322  22


Q ss_pred             C-------------------CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCC
Q 010713          151 P-------------------SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTG  198 (503)
Q Consensus       151 ~-------------------~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~  198 (503)
                      +                   ..+++.+.+||.+||+.||.+|||+.++++      ++|+...+|..
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~------hp~f~~~~~~~  333 (348)
T 2pml_X          273 PLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK------HEWLADTNIED  333 (348)
T ss_dssp             CCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT------SGGGTTCCHHH
T ss_pred             ccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc------CccccCCCHHH
Confidence            3                   568999999999999999999999999998      88888766543

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.95  E-value=3.6e-29  Score=253.04  Aligned_cols=186  Identities=19%  Similarity=0.267  Sum_probs=146.6

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH--------HCCCeecccCCCcEEEccCCcEEEEecCCcc
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLH--------SKGILVLNLKPFNFILNEADRAVLGDVGIPH   71 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLH--------s~gIvHrDLKP~NILld~~~~vKL~DFGla~   71 (503)
                      |||++| +|.+++..   ..+++.+++.++.||+.||+|||        ++||+||||||+||+++.++.+||+|||++.
T Consensus       119 ~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~  195 (342)
T 1b6c_B          119 SDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  195 (342)
T ss_dssp             ECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             EeecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCce
Confidence            799985 99999963   46999999999999999999999        8999999999999999999999999999997


Q ss_pred             cccCCCCCC-CCCCCccCCCCCCCccccCCCCCC---CCCCccchHHHHHHHHHHHhC----------CCCCCCC-----
Q 010713           72 LLLGIPLPS-SDLPRRLGTPNYMAPEQWQPEVRG---PISFETDSWGFACSIIEMLTG----------VQPRCGR-----  132 (503)
Q Consensus        72 ~~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~---~~s~ksDIwSLGviLyeLltG----------~~Pf~~~-----  132 (503)
                      ......... .......||+.|+|||++.+....   .++.++|||||||++|+|++|          ..||...     
T Consensus       196 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~  275 (342)
T 1b6c_B          196 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP  275 (342)
T ss_dssp             EEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred             eccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcc
Confidence            664322110 023456799999999999754211   123689999999999999999          7888764     


Q ss_pred             ChHHHHHHHHhccCCCCCCC-----CCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          133 SVDEIYDAVVRRQEIPPIPS-----GLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       133 ~~~e~~~~i~~~~~~~~~~~-----~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      ........+......+.++.     .++..+.+||.+||+.||++|||+.++++.|+.+...
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~  337 (342)
T 1b6c_B          276 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  337 (342)
T ss_dssp             CHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             cHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence            23344444444334444443     3446899999999999999999999999999988653

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.95  E-value=2.4e-28  Score=271.58  Aligned_cols=181  Identities=22%  Similarity=0.403  Sum_probs=152.6

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.. ....+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......  
T Consensus       469 ~E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~--  545 (656)
T 2j0j_A          469 MELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST--  545 (656)
T ss_dssp             EECCTTCBHHHHHHH-TTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC----
T ss_pred             EEcCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCCCc--
Confidence            79998 599999975 44579999999999999999999999999999999999999999999999999997654321  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........+++.|+|||++.+.   .++.++|||||||++|+|++ |..||.+....+....+... ..++.+..+++.+
T Consensus       546 ~~~~~~~~~t~~y~aPE~~~~~---~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~l  621 (656)
T 2j0j_A          546 YYKASKGKLPIKWMAPESINFR---RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG-ERLPMPPNCPPTL  621 (656)
T ss_dssp             --------CCGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHT-CCCCCCTTCCHHH
T ss_pred             ceeccCCCCCcceeCHHHhcCC---CCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC-CCCCCCccccHHH
Confidence            1122234567899999999743   68899999999999999997 99999998888887776553 4556778899999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      .+||.+||+.||.+|||+.++++.|+.+..
T Consensus       622 ~~li~~~l~~dP~~RPs~~el~~~L~~il~  651 (656)
T 2j0j_A          622 YSLMTKCWAYDPSRRPRFTELKAQLSTILE  651 (656)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence            999999999999999999999999988753

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.95  E-value=2.3e-28  Score=244.33  Aligned_cols=175  Identities=23%  Similarity=0.415  Sum_probs=132.6

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~-gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||+++.+..+... ....+++..+..++.||+.||+|||++ ||+|+||||+||+++.++.+||+|||++.....    
T Consensus       103 ~e~~~~~~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~----  177 (318)
T 2dyl_A          103 MELMGTCAEKLKKR-MQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVD----  177 (318)
T ss_dssp             ECCCSEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred             EeccCCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccC----
Confidence            78996556555543 467899999999999999999999995 999999999999999999999999999876533    


Q ss_pred             CCCCCCccCCCCCCCccccCCC--CCCCCCCccchHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHhccCCCCC--CCCC
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPE--VRGPISFETDSWGFACSIIEMLTGVQPRCGR-SVDEIYDAVVRRQEIPPI--PSGL  154 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~--~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~-~~~e~~~~i~~~~~~~~~--~~~~  154 (503)
                      ........+++.|+|||++...  ....++.++|||||||++|+|++|..||... ...+....+.... .+..  ...+
T Consensus       178 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~  256 (318)
T 2dyl_A          178 DKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEE-PPLLPGHMGF  256 (318)
T ss_dssp             ---------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSC-CCCCCSSSCC
T ss_pred             CccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccC-CCCCCccCCC
Confidence            1222345789999999998532  1235788999999999999999999999874 4445555554432 2222  2468


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ++.+.+||.+||+.||.+||++.++++
T Consensus       257 ~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          257 SGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             CHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            999999999999999999999999987

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.95  E-value=1e-28  Score=249.06  Aligned_cols=176  Identities=22%  Similarity=0.354  Sum_probs=122.4

Q ss_pred             CcCCCCCHHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecccCCCcEEEccCCcEEEEecCCcccccCC
Q 010713            1 MKFYEGSVGDRMAQL---KGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~GSL~d~L~~~---~~~~Ls~~~vl~i~~QIl~aL~yLHs~-gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~   76 (503)
                      |||++|+|.+++...   ....+++..+..++.|++.||.|||++ ||+||||||+||+++.++.+||+|||++......
T Consensus       100 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~  179 (327)
T 3aln_A          100 MELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS  179 (327)
T ss_dssp             ECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC----
T ss_pred             EeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceecccc
Confidence            799999998888643   367899999999999999999999999 9999999999999999999999999998765431


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCC-CCCCCCCccchHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhccCCCCC----
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPE-VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD-EIYDAVVRRQEIPPI----  150 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~-~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-e~~~~i~~~~~~~~~----  150 (503)
                          .......||+.|+|||++... ....++.++|||||||++|+|++|..||...... +....+.. ...+.+    
T Consensus       180 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~  254 (327)
T 3aln_A          180 ----IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK-GDPPQLSNSE  254 (327)
T ss_dssp             ------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCC-SCCCCCCCCS
T ss_pred             ----cccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhc-CCCCCCCCcc
Confidence                122344789999999998422 1335789999999999999999999999864322 22111111 111222    


Q ss_pred             CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          151 PSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       151 ~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ...+++.+.+||.+||+.||.+||++.++++
T Consensus       255 ~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          255 EREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             SCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             cccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            2468999999999999999999999999987

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.95  E-value=6.7e-28  Score=238.21  Aligned_cols=183  Identities=19%  Similarity=0.262  Sum_probs=138.3

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCC-
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL-   78 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~-   78 (503)
                      |||++| +|.+++.. ....+++.+++.++.||+.||+|||++||+|+||||+||+++.++.++|+|||++........ 
T Consensus        94 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~  172 (303)
T 1zy4_A           94 MEYCENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI  172 (303)
T ss_dssp             EECCCSCBHHHHHHH-SCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC----
T ss_pred             EecCCCCCHHHhhhc-cccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccch
Confidence            689974 99999975 455688999999999999999999999999999999999999999999999999876532110 


Q ss_pred             ----------CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHhcc--
Q 010713           79 ----------PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR-SVDEIYDAVVRRQ--  145 (503)
Q Consensus        79 ----------~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~-~~~e~~~~i~~~~--  145 (503)
                                .........|++.|+|||++.+.  +.++.++|||||||++|+|++   ||... ...+....+....  
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~~~~~~~  247 (303)
T 1zy4_A          173 LKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGT--GHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIE  247 (303)
T ss_dssp             ---------------------CTTSCHHHHTSC--SCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHSTTCC
T ss_pred             hccccccccccccccccCCCcccccCcccccCC--CCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhccccccc
Confidence                      01123355789999999998743  257899999999999999998   55432 2233333333221  


Q ss_pred             CCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCC
Q 010713          146 EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGG  195 (503)
Q Consensus       146 ~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~  195 (503)
                      ..+.++...+..+.++|.+||+.||.+|||+.++++      ++|+....
T Consensus       248 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~------h~~~~~~~  291 (303)
T 1zy4_A          248 FPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN------SGWLPVKH  291 (303)
T ss_dssp             CCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH------SSCSCCCC
T ss_pred             cCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC------CCCcCCCC
Confidence            223345677889999999999999999999999999      88876543

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.95  E-value=2.8e-28  Score=250.39  Aligned_cols=179  Identities=17%  Similarity=0.185  Sum_probs=142.0

Q ss_pred             CcCCC-CCHHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEcc-----------CCcEEEE
Q 010713            1 MKFYE-GSVGDRMAQL---KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE-----------ADRAVLG   65 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~---~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~-----------~~~vKL~   65 (503)
                      ||||+ |+|.+++...   ....+++.+++.++.||+.||+|||++||+||||||+|||++.           ++.+||+
T Consensus       146 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~  225 (365)
T 3e7e_A          146 GELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALI  225 (365)
T ss_dssp             ECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEEC
T ss_pred             EeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEe
Confidence            79998 6999999754   2467999999999999999999999999999999999999998           8999999


Q ss_pred             ecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc
Q 010713           66 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ  145 (503)
Q Consensus        66 DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~  145 (503)
                      |||++....... .........||+.|+|||++.+.   .++.++|||||||++|+|++|+.||........     . .
T Consensus       226 DFG~a~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-----~-~  295 (365)
T 3e7e_A          226 DLGQSIDMKLFP-KGTIFTAKCETSGFQCVEMLSNK---PWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC-----K-P  295 (365)
T ss_dssp             CCTTCEEGGGSC-TTEEECCSSCTTSCCCHHHHTTC---CBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE-----E-E
T ss_pred             eCchhhhhhccC-CCceeeeecCCCCCCChHHhcCC---CCCccccHHHHHHHHHHHHhCCCccccCCCCce-----e-e
Confidence            999997543211 12233456799999999999854   589999999999999999999999864322100     0 0


Q ss_pred             CCCCCCCCCcHHHHHHHHHhhhcCCCCC-CCHHHHHHHHHhhccC
Q 010713          146 EIPPIPSGLPPAVENVLLGCFEYDLRSR-PLMTDILRVFKSSQNS  189 (503)
Q Consensus       146 ~~~~~~~~~s~~l~~LI~~cL~~DP~~R-PS~~elL~~L~~i~~~  189 (503)
                      .........++.+.+++..||+.+|.+| |++.++.+.|+.....
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~  340 (365)
T 3e7e_A          296 EGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ  340 (365)
T ss_dssp             CSCCTTCSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             chhccccCcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence            0000112346789999999999999999 5788888888876543

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.95  E-value=5e-29  Score=261.60  Aligned_cols=168  Identities=15%  Similarity=0.202  Sum_probs=136.3

Q ss_pred             CcCCCCCHHHHHHhh-----cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccC
Q 010713            1 MKFYEGSVGDRMAQL-----KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG   75 (503)
Q Consensus         1 MEy~~GSL~d~L~~~-----~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~   75 (503)
                      |+++.|+|.+++...     ....+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus       184 ~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~  263 (413)
T 3dzo_A          184 YPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA  263 (413)
T ss_dssp             EECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTE
T ss_pred             eehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEeccceeecCC
Confidence            456678999998532     245678889999999999999999999999999999999999999999999999876532


Q ss_pred             CCCCCCCCCCccCCCCCCCccccCCC-------CCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC
Q 010713           76 IPLPSSDLPRRLGTPNYMAPEQWQPE-------VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP  148 (503)
Q Consensus        76 ~~~~~~~~~~~~Gt~~Y~APE~l~~~-------~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~  148 (503)
                            .....+| +.|+|||++.+.       ....++.++|||||||++|+|++|+.||......+....+..     
T Consensus       264 ------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~-----  331 (413)
T 3dzo_A          264 ------SAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFR-----  331 (413)
T ss_dssp             ------EECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGGGS-----
T ss_pred             ------ccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHHHh-----
Confidence                  1345577 999999998311       123578899999999999999999999987665443333322     


Q ss_pred             CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          149 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       149 ~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                       ....+++.+.+||.+||+.||++||++.++++
T Consensus       332 -~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~  363 (413)
T 3dzo_A          332 -SCKNIPQPVRALLEGFLRYPKEDRLLPLQAME  363 (413)
T ss_dssp             -SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             -hcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence             22467899999999999999999999888765

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.95  E-value=9.6e-29  Score=257.54  Aligned_cols=185  Identities=19%  Similarity=0.249  Sum_probs=145.3

Q ss_pred             CcCCCC-CHHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEE----ccCCcEEEEecCCccccc
Q 010713            1 MKFYEG-SVGDRMAQLK-GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL----NEADRAVLGDVGIPHLLL   74 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~-~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILl----d~~~~vKL~DFGla~~~~   74 (503)
                      ||||+| +|.+++.... ...+++.+++.++.||+.||+|||++||+||||||+|||+    +.++.+||+|||++....
T Consensus        88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~  167 (396)
T 4eut_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE  167 (396)
T ss_dssp             ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred             EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence            799985 9999997542 2349999999999999999999999999999999999999    777789999999997754


Q ss_pred             CCCCCCCCCCCccCCCCCCCccccCCCC-----CCCCCCccchHHHHHHHHHHHhCCCCCCC----CChHHHHHHHHhcc
Q 010713           75 GIPLPSSDLPRRLGTPNYMAPEQWQPEV-----RGPISFETDSWGFACSIIEMLTGVQPRCG----RSVDEIYDAVVRRQ  145 (503)
Q Consensus        75 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~-----~~~~s~ksDIwSLGviLyeLltG~~Pf~~----~~~~e~~~~i~~~~  145 (503)
                      .    ........||+.|+|||++.+..     ...++.++|||||||++|+|++|..||..    ....+....+....
T Consensus       168 ~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~  243 (396)
T 4eut_A          168 D----DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK  243 (396)
T ss_dssp             C----GGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSC
T ss_pred             C----CCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCC
Confidence            3    22234567999999999985310     02467899999999999999999999964    23344455554432


Q ss_pred             CCC-----------------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          146 EIP-----------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       146 ~~~-----------------------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      ...                       .++..++..+.++|.+||+.||++||++.++++.++.+.+.
T Consensus       244 p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~  310 (396)
T 4eut_A          244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR  310 (396)
T ss_dssp             CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred             CcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence            111                       11133457789999999999999999999999999888664

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.95  E-value=2e-28  Score=247.34  Aligned_cols=172  Identities=17%  Similarity=0.213  Sum_probs=142.8

Q ss_pred             CcCCC--CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEc-cCCcEEEEecCCcccccCCC
Q 010713            1 MKFYE--GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN-EADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~--GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld-~~~~vKL~DFGla~~~~~~~   77 (503)
                      |||+.  ++|.+++..  ...+++.+++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||++.....  
T Consensus       127 ~e~~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~--  202 (320)
T 3a99_A          127 LERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--  202 (320)
T ss_dssp             EECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCS--
T ss_pred             EEcCCCCccHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCcccccccc--
Confidence            57886  699999974  46799999999999999999999999999999999999999 778999999999977643  


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHH
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA  157 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~  157 (503)
                         .......||+.|+|||++.+.  ..++.++|||||||++|+|++|..||....  +    +..  .....+..++++
T Consensus       203 ---~~~~~~~gt~~y~aPE~~~~~--~~~~~~~Di~slG~il~el~~g~~pf~~~~--~----~~~--~~~~~~~~~~~~  269 (320)
T 3a99_A          203 ---TVYTDFDGTRVYSPPEWIRYH--RYHGRSAAVWSLGILLYDMVCGDIPFEHDE--E----IIR--GQVFFRQRVSSE  269 (320)
T ss_dssp             ---SCBCCCCSCGGGSCHHHHHHS--CBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--H----HHH--CCCCCSSCCCHH
T ss_pred             ---ccccCCCCCccCCChHHhccC--CCCCccchHHhHHHHHHHHHHCCCCCCChh--h----hhc--ccccccccCCHH
Confidence               222345789999999998643  123678999999999999999999996532  1    222  233456789999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCC
Q 010713          158 VENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGG  195 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~  195 (503)
                      +.+||.+||+.||++|||+.++++      ++|+....
T Consensus       270 ~~~li~~~l~~dp~~Rps~~~ll~------hp~~~~~~  301 (320)
T 3a99_A          270 CQHLIRWCLALRPSDRPTFEEIQN------HPWMQDVL  301 (320)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHT------SGGGSSCC
T ss_pred             HHHHHHHHccCChhhCcCHHHHhc------CHhhcCcc
Confidence            999999999999999999999988      77776543

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.95  E-value=6.2e-28  Score=254.90  Aligned_cols=184  Identities=19%  Similarity=0.280  Sum_probs=132.7

Q ss_pred             CcCCCCCHHHHHHhhcCCC-----CCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC-------------CcE
Q 010713            1 MKFYEGSVGDRMAQLKGGK-----LSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA-------------DRA   62 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~-----Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~-------------~~v   62 (503)
                      ||||+|+|.+++.......     .++..++.++.||+.||+|||++||+||||||+|||++.+             ..+
T Consensus        88 ~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~  167 (434)
T 2rio_A           88 LELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI  167 (434)
T ss_dssp             ECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred             EecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEE
Confidence            7999999999997432111     1333567899999999999999999999999999999754             489


Q ss_pred             EEEecCCcccccCCCCC-CCCCCCccCCCCCCCccccCCC----CCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHH
Q 010713           63 VLGDVGIPHLLLGIPLP-SSDLPRRLGTPNYMAPEQWQPE----VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDE  136 (503)
Q Consensus        63 KL~DFGla~~~~~~~~~-~~~~~~~~Gt~~Y~APE~l~~~----~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e  136 (503)
                      ||+|||++......... ........||+.|+|||++.+.    ....++.++|||||||++|+|++ |..||.+....+
T Consensus       168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~  247 (434)
T 2rio_A          168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE  247 (434)
T ss_dssp             EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH
T ss_pred             EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH
Confidence            99999999876432211 1122356799999999999752    12468899999999999999999 999997765443


Q ss_pred             HHHHHHhccCCCC-C----CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          137 IYDAVVRRQEIPP-I----PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       137 ~~~~i~~~~~~~~-~----~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      .  .+........ .    +..+++++.+||.+||+.||.+|||+.++++      |+|+.
T Consensus       248 ~--~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~------hp~f~  300 (434)
T 2rio_A          248 S--NIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR------HPLFW  300 (434)
T ss_dssp             H--HHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT------SGGGS
T ss_pred             H--HHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh------CCccC
Confidence            2  2322221111 1    1234588999999999999999999999987      77764

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.94  E-value=1.1e-27  Score=239.67  Aligned_cols=170  Identities=19%  Similarity=0.267  Sum_probs=141.2

Q ss_pred             CcC-CC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEc-cCCcEEEEecCCcccccCCC
Q 010713            1 MKF-YE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN-EADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy-~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld-~~~~vKL~DFGla~~~~~~~   77 (503)
                      ||| +. ++|.+++..  ...+++.+++.++.||+.||+|||++||+||||||+||+++ .++.++|+|||++.....  
T Consensus       117 ~e~~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~--  192 (312)
T 2iwi_A          117 LERPLPAQDLFDYITE--KGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHD--  192 (312)
T ss_dssp             EECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSSCEECCS--
T ss_pred             EEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcchhhhccc--
Confidence            566 55 599999974  45799999999999999999999999999999999999999 789999999999977643  


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHH
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA  157 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~  157 (503)
                         .......|++.|+|||++.+..  ..+.++||||||+++|+|++|+.||....  +    +..  ....++..++..
T Consensus       193 ---~~~~~~~~~~~y~aPE~~~~~~--~~~~~~Di~slG~il~~l~~g~~pf~~~~--~----~~~--~~~~~~~~~~~~  259 (312)
T 2iwi_A          193 ---EPYTDFDGTRVYSPPEWISRHQ--YHALPATVWSLGILLYDMVCGDIPFERDQ--E----ILE--AELHFPAHVSPD  259 (312)
T ss_dssp             ---SCBCCCCSCTTTSCHHHHHHSC--BCHHHHHHHHHHHHHHHHHHSSCSCCSHH--H----HHH--TCCCCCTTSCHH
T ss_pred             ---CcccccCCcccccCceeeecCC--CCCccchHHHHHHHHHHHHHCCCCCCChH--H----Hhh--hccCCcccCCHH
Confidence               2233557899999999986431  23458999999999999999999996532  1    222  234566789999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          158 VENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      +.++|.+||+.||++|||+.++++      ++|+..
T Consensus       260 ~~~li~~~l~~~p~~Rps~~e~l~------~~~~~~  289 (312)
T 2iwi_A          260 CCALIRRCLAPKPSSRPSLEEILL------DPWMQT  289 (312)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHH------STTTCC
T ss_pred             HHHHHHHHccCChhhCcCHHHHhc------ChhhcC
Confidence            999999999999999999999998      777764

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.93  E-value=1.2e-26  Score=231.67  Aligned_cols=153  Identities=18%  Similarity=0.235  Sum_probs=122.8

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEcc---CCcEEEEecCCcccccCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE---ADRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~---~~~vKL~DFGla~~~~~~   76 (503)
                      |||++| +|.+++.......+++.+++.++.||+.||+|||++||+||||||+||+++.   ++.++|+|||++..... 
T Consensus        94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~-  172 (299)
T 3m2w_A           94 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG-  172 (299)
T ss_dssp             ECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTT-
T ss_pred             EeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEecccccccccc-
Confidence            799985 9999998755568999999999999999999999999999999999999998   78899999998865321 


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc--CCCCCC---
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ--EIPPIP---  151 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~--~~~~~~---  151 (503)
                                                 ..++.++|||||||++|+|++|..||.+..............  .....+   
T Consensus       173 ---------------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (299)
T 3m2w_A          173 ---------------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE  225 (299)
T ss_dssp             ---------------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHH
T ss_pred             ---------------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchh
Confidence                                       146778999999999999999999998765443322111111  111122   


Q ss_pred             -CCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          152 -SGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       152 -~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                       ..+++++.+||.+||+.||.+|||+.|+++
T Consensus       226 ~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~  256 (299)
T 3m2w_A          226 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  256 (299)
T ss_dssp             HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence             568999999999999999999999999998

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.92  E-value=1.7e-25  Score=248.14  Aligned_cols=173  Identities=21%  Similarity=0.277  Sum_probs=132.8

Q ss_pred             CcCCC-CCHHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCc---EEEEecCCcccccC
Q 010713            1 MKFYE-GSVGDRMAQLK-GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR---AVLGDVGIPHLLLG   75 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~-~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~---vKL~DFGla~~~~~   75 (503)
                      ||||+ |+|.+++.... ...+++..++.++.||+.||+|||++||+||||||+||+++.++.   ++|+|||++.....
T Consensus        97 mEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~  176 (676)
T 3qa8_A           97 MEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ  176 (676)
T ss_dssp             EECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTS
T ss_pred             EEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccccccccc
Confidence            78996 59999997532 236999999999999999999999999999999999999997764   99999999987643


Q ss_pred             CCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHH---------Hh---
Q 010713           76 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV---------VR---  143 (503)
Q Consensus        76 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i---------~~---  143 (503)
                          ........||+.|+|||.+.+.   .++.++|||||||++|+|++|..||........+...         ..   
T Consensus       177 ----~~~~~~~~gt~~Y~APE~l~~~---~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~  249 (676)
T 3qa8_A          177 ----GELCTEFVGTLQYLAPELLEQK---KYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDD  249 (676)
T ss_dssp             ----CCCCCCCCSCCTTCSSCSSCCS---CCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCC
T ss_pred             ----ccccccccCCcccCChHHhccC---CCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhh
Confidence                2233456899999999999743   6889999999999999999999999765332211000         00   


Q ss_pred             --c----cCC----CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHH
Q 010713          144 --R----QEI----PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL  180 (503)
Q Consensus       144 --~----~~~----~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL  180 (503)
                        .    ...    ..+...+++.+.+||.+||..||.+|||+.+++
T Consensus       250 l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL  296 (676)
T 3qa8_A          250 LTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP  296 (676)
T ss_dssp             CSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred             hccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence              0    000    012234678999999999999999999998854

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.90  E-value=6.1e-25  Score=222.76  Aligned_cols=165  Identities=12%  Similarity=0.082  Sum_probs=127.9

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCCeecccCCCcEEEccCC------------------
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLH-SKGILVLNLKPFNFILNEAD------------------   60 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLH-s~gIvHrDLKP~NILld~~~------------------   60 (503)
                      ||||+ |++.+.+.   ...+++.+++.++.||+.||+||| ++||+||||||+|||++.++                  
T Consensus       141 ~E~~~~g~ll~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~  217 (336)
T 2vuw_A          141 LEFEFGGIDLEQMR---TKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSC  217 (336)
T ss_dssp             EEEECCCEETGGGT---TTCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECT
T ss_pred             EEecCCCccHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCC
Confidence            78997 45666663   367899999999999999999999 99999999999999999887                  


Q ss_pred             --cEEEEecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHH-HHHHHhCCCCCCCCCh-HH
Q 010713           61 --RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACS-IIEMLTGVQPRCGRSV-DE  136 (503)
Q Consensus        61 --~vKL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGvi-LyeLltG~~Pf~~~~~-~e  136 (503)
                        .+||+|||+++....        ....||+.|+|||++.+.    .+.++|||||+++ .+++++|..||.+... ..
T Consensus       218 ~~~vkL~DFG~a~~~~~--------~~~~gt~~y~aPE~~~g~----~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~  285 (336)
T 2vuw_A          218 GLQVSIIDYTLSRLERD--------GIVVFCDVSMDEDLFTGD----GDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHY  285 (336)
T ss_dssp             TEEEEECCCTTCBEEET--------TEEECCCCTTCSGGGCCC----SSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHH
T ss_pred             CceEEEeeccccEecCC--------CcEEEeecccChhhhcCC----CccceehhhhhCCCCcccccccCCCcchhhhhH
Confidence              899999999987643        245899999999999854    2789999998777 7788889999854211 11


Q ss_pred             HHHHHHhccCCCC-----CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHH-HHHHhhccCcC
Q 010713          137 IYDAVVRRQEIPP-----IPSGLPPAVENVLLGCFEYDLRSRPLMTDIL-RVFKSSQNSVH  191 (503)
Q Consensus       137 ~~~~i~~~~~~~~-----~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL-~~L~~i~~~~~  191 (503)
                      ....+........     .+..+++++.+||.+||+.|     |+.|++ +      |+|+
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~------Hp~f  335 (336)
T 2vuw_A          286 LTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQ------HSLF  335 (336)
T ss_dssp             HHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHH------CGGG
T ss_pred             HHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhc------CCCc
Confidence            2223332111111     12347889999999999976     999998 7      7765

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.90  E-value=1.3e-24  Score=216.83  Aligned_cols=151  Identities=17%  Similarity=0.145  Sum_probs=120.0

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.   .+ ....++..++.||+.||+|||++||+||||||+|||++.++.+||++++           
T Consensus       110 ~e~~~g~~L~~~l~---~~-~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~-----------  174 (286)
T 3uqc_A          110 AEWIRGGSLQEVAD---TS-PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPA-----------  174 (286)
T ss_dssp             EECCCEEEHHHHHT---TC-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCC-----------
T ss_pred             EEecCCCCHHHHHh---cC-CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEecc-----------
Confidence            799985 9999984   23 4667899999999999999999999999999999999999999997433           


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHH---HHHhccCCC--CCCCCC
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYD---AVVRRQEIP--PIPSGL  154 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~---~i~~~~~~~--~~~~~~  154 (503)
                                  |++          +++.++|||||||++|+|++|+.||.+.+..+...   ........+  .....+
T Consensus       175 ------------~~~----------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (286)
T 3uqc_A          175 ------------TMP----------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDI  232 (286)
T ss_dssp             ------------CCT----------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTS
T ss_pred             ------------ccC----------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCC
Confidence                        222          36789999999999999999999998765432110   000110000  123678


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      ++++.+||.+||+.||++| |+.++++.|+.+...
T Consensus       233 ~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~  266 (286)
T 3uqc_A          233 PFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV  266 (286)
T ss_dssp             CHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred             CHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence            9999999999999999999 999999999988654

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.90  E-value=3e-24  Score=239.07  Aligned_cols=163  Identities=22%  Similarity=0.302  Sum_probs=127.1

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+++.    ..+++.+++.++.||+.||+|||++||+||||||+|||++.+ .+||+|||++.....    
T Consensus       163 ~E~~~g~~L~~~~~----~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~----  233 (681)
T 2pzi_A          163 MEYVGGQSLKRSKG----QKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS----  233 (681)
T ss_dssp             EECCCCEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEETTC----
T ss_pred             EEeCCCCcHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchhccc----
Confidence            799986 8887764    279999999999999999999999999999999999999875 899999999977533    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                         .....||+.|+|||++.+.    ++.++|||||||++|+|++|..||.+......        .........++.+.
T Consensus       234 ---~~~~~gt~~y~aPE~~~~~----~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~--------~~~~~~~~~~~~l~  298 (681)
T 2pzi_A          234 ---FGYLYGTPGFQAPEIVRTG----PTVATDIYTVGRTLAALTLDLPTRNGRYVDGL--------PEDDPVLKTYDSYG  298 (681)
T ss_dssp             ---CSCCCCCTTTSCTTHHHHC----SCHHHHHHHHHHHHHHHHSCCCEETTEECSSC--------CTTCHHHHHCHHHH
T ss_pred             ---CCccCCCccccCHHHHcCC----CCCceehhhhHHHHHHHHhCCCCCcccccccc--------cccccccccCHHHH
Confidence               1456799999999998643    47899999999999999999998865221100        00000012357899


Q ss_pred             HHHHHhhhcCCCCCCC-HHHHHHHHHhhc
Q 010713          160 NVLLGCFEYDLRSRPL-MTDILRVFKSSQ  187 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS-~~elL~~L~~i~  187 (503)
                      +||.+||+.||.+||+ +.++...|..+.
T Consensus       299 ~li~~~l~~dP~~R~~~~~~l~~~l~~~~  327 (681)
T 2pzi_A          299 RLLRRAIDPDPRQRFTTAEEMSAQLTGVL  327 (681)
T ss_dssp             HHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             HHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence            9999999999999995 666666666553

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.83  E-value=6.3e-22  Score=216.54  Aligned_cols=114  Identities=15%  Similarity=0.130  Sum_probs=81.9

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+| +|.++|.  ..+.+++.   +|+.||+.||+|||++||+||||||+|||++.++++||+|||+|+....   .
T Consensus       321 MEyv~G~~L~d~i~--~~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~---~  392 (569)
T 4azs_A          321 MEKLPGRLLSDMLA--AGEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ---D  392 (569)
T ss_dssp             EECCCSEEHHHHHH--TTCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC-----
T ss_pred             EecCCCCcHHHHHH--hCCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCC---C
Confidence            899997 9999997  56778765   4789999999999999999999999999999999999999999987643   1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCC
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGV  126 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~  126 (503)
                      .......+||+.|||||++.+.    +..++|+||+|+++++|.++.
T Consensus       393 ~~~~~t~vGTp~YmAPE~l~g~----~~~~~d~~s~g~~~~~l~~~~  435 (569)
T 4azs_A          393 CSWPTNLVQSFFVFVNELFAEN----KSWNGFWRSAPVHPFNLPQPW  435 (569)
T ss_dssp             -CCSHHHHHHHHHHHHHHC---------------------CCCCTTH
T ss_pred             CccccCceechhhccHHHhCCC----CCCcccccccccchhhhcccc
Confidence            2234457899999999999753    567899999999988876654

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.52  E-value=2.9e-16  Score=170.63  Aligned_cols=117  Identities=15%  Similarity=0.143  Sum_probs=93.3

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+ |+|.+++..          +..++.||++||+|||++||+||||||+|||++.  .+||+|||+++........
T Consensus       418 mE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~  485 (540)
T 3en9_A          418 MSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDK  485 (540)
T ss_dssp             EECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHH
T ss_pred             EECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCcccc
Confidence            79998 599999853          6789999999999999999999999999999998  9999999999876331100


Q ss_pred             CC----CCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCC
Q 010713           80 SS----DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRC  130 (503)
Q Consensus        80 ~~----~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~  130 (503)
                      ..    ......||+.|||||++... ...|+..+|+|+..+-..+.+.++.+|.
T Consensus       486 ~~~~~~~~~~~~GT~~y~APEv~~~~-~~~Y~~~~d~ws~vl~~l~~v~~r~rY~  539 (540)
T 3en9_A          486 AVDLIVFKKAVLSTHHEKFDEIWERF-LEGYKSVYDRWEIILELMKDVERRARYV  539 (540)
T ss_dssp             HHHHHHHHHHHHHHCGGGHHHHHHHH-HHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred             ccchhhhhhhhcCCCCcCCHHHHHHH-HHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence            00    01245799999999999742 1246778899999988888887776663

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.21  E-value=2.2e-12  Score=128.52  Aligned_cols=73  Identities=11%  Similarity=0.098  Sum_probs=61.6

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++| +|.+ +.        ..+...++.|++.||+|||++||+||||||+|||++ ++.++|+|||++...      
T Consensus       179 mE~~~g~~L~~-l~--------~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG~a~~~------  242 (282)
T 1zar_A          179 MELIDAKELYR-VR--------VENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFPQSVEV------  242 (282)
T ss_dssp             EECCCCEEGGG-CC--------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCTTCEET------
T ss_pred             EEecCCCcHHH-cc--------hhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECCCCeEC------
Confidence            799986 8887 42        134557999999999999999999999999999999 999999999988642      


Q ss_pred             CCCCCCccCCCCCCCccccC
Q 010713           80 SSDLPRRLGTPNYMAPEQWQ   99 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~   99 (503)
                                ..++|||.+.
T Consensus       243 ----------~~~~a~e~l~  252 (282)
T 1zar_A          243 ----------GEEGWREILE  252 (282)
T ss_dssp             ----------TSTTHHHHHH
T ss_pred             ----------CCCCHHHHHH
Confidence                      3468899874

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.00  E-value=1.2e-10  Score=114.01  Aligned_cols=66  Identities=17%  Similarity=0.229  Sum_probs=55.5

Q ss_pred             CcCCC--C----CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCCeecccCCCcEEEccCCcEEEEecCCcccc
Q 010713            1 MKFYE--G----SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLH-SKGILVLNLKPFNFILNEADRAVLGDVGIPHLL   73 (503)
Q Consensus         1 MEy~~--G----SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLH-s~gIvHrDLKP~NILld~~~~vKL~DFGla~~~   73 (503)
                      |||++  |    +|.+....     .++.++..++.|++.||.||| ++||+||||||+|||++.  .++|+|||++...
T Consensus       147 mE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          147 MEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             EECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred             EEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence            78995  3    66665432     235678899999999999999 999999999999999998  9999999998653

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.60  E-value=8.3e-09  Score=107.60  Aligned_cols=64  Identities=17%  Similarity=0.247  Sum_probs=51.9

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC----------cEEEEecCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD----------RAVLGDVGI   69 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~----------~vKL~DFGl   69 (503)
                      |||++| +|.++.        ...+...++.||+.+|.+||++|||||||||.|||+++++          .+.|+||+.
T Consensus       190 ME~i~G~~L~~l~--------~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q  261 (397)
T 4gyi_A          190 MSLVDALPMRQVS--------SVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQ  261 (397)
T ss_dssp             EECCSCEEGGGCC--------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTT
T ss_pred             EEecCCccHhhhc--------ccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCC
Confidence            899998 554322        1234567889999999999999999999999999998776          388999997


Q ss_pred             ccc
Q 010713           70 PHL   72 (503)
Q Consensus        70 a~~   72 (503)
                      +..
T Consensus       262 ~V~  264 (397)
T 4gyi_A          262 MVS  264 (397)
T ss_dssp             CEE
T ss_pred             ccc
Confidence            654

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=97.72  E-value=0.00032  Score=67.17  Aligned_cols=139  Identities=8%  Similarity=-0.009  Sum_probs=94.7

Q ss_pred             CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCCCCCCC
Q 010713            7 SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPR   85 (503)
Q Consensus         7 SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs-~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~~~~~~   85 (503)
                      ||.+.|.. .+.+|++++++.++.|.+.+|.-+-. +.-..+=+.|..|++..+|.+.+.+ ..+.              
T Consensus        34 SL~eIL~~-~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~--------------   97 (229)
T 2yle_A           34 SLEEILRL-YNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD--------------   97 (229)
T ss_dssp             EHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C-----------------
T ss_pred             cHHHHHHH-cCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc--------------
Confidence            68888875 68899999999999999999887722 2212333456899999999888753 1110              


Q ss_pred             ccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHHHHHHHh
Q 010713           86 RLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGC  165 (503)
Q Consensus        86 ~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~~LI~~c  165 (503)
                       .....+.|||....    ..+.+.=|||||++||..+--.                   ....-+..+++.|.+||..|
T Consensus        98 -~~~~~~~~pe~~~~----~~te~~~IysLG~tLY~ALDyg-------------------L~e~eE~eLS~~LE~LL~~M  153 (229)
T 2yle_A           98 -AGEPPPVAGKLGYS----QCMETEVIESLGIIIYKALDYG-------------------LKENEERELSPPLEQLIDHM  153 (229)
T ss_dssp             ----------CCSSS----SSCHHHHHHHHHHHHHHHHTTT-------------------CCTTEEECCCHHHHHHHHHH
T ss_pred             -ccccCCCChhhccc----cchHHHHHHHHHHHHHHHhhcC-------------------CCcccchhhCHHHHHHHHHH
Confidence             11234568887641    3467889999999999887422                   22234567899999999999


Q ss_pred             hhc-------------------------CCCCCCCHHHHHHHHHh
Q 010713          166 FEY-------------------------DLRSRPLMTDILRVFKS  185 (503)
Q Consensus       166 L~~-------------------------DP~~RPS~~elL~~L~~  185 (503)
                      ...                         .+..|+++.+|++.-..
T Consensus       154 t~~~~d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~C~~  198 (229)
T 2yle_A          154 ANTVEADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKLCAA  198 (229)
T ss_dssp             TTCCC--------------------CCSCCCCCCSHHHHHHHHHT
T ss_pred             HhcccccccccccccccccccccccccccccCcCCHHHHHHHHHh
Confidence            866                         24578899999886654

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=97.71  E-value=2.9e-06  Score=84.32  Aligned_cols=121  Identities=14%  Similarity=0.098  Sum_probs=75.2

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH--------------------------------------
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS--------------------------------------   41 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs--------------------------------------   41 (503)
                      |||++| +|.+...    ..++.++...++.|++..|..||+                                      
T Consensus        95 m~~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (304)
T 3sg8_A           95 FTKIKGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQM  170 (304)
T ss_dssp             EECCCCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred             EcccCCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccH
Confidence            566888 5554332    247888888899999999999996                                      


Q ss_pred             --------------------CCCeecccCCCcEEEcc--CCcEEEEecCCcccccCCCCCCCCCCCccCCCCCCCccccC
Q 010713           42 --------------------KGILVLNLKPFNFILNE--ADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQ   99 (503)
Q Consensus        42 --------------------~gIvHrDLKP~NILld~--~~~vKL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~   99 (503)
                                          ..++|+|++|.||+++.  ...+.++||+.+......    ...........-..|+...
T Consensus       171 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~----~Dl~~~~~~~~~~~~~~~~  246 (304)
T 3sg8_A          171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPD----NDFISLMEDDEEYGMEFVS  246 (304)
T ss_dssp             HHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTT----HHHHTTCCTTTSCCHHHHH
T ss_pred             HHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChH----HHHHHHHhhccccCHHHHH
Confidence                                13699999999999998  456789999987653210    0000000000001222211


Q ss_pred             C--CCCC---------CCCCccchHHHHHHHHHHHhCCCCC
Q 010713          100 P--EVRG---------PISFETDSWGFACSIIEMLTGVQPR  129 (503)
Q Consensus       100 ~--~~~~---------~~s~ksDIwSLGviLyeLltG~~Pf  129 (503)
                      .  ..++         ......+.|+++.++|.+.+|..+|
T Consensus       247 ~~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          247 KILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             HHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence            0  0000         1112358999999999999998765

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=97.60  E-value=2.2e-05  Score=75.63  Aligned_cols=64  Identities=16%  Similarity=0.068  Sum_probs=49.2

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH--------------------------------------
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS--------------------------------------   41 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs--------------------------------------   41 (503)
                      |||++| +|.+.+.       +..+...++.+++.+|..||+                                      
T Consensus        89 ~e~i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (263)
T 3tm0_A           89 MSEADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED  161 (263)
T ss_dssp             EECCSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTT
T ss_pred             EEecCCeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccc
Confidence            789998 6665431       223345788999999999998                                      


Q ss_pred             ---------------------CCCeecccCCCcEEEccCCcEEEEecCCcc
Q 010713           42 ---------------------KGILVLNLKPFNFILNEADRAVLGDVGIPH   71 (503)
Q Consensus        42 ---------------------~gIvHrDLKP~NILld~~~~vKL~DFGla~   71 (503)
                                           ..++|+|++|.||+++.+..+.|+||+.+.
T Consensus       162 ~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             CSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             ccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence                                 448999999999999875556799998653

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=97.43  E-value=9.8e-05  Score=74.81  Aligned_cols=68  Identities=16%  Similarity=0.196  Sum_probs=54.3

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH--------------------------------------
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS--------------------------------------   41 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs--------------------------------------   41 (503)
                      |||++| .+.+.    .-..++..+...++.+++..|..||+                                      
T Consensus       120 me~v~G~~l~~~----~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (359)
T 3dxp_A          120 MEFVSGRVLWDQ----SLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP  195 (359)
T ss_dssp             EECCCCBCCCCT----TCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred             EEecCCeecCCC----ccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence            688887 34321    12347888999999999999999997                                      


Q ss_pred             --------------------CCCeecccCCCcEEEccCCc--EEEEecCCccc
Q 010713           42 --------------------KGILVLNLKPFNFILNEADR--AVLGDVGIPHL   72 (503)
Q Consensus        42 --------------------~gIvHrDLKP~NILld~~~~--vKL~DFGla~~   72 (503)
                                          ..++|+|++|.||+++.++.  +.|+||+.+..
T Consensus       196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                                35899999999999987753  68999998764

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=96.70  E-value=0.00084  Score=63.61  Aligned_cols=28  Identities=11%  Similarity=-0.046  Sum_probs=24.2

Q ss_pred             CeecccCCCcEEEccCCcEEEEecCCcc
Q 010713           44 ILVLNLKPFNFILNEADRAVLGDVGIPH   71 (503)
Q Consensus        44 IvHrDLKP~NILld~~~~vKL~DFGla~   71 (503)
                      ++|+|++|.||+++.++.+.|+||+.+.
T Consensus       186 l~HgDl~~~Nil~~~~~~~~liD~~~a~  213 (264)
T 1nd4_A          186 VTHGDACLPNIMVENGRFSGFIDCGRLG  213 (264)
T ss_dssp             EECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             EECCCCCCCcEEEECCcEEEEEcchhcc
Confidence            9999999999999876556799999754

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=95.88  E-value=0.0094  Score=59.10  Aligned_cols=29  Identities=21%  Similarity=0.253  Sum_probs=23.9

Q ss_pred             CeecccCCCcEEEcc---CCcE-EEEecCCccc
Q 010713           44 ILVLNLKPFNFILNE---ADRA-VLGDVGIPHL   72 (503)
Q Consensus        44 IvHrDLKP~NILld~---~~~v-KL~DFGla~~   72 (503)
                      ++|+|++|.||+++.   ++.+ .|+||+.+..
T Consensus       192 ~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          192 LIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             EECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             eEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence            599999999999987   4554 7999997654

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=94.63  E-value=0.036  Score=54.54  Aligned_cols=30  Identities=13%  Similarity=0.088  Sum_probs=26.7

Q ss_pred             CCCeecccCCCcEEEccCCcEEEEecCCcc
Q 010713           42 KGILVLNLKPFNFILNEADRAVLGDVGIPH   71 (503)
Q Consensus        42 ~gIvHrDLKP~NILld~~~~vKL~DFGla~   71 (503)
                      ..++|+|+++.||+++.++.+.|+||+.+.
T Consensus       222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             CCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             CceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence            579999999999999878889999999653

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=94.54  E-value=0.026  Score=54.02  Aligned_cols=28  Identities=21%  Similarity=0.101  Sum_probs=24.1

Q ss_pred             CeecccCCCcEEEccCCcEEEEecCCcc
Q 010713           44 ILVLNLKPFNFILNEADRAVLGDVGIPH   71 (503)
Q Consensus        44 IvHrDLKP~NILld~~~~vKL~DFGla~   71 (503)
                      ++|+|+.+.|||++.++.+-|+||+.+.
T Consensus       195 l~HGDl~~~Nil~~~~~~~~viDwe~a~  222 (272)
T 4gkh_A          195 VTHGDFSLDNLIFDEGKLIGCIDVGRVG  222 (272)
T ss_dssp             EECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             EEcCCCCCCeEEEECCeEEEEEECcccc
Confidence            6899999999999977666799999764

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=91.79  E-value=0.1  Score=53.88  Aligned_cols=32  Identities=6%  Similarity=0.128  Sum_probs=27.7

Q ss_pred             HHCCCeecccCCCcEEEccCCcEEEEecCCccc
Q 010713           40 HSKGILVLNLKPFNFILNEADRAVLGDVGIPHL   72 (503)
Q Consensus        40 Hs~gIvHrDLKP~NILld~~~~vKL~DFGla~~   72 (503)
                      +...++|+|++|.|||++.++ +.++||+.+..
T Consensus       230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~  261 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY  261 (420)
T ss_dssp             BCCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred             CCCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence            456799999999999998776 99999998754

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=90.05  E-value=0.28  Score=47.92  Aligned_cols=29  Identities=14%  Similarity=0.091  Sum_probs=24.5

Q ss_pred             CCeecccCCCcEEEccCCcEEEEecCCccc
Q 010713           43 GILVLNLKPFNFILNEADRAVLGDVGIPHL   72 (503)
Q Consensus        43 gIvHrDLKP~NILld~~~~vKL~DFGla~~   72 (503)
                      .++|+|+.+.||+ ..++.+.++||..+..
T Consensus       174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          174 AACHCDPLCENFL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             eeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence            3899999999999 5667889999987653

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=87.51  E-value=0.21  Score=48.92  Aligned_cols=29  Identities=17%  Similarity=0.104  Sum_probs=24.6

Q ss_pred             CCeecccCCCcEEEccCCcEEEEecCCcc
Q 010713           43 GILVLNLKPFNFILNEADRAVLGDVGIPH   71 (503)
Q Consensus        43 gIvHrDLKP~NILld~~~~vKL~DFGla~   71 (503)
                      +++|+|+++.||+++.+..+.++||+.+.
T Consensus       188 ~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          188 GVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             EEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             ccCCCCCCccCEEEeCCceEEEecchhcc
Confidence            69999999999999876555799998653

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=86.77  E-value=0.42  Score=46.87  Aligned_cols=29  Identities=10%  Similarity=-0.081  Sum_probs=24.7

Q ss_pred             CCCeecccCCCcEEEccCCcEEEEecCCccc
Q 010713           42 KGILVLNLKPFNFILNEADRAVLGDVGIPHL   72 (503)
Q Consensus        42 ~gIvHrDLKP~NILld~~~~vKL~DFGla~~   72 (503)
                      ..++|+|+++.||+++ + .+.++||+.+..
T Consensus       195 ~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          195 VLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             CEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             eeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence            4589999999999998 4 899999987643

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=86.37  E-value=0.28  Score=48.44  Aligned_cols=31  Identities=13%  Similarity=0.048  Sum_probs=26.9

Q ss_pred             CCCeecccCCCcEEEccC----CcEEEEecCCccc
Q 010713           42 KGILVLNLKPFNFILNEA----DRAVLGDVGIPHL   72 (503)
Q Consensus        42 ~gIvHrDLKP~NILld~~----~~vKL~DFGla~~   72 (503)
                      ..++|+|+.+.|||++.+    +.+.|+||+.+..
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence            469999999999999874    6799999998754

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=85.13  E-value=0.3  Score=48.66  Aligned_cols=30  Identities=10%  Similarity=-0.011  Sum_probs=24.9

Q ss_pred             CCCeecccCCCcEEEccCCcEEEEecCCcc
Q 010713           42 KGILVLNLKPFNFILNEADRAVLGDVGIPH   71 (503)
Q Consensus        42 ~gIvHrDLKP~NILld~~~~vKL~DFGla~   71 (503)
                      ..++|+|++|.||+++++..+.|+||+.+.
T Consensus       222 ~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~  251 (357)
T 3ats_A          222 PVLLWGDARVGNVLYRDFQPVAVLDWEMVA  251 (357)
T ss_dssp             CEEECSSCSGGGEEEETTEEEEECCGGGCE
T ss_pred             ceEEeCCCCCCeEEEeCCcEEEEEcccccc
Confidence            469999999999999964457899999764

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=82.10  E-value=0.7  Score=46.17  Aligned_cols=31  Identities=13%  Similarity=0.120  Sum_probs=27.1

Q ss_pred             CCCeecccCCCcEEEccCCcEEEEecCCccc
Q 010713           42 KGILVLNLKPFNFILNEADRAVLGDVGIPHL   72 (503)
Q Consensus        42 ~gIvHrDLKP~NILld~~~~vKL~DFGla~~   72 (503)
                      ..++|+|+.+.||+++.++.+.++||+.+..
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            3599999999999999888899999987654

>2zzd_A Thiocyanate hydrolase subunit alpha; scnase, cobalt, metalloprotein, sulfenic acid, sulfinic acid, nitrIle hydratase, carbonyl sulfide; HET: FRU TLA BGC; 1.78A {Thiobacillus thioparus} PDB: 2dd4_A 2dxb_A 2dd5_A* 2dxc_A*

Probab=81.51  E-value=1.6  Score=37.65  Aligned_cols=51  Identities=27%  Similarity=0.163  Sum_probs=33.8

Q ss_pred             ccccccCCcch-hhc--cccccccEEEeecccccccccCCcccCCcceeeeEEEEe
Q 010713          325 ETLWKGHFSEL-QMA--ESYCVGQFVRLKANVVSPQFEWPRKREGVWATGRICMVV  377 (503)
Q Consensus       325 ~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  377 (503)
                      ...++|.+..- ..+  ..|.|||.||+|.-...=----|+--.|  .+|+|..+.
T Consensus        18 ~a~~~G~p~~R~~~~~~prF~vGDrVrvr~~~p~gHtRlP~YvRG--k~G~I~~~~   71 (126)
T 2zzd_A           18 MATGIGDPQCFKGMAGKSKFNVGDRVRIKDLPDLFYTRTMTYTRG--ATGTIVRLV   71 (126)
T ss_dssp             HHTTTCTTGGGTTTTCSCSSCTTCEEEECCCCCSSCCSSCGGGTT--CEEEEEEEE
T ss_pred             hhcccCCCcccCCCCCCCccCCCCEEEEccCCCCCceeccHHhCC--CEEEEEEEe
Confidence            34578888777 433  5599999999996333222222444445  799998887

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=81.11  E-value=1  Score=45.14  Aligned_cols=28  Identities=18%  Similarity=-0.015  Sum_probs=23.5

Q ss_pred             CCeecccCCCcEEEccCCcEEEEecCCcc
Q 010713           43 GILVLNLKPFNFILNEADRAVLGDVGIPH   71 (503)
Q Consensus        43 gIvHrDLKP~NILld~~~~vKL~DFGla~   71 (503)
                      .++|+|+++.|||++.+ .+.++||..+.
T Consensus       213 ~l~HgDl~~~Nil~~~~-~~~lID~e~a~  240 (369)
T 3c5i_A          213 VFCHNDLQENNIINTNK-CLRLIDFEYSG  240 (369)
T ss_dssp             EEECSCCCGGGEEECC--CEEECCCTTCE
T ss_pred             EEEeCCCCcccEEecCC-cEEEEEecCCC
Confidence            58999999999999755 48999998664

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=80.54  E-value=1.1  Score=45.41  Aligned_cols=31  Identities=10%  Similarity=0.082  Sum_probs=25.8

Q ss_pred             HCCCeecccCCCcEEEccCCcEEEEecCCccc
Q 010713           41 SKGILVLNLKPFNFILNEADRAVLGDVGIPHL   72 (503)
Q Consensus        41 s~gIvHrDLKP~NILld~~~~vKL~DFGla~~   72 (503)
                      ...++|+|+.|.|||++.+ .+.++||..+..
T Consensus       226 ~~~L~HGDl~~~Nil~~~~-~~~lID~e~a~~  256 (397)
T 2olc_A          226 AETLIHGDLHTGSIFASEH-ETKVIDPEFAFY  256 (397)
T ss_dssp             CCEEECSCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred             CCceeeCCCCcCcEEEeCC-CeEEEeCccccc
Confidence            3579999999999999865 489999987653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	503
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-30
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	4e-30
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	5e-30
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	7e-29
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	6e-27
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	9e-27
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-26
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	3e-26
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	7e-26
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-25
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	3e-25
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	8e-25
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-24
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	4e-24
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	7e-24
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	8e-24
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	9e-24
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-23
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-23
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-23
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	3e-23
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	4e-23
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	8e-23
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	9e-23
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-22
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-22
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-22
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	3e-22
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	4e-22
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	5e-22
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	7e-22
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-21
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-21
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	4e-21
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-20
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	4e-20
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	4e-20
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	5e-20
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	8e-20
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	1e-19
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-19
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-19
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	4e-19
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	4e-19
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	5e-19
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-18
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	5e-18
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	7e-18
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	9e-18
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	5e-17
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	7e-17
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	7e-17
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-15
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	5e-15
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	5e-14
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	8e-13
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-12
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	4e-12
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-11
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	7e-11
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-10
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	9e-09

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (295), Expect = 1e-30
 Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 5/194 (2%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
            ++ EGS       +   K  +  +   A   AQG+  LH+K I+  +LK  N  L+E  
Sbjct: 82  TQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDL 141

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
              +GD G+  +       S    +  G+  +MAPE  + + + P SF++D + F   + 
Sbjct: 142 TVKIGDFGLATVK-SRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLY 200

Query: 121 EMLTGVQPRCGRSVDEIYDAVVRRQEIPP----IPSGLPPAVENVLLGCFEYDLRSRPLM 176
           E++TG  P    +  +    +V R  + P    + S  P A++ ++  C +     RPL 
Sbjct: 201 ELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLF 260

Query: 177 TDILRVFKSSQNSV 190
             IL   +    S+
Sbjct: 261 PQILASIELLARSL 274

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  117 bits (294), Expect = 4e-30
 Identities = 36/181 (19%), Positives = 66/181 (36%), Gaps = 8/181 (4%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           M++  GS  D + ++    L    +        QG+  LHS  ++  ++K  N +L+E  
Sbjct: 94  MEYCLGSASDLL-EVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG 152

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
              LGD G   ++       +     +GTP +MAPE       G    + D W    + I
Sbjct: 153 LVKLGDFGSASIM-------APANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 205

Query: 121 EMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
           E+     P    +       + + +              N +  C +   + RP    +L
Sbjct: 206 ELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLL 265

Query: 181 R 181
           +
Sbjct: 266 K 266

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (290), Expect = 5e-30
 Identities = 36/166 (21%), Positives = 63/166 (37%), Gaps = 10/166 (6%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG 75
           K  K        Y  +LA  +   HSK ++  ++KP N +L  A    + D G       
Sbjct: 99  KLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG-----WS 153

Query: 76  IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD 135
           +  PSS      GT +Y+ PE  +         + D W       E L G  P    +  
Sbjct: 154 VHAPSSRRTTLCGTLDYLPPEMIE---GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 210

Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
           E Y  + R +     P  +     +++    +++   RP++ ++L 
Sbjct: 211 ETYKRISRVE--FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 254

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (282), Expect = 7e-29
 Identities = 43/188 (22%), Positives = 73/188 (38%), Gaps = 4/188 (2%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
            +           +   G   L  + RYA+ +A+G+  L SK  +  +L   N +L   D
Sbjct: 89  TELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRD 148

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
              +GD G+   L            R     + APE  +       S  +D+W F  ++ 
Sbjct: 149 LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK---TRTFSHASDTWMFGVTLW 205

Query: 121 EMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
           EM T G +P  G +  +I   + +  E  P P   P  + NV++ C+ +    RP    +
Sbjct: 206 EMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 265

Query: 180 LRVFKSSQ 187
                 +Q
Sbjct: 266 RDFLLEAQ 273

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (269), Expect = 6e-27
 Identities = 33/180 (18%), Positives = 66/180 (36%), Gaps = 5/180 (2%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG 75
           +   +   N+      ++ G+  L     +  +L   N +L     A + D G+   L  
Sbjct: 100 QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 159

Query: 76  IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSV 134
                           + APE          S ++D W F   + E  + G +P  G   
Sbjct: 160 DENYYKAQTHGKWPVKWYAPECIN---YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 216

Query: 135 DEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDG 194
            E+    + + E    P+G P  + +++  C+ YD+ +RP    +    ++    V ++G
Sbjct: 217 SEVTAM-LEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNEG 275

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (268), Expect = 9e-27
 Identities = 36/193 (18%), Positives = 70/193 (36%), Gaps = 5/193 (2%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           M+   G    +    K  ++ +SNV      ++ G+  L  K  +  +L   N +L    
Sbjct: 87  MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRH 146

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
            A + D G+   L       +          + APE          S  +D W +  ++ 
Sbjct: 147 YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN---FRKFSSRSDVWSYGVTMW 203

Query: 121 EMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
           E L+ G +P       E+    + + +    P   PP +  ++  C+ Y    RP    +
Sbjct: 204 EALSYGQKPYKKMKGPEVMAF-IEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTV 262

Query: 180 LRVFKSSQNSVHS 192
            +  ++   S+ S
Sbjct: 263 EQRMRACYYSLAS 275

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (265), Expect = 2e-26
 Identities = 36/184 (19%), Positives = 65/184 (35%), Gaps = 6/184 (3%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           ++F  G   D +       L+ S +          +  LH   I+  +LK  N +     
Sbjct: 88  IEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDG 147

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV--RGPISFETDSWGFACS 118
              L D G+                 +GTP +MAPE    E     P  ++ D W    +
Sbjct: 148 DIKLADFGVSAKNTR---TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 204

Query: 119 IIEMLTGVQPRCGRSVDEIYDAVVRRQ-EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMT 177
           +IEM     P    +   +   + + +      PS      ++ L  C E ++ +R   +
Sbjct: 205 LIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTS 264

Query: 178 DILR 181
            +L+
Sbjct: 265 QLLQ 268

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (266), Expect = 3e-26
 Identities = 41/231 (17%), Positives = 84/231 (36%), Gaps = 8/231 (3%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
            +           +     +    +  + + +A+G+  L  + ++  +L   N ++    
Sbjct: 89  TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ 148

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
              + D G+  LL                  +MA E          + ++D W +  ++ 
Sbjct: 149 HVKITDFGLAKLLGAEE-KEYHAEGGKVPIKWMALESIL---HRIYTHQSDVWSYGVTVW 204

Query: 121 EMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
           E++T G +P  G    EI   ++ + E  P P      V  +++ C+  D  SRP   ++
Sbjct: 205 ELMTFGSKPYDGIPASEISS-ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 263

Query: 180 LRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGYTEWFLSKEDLKVDDVVRS 230
           +  F              G     LP  + S +    + +ED+  DDVV +
Sbjct: 264 IIEFSKMARDPQRYLVIQGDERMHLPSPTDSNFYRALMDEEDM--DDVVDA 312

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (260), Expect = 7e-26
 Identities = 29/182 (15%), Positives = 58/182 (31%), Gaps = 7/182 (3%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
            ++          +    +     +     D+ + +  L SK  L  +L   N ++N+  
Sbjct: 78  TEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQG 137

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
              + D G+   +L     SS          +  PE          S ++D W F   + 
Sbjct: 138 VVKVSDFGLSRYVLDDEYTSSV--GSKFPVRWSPPEVLM---YSKFSSKSDIWAFGVLMW 192

Query: 121 EMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
           E+ + G  P    +  E  + + +       P      V  ++  C+      RP    +
Sbjct: 193 EIYSLGKMPYERFTNSETAEHIAQGLR-LYRPHLASEKVYTIMYSCWHEKADERPTFKIL 251

Query: 180 LR 181
           L 
Sbjct: 252 LS 253

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (255), Expect = 3e-25
 Identities = 36/184 (19%), Positives = 70/184 (38%), Gaps = 11/184 (5%)

Query: 6   GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
           GS+ D +       L    + ++++D+ + +  L     +  +L   N +++E + A + 
Sbjct: 86  GSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVS 145

Query: 66  DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 124
           D G+          SS          + APE  +       S ++D W F   + E+ + 
Sbjct: 146 DFGLTKEA------SSTQDTGKLPVKWTAPEALR---EKKFSTKSDVWSFGILLWEIYSF 196

Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
           G  P     + ++    V +      P G PPAV  V+  C+  D   RP    +    +
Sbjct: 197 GRVPYPRIPLKDVVPR-VEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 255

Query: 185 SSQN 188
             + 
Sbjct: 256 HIKT 259

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  102 bits (256), Expect = 3e-25
 Identities = 42/189 (22%), Positives = 77/189 (40%), Gaps = 11/189 (5%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           M++ +G     +     G ++         D  Q +   H  GI+  ++KP N +++  +
Sbjct: 90  MEYVDGVTLRDIVH-TEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATN 148

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
              + D GI   +       +     +GT  Y++PEQ +      +   +D +   C + 
Sbjct: 149 AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR---GDSVDARSDVYSLGCVLY 205

Query: 121 EMLTGVQPRCGRSVDEIYDAVVRRQEIPP--IPSGLPPAVENVLLGCFEYDLRSRP---- 174
           E+LTG  P  G S   +    VR   IPP     GL   ++ V+L     +  +R     
Sbjct: 206 EVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAA 265

Query: 175 -LMTDILRV 182
            +  D++RV
Sbjct: 266 EMRADLVRV 274

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  101 bits (253), Expect = 8e-25
 Identities = 38/187 (20%), Positives = 64/187 (34%), Gaps = 12/187 (6%)

Query: 1   MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
               + G + D +   +   LS     +    L + I  LH   I+  +LKP N +L++ 
Sbjct: 89  FDLMKKGELFDYLT--EKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDD 146

Query: 60  DRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEV---RGPISFETDSWGFA 116
               L D G    L     P   L    GTP+Y+APE  +  +         E D W   
Sbjct: 147 MNIKLTDFGFSCQL----DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTG 202

Query: 117 CSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDLRSRP 174
             +  +L G  P   R    +   ++        P        V++++        + R 
Sbjct: 203 VIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRY 262

Query: 175 LMTDILR 181
              + L 
Sbjct: 263 TAEEALA 269

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (249), Expect = 3e-24
 Identities = 34/170 (20%), Positives = 68/170 (40%), Gaps = 13/170 (7%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVL--NLKPFNFILNEAD-RAVLGDVGIPHL 72
           +   + +  +  +   + +G+  LH++   ++  +LK  N  +        +GD+G+  L
Sbjct: 105 RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 164

Query: 73  LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG- 131
                  +S     +GTP +MAPE +            D + F   ++EM T   P    
Sbjct: 165 K-----RASFAKAVIGTPEFMAPEMY----EEKYDESVDVYAFGMCMLEMATSEYPYSEC 215

Query: 132 RSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
           ++  +IY  V    +         P V+ ++ GC   +   R  + D+L 
Sbjct: 216 QNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 265

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.5 bits (247), Expect = 4e-24
 Identities = 32/185 (17%), Positives = 68/185 (36%), Gaps = 3/185 (1%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
            ++ E    D+  + K G+ S+  +      +A G+  L +   +  +L   N ++N   
Sbjct: 88  TEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNL 147

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
              + D G+  +L   P  +           + APE          +  +D W F   + 
Sbjct: 148 VCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS---YRKFTSASDVWSFGIVMW 204

Query: 121 EMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
           E++T  +       +      +      P P   P A+  +++ C++ +   RP   DI+
Sbjct: 205 EVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIV 264

Query: 181 RVFKS 185
            +   
Sbjct: 265 SILDK 269

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.3 bits (247), Expect = 7e-24
 Identities = 37/182 (20%), Positives = 61/182 (33%), Gaps = 9/182 (4%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           M++  G  G     +    +    +     +  Q +  LHS  ++  ++K  N +L    
Sbjct: 96  MEYLAG--GSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG 153

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
              L D G       I    S     +GTP +MAPE      R     + D W      I
Sbjct: 154 SVKLTDFGFCAQ---ITPEQSKRSTMVGTPYWMAPEVVT---RKAYGPKVDIWSLGIMAI 207

Query: 121 EMLTGVQPRCGRSVDEIYDAVVRRQEIP-PIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
           EM+ G  P    +       +          P  L     + L  C + D+  R    ++
Sbjct: 208 EMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKEL 267

Query: 180 LR 181
           L+
Sbjct: 268 LQ 269

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.5 bits (245), Expect = 8e-24
 Identities = 36/167 (21%), Positives = 62/167 (37%), Gaps = 4/167 (2%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG 75
               +   +  R+   L  G++ LH  GI   ++KP N +L+E D   + D G+   +  
Sbjct: 96  PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL-ATVFR 154

Query: 76  IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS-V 134
                  L +  GT  Y+APE  +   R   +   D W     +  ML G  P    S  
Sbjct: 155 YNNRERLLNKMCGTLPYVAPELLKR--REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 212

Query: 135 DEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
            + Y     ++        +  A   +L      +  +R  + DI +
Sbjct: 213 CQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK 259

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.6 bits (245), Expect = 9e-24
 Identities = 34/180 (18%), Positives = 75/180 (41%), Gaps = 7/180 (3%)

Query: 6   GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
           GS+ D +    G KL+++ +   A  +A+G+  +  +  +  +L+  N ++++     + 
Sbjct: 92  GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIA 151

Query: 66  DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 124
           D G+  L+      + +  +      + APE       G  + ++D W F   + E++T 
Sbjct: 152 DFGLARLIEDNEYTAREGAK--FPIKWTAPEAIN---YGTFTIKSDVWSFGILLTEIVTH 206

Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
           G  P  G +  E+   + R       P   P  +  ++  C++     RP    +  V +
Sbjct: 207 GRIPYPGMTNPEVIQNLERGYR-MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.5 bits (247), Expect = 1e-23
 Identities = 30/169 (17%), Positives = 64/169 (37%), Gaps = 5/169 (2%)

Query: 18  GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP 77
             L+  ++  +A  +A+G+  L  K  +  +L   N ++       + D G+   ++   
Sbjct: 159 NVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDS 218

Query: 78  LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDE 136
                         +MAPE       G  + ++D W +   + E+ + GV P  G  VD 
Sbjct: 219 -NYVVRGNARLPVKWMAPESLF---EGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA 274

Query: 137 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 185
            +  +++       P      +  ++  C+ +D R RP   ++      
Sbjct: 275 NFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC 323

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.9 bits (243), Expect = 1e-23
 Identities = 40/186 (21%), Positives = 77/186 (41%), Gaps = 7/186 (3%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           M+           Q++   L L+++  YA  L+  +  L SK  +  ++   N +++  D
Sbjct: 86  MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND 145

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
              LGD G+   +       +   +      +MAPE          +  +D W F   + 
Sbjct: 146 CVKLGDFGLSRYMEDSTYYKAS--KGKLPIKWMAPESIN---FRRFTSASDVWMFGVCMW 200

Query: 121 EMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
           E+L  GV+P  G   +++   +    E  P+P   PP + +++  C+ YD   RP  T++
Sbjct: 201 EILMHGVKPFQGVKNNDVIGRI-ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 259

Query: 180 LRVFKS 185
                +
Sbjct: 260 KAQLST 265

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 98.6 bits (245), Expect = 3e-23
 Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 15/199 (7%)

Query: 1   MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFIL--N 57
           ++F   G + DR+A  +  K+S + V  Y     +G+  +H   I+ L++KP N +    
Sbjct: 105 LEFLSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETK 163

Query: 58  EADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFAC 117
           +A    + D G+   L     P   +     T  + APE      R P+ F TD W    
Sbjct: 164 KASSVKIIDFGLATKLN----PDEIVKVTTATAEFAAPEIVD---REPVGFYTDMWAIGV 216

Query: 118 SIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--IPSGLPPAVENVLLGCFEYDLRSRPL 175
               +L+G+ P  G    E    V R          S + P  ++ +    + + R R  
Sbjct: 217 LGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLT 276

Query: 176 MTDILR--VFKSSQNSVHS 192
           + D L     K   +++ S
Sbjct: 277 VHDALEHPWLKGDHSNLTS 295

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 98.6 bits (245), Expect = 3e-23
 Identities = 38/185 (20%), Positives = 66/185 (35%), Gaps = 11/185 (5%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN--E 58
            +F  G         +  K+S      Y   + +G+  +H    + L+LKP N +     
Sbjct: 102 YEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKR 161

Query: 59  ADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACS 118
           ++   L D G+   L     P   +    GT  + APE  +     P+ + TD W     
Sbjct: 162 SNELKLIDFGLTAHL----DPKQSVKVTTGTAEFAAPEVAE---GKPVGYYTDMWSVGVL 214

Query: 119 IIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--IPSGLPPAVENVLLGCFEYDLRSRPLM 176
              +L+G+ P  G + DE    V            SG+    ++ +      D  +R  +
Sbjct: 215 SYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTI 274

Query: 177 TDILR 181
              L 
Sbjct: 275 HQALE 279

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.6 bits (240), Expect = 4e-23
 Identities = 43/189 (22%), Positives = 74/189 (39%), Gaps = 15/189 (7%)

Query: 1   MKFYE-GSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKG-----ILVLNLKPF 52
           M++ E G +   + +   +   L    V R    L   + + H +      +L  +LKP 
Sbjct: 84  MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPA 143

Query: 53  NFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDS 112
           N  L+      LGD G+  +L      +S     +GTP YM+PEQ     R   + ++D 
Sbjct: 144 NVFLDGKQNVKLGDFGLARIL---NHDTSFAKAFVGTPYYMSPEQMN---RMSYNEKSDI 197

Query: 113 WGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 172
           W   C + E+   + P    S  E+   + R  +   IP      +  ++          
Sbjct: 198 WSLGCLLYELCALMPPFTAFSQKELAGKI-REGKFRRIPYRYSDELNEIITRMLNLKDYH 256

Query: 173 RPLMTDILR 181
           RP + +IL 
Sbjct: 257 RPSVEEILE 265

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.4 bits (239), Expect = 8e-23
 Identities = 34/183 (18%), Positives = 63/183 (34%), Gaps = 9/183 (4%)

Query: 3   FYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRA 62
             E      +A      LS   +  +A D+A+G+  L  K  +  +L   N ++ E   A
Sbjct: 107 VLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVA 166

Query: 63  VLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEM 122
            + D G+                      +MA E          +  +D W +   + E+
Sbjct: 167 KIADFGLSRG----QEVYVKKTMGRLPVRWMAIESLN---YSVYTTNSDVWSYGVLLWEI 219

Query: 123 LTGVQ-PRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
           ++    P CG +  E+Y+  + +      P      V +++  C+      RP    IL 
Sbjct: 220 VSLGGTPYCGMTCAELYEK-LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 278

Query: 182 VFK 184
              
Sbjct: 279 SLN 281

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 96.5 bits (239), Expect = 9e-23
 Identities = 36/176 (20%), Positives = 67/176 (38%), Gaps = 6/176 (3%)

Query: 10  DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGI 69
            R++      LS +     A  +A G+  L  +  +  +L   N ++ E     + D G+
Sbjct: 127 ARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGL 186

Query: 70  PHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQP 128
              +       +D         +M PE          + E+D W +   + E+ + G+QP
Sbjct: 187 SRNIYSADYYKAD-GNDAIPIRWMPPESIF---YNRYTTESDVWAYGVVLWEIFSYGLQP 242

Query: 129 RCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
             G + +E+   V R   I   P   P  + N++  C+      RP    I R+ +
Sbjct: 243 YYGMAHEEVIYYV-RDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQ 297

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 95.6 bits (237), Expect = 1e-22
 Identities = 39/190 (20%), Positives = 80/190 (42%), Gaps = 8/190 (4%)

Query: 6   GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
           G++ D + +    ++S   +   A  ++  +  L  K  +  +L   N ++ E     + 
Sbjct: 98  GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 157

Query: 66  DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 124
           D G+  L+ G    +           + APE          S ++D W F   + E+ T 
Sbjct: 158 DFGLSRLMTGDTYTAHA--GAKFPIKWTAPESLA---YNKFSIKSDVWAFGVLLWEIATY 212

Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
           G+ P  G  + ++Y+ ++ +      P G P  V  ++  C++++   RP   +I + F+
Sbjct: 213 GMSPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 271

Query: 185 S-SQNSVHSD 193
           +  Q S  SD
Sbjct: 272 TMFQESSISD 281

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.6 bits (237), Expect = 2e-22
 Identities = 31/187 (16%), Positives = 74/187 (39%), Gaps = 6/187 (3%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           + + +        + +    ++ ++  + + +A+G+  L SK  +  +L   N +L+E  
Sbjct: 108 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKF 167

Query: 61  RAVLGDVGIPHLLLGIPLPS-SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
              + D G+   +      S  +         +MA E  Q       + ++D W F   +
Sbjct: 168 TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ---TQKFTTKSDVWSFGVLL 224

Query: 120 IEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTD 178
            E++T G  P    +  +I   +++ +     P   P  +  V+L C+      RP  ++
Sbjct: 225 WELMTRGAPPYPDVNTFDITVYLLQGRR-LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSE 283

Query: 179 ILRVFKS 185
           ++    +
Sbjct: 284 LVSRISA 290

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.4 bits (234), Expect = 2e-22
 Identities = 30/185 (16%), Positives = 66/185 (35%), Gaps = 7/185 (3%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
            +F E        + + G  +   +    +D+ +G+  L    ++  +L   N ++ E  
Sbjct: 79  FEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQ 138

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
              + D G+   +  +    +          + +PE +        S ++D W F   + 
Sbjct: 139 VIKVSDFGMTRFV--LDDQYTSSTGTKFPVKWASPEVFS---FSRYSSKSDVWSFGVLMW 193

Query: 121 EMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 179
           E+ + G  P   RS  E+ + +         P      V  ++  C++     RP  + +
Sbjct: 194 EVFSEGKIPYENRSNSEVVEDISTGFR-LYKPRLASTHVYQIMNHCWKERPEDRPAFSRL 252

Query: 180 LRVFK 184
           LR   
Sbjct: 253 LRQLA 257

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.6 bits (234), Expect = 3e-22
 Identities = 33/172 (19%), Positives = 69/172 (40%), Gaps = 5/172 (2%)

Query: 15  LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL 74
           L    L+L ++  Y+  +A+G+  L S+  +  +L   N +L+E +   + D G+   + 
Sbjct: 126 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 185

Query: 75  GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ-PRCGRS 133
             P              +MAPE          + ++D W F   + E+ +    P  G  
Sbjct: 186 KDP-DYVRKGDARLPLKWMAPETIF---DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 241

Query: 134 VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 185
           +DE +   ++       P    P +   +L C+  +   RP  ++++    +
Sbjct: 242 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 293

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.9 bits (235), Expect = 4e-22
 Identities = 33/185 (17%), Positives = 69/185 (37%), Gaps = 5/185 (2%)

Query: 2   KFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADR 61
            F        + +     L L ++  ++  +A+G+  L SK  +  +L   N +L     
Sbjct: 124 SFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRI 183

Query: 62  AVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIE 121
             + D G+   +            R     +MAPE          +FE+D W +   + E
Sbjct: 184 TKICDFGLARDIKNDSNYVVKGNAR-LPVKWMAPESIF---NCVYTFESDVWSYGIFLWE 239

Query: 122 MLTGVQPRC-GRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
           + +       G  VD  +  +++       P   P  + +++  C++ D   RP    I+
Sbjct: 240 LFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 299

Query: 181 RVFKS 185
           ++ + 
Sbjct: 300 QLIEK 304

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.6 bits (232), Expect = 5e-22
 Identities = 37/181 (20%), Positives = 68/181 (37%), Gaps = 7/181 (3%)

Query: 6   GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
           GS+ D +    G  L L  +   A  +A G+  +     +  +L+  N ++ E     + 
Sbjct: 96  GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVA 155

Query: 66  DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT- 124
           D G+  L+      +           + APE       G  + ++D W F   + E+ T 
Sbjct: 156 DFGLARLIEDNEYTARQ--GAKFPIKWTAPEAAL---YGRFTIKSDVWSFGILLTELTTK 210

Query: 125 GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
           G  P  G    E+ D V R     P P   P ++ +++  C+  +   RP    +    +
Sbjct: 211 GRVPYPGMVNREVLDQVERGYR-MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 269

Query: 185 S 185
            
Sbjct: 270 D 270

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 93.7 bits (232), Expect = 7e-22
 Identities = 34/187 (18%), Positives = 71/187 (37%), Gaps = 7/187 (3%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
            +F E    D   +   G+ ++  +      +A G+  L     +  +L   N ++N   
Sbjct: 106 TEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNL 165

Query: 61  RAVLGDVGIPHLLL--GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACS 118
              + D G+   L         +          + APE  Q       +  +D W +   
Sbjct: 166 VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ---YRKFTSASDVWSYGIV 222

Query: 119 IIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMT 177
           + E+++ G +P    +  ++ +A+ +   +PP P   P A+  ++L C++ D   RP   
Sbjct: 223 MWEVMSYGERPYWDMTNQDVINAIEQDYRLPP-PMDCPSALHQLMLDCWQKDRNHRPKFG 281

Query: 178 DILRVFK 184
            I+    
Sbjct: 282 QIVNTLD 288

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.6 bits (229), Expect = 2e-21
 Identities = 35/169 (20%), Positives = 72/169 (42%), Gaps = 6/169 (3%)

Query: 18  GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP 77
              SLS + + A ++A G+  L++   +  +L   N ++ E     +GD G+   +    
Sbjct: 128 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 187

Query: 78  LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ-PRCGRSVDE 136
                  + L    +M+PE  +    G  +  +D W F   + E+ T  + P  G S ++
Sbjct: 188 Y-YRKGGKGLLPVRWMSPESLK---DGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 243

Query: 137 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 185
           +   V+    +   P   P  +  ++  C++Y+ + RP   +I+   K 
Sbjct: 244 VLRFVM-EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 291

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.6 bits (227), Expect = 3e-21
 Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 6/165 (3%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG 75
           K G    +    Y  ++   +  LH KGI+  +LKP N +LNE     + D G    +L 
Sbjct: 101 KIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK-VLS 159

Query: 76  IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD 135
                +     +GT  Y++PE             +D W   C I +++ G+ P    +  
Sbjct: 160 PESKQARANSFVGTAQYVSPELLT---EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEY 216

Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
            I+  +++ +     P    P   +++      D   R    ++ 
Sbjct: 217 LIFQKIIKLE--YDFPEKFFPKARDLVEKLLVLDATKRLGCEEME 259

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.1 bits (228), Expect = 4e-21
 Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 10/176 (5%)

Query: 6   GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG 65
           G +   +      K  LS    YA ++  G+  LHSKGI+  +LK  N +L++     + 
Sbjct: 88  GDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIA 145

Query: 66  DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG 125
           D G+        L  +      GTP+Y+APE          +   D W F   + EML G
Sbjct: 146 DFGMCKEN---MLGDAKTNTFCGTPDYIAPEILL---GQKYNHSVDWWSFGVLLYEMLIG 199

Query: 126 VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
             P  G+  +E++ ++  R + P  P  L    +++L+  F  +   R  +   +R
Sbjct: 200 QSPFHGQDEEELFHSI--RMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 253

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.2 bits (220), Expect = 3e-20
 Identities = 33/170 (19%), Positives = 65/170 (38%), Gaps = 6/170 (3%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG 75
              +LS  ++   A  +A+G+  L SK  +  +L   N ++ E +   + D G+   +  
Sbjct: 128 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 187

Query: 76  IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSV 134
           I               +MAPE          + ++D W F   + E+ T G  P  G  V
Sbjct: 188 IDYYKK-TTNGRLPVKWMAPEALF---DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 243

Query: 135 DEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 184
           +E++  +++       PS     +  ++  C+      RP    ++    
Sbjct: 244 EELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 292

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.9 bits (220), Expect = 4e-20
 Identities = 30/180 (16%), Positives = 65/180 (36%), Gaps = 12/180 (6%)

Query: 6   GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV-- 63
             + +R+      +L+   +  Y   + + +  LHS  I   +++P N I      +   
Sbjct: 86  LDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIK 144

Query: 64  LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEML 123
           + + G    L     P  +       P Y APE  Q      +S  TD W     +  +L
Sbjct: 145 IIEFGQARQLK----PGDNFRLLFTAPEYYAPEVHQ---HDVVSTATDMWSLGTLVYVLL 197

Query: 124 TGVQPRCGRSVDEIYDAVVRRQEIPP--IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
           +G+ P    +  +I + ++  +          +     + +      + +SR   ++ L+
Sbjct: 198 SGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.0 bits (220), Expect = 4e-20
 Identities = 35/191 (18%), Positives = 60/191 (31%), Gaps = 17/191 (8%)

Query: 1   MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M+  + G +  R+        +          + + I  LHS  I   ++KP N +    
Sbjct: 88  MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK 147

Query: 60  D---RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFA 116
                  L D G            + L     TP Y+APE   PE         D W   
Sbjct: 148 RPNAILKLTDFGFAKET----TSHNSLTTPCYTPYYVAPEVLGPE---KYDKSCDMWSLG 200

Query: 117 CSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------PIPSGLPPAVENVLLGCFEYDL 170
             +  +L G  P        I   +  R  +       P  S +   V+ ++    + + 
Sbjct: 201 VIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEP 260

Query: 171 RSRPLMTDILR 181
             R  +T+ + 
Sbjct: 261 TQRMTITEFMN 271

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 88.6 bits (219), Expect = 5e-20
 Identities = 39/187 (20%), Positives = 74/187 (39%), Gaps = 15/187 (8%)

Query: 1   MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           M+    G + DR+  ++ G  +  +  R    +   +  LH  GI+  +LKP N +    
Sbjct: 86  MQLVSGGELFDRI--VEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSL 143

Query: 60  D---RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFA 116
           D   + ++ D G+  +      P S L    GTP Y+APE      + P S   D W   
Sbjct: 144 DEDSKIMISDFGLSKMED----PGSVLSTACGTPGYVAPEVLA---QKPYSKAVDCWSIG 196

Query: 117 CSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDLRSRP 174
                +L G  P    +  ++++ +++ +     P    +  + ++ +    E D   R 
Sbjct: 197 VIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRF 256

Query: 175 LMTDILR 181
                L+
Sbjct: 257 TCEQALQ 263

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 87.6 bits (216), Expect = 8e-20
 Identities = 34/198 (17%), Positives = 59/198 (29%), Gaps = 16/198 (8%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           +    G   + +      K SL  V   A  +   I  +HSK  +  ++KP NF++    
Sbjct: 81  VMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGK 140

Query: 61  ---RAVLGDVGIPHLL----LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSW 113
                 + D G+            +P  +     GT  Y +            S   D  
Sbjct: 141 KGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHL---GIEQSRRDDLE 197

Query: 114 GFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE------IPPIPSGLPPAVENVLLGCFE 167
                ++    G  P  G           R  E      I  +  G P      L  C  
Sbjct: 198 SLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRS 257

Query: 168 YDLRSRPLMTDILRVFKS 185
                +P  + + ++F++
Sbjct: 258 LRFDDKPDYSYLRQLFRN 275

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 87.2 bits (215), Expect = 1e-19
 Identities = 30/200 (15%), Positives = 58/200 (29%), Gaps = 18/200 (9%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           +    G   + +  L G K S+  V   A  +   +  +H K ++  ++KP NF++   +
Sbjct: 79  VIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPN 138

Query: 61  RAVLGDVGIPHLLL---------GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETD 111
                 + +    +            +P  +     GT  YM+            S   D
Sbjct: 139 SKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHL---GREQSRRDD 195

Query: 112 SWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE------IPPIPSGLPPAVENVLLGC 165
                   +  L G  P  G           R  E      +  + +G P      +   
Sbjct: 196 LEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYA 255

Query: 166 FEYDLRSRPLMTDILRVFKS 185
                 + P    +  +F  
Sbjct: 256 RNLAFDATPDYDYLQGLFSK 275

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.9 bits (212), Expect = 2e-19
 Identities = 26/181 (14%), Positives = 57/181 (31%), Gaps = 14/181 (7%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           ++  E          + G L       +   + + +   H+ G+L  ++K  N +++   
Sbjct: 88  LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR 147

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
               G++ +     G  L  +      GT  Y  PE  +             W     + 
Sbjct: 148 ----GELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH--RYHGRSAAVWSLGILLY 201

Query: 121 EMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 180
           +M+ G  P          + ++R Q        +    ++++  C       RP   +I 
Sbjct: 202 DMVCGDIPFEH------DEEIIRGQ--VFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQ 253

Query: 181 R 181
            
Sbjct: 254 N 254

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.6 bits (211), Expect = 3e-19
 Identities = 35/183 (19%), Positives = 60/183 (32%), Gaps = 6/183 (3%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
           ++   G         +   L+      +   +  G+  LHS  I   +LKP N +L + +
Sbjct: 92  LELVAGGELFDFLA-EKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRN 150

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
                   I   L       ++     GTP ++APE        P+  E D W       
Sbjct: 151 VPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN---YEPLGLEADMWSIGVITY 207

Query: 121 EMLTGVQPRCGRSVDEIYDAVVRRQEIPP--IPSGLPPAVENVLLGCFEYDLRSRPLMTD 178
            +L+G  P  G +  E    V            S      ++ +      D + R  + D
Sbjct: 208 ILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQD 267

Query: 179 ILR 181
            L+
Sbjct: 268 SLQ 270

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.9 bits (212), Expect = 4e-19
 Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 11/163 (6%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADRAVLGDVGIPHLLL 74
           K G++    + + +I + +G+  L  K  I+  ++KP N ++N      L D G     +
Sbjct: 97  KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFG-----V 151

Query: 75  GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV 134
              L  S     +GT +YM+PE+ Q       S ++D W    S++EM  G  P      
Sbjct: 152 SGQLIDSMANSFVGTRSYMSPERLQ---GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDA 208

Query: 135 DEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMT 177
            E+   ++   ++    +  PP           Y + SRP M 
Sbjct: 209 KEL--ELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMA 249

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.0 bits (212), Expect = 4e-19
 Identities = 30/159 (18%), Positives = 65/159 (40%), Gaps = 8/159 (5%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG 75
           +    +      Y  ++   +  LHS+ ++  ++K  N +L++     + D G+    + 
Sbjct: 98  RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157

Query: 76  IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD 135
                + +    GTP Y+APE  +           D WG    + EM+ G  P   +  +
Sbjct: 158 ---DGATMKTFCGTPEYLAPEVLE---DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211

Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
            +++ ++  +     P  L P  +++L G  + D + R 
Sbjct: 212 RLFELILMEE--IRFPRTLSPEAKSLLAGLLKKDPKQRL 248

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 86.3 bits (213), Expect = 5e-19
 Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 11/176 (6%)

Query: 1   MKFYEGSVGDRMAQL-KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA 59
           +    G  GD    L + G  S +++  YA ++  G+  +H++ ++  +LKP N +L+E 
Sbjct: 86  LDLMNG--GDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEH 143

Query: 60  DRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
               + D+G     L            +GT  YMAPE  Q  V        D +   C +
Sbjct: 144 GHVRISDLG-----LACDFSKKKPHASVGTHGYMAPEVLQKGV--AYDSSADWFSLGCML 196

Query: 120 IEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-IPSGLPPAVENVLLGCFEYDLRSRP 174
            ++L G  P       + ++       +   +P    P + ++L G  + D+  R 
Sbjct: 197 FKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRL 252

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.5 bits (208), Expect = 1e-18
 Identities = 35/217 (16%), Positives = 67/217 (30%), Gaps = 34/217 (15%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS--------KGILVLNLKPF 52
             ++E   G     L    +++  + + A+  A G+  LH           I   +LK  
Sbjct: 80  SDYHEH--GSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 137

Query: 53  NFILNEADRAVLGDVGIPHLLLGIPLPSSDLP-RRLGTPNYMAPEQWQPEV---RGPISF 108
           N ++ +     + D+G+              P  R+GT  YMAPE     +         
Sbjct: 138 NILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFK 197

Query: 109 ETDSWGFACSIIEMLTGVQPRCGR---------------SVDEIYDAVVRRQEIPPIPSG 153
             D +       E+                         SV+E+   V  ++  P IP+ 
Sbjct: 198 RADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNR 257

Query: 154 L-----PPAVENVLLGCFEYDLRSRPLMTDILRVFKS 185
                    +  ++  C+  +  +R     I +    
Sbjct: 258 WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 82.4 bits (203), Expect = 5e-18
 Identities = 38/148 (25%), Positives = 60/148 (40%), Gaps = 11/148 (7%)

Query: 27  RYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSSDLPRR 86
            YA ++   +  LHSK I+  +LKP N +L++     + D G    +             
Sbjct: 108 FYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYV------PDVTYTL 161

Query: 87  LGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE 146
            GTP+Y+APE        P +   D W F   I EML G  P    +  + Y+ ++  + 
Sbjct: 162 CGTPDYIAPEVVS---TKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAE- 217

Query: 147 IPPIPSGLPPAVENVLLGCFEYDLRSRP 174
               P      V+++L      DL  R 
Sbjct: 218 -LRFPPFFNEDVKDLLSRLITRDLSQRL 244

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.2 bits (202), Expect = 7e-18
 Identities = 32/206 (15%), Positives = 65/206 (31%), Gaps = 32/206 (15%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
            +  +  +   + ++    +    +      L +G+  LHS  ++  +LKP N ++  + 
Sbjct: 94  FEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG 153

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
           +  L D G+  +       +S     + T  Y APE      +   +   D W   C   
Sbjct: 154 QIKLADFGLARIYSFQMALTS----VVVTLWYRAPEVLL---QSSYATPVDLWSVGCIFA 206

Query: 121 EMLTGVQPRCGRSVDEIYDAVVR-------------------------RQEIPPIPSGLP 155
           EM        G S  +    ++                           Q I    + + 
Sbjct: 207 EMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDID 266

Query: 156 PAVENVLLGCFEYDLRSRPLMTDILR 181
              +++LL C  ++   R      L 
Sbjct: 267 ELGKDLLLKCLTFNPAKRISAYSALS 292

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.2 bits (202), Expect = 9e-18
 Identities = 34/202 (16%), Positives = 63/202 (31%), Gaps = 31/202 (15%)

Query: 9   GDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG 68
            D    LK   LS  ++  +   + +G+  +HS  +L  +LKP N +LN      + D G
Sbjct: 95  ADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 154

Query: 69  IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
           +  +       +  L   + T  Y APE          +   D W   C + EML+    
Sbjct: 155 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK--GYTKSIDIWSVGCILAEMLSNRPI 212

Query: 129 RCGRSVDEIYDAVVRRQEIPP-----------------------------IPSGLPPAVE 159
             G+   +  + ++     P                              +         
Sbjct: 213 FPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL 272

Query: 160 NVLLGCFEYDLRSRPLMTDILR 181
           ++L     ++   R  +   L 
Sbjct: 273 DLLDKMLTFNPHKRIEVEQALA 294

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 80.2 bits (197), Expect = 5e-17
 Identities = 35/159 (22%), Positives = 58/159 (36%), Gaps = 11/159 (6%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG 75
           + G+ S  +   YA  +      LHS  ++  +LKP N ++++     + D G       
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF------ 187

Query: 76  IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD 135
                       GTP  +APE          +   D W     I EM  G  P       
Sbjct: 188 AKRVKGRTWTLCGTPEALAPEIIL---SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI 244

Query: 136 EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
           +IY+ +V  +     PS     ++++L    + DL  R 
Sbjct: 245 QIYEKIVSGK--VRFPSHFSSDLKDLLRNLLQVDLTKRF 281

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.1 bits (194), Expect = 7e-17
 Identities = 42/207 (20%), Positives = 68/207 (32%), Gaps = 32/207 (15%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
             F E  +   +       L+ S++  Y +   QG+  LH   IL  +LKP N +L+E  
Sbjct: 79  FDFMETDLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENG 137

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
              L D G+         P+     ++ T  Y APE              D W   C + 
Sbjct: 138 VLKLADFGLAKS---FGSPNRAYTHQVVTRWYRAPELLFG--ARMYGVGVDMWAVGCILA 192

Query: 121 EMLTGVQPRCGRSVDEIYDAVVRRQEIPP--------------------------IPSGL 154
           E+L  V    G S  +    +      P                           I S  
Sbjct: 193 ELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAA 252

Query: 155 PPAVENVLLGCFEYDLRSRPLMTDILR 181
              + +++ G F ++  +R   T  L+
Sbjct: 253 GDDLLDLIQGLFLFNPCARITATQALK 279

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.1 bits (194), Expect = 7e-17
 Identities = 34/161 (21%), Positives = 60/161 (37%), Gaps = 5/161 (3%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG 75
           +  + +   V  Y  ++   +  LH  GI+  ++K  N +L+     VL D G+      
Sbjct: 122 QRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF-- 179

Query: 76  IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD 135
           +   +       GT  YMAP+  +    G      D W     + E+LTG  P       
Sbjct: 180 VADETERAYDFCGTIEYMAPDIVRGGDSGH-DKAVDWWSLGVLMYELLTGASPFTVDGEK 238

Query: 136 EIYDAVVRR--QEIPPIPSGLPPAVENVLLGCFEYDLRSRP 174
                + RR  +  PP P  +    ++++      D + R 
Sbjct: 239 NSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRL 279

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 74.5 bits (182), Expect = 2e-15
 Identities = 36/193 (18%), Positives = 55/193 (28%), Gaps = 32/193 (16%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLG 75
             G L       + + L  GI   H + +L  +LKP N ++N      + D G+      
Sbjct: 93  CEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAF-- 150

Query: 76  IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD 135
             +P       + T  Y AP+          S   D W   C   EM+ G     G S  
Sbjct: 151 -GIPVRKYTHEIVTLWYRAPDVLMGS--KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA 207

Query: 136 EIYDAVVRRQEIPP---------------------------IPSGLPPAVENVLLGCFEY 168
           +    + R    P                               GL  +  ++L    + 
Sbjct: 208 DQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKL 267

Query: 169 DLRSRPLMTDILR 181
           D   R      L 
Sbjct: 268 DPNQRITAKQALE 280

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.4 bits (179), Expect = 5e-15
 Identities = 42/208 (20%), Positives = 61/208 (29%), Gaps = 32/208 (15%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
            +F    +   M       + L  +  Y   L QG+   HS  +L  +LKP N ++N   
Sbjct: 80  FEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 139

Query: 61  RAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSII 120
              L D G+        +P       + T  Y APE          S   D W   C   
Sbjct: 140 AIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEILLG--CKYYSTAVDIWSLGCIFA 194

Query: 121 EMLTGVQPRCGRSVDEIYDAVVR---------------------------RQEIPPIPSG 153
           EM+T      G S  +    + R                           RQ+   +   
Sbjct: 195 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 254

Query: 154 LPPAVENVLLGCFEYDLRSRPLMTDILR 181
           L     ++L     YD   R      L 
Sbjct: 255 LDEDGRSLLSQMLHYDPNKRISAKAALA 282

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.7 bits (172), Expect = 5e-14
 Identities = 36/212 (16%), Positives = 57/212 (26%), Gaps = 34/212 (16%)

Query: 1   MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD 60
             F E  +   ++     K +LS + R    L  G+  +H   IL  ++K  N ++    
Sbjct: 96  FDFCEHDLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG 154

Query: 61  RAVLGDVGIPHLL-LGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSI 119
              L D G+     L      +    R+ T  Y  PE    E         D WG  C +
Sbjct: 155 VLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGE--RDYGPPIDLWGAGCIM 212

Query: 120 IEMLTGVQPRCGRSVDEIYDAVVRRQEIPP------------------------------ 149
            EM T      G +       + +                                    
Sbjct: 213 AEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRL 272

Query: 150 IPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 181
                 P   +++      D   R    D L 
Sbjct: 273 KAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 304

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.2 bits (163), Expect = 8e-13
 Identities = 38/196 (19%), Positives = 63/196 (32%), Gaps = 37/196 (18%)

Query: 15  LKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLL 74
           +K  KL    +      + +G+  +H+ GI+  +LKP N  +NE     + D G+     
Sbjct: 113 MKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR--- 169

Query: 75  GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV 134
                 S++   + T  Y APE          +   D W   C + EM+TG     G   
Sbjct: 170 ---QADSEMTGYVVTRWYRAPEVILN--WMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH 224

Query: 135 DEIYDAVVRRQEIPP-----------------------------IPSGLPPAVENVLLGC 165
            +    +++    PP                             I +   P   N+L   
Sbjct: 225 LDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKM 284

Query: 166 FEYDLRSRPLMTDILR 181
              D   R    + L 
Sbjct: 285 LVLDAEQRVTAGEALA 300

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.7 bits (159), Expect = 2e-12
 Identities = 34/192 (17%), Positives = 58/192 (30%), Gaps = 33/192 (17%)

Query: 18  GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIP 77
           G L    V  +   L +G+   HS+ +L  +LKP N ++N      L + G+        
Sbjct: 96  GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARA---FG 152

Query: 78  LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRC-GRSVDE 136
           +P       + T  Y  P+          S   D W   C   E+    +P   G  VD+
Sbjct: 153 IPVRCYSAEVVTLWYRPPDVLFG--AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD 210

Query: 137 IYDAVVRRQEIPP---------------------------IPSGLPPAVENVLLGCFEYD 169
               + R    P                            +   L     ++L    + +
Sbjct: 211 QLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCN 270

Query: 170 LRSRPLMTDILR 181
              R    + L+
Sbjct: 271 PVQRISAEEALQ 282

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.2 bits (158), Expect = 4e-12
 Identities = 34/194 (17%), Positives = 56/194 (28%), Gaps = 34/194 (17%)

Query: 16  KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV-LGDVGIPHLLL 74
               L +  V  Y   L + +  +HS GI   ++KP N +L+     + L D G    L 
Sbjct: 115 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL- 173

Query: 75  GIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV 134
              +        + +  Y APE          +   D W   C + E+L G     G S 
Sbjct: 174 ---VRGEPNVSYICSRYYRAPELIFGAT--DYTSSIDVWSAGCVLAELLLGQPIFPGDSG 228

Query: 135 DEIYDAVVRRQEIPP---------------------------IPSGLPPAVENVLLGCFE 167
            +    +++    P                                 PP    +     E
Sbjct: 229 VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLE 288

Query: 168 YDLRSRPLMTDILR 181
           Y   +R    +   
Sbjct: 289 YTPTARLTPLEACA 302

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 63.7 bits (154), Expect = 1e-11
 Identities = 30/201 (14%), Positives = 61/201 (30%), Gaps = 43/201 (21%)

Query: 18  GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV-LGDVGIPHLLLGI 76
             L+  ++  Y  ++ + +   HS GI+  ++KP N +++   R + L D G+       
Sbjct: 124 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY--- 180

Query: 77  PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP-RCGRSVD 135
             P  +   R+ +  +  PE           +  D W   C +  M+   +P   G    
Sbjct: 181 -HPGQEYNVRVASRYFKGPELLVD--YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 237

Query: 136 EIYDAVVR-----------------------------------RQEIPPIPSGLPPAVEN 160
           +    + +                                   R         + P   +
Sbjct: 238 DQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALD 297

Query: 161 VLLGCFEYDLRSRPLMTDILR 181
            L     YD +SR    + + 
Sbjct: 298 FLDKLLRYDHQSRLTAREAME 318

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.5 bits (148), Expect = 7e-11
 Identities = 31/147 (21%), Positives = 51/147 (34%), Gaps = 7/147 (4%)

Query: 3   FYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRA 62
                +   + Q+   +L    +      +  GI  LHS GI+  +LKP N ++      
Sbjct: 99  LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 158

Query: 63  VLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEM 122
            + D G    L      S  +   + T  Y APE              D W   C + EM
Sbjct: 159 KILDFG----LARTAGTSFMMTPYVVTRYYRAPEVIL---GMGYKENVDIWSVGCIMGEM 211

Query: 123 LTGVQPRCGRSVDEIYDAVVRRQEIPP 149
           +       GR   + ++ V+ +   P 
Sbjct: 212 VRHKILFPGRDYIDQWNKVIEQLGTPC 238

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.3 bits (145), Expect = 2e-10
 Identities = 38/202 (18%), Positives = 62/202 (30%), Gaps = 37/202 (18%)

Query: 9   GDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVG 68
            D    +K  KL+  +V      + +G+  +HS  I+  +LKP N  +NE     + D G
Sbjct: 107 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 166

Query: 69  IPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP 128
           +            ++   + T  Y APE          +   D W   C + E+LTG   
Sbjct: 167 LARH------TDDEMTGYVATRWYRAPEIMLN--WMHYNQTVDIWSVGCIMAELLTGRTL 218

Query: 129 RCGRSVDEIYDAVVRRQEIPP-----------------------------IPSGLPPAVE 159
             G    +    ++R    P                              +  G  P   
Sbjct: 219 FPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAV 278

Query: 160 NVLLGCFEYDLRSRPLMTDILR 181
           ++L      D   R      L 
Sbjct: 279 DLLEKMLVLDSDKRITAAQALA 300

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.7 bits (130), Expect = 9e-09
 Identities = 30/149 (20%), Positives = 50/149 (33%), Gaps = 6/149 (4%)

Query: 10  DRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSK-GILVLNLKPFNFILNEADR-AVLGDV 67
             + + +   + L  V + +  L  G+  +H + GI+  ++KP N ++   D    L  +
Sbjct: 112 ALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQI 171

Query: 68  GIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ 127
            I  L                T  Y +PE        P     D W  AC I E++TG  
Sbjct: 172 KIADLGNACWYDEHYTNSI-QTREYRSPEVLL---GAPWGCGADIWSTACLIFELITGDF 227

Query: 128 PRCGRSVDEIYDAVVRRQEIPPIPSGLPP 156
                             +I  +   LP 
Sbjct: 228 LFEPDEGHSYTKDDDHIAQIIELLGELPS 256

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	503
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.98
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.98
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.98
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.98
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.97
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.97
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.97
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.97
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.97
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.97
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.97
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.97
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.97
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.96
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.94
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.15
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	89.39
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	85.33
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	84.46
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	81.41

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.6e-39  Score=319.75  Aligned_cols=194  Identities=18%  Similarity=0.302  Sum_probs=166.0

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+| +|.+++.  ..+.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...... .
T Consensus        87 mEy~~gg~L~~~~~--~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~-~  163 (288)
T d1uu3a_          87 LSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-K  163 (288)
T ss_dssp             ECCCTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred             EEccCCCCHHHhhh--ccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccceecccCC-c
Confidence            899995 9999887  45679999999999999999999999999999999999999999999999999998764321 1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      .......+||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.+..+++..+...  ...+|..++++++
T Consensus       164 ~~~~~~~~GT~~Y~APE~~~~~---~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~  238 (288)
T d1uu3a_         164 QARANSFVGTAQYVSPELLTEK---SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--EYDFPEKFFPKAR  238 (288)
T ss_dssp             ------CCCCGGGCCHHHHHTC---CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTT--CCCCCTTCCHHHH
T ss_pred             ccccccccCCccccCceeeccC---CCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcC--CCCCCccCCHHHH
Confidence            2223456899999999999854   6899999999999999999999999999988888887654  4567788999999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCCCCCc
Q 010713          160 NVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGHGSR  202 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~~~~~  202 (503)
                      +||.+||+.||.+|||+.|+++.-.-..|+|+++.+|..+..+
T Consensus       239 ~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~w~~l~~~  281 (288)
T d1uu3a_         239 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQ  281 (288)
T ss_dssp             HHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTGGGS
T ss_pred             HHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCCCHHHhhcC
Confidence            9999999999999999999877555556999999999988654

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-38  Score=311.50  Aligned_cols=187  Identities=25%  Similarity=0.371  Sum_probs=153.5

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+ |+|.+++.. ....+++.+++.++.||++||+|||+++|+||||||+|||++.++.+||+|||+++...... .
T Consensus        82 ~Ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~-~  159 (276)
T d1uwha_          82 TQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-G  159 (276)
T ss_dssp             EECCCEEEHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC-------
T ss_pred             EecCCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeeccccC-C
Confidence            79999 599999974 45679999999999999999999999999999999999999999999999999997654321 1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccC-CC---CCCCCCc
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IP---PIPSGLP  155 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~-~~---~~~~~~s  155 (503)
                      ........||+.|||||++.+...+.++.++|||||||++|||+||+.||.+.+............. .+   ..+..++
T Consensus       160 ~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  239 (276)
T d1uwha_         160 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP  239 (276)
T ss_dssp             ------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCC
T ss_pred             cccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccch
Confidence            2233456899999999999865556789999999999999999999999998766655544444332 22   2467889


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          156 PAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      +++.+||.+||+.||++|||+.++++.|+.+...
T Consensus       240 ~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~  273 (276)
T d1uwha_         240 KAMKRLMAECLKKKRDERPLFPQILASIELLARS  273 (276)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHc
Confidence            9999999999999999999999999999988654

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-37  Score=317.67  Aligned_cols=195  Identities=17%  Similarity=0.335  Sum_probs=172.4

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+ |+|.+++.  +.+.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+....   .
T Consensus        84 ~ey~~gg~L~~~~~--~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~---~  158 (337)
T d1o6la_          84 MEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS---D  158 (337)
T ss_dssp             EECCTTCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---T
T ss_pred             eeccCCCchhhhhh--cccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeeccccccccc---C
Confidence            79999 59999987  456799999999999999999999999999999999999999999999999999986543   1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      .......+||+.|+|||++.+.   .|+.++|+|||||++|||++|+.||.+.+..+++..+...  .+.+|..++++++
T Consensus       159 ~~~~~~~~GT~~Y~aPE~~~~~---~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~  233 (337)
T d1o6la_         159 GATMKTFCGTPEYLAPEVLEDN---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME--EIRFPRTLSPEAK  233 (337)
T ss_dssp             TCCBCCCEECGGGCCGGGGSSS---CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCTTSCHHHH
T ss_pred             CcccccceeCHHHhhhhhccCC---CCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcC--CCCCCccCCHHHH
Confidence            2334567899999999999854   6899999999999999999999999999999888887764  4567889999999


Q ss_pred             HHHHHhhhcCCCCCCC-----HHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRPL-----MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG  211 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS-----~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~  211 (503)
                      +||.+||+.||.+|++     +.|+++      |+|+...+|..+..+.+.+|..|.
T Consensus       234 dli~~~L~~dP~~R~~~~~~~~~eil~------Hp~f~~i~~~~l~~~~~~~p~~P~  284 (337)
T d1o6la_         234 SLLAGLLKKDPKQRLGGGPSDAKEVME------HRFFLSINWQDVVQKKLLPPFKPQ  284 (337)
T ss_dssp             HHHHHHTCSSTTTSTTCSTTTHHHHHT------SGGGTTCCHHHHHTTCSCCSCCCC
T ss_pred             HHHHhhccCCchhhcccccccHHHHHc------CcccccCCHHHHHhCCCCCCCCCC
Confidence            9999999999999995     788877      999999999988888887777654

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-37  Score=307.43  Aligned_cols=169  Identities=21%  Similarity=0.341  Sum_probs=151.5

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+ |+|.+++.  ..+.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....    
T Consensus        85 mEy~~~g~L~~~l~--~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~----  158 (263)
T d2j4za1          85 LEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS----  158 (263)
T ss_dssp             EECCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCC----
T ss_pred             EeecCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeecCC----
Confidence            89999 59999997  446799999999999999999999999999999999999999999999999999976532    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                       .......||+.|+|||++.+.   .++.++|||||||++|+|++|+.||.+.+..+.+..+..  ..+.+|..++++++
T Consensus       159 -~~~~~~~Gt~~Y~APE~~~~~---~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~--~~~~~p~~~s~~~~  232 (263)
T d2j4za1         159 -SRRTTLCGTLDYLPPEMIEGR---MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR--VEFTFPDFVTEGAR  232 (263)
T ss_dssp             -CCCEETTEEGGGCCHHHHTTC---CCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT--TCCCCCTTSCHHHH
T ss_pred             -CcccccCCCCcccCHHHHcCC---CCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHc--CCCCCCccCCHHHH
Confidence             223456799999999999864   688999999999999999999999999998888887765  34567788999999


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 010713          160 NVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +||.+||+.||++|||+.|+++
T Consensus       233 ~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         233 DLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHccCCHhHCcCHHHHHc
Confidence            9999999999999999999988

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5.7e-37  Score=309.85  Aligned_cols=192  Identities=24%  Similarity=0.345  Sum_probs=170.4

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+| +|.+++.  ....+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....    
T Consensus        83 mE~~~gg~l~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~----  156 (316)
T d1fota_          83 MDYIEGGELFSLLR--KSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----  156 (316)
T ss_dssp             ECCCCSCBHHHHHH--HTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS----
T ss_pred             eeecCCcccccccc--ccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEecc----
Confidence            899995 7888776  567789999999999999999999999999999999999999999999999999987643    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                        .....+||+.|+|||++.+.   .++.++|||||||++|+|++|+.||.+.+..+....+...  ...++..+++++.
T Consensus       157 --~~~~~~Gt~~Y~APE~l~~~---~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~  229 (316)
T d1fota_         157 --VTYTLCGTPDYIAPEVVSTK---PYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA--ELRFPPFFNEDVK  229 (316)
T ss_dssp             --CBCCCCSCTTTCCHHHHTTC---CBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC--CCCCCTTSCHHHH
T ss_pred             --ccccccCcccccCHHHHcCC---CCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcC--CCCCCCCCCHHHH
Confidence              23456899999999999854   6889999999999999999999999999999988888764  3456788999999


Q ss_pred             HHHHHhhhcCCCCCC-----CHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG  211 (503)
Q Consensus       160 ~LI~~cL~~DP~~RP-----S~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~  211 (503)
                      ++|.+||+.||.+|+     |+.++++      |+|+.+.+|..+..+...+|..|.
T Consensus       230 ~li~~~L~~dp~~R~~~~r~t~~~il~------Hp~f~~i~~~~l~~~~~~~p~~p~  280 (316)
T d1fota_         230 DLLSRLITRDLSQRLGNLQNGTEDVKN------HPWFKEVVWEKLLSRNIETPYEPP  280 (316)
T ss_dssp             HHHHHHTCSCTTTCTTSSTTTTHHHHT------SGGGSSCCHHHHHTTCSCCSCCCC
T ss_pred             HHHHHHhhhCHHhccccchhhHHHHHc------CcccccCCHHHHHhCCCCcCCCCC
Confidence            999999999999996     8999988      999999999988777777776654

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1e-36  Score=312.28  Aligned_cols=194  Identities=22%  Similarity=0.324  Sum_probs=171.4

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||+. |+|.+++.  ..+.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....    
T Consensus       120 ~e~~~~g~l~~~l~--~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~----  193 (350)
T d1rdqe_         120 MEYVAGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----  193 (350)
T ss_dssp             EECCTTCBHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS----
T ss_pred             cccccccchhhhHh--hcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeeccc----
Confidence            68888 48999886  446799999999999999999999999999999999999999999999999999987643    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                        ......||+.|||||++.+.   .++.++|||||||++|+|+||+.||.+.+....+..+...  .+.++..+++++.
T Consensus       194 --~~~~~~Gt~~Y~APE~~~~~---~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~  266 (350)
T d1rdqe_         194 --RTWTLCGTPEALAPEIILSK---GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG--KVRFPSHFSSDLK  266 (350)
T ss_dssp             --CBCCCEECGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCTTCCHHHH
T ss_pred             --ccccccCccccCCHHHHcCC---CCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcC--CCCCCccCCHHHH
Confidence              23456899999999999854   6889999999999999999999999999988888888764  4456788999999


Q ss_pred             HHHHHhhhcCCCCCC-----CHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCCc
Q 010713          160 NVLLGCFEYDLRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGYT  213 (503)
Q Consensus       160 ~LI~~cL~~DP~~RP-----S~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~~  213 (503)
                      +||.+||+.||.+|+     |+.++++      |+|+.+.+|..+..+.+++|..|...
T Consensus       267 ~li~~~L~~dP~kR~~~~r~t~~ell~------Hp~f~~~~~~~~~~~~~~~p~~p~~~  319 (350)
T d1rdqe_         267 DLLRNLLQVDLTKRFGNLKNGVNDIKN------HKWFATTDWIAIYQRKVEAPFIPKFK  319 (350)
T ss_dssp             HHHHHHSCSCTTTCTTSSTTTTHHHHT------SGGGTTCCHHHHHTTCSCCSCCCCCC
T ss_pred             HHHHHHhhhCHHhccccccccHHHHHc------CccccCCCHHHHHhcCCCcCccCCCC
Confidence            999999999999994     8999987      99999999998888878887776543

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.5e-37  Score=306.04  Aligned_cols=177  Identities=20%  Similarity=0.298  Sum_probs=153.3

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+| +|.+++.   .+.+++.+++.++.||+.||+|||++||+||||||+|||++.++++||+|||+++.....   
T Consensus        96 mEy~~gg~L~~~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~---  169 (293)
T d1yhwa1          96 MEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE---  169 (293)
T ss_dssp             EECCTTCBHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCST---
T ss_pred             EEecCCCcHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeeccc---
Confidence            899985 8988875   356999999999999999999999999999999999999999999999999999876432   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-CCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-EIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~-~~~~~~~~~s~~l  158 (503)
                      .......+||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+.+..+....+.... .....+..+++++
T Consensus       170 ~~~~~~~~gt~~Y~aPE~~~~~---~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  246 (293)
T d1yhwa1         170 QSKRSTMVGTPYWMAPEVVTRK---AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIF  246 (293)
T ss_dssp             TCCBCCCCSCGGGCCHHHHSSS---CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSSGGGSCHHH
T ss_pred             cccccccccCCCccChhhhcCC---CCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCCCcccCCHHH
Confidence            2233466899999999999854   68899999999999999999999999988777766665543 3345567899999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      ++||.+||+.||.+|||+.|+++      |+|+.
T Consensus       247 ~~li~~~L~~dP~~R~s~~eil~------Hp~~~  274 (293)
T d1yhwa1         247 RDFLNRCLDMDVEKRGSAKELLQ------HQFLK  274 (293)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHTT------CGGGG
T ss_pred             HHHHHHHccCChhHCcCHHHHhc------CHhhC
Confidence            99999999999999999999987      88775

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.1e-36  Score=313.71  Aligned_cols=197  Identities=18%  Similarity=0.311  Sum_probs=166.5

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+ |+|.+++.  ....+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+....    
T Consensus        86 mE~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~----  159 (364)
T d1omwa3          86 LDLMNGGDLHYHLS--QHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK----  159 (364)
T ss_dssp             ECCCCSCBHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSS----
T ss_pred             EEecCCCcHHHHHH--hcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeeceeeecCC----
Confidence            89999 59999997  456789999999999999999999999999999999999999999999999999987643    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHH-hccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV-RRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~-~~~~~~~~~~~~s~~l  158 (503)
                       .......||+.|+|||++...  ..++.++|||||||++|+|+||+.||.+.+..+...... .......++..+++++
T Consensus       160 -~~~~~~~GT~~y~APE~~~~~--~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  236 (364)
T d1omwa3         160 -KKPHASVGTHGYMAPEVLQKG--VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPEL  236 (364)
T ss_dssp             -SCCCSCCSCGGGCCHHHHSTT--CCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCCCCCSSSCHHH
T ss_pred             -CcccccccccccchhHHhhcC--CCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHH
Confidence             233456899999999999642  258899999999999999999999998765443332222 2234455678899999


Q ss_pred             HHHHHHhhhcCCCCCCC-----HHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCC
Q 010713          159 ENVLLGCFEYDLRSRPL-----MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGY  212 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS-----~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~  212 (503)
                      ++||.+||+.||.+|||     +.|+++      |+|+.+.+|..+..+..++|..|..
T Consensus       237 ~~li~~~L~~dP~~R~t~~~~~a~eil~------Hp~f~~i~~~~~~~~~~~~p~~p~~  289 (364)
T d1omwa3         237 RSLLEGLLQRDVNRRLGCLGRGAQEVKE------SPFFRSLDWQMVFLQKYPPPLIPPR  289 (364)
T ss_dssp             HHHHHHHTCSSTTTSTTTSSSTHHHHHT------SGGGTTCCHHHHHTTCSCCSCCCCC
T ss_pred             HHHHHHHcccCHHHhCCCcccCHHHHHc------CccccCCCHHHHhcCCCCcCcCCCC
Confidence            99999999999999999     688888      9999999999888887877776643

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.1e-37  Score=301.54  Aligned_cols=174  Identities=24%  Similarity=0.386  Sum_probs=143.5

Q ss_pred             CcCCCC-CHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-----CeecccCCCcEEEccCCcEEEEecCCccc
Q 010713            1 MKFYEG-SVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKG-----ILVLNLKPFNFILNEADRAVLGDVGIPHL   72 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~--~~~~Ls~~~vl~i~~QIl~aL~yLHs~g-----IvHrDLKP~NILld~~~~vKL~DFGla~~   72 (503)
                      ||||+| +|.+++...  ....+++.+++.++.||+.||+|||++|     |+||||||+|||++.++.+||+|||+++.
T Consensus        84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~  163 (269)
T d2java1          84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI  163 (269)
T ss_dssp             EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred             EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence            899985 999998753  3578999999999999999999999976     99999999999999999999999999987


Q ss_pred             ccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCC
Q 010713           73 LLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS  152 (503)
Q Consensus        73 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~  152 (503)
                      ....   ........||+.|+|||++.+.   .++.++|||||||++|||+||+.||.+.+..++...+... ..+.++.
T Consensus       164 ~~~~---~~~~~~~~gt~~Y~APE~l~~~---~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~-~~~~~~~  236 (269)
T d2java1         164 LNHD---TSFAKAFVGTPYYMSPEQMNRM---SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG-KFRRIPY  236 (269)
T ss_dssp             C--------------CCCSCCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT-CCCCCCT
T ss_pred             cccC---CCccccCCCCcccCCHHHHcCC---CCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcC-CCCCCCc
Confidence            6431   2223457899999999999754   6899999999999999999999999999988888877654 3446778


Q ss_pred             CCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          153 GLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       153 ~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      .+++++.+||.+||+.||.+|||+.|+++
T Consensus       237 ~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         237 RYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            89999999999999999999999999987

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-37  Score=309.99  Aligned_cols=195  Identities=24%  Similarity=0.374  Sum_probs=167.9

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+| +|.+++.  ....+++.+++.++.||+.||+|||++||+||||||+|||++.++++||+|||+++.....   
T Consensus        82 mEy~~~g~L~~~i~--~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~---  156 (320)
T d1xjda_          82 MEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG---  156 (320)
T ss_dssp             EECCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT---
T ss_pred             EeecCCCcHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhhcccc---
Confidence            799995 9999997  4567999999999999999999999999999999999999999999999999999765431   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVE  159 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~  159 (503)
                      ........||+.|+|||++.+.   .++.++|||||||++|+|++|+.||.+.+..+++..+..  ..+.+|..+++++.
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~--~~~~~p~~~s~~~~  231 (320)
T d1xjda_         157 DAKTNTFCGTPDYIAPEILLGQ---KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM--DNPFYPRWLEKEAK  231 (320)
T ss_dssp             TCCBCCCCSCGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--CCCCCCTTSCHHHH
T ss_pred             cccccccCCCCCcCCHHHHcCC---CCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHc--CCCCCCccCCHHHH
Confidence            2333456899999999999854   689999999999999999999999999999988888865  34677888999999


Q ss_pred             HHHHHhhhcCCCCCCCHH-HHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCC
Q 010713          160 NVLLGCFEYDLRSRPLMT-DILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG  211 (503)
Q Consensus       160 ~LI~~cL~~DP~~RPS~~-elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~  211 (503)
                      +||.+||+.||.+||++. ++++      |+|+.+.+|..+..+.+++|..|.
T Consensus       232 dli~~~L~~dP~~R~s~~~~l~~------hpff~~~~~~~l~~~~~~pp~~p~  278 (320)
T d1xjda_         232 DLLVKLFVREPEKRLGVRGDIRQ------HPLFREINWEELERKEIDPPFRPK  278 (320)
T ss_dssp             HHHHHHSCSSGGGSBTTBSCGGG------SGGGTTCCHHHHHTTCSCC-----
T ss_pred             HHHHHhcccCCCCCcCHHHHHHh------CchhccCCHHHHHhcCCCCCCCCC
Confidence            999999999999999985 6766      999999999887777777776654

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.4e-36  Score=302.16  Aligned_cols=178  Identities=21%  Similarity=0.356  Sum_probs=144.7

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEc---cCCcEEEEecCCcccccCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN---EADRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld---~~~~vKL~DFGla~~~~~~   76 (503)
                      ||||+ |+|.+++.  ..+.+++.++..++.||+.||+|||++||+||||||+|||+.   .++.+||+|||+++.... 
T Consensus        86 mE~~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~-  162 (307)
T d1a06a_          86 MQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-  162 (307)
T ss_dssp             ECCCCSCBHHHHHH--TCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC---------
T ss_pred             EeccCCCcHHHhhh--cccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccC-
Confidence            89998 59999996  567899999999999999999999999999999999999995   468999999999976543 


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC--CCCCCC
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP--PIPSGL  154 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~--~~~~~~  154 (503)
                         .......+||+.|+|||++.+.   .++.++|||||||++|+|++|..||.+....+....+.......  +.+..+
T Consensus       163 ---~~~~~~~~GT~~y~APE~~~~~---~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  236 (307)
T d1a06a_         163 ---GSVLSTACGTPGYVAPEVLAQK---PYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI  236 (307)
T ss_dssp             -------------CTTSCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTS
T ss_pred             ---CCeeeeeeeCccccCcHHHcCC---CCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCC
Confidence               2233456899999999999854   68999999999999999999999999999888888887755443  344689


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      ++++.+||.+||+.||++|||+.|+++      |+|+..
T Consensus       237 s~~~~~li~~~L~~dP~~R~s~~eil~------hp~~~~  269 (307)
T d1a06a_         237 SDSAKDFIRHLMEKDPEKRFTCEQALQ------HPWIAG  269 (307)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHH------STTTTS
T ss_pred             CHHHHHHHHHHccCCHhHCcCHHHHhc------CHhhCC
Confidence            999999999999999999999999998      888764

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.1e-36  Score=304.87  Aligned_cols=173  Identities=21%  Similarity=0.292  Sum_probs=151.1

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      ||||+|++.+.+.. ....+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....     
T Consensus        94 ~E~~~~g~l~~~~~-~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~-----  167 (309)
T d1u5ra_          94 MEYCLGSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-----  167 (309)
T ss_dssp             EECCSEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-----
T ss_pred             EEecCCCchHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCC-----
Confidence            79999754444432 457899999999999999999999999999999999999999999999999999976532     


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHHHH
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVEN  160 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l~~  160 (503)
                        .....||+.|||||++.+...+.|+.++|||||||++|+|++|..||.+.+..+....+.........+..+++++.+
T Consensus       168 --~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~  245 (309)
T d1u5ra_         168 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRN  245 (309)
T ss_dssp             --BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSCHHHHH
T ss_pred             --CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCCCCCCHHHHH
Confidence              235679999999999976545678999999999999999999999999988888888877766555566779999999


Q ss_pred             HHHHhhhcCCCCCCCHHHHHH
Q 010713          161 VLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       161 LI~~cL~~DP~~RPS~~elL~  181 (503)
                      ||.+||+.||.+|||+.|+++
T Consensus       246 li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         246 FVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             HHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHCcCChhHCcCHHHHHh
Confidence            999999999999999999987

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-36  Score=301.24  Aligned_cols=183  Identities=19%  Similarity=0.332  Sum_probs=151.1

Q ss_pred             CcCCC-CCHHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEE
Q 010713            1 MKFYE-GSVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG   65 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~--------------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~   65 (503)
                      ||||+ |+|.+++....              ...+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+
T Consensus        97 ~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~~~~Kl~  176 (299)
T d1ywna1          97 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC  176 (299)
T ss_dssp             EECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEEC
T ss_pred             EEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECCCCcEEEc
Confidence            79998 69999997532              2458999999999999999999999999999999999999999999999


Q ss_pred             ecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHhc
Q 010713           66 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG-VQPRCGRSVDEIYDAVVRR  144 (503)
Q Consensus        66 DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG-~~Pf~~~~~~e~~~~i~~~  144 (503)
                      |||+|+...... .........||+.|+|||++.+.   .++.++|||||||++|||+|+ .+||.+....+.+......
T Consensus       177 DFGla~~~~~~~-~~~~~~~~~gt~~y~APE~l~~~---~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~  252 (299)
T d1ywna1         177 DFGLARDIYKDP-DYVRKGDARLPLKWMAPETIFDR---VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE  252 (299)
T ss_dssp             C------CCSCT-TSCCTTSCCCGGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHH
T ss_pred             cCcchhhccccc-cccccCceeeCccccchhHhhcC---CCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhc
Confidence            999997654322 12233456799999999999744   689999999999999999986 5688887766666666666


Q ss_pred             cCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhc
Q 010713          145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQ  187 (503)
Q Consensus       145 ~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~  187 (503)
                      ...+..+..+++++.+||.+||+.||++|||+.|+++.|+.+.
T Consensus       253 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~il  295 (299)
T d1ywna1         253 GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  295 (299)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            6778888999999999999999999999999999999998774

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-36  Score=302.00  Aligned_cols=183  Identities=19%  Similarity=0.272  Sum_probs=158.9

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+| +|.+++.. ....+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++........
T Consensus        87 mE~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~  165 (285)
T d1u59a_          87 MEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY  165 (285)
T ss_dssp             EECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred             EEeCCCCcHHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhcccccccc
Confidence            899995 99998853 4567999999999999999999999999999999999999999999999999999876543333


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........||+.|+|||++...   .++.++|||||||++|||+| |..||.+.+..++...+.. ...++.|..+++++
T Consensus       166 ~~~~~~~~gt~~y~aPE~~~~~---~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~-~~~~~~p~~~~~~l  241 (285)
T d1u59a_         166 YTARSAGKWPLKWYAPECINFR---KFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ-GKRMECPPECPPEL  241 (285)
T ss_dssp             ECCCCSSCCCGGGCCHHHHHHC---EECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHT-TCCCCCCTTCCHHH
T ss_pred             cccccccccCccccChHHHhCC---CCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCCCCCCCcCCHHH
Confidence            3334456789999999999743   68999999999999999998 9999999888877776654 45667888999999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      .+||.+||+.||++|||+.++++.|+....
T Consensus       242 ~~li~~cl~~~p~~RPs~~~i~~~L~~~~~  271 (285)
T d1u59a_         242 YALMSDCWIYKWEDRPDFLTVEQRMRACYY  271 (285)
T ss_dssp             HHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            999999999999999999999999887644

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-36  Score=298.60  Aligned_cols=174  Identities=20%  Similarity=0.355  Sum_probs=147.8

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecccCCCcEEEc-cCCcEEEEecCCcccccCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKG--ILVLNLKPFNFILN-EADRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~g--IvHrDLKP~NILld-~~~~vKL~DFGla~~~~~~   76 (503)
                      ||||+| +|.+++..  ...+++.+++.++.||+.||+|||+++  |+||||||+|||++ .++.+||+|||+++.... 
T Consensus        91 mE~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~-  167 (270)
T d1t4ha_          91 TELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA-  167 (270)
T ss_dssp             EECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT-
T ss_pred             EeCCCCCcHHHHHhc--cccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccC-
Confidence            799985 99999973  467999999999999999999999999  99999999999996 478999999999976432 


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHhccCCCCCCCCCc
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVVRRQEIPPIPSGLP  155 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~-~~e~~~~i~~~~~~~~~~~~~s  155 (503)
                          .......||+.|+|||++.+    .++.++|||||||++|+|++|+.||.+.. ..++...+......+.++..++
T Consensus       168 ----~~~~~~~GT~~Y~aPE~~~~----~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~  239 (270)
T d1t4ha_         168 ----SFAKAVIGTPEFMAPEMYEE----KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAI  239 (270)
T ss_dssp             ----TSBEESCSSCCCCCGGGGGT----CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCC
T ss_pred             ----CccCCcccCccccCHHHhCC----CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCcccCccCC
Confidence                22345689999999999863    58999999999999999999999998754 4445555554444445667789


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcC
Q 010713          156 PAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVH  191 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~  191 (503)
                      +++++||.+||+.||++|||+.|+++      |+|+
T Consensus       240 ~~~~~li~~~l~~dp~~R~s~~ell~------Hp~f  269 (270)
T d1t4ha_         240 PEVKEIIEGCIRQNKDERYSIKDLLN------HAFF  269 (270)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHT------SGGG
T ss_pred             HHHHHHHHHHccCCHhHCcCHHHHhC------Cccc
Confidence            99999999999999999999999988      7765

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-36  Score=307.31  Aligned_cols=181  Identities=17%  Similarity=0.301  Sum_probs=155.4

Q ss_pred             CcCCC-CCHHHHHHhhcC---------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEcc
Q 010713            1 MKFYE-GSVGDRMAQLKG---------------------GKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE   58 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~---------------------~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~   58 (503)
                      ||||+ |+|.+++.....                     ..+++.+++.++.||+.||+|||+++|+||||||+|||++.
T Consensus       120 ~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~  199 (325)
T d1rjba_         120 FEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTH  199 (325)
T ss_dssp             EECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEET
T ss_pred             EEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhcccccc
Confidence            79998 599999975321                     35899999999999999999999999999999999999999


Q ss_pred             CCcEEEEecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHH
Q 010713           59 ADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEI  137 (503)
Q Consensus        59 ~~~vKL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~  137 (503)
                      ++.+||+|||+|+...... .........||+.|||||++.+.   .++.++|||||||++|||+| |..||.+.+..+.
T Consensus       200 ~~~~Kl~DFGla~~~~~~~-~~~~~~~~~gt~~y~aPE~l~~~---~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~  275 (325)
T d1rjba_         200 GKVVKICDFGLARDIMSDS-NYVVRGNARLPVKWMAPESLFEG---IYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN  275 (325)
T ss_dssp             TTEEEECCCGGGSCGGGCT-TSEEETTEEECGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred             CCeEEEeeccccccccCCC-ceeeeccccCCCccCChHHHcCC---CCCcceeccchhHHHHHHHhCCCCCCCCCCHHHH
Confidence            9999999999997654321 11122345689999999999743   78999999999999999998 8999998877777


Q ss_pred             HHHHHhccCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHh
Q 010713          138 YDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS  185 (503)
Q Consensus       138 ~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~  185 (503)
                      +..+......++.|..+++++.+||.+||+.||++|||+.||++.|..
T Consensus       276 ~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  323 (325)
T d1rjba_         276 FYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC  323 (325)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHhC
Confidence            777777777788889999999999999999999999999999998864

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.6e-37  Score=302.24  Aligned_cols=181  Identities=21%  Similarity=0.268  Sum_probs=149.0

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+| +|.+++.  ..+.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+...... .
T Consensus        82 mEy~~gg~L~~~l~--~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~-~  158 (271)
T d1nvra_          82 LEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-R  158 (271)
T ss_dssp             EECCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETT-E
T ss_pred             EeccCCCcHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeeccCC-c
Confidence            899995 9999985  56789999999999999999999999999999999999999999999999999998764322 1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD-EIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      .......+||+.|||||++.+..  .++.++|||||||++|+|++|+.||...... ..+...............+++++
T Consensus       159 ~~~~~~~~GT~~Y~APE~~~~~~--~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  236 (271)
T d1nvra_         159 ERLLNKMCGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP  236 (271)
T ss_dssp             ECCBCCCCSCGGGSCTHHHHCSS--BCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCHHH
T ss_pred             cccccceeeCcCccCHhHhcCCC--CCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCCHHH
Confidence            22234578999999999997541  2467899999999999999999999765443 33333333333333446789999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      .+||.+||+.||++|||+.|+++      |+|++
T Consensus       237 ~~li~~~L~~dP~~R~t~~eil~------hpwf~  264 (271)
T d1nvra_         237 LALLHKILVENPSARITIPDIKK------DRWYN  264 (271)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHTT------CTTTT
T ss_pred             HHHHHHHcCCChhHCcCHHHHhc------CHhhC
Confidence            99999999999999999999987      88875

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-36  Score=299.44  Aligned_cols=180  Identities=18%  Similarity=0.276  Sum_probs=154.5

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+| +|.+++.  ....+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++........
T Consensus        86 mE~~~~g~L~~~l~--~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~  163 (277)
T d1xbba_          86 MEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY  163 (277)
T ss_dssp             EECCTTEEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE
T ss_pred             EEcCCCCcHHHHHh--hccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhccccccc
Confidence            799985 9999987  4677999999999999999999999999999999999999999999999999999876443222


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........||+.|+|||++.+.   .++.++|||||||++|||+| |+.||.+.+..++...+.. ...++.|..+++++
T Consensus       164 ~~~~~~~~gt~~y~APE~l~~~---~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~-~~~~~~p~~~~~~~  239 (277)
T d1xbba_         164 YKAQTHGKWPVKWYAPECINYY---KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK-GERMGCPAGCPREM  239 (277)
T ss_dssp             EEC----CCCGGGCCHHHHHHC---EEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-TCCCCCCTTCCHHH
T ss_pred             cccccccCCCceecCchhhcCC---CCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHc-CCCCCCCcccCHHH
Confidence            2233455789999999999743   68899999999999999998 8999999888877766654 45677888999999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhh
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSS  186 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i  186 (503)
                      .+||.+||+.||++|||+.++++.|+..
T Consensus       240 ~~li~~cl~~dp~~RPs~~~i~~~L~~~  267 (277)
T d1xbba_         240 YDLMNLCWTYDVENRPGFAAVELRLRNY  267 (277)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCHhHCcCHHHHHHHhhCH
Confidence            9999999999999999999999887754

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-36  Score=302.96  Aligned_cols=182  Identities=20%  Similarity=0.297  Sum_probs=154.5

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+| +|.+++.. ..+.+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||++......   
T Consensus        88 mEy~~~g~L~~~~~~-~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~---  163 (288)
T d2jfla1          88 IEFCAGGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT---  163 (288)
T ss_dssp             EECCTTEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHH---
T ss_pred             EecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCCC---
Confidence            899985 89988764 4567999999999999999999999999999999999999999999999999998754321   


Q ss_pred             CCCCCCccCCCCCCCccccCCC--CCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccC-CCCCCCCCcH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPE--VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IPPIPSGLPP  156 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~--~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~-~~~~~~~~s~  156 (503)
                      ........||+.|+|||++...  ....|+.++|||||||++|+|++|+.||.+.+..+.+..+..... ....+..+++
T Consensus       164 ~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~  243 (288)
T d2jfla1         164 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSS  243 (288)
T ss_dssp             HHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCCSSGGGSCH
T ss_pred             cccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCccccCCH
Confidence            1122356899999999998532  234688999999999999999999999999888888877776442 2344578899


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          157 AVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      ++.+||.+||+.||++|||+.|+++      |+|++
T Consensus       244 ~~~~li~~~L~~dp~~R~t~~ell~------hp~~~  273 (288)
T d2jfla1         244 NFKDFLKKCLEKNVDARWTTSQLLQ------HPFVT  273 (288)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHTT------SGGGC
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhc------CcccC
Confidence            9999999999999999999999987      78775

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=7.8e-36  Score=299.00  Aligned_cols=183  Identities=19%  Similarity=0.324  Sum_probs=146.8

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+| +|.+++.. ..+.+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++........
T Consensus       106 ~Ey~~~g~L~~~~~~-~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~  184 (299)
T d1jpaa_         106 TEFMENGSLDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD  184 (299)
T ss_dssp             EECCTTEEHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred             EEecCCCcceeeecc-ccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcccceEccCCCCc
Confidence            799995 89988864 4567999999999999999999999999999999999999999999999999999876432211


Q ss_pred             C--CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcH
Q 010713           80 S--SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPP  156 (503)
Q Consensus        80 ~--~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~  156 (503)
                      .  .......+|+.|+|||++.+   +.++.++|||||||++|||+| |..||.+.+..++...+.. ...++.+..+++
T Consensus       185 ~~~~~~~~~~~t~~y~aPE~~~~---~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~-~~~~~~~~~~~~  260 (299)
T d1jpaa_         185 PTYTSALGGKIPIRWTAPEAIQY---RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ-DYRLPPPMDCPS  260 (299)
T ss_dssp             -----------CGGGSCHHHHHS---CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT-TCCCCCCTTCCH
T ss_pred             ceeeecccccCCccccCHHHHhc---CCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCCCCCCccchH
Confidence            1  11223457899999999974   378999999999999999998 8999999998888877755 345667888999


Q ss_pred             HHHHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          157 AVENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       157 ~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      .+.+||.+||+.||++|||+.++++.|+.+..
T Consensus       261 ~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~  292 (299)
T d1jpaa_         261 ALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR  292 (299)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence            99999999999999999999999999987643

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.3e-36  Score=293.09  Aligned_cols=181  Identities=18%  Similarity=0.324  Sum_probs=146.5

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+ |+|.+++.. ....+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++......  
T Consensus        79 ~E~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~--  155 (263)
T d1sm2a_          79 FEFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ--  155 (263)
T ss_dssp             EECCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC-----------
T ss_pred             EEecCCCcHHHHhhc-cccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchheeccCCC--
Confidence            79998 699999864 45678999999999999999999999999999999999999999999999999997764322  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........||+.|+|||++.+.   .++.++|||||||++|||+| |.+||...+..++...+.. ...+..|..+++++
T Consensus       156 ~~~~~~~~gt~~y~aPE~l~~~---~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~-~~~~~~p~~~~~~l  231 (263)
T d1sm2a_         156 YTSSTGTKFPVKWASPEVFSFS---RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST-GFRLYKPRLASTHV  231 (263)
T ss_dssp             ---------CTTSCCHHHHTTC---CCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHH-TCCCCCCTTSCHHH
T ss_pred             ceeecceecCcccCChHHhcCC---CCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHh-cCCCCCccccCHHH
Confidence            1222345789999999999854   68999999999999999999 5777777777777776655 45566788899999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      .+||.+||+.||++|||+.++++.|+++.+
T Consensus       232 ~~li~~cl~~~p~~Rps~~~il~~L~~i~e  261 (263)
T d1sm2a_         232 YQIMNHCWKERPEDRPAFSRLLRQLAEIAE  261 (263)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence            999999999999999999999999998754

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.8e-36  Score=298.29  Aligned_cols=181  Identities=19%  Similarity=0.336  Sum_probs=153.3

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+ |+|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......  
T Consensus        92 ~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~--  169 (287)
T d1opja_          92 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--  169 (287)
T ss_dssp             EECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSS--
T ss_pred             eecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEccccceeecCCCC--
Confidence            79998 699999987667789999999999999999999999999999999999999999999999999998754321  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCC-CCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP-RCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~P-f~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........|++.|+|||++.+.   .++.++|||||||++|||++|..| |.+.+..++... ......++.+..+++++
T Consensus       170 ~~~~~~~~g~~~y~aPE~~~~~---~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~l  245 (287)
T d1opja_         170 YTAHAGAKFPIKWTAPESLAYN---KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPEKV  245 (287)
T ss_dssp             SEEETTEEECGGGCCHHHHHHC---CCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH-HHTTCCCCCCTTCCHHH
T ss_pred             ceeeccccccccccChHHHcCC---CCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHH-HhcCCCCCCCccchHHH
Confidence            1112334578999999998743   689999999999999999996655 555555555544 44456677888999999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQ  187 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~  187 (503)
                      .+||.+||+.||++|||+.++++.|+.+.
T Consensus       246 ~~li~~cl~~dP~~Rps~~ei~~~L~~~~  274 (287)
T d1opja_         246 YELMRACWQWNPSDRPSFAEIHQAFETMF  274 (287)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            99999999999999999999999998764

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-36  Score=297.38  Aligned_cols=186  Identities=22%  Similarity=0.306  Sum_probs=155.6

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC----cEEEEecCCcccccC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD----RAVLGDVGIPHLLLG   75 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~----~vKL~DFGla~~~~~   75 (503)
                      ||||+ |+|.+++..  .+.+++.+++.++.||+.||+|||++||+||||||+|||++.++    .+||+|||++.....
T Consensus        92 ~E~~~gg~L~~~i~~--~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~  169 (293)
T d1jksa_          92 LELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF  169 (293)
T ss_dssp             EECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTT
T ss_pred             EEcCCCccccchhcc--ccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCC
Confidence            79998 599999974  45799999999999999999999999999999999999998776    599999999987643


Q ss_pred             CCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC--CCCC
Q 010713           76 IPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--IPSG  153 (503)
Q Consensus        76 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~--~~~~  153 (503)
                          ........||+.|+|||++.+.   .++.++|||||||++|+|++|+.||.+.+..+.+..+.......+  .+..
T Consensus       170 ----~~~~~~~~~t~~y~APE~~~~~---~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~  242 (293)
T d1jksa_         170 ----GNEFKNIFGTPEFVAPEIVNYE---PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN  242 (293)
T ss_dssp             ----SCBCSCCCCCGGGCCHHHHTTC---CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTT
T ss_pred             ----CccccccCCCCcccCHHHHcCC---CCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCC
Confidence                2233456889999999999854   688999999999999999999999999999888888776543322  3367


Q ss_pred             CcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCCCCC
Q 010713          154 LPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGHGS  201 (503)
Q Consensus       154 ~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~~~~  201 (503)
                      +++.+++||.+||+.||.+|||+.|+++      |+|+...+|.....
T Consensus       243 ~s~~~~~li~~~L~~dP~~R~s~~eil~------hp~~~~~~~~~~l~  284 (293)
T d1jksa_         243 TSALAKDFIRRLLVKDPKKRMTIQDSLQ------HPWIKPKDTQQALS  284 (293)
T ss_dssp             SCHHHHHHHHTTSCSSGGGSCCHHHHHH------STTTCC--------
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHhc------CcccCCCChhHhhc
Confidence            8999999999999999999999999998      99999888766543

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=1.4e-35  Score=303.73  Aligned_cols=185  Identities=22%  Similarity=0.340  Sum_probs=159.0

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEcc--CCcEEEEecCCcccccCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE--ADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~--~~~vKL~DFGla~~~~~~~   77 (503)
                      ||||+ |+|.+++.. ..+.+++.+++.++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++....  
T Consensus       102 mE~~~gg~L~~~l~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~--  178 (350)
T d1koaa2         102 YEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP--  178 (350)
T ss_dssp             ECCCCSCBHHHHHTC-TTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCT--
T ss_pred             EEcCCCCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheeccc--
Confidence            89998 599999864 4567999999999999999999999999999999999999964  57899999999987643  


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC--CCCCCc
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--IPSGLP  155 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~--~~~~~s  155 (503)
                        ........||+.|||||++.+.   .++.++|||||||++|+|++|..||.+.+..+.+..+.......+  ....++
T Consensus       179 --~~~~~~~~gT~~Y~aPEv~~~~---~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s  253 (350)
T d1koaa2         179 --KQSVKVTTGTAEFAAPEVAEGK---PVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGIS  253 (350)
T ss_dssp             --TSCEEEECSCTTTCCHHHHHTC---CBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCC
T ss_pred             --ccccceecCcccccCHHHHcCC---CCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCC
Confidence              2233456899999999999854   688999999999999999999999999999888888876554332  235689


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCCCC
Q 010713          156 PAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGH  199 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~~~  199 (503)
                      +++++||.+||+.||++|||+.|+++      |+|+....+...
T Consensus       254 ~~~~~li~~~L~~dP~~R~t~~eil~------hp~~~~~~~~~~  291 (350)
T d1koaa2         254 EDGKDFIRKLLLADPNTRMTIHQALE------HPWLTPGNAPGR  291 (350)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHHH------STTTSCTTCCSC
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhc------CcccCCCCCCCc
Confidence            99999999999999999999999998      999987766543

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-36  Score=295.28  Aligned_cols=180  Identities=19%  Similarity=0.325  Sum_probs=153.5

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+ |+|.+++.......+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++......  
T Consensus        86 ~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~--  163 (272)
T d1qpca_          86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE--  163 (272)
T ss_dssp             EECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC--
T ss_pred             EEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeeccccceEEccCCc--
Confidence            79998 699998865555679999999999999999999999999999999999999999999999999998764322  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG-VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG-~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........||+.|+|||++..   +.++.++|||||||++|||+|| .+||...+..+....+.. ...+..|..+++++
T Consensus       164 ~~~~~~~~gt~~y~APE~~~~---~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~-~~~~~~p~~~~~~l  239 (272)
T d1qpca_         164 YTAREGAKFPIKWTAPEAINY---GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER-GYRMVRPDNCPEEL  239 (272)
T ss_dssp             EECCTTCCCCTTTSCHHHHHH---CEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-TCCCCCCTTCCHHH
T ss_pred             cccccccCCcccccChHHHhC---CCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHh-cCCCCCcccChHHH
Confidence            122335578999999999974   3688999999999999999995 556667777777666654 45666788999999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhh
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSS  186 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i  186 (503)
                      .+||.+||+.||++|||+.++++.|+..
T Consensus       240 ~~li~~cl~~~P~~Rpt~~ei~~~L~~~  267 (272)
T d1qpca_         240 YQLMRLCWKERPEDRPTFDYLRSVLEDF  267 (272)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCHhHCcCHHHHHHHhhhh
Confidence            9999999999999999999999988764

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-35  Score=292.45  Aligned_cols=183  Identities=19%  Similarity=0.313  Sum_probs=145.4

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||.+ +|.+++.. ....+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++........
T Consensus        88 ~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~  166 (283)
T d1mqba_          88 TEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA  166 (283)
T ss_dssp             EECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC----------
T ss_pred             EEecccCcchhhhhc-ccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccchhhcccCCCcc
Confidence            789986 67777654 5678999999999999999999999999999999999999999999999999999876443222


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG-VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG-~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........||+.|+|||++.+.   .++.++|||||||++|||+++ .+|+...+..++...+. ....++.+..++..+
T Consensus       167 ~~~~~~~~gt~~Y~APE~l~~~---~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~l  242 (283)
T d1mqba_         167 TYTTSGGKIPIRWTAPEAISYR---KFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIN-DGFRLPTPMDCPSAI  242 (283)
T ss_dssp             -------CCCGGGSCHHHHHSC---CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH-TTCCCCCCTTCBHHH
T ss_pred             ceEeccCCCCccccCHHHHccC---CCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHh-ccCCCCCchhhHHHH
Confidence            2233345689999999999744   789999999999999999995 55566666666665554 455677788999999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      .+||.+||+.||++|||+.|+++.|+.+..
T Consensus       243 ~~li~~cl~~~p~~RPt~~eil~~L~~l~~  272 (283)
T d1mqba_         243 YQLMMQCWQQERARRPKFADIVSILDKLIR  272 (283)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHCcCCHhHCcCHHHHHHHHHHHhh
Confidence            999999999999999999999999987754

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2e-35  Score=291.90  Aligned_cols=183  Identities=22%  Similarity=0.398  Sum_probs=149.0

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+| +|.+++.  ..+.+++.+++.++.||+.||+|||++||+||||||+|||++.++..+++|||.+.........
T Consensus        90 mE~~~g~~L~~~~~--~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~  167 (277)
T d1o6ya_          90 MEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS  167 (277)
T ss_dssp             EECCCEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC-----
T ss_pred             EECCCCCEehhhhc--ccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhhhcccccc
Confidence            899995 8998886  4567999999999999999999999999999999999999999999999999998765443333


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC--CCCCCcHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--IPSGLPPA  157 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~--~~~~~s~~  157 (503)
                      ........||+.|+|||++.+.   .++.++|||||||++|+|+||+.||.+.+..+....+......++  ....+|++
T Consensus       168 ~~~~~~~~Gt~~Y~aPE~~~~~---~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  244 (277)
T d1o6ya_         168 VTQTAAVIGTAQYLSPEQARGD---SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSAD  244 (277)
T ss_dssp             -----------TTCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSCCHH
T ss_pred             ccccccccCcccccCHHHHcCC---CCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhccCCCHH
Confidence            3344567899999999999754   689999999999999999999999999988888777776544332  34679999


Q ss_pred             HHHHHHHhhhcCCCCCC-CHHHHHHHHHhhcc
Q 010713          158 VENVLLGCFEYDLRSRP-LMTDILRVFKSSQN  188 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RP-S~~elL~~L~~i~~  188 (503)
                      +.+||.+||+.||.+|| |+.++++.|.++++
T Consensus       245 l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~n  276 (277)
T d1o6ya_         245 LDAVVLKALAKNPENRYQTAAEMRADLVRVHN  276 (277)
T ss_dssp             HHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHC
T ss_pred             HHHHHHHHccCCHhHCHhHHHHHHHHHHHHhC
Confidence            99999999999999999 89999999887753

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.9e-35  Score=290.94  Aligned_cols=183  Identities=17%  Similarity=0.247  Sum_probs=156.2

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      ||||+|++.++........+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....    .
T Consensus        94 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~~----~  169 (305)
T d1blxa_          94 FEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF----Q  169 (305)
T ss_dssp             EECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCG----G
T ss_pred             EEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchhhhhhhcc----c
Confidence            689998777777665778899999999999999999999999999999999999999999999999999876432    2


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC-------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-------------  147 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~-------------  147 (503)
                      .......||+.|+|||++.+.   +++.++|||||||++|||++|+.||.+.+..+....+......             
T Consensus       170 ~~~~~~~gT~~Y~APE~~~~~---~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  246 (305)
T d1blxa_         170 MALTSVVVTLWYRAPEVLLQS---SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP  246 (305)
T ss_dssp             GGGCCCCCCCTTCCHHHHTTC---CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSC
T ss_pred             ccCCCcccChhhcCcchhcCC---CCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccch
Confidence            233567899999999999854   7899999999999999999999999999888877776542111             


Q ss_pred             ------------CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCC
Q 010713          148 ------------PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGW  196 (503)
Q Consensus       148 ------------~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w  196 (503)
                                  ..++..+++.+.+||.+||++||++|||+.|+++      |+|+.+.++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~------Hpff~~i~~  301 (305)
T d1blxa_         247 RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS------HPYFQDLER  301 (305)
T ss_dssp             GGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT------SGGGTTCCC
T ss_pred             hhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhc------ChhhcCchh
Confidence                        1133567899999999999999999999999988      999887654

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-35  Score=293.79  Aligned_cols=183  Identities=26%  Similarity=0.409  Sum_probs=158.3

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+ |+|.+++.. ..+.+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||+++........
T Consensus        89 ~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~  167 (273)
T d1u46a_          89 TELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH  167 (273)
T ss_dssp             EECCTTCBHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCE
T ss_pred             eeeecCcchhhhhhc-ccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccchhhhhcccCCCc
Confidence            78998 589988875 4567999999999999999999999999999999999999999999999999999876543322


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........++..|+|||.+.+.   .++.++|||||||++|||+| |..||.+.+..+....+......++.+..+++.+
T Consensus       168 ~~~~~~~~~~~~~~aPE~~~~~---~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l  244 (273)
T d1u46a_         168 YVMQEHRKVPFAWCAPESLKTR---TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDI  244 (273)
T ss_dssp             EEC-----CCGGGCCHHHHHHC---EEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHH
T ss_pred             ceecCccccCcccCCHHHHhCC---CCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCCCcccccHHH
Confidence            2223345678899999999854   68899999999999999998 8999999999999988888777788889999999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQ  187 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~  187 (503)
                      .+||.+||+.||++|||+.+|++.|++.+
T Consensus       245 ~~li~~cl~~dp~~RPt~~ei~~~L~~~~  273 (273)
T d1u46a_         245 YNVMVQCWAHKPEDRPTFVALRDFLLEAQ  273 (273)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             HHHHHHHcCCChhHCcCHHHHHHHHHhcC
Confidence            99999999999999999999999998753

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.4e-36  Score=301.90  Aligned_cols=177  Identities=22%  Similarity=0.392  Sum_probs=142.1

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecccCCCcEEEccCCcEEEEecCCcccccCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs-~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~   78 (503)
                      ||||+| +|.+++.+  .+.+++.++..++.||+.||+|||+ +||+||||||+|||++.++.+||+|||+|.....   
T Consensus        83 mEy~~gg~L~~~l~~--~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~---  157 (322)
T d1s9ja_          83 MEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---  157 (322)
T ss_dssp             EECCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH---
T ss_pred             EEcCCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCC---
Confidence            799995 99999974  4679999999999999999999997 5999999999999999999999999999986532   


Q ss_pred             CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHH--------------------
Q 010713           79 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIY--------------------  138 (503)
Q Consensus        79 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~--------------------  138 (503)
                        ......+||+.|+|||++.+.   +|+.++|||||||++|||++|+.||.+.+..+..                    
T Consensus       158 --~~~~~~~GT~~Y~APEvl~~~---~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (322)
T d1s9ja_         158 --SMANSFVGTRSYMSPERLQGT---HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRT  232 (322)
T ss_dssp             --HTC---CCSSCCCCHHHHHCS---CCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-----------------
T ss_pred             --CccccccCCccccCchHHcCC---CCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccc
Confidence              223456899999999999854   6899999999999999999999999765432211                    


Q ss_pred             ----------------------HHHHhccCCCCCC-CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCC
Q 010713          139 ----------------------DAVVRRQEIPPIP-SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDG  194 (503)
Q Consensus       139 ----------------------~~i~~~~~~~~~~-~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~  194 (503)
                                            ..+. ....+..+ ..++.++.+||.+||..||.+|||+.|+++      |+|+...
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~------Hpf~~~~  304 (322)
T d1s9ja_         233 PGRPLSSYGMDSRPPMAIFELLDYIV-NEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV------HAFIKRS  304 (322)
T ss_dssp             -------------CCCCHHHHHHHHH-TSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHT------SHHHHHH
T ss_pred             ccccccccccccccchhHHHHHhhhh-ccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhh------CHhhCcC
Confidence                                  0011 11111222 346889999999999999999999999998      6665443

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-34  Score=289.28  Aligned_cols=182  Identities=23%  Similarity=0.277  Sum_probs=151.8

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      ||||+|++...+.. ....+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....   .
T Consensus        79 mE~~~~~~~~~~~~-~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~---~  154 (299)
T d1ua2a_          79 FDFMETDLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP---N  154 (299)
T ss_dssp             EECCSEEHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC---C
T ss_pred             hhhhcchHHhhhhh-cccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccCCC---c
Confidence            79999866666543 5677999999999999999999999999999999999999999999999999999765432   2


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC-----------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-----------  149 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~-----------  149 (503)
                      ......+||+.|+|||++...  ..++.++|||||||++|+|++|..||.+.+..+....+......+.           
T Consensus       155 ~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~  232 (299)
T d1ua2a_         155 RAYTHQVVTRWYRAPELLFGA--RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLP  232 (299)
T ss_dssp             CCCCCSCCCCTTCCHHHHTTC--SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSST
T ss_pred             ccccceecChhhccHHHHccC--CCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccc
Confidence            233456899999999998643  2578999999999999999999999999988888777654321110           


Q ss_pred             ---------------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCC
Q 010713          150 ---------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDG  194 (503)
Q Consensus       150 ---------------~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~  194 (503)
                                     ....+++++.+||.+||+.||++|||+.|+++      |+|+.+.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~------Hp~f~~~  286 (299)
T d1ua2a_         233 DYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK------MKYFSNR  286 (299)
T ss_dssp             TCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT------SGGGTSS
T ss_pred             hhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC------CHhhCCC
Confidence                           01356899999999999999999999999988      8888753

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-35  Score=288.92  Aligned_cols=181  Identities=22%  Similarity=0.405  Sum_probs=147.0

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+ |+|.+++.. ....+++.+++.++.||+.||+|||+++|+||||||+||+++.++.+||+|||+++......  
T Consensus        86 ~E~~~~g~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~--  162 (273)
T d1mp8a_          86 MELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST--  162 (273)
T ss_dssp             EECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-------------
T ss_pred             EEeccCCcHHhhhhc-cCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhheeccCCc--
Confidence            79998 488887764 56779999999999999999999999999999999999999999999999999997654321  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........||+.|+|||++.+.   .++.++|||||||++|||++ |.+||.+.+..+++..+... ..++++..+++++
T Consensus       163 ~~~~~~~~gt~~y~apE~l~~~---~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~  238 (273)
T d1mp8a_         163 YYKASKGKLPIKWMAPESINFR---RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG-ERLPMPPNCPPTL  238 (273)
T ss_dssp             --------CCGGGCCHHHHHHC---CCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT-CCCCCCTTCCHHH
T ss_pred             ceeccceecCcccchhhHhccC---CCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-CCCCCCCCCCHHH
Confidence            2223345688999999999743   78999999999999999998 89999999988888877653 4567888999999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      .+||.+||+.||++|||+.||++.|+.+..
T Consensus       239 ~~li~~cl~~dp~~Rps~~ei~~~L~~i~~  268 (273)
T d1mp8a_         239 YSLMTKCWAYDPSRRPRFTELKAQLSTILE  268 (273)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            999999999999999999999999988753

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=4.3e-35  Score=300.37  Aligned_cols=179  Identities=24%  Similarity=0.357  Sum_probs=155.5

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEc--cCCcEEEEecCCcccccCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN--EADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld--~~~~vKL~DFGla~~~~~~~   77 (503)
                      ||||+ |+|.+.+.. ...++++.+++.++.||+.||+|||++||+||||||+|||++  .++.+||+|||++.....  
T Consensus       105 mE~~~gg~L~~~~~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~--  181 (352)
T d1koba_         105 LEFLSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP--  181 (352)
T ss_dssp             EECCCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT--
T ss_pred             EEcCCCChHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCC--
Confidence            89999 599888753 455799999999999999999999999999999999999997  568999999999987643  


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC--CCCCCCc
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP--PIPSGLP  155 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~--~~~~~~s  155 (503)
                        ........||+.|+|||++.+.   .++.++|||||||++|+|+||..||.+.+..+.+..+.......  ..+..++
T Consensus       182 --~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s  256 (352)
T d1koba_         182 --DEIVKVTTATAEFAAPEIVDRE---PVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVS  256 (352)
T ss_dssp             --TSCEEEECSSGGGCCHHHHTTC---CBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSC
T ss_pred             --CCceeeccCcccccCHHHHcCC---CCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCC
Confidence              2233456899999999999854   68999999999999999999999999999988888887655432  2446799


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          156 PAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      +++.+||.+||+.||.+|||+.|+++      |+|+..
T Consensus       257 ~~~~~li~~~L~~dp~~R~s~~eil~------Hp~~~~  288 (352)
T d1koba_         257 PEAKDFIKNLLQKEPRKRLTVHDALE------HPWLKG  288 (352)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHT------STTTSS
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhc------CHhhCC
Confidence            99999999999999999999999988      888765

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=6.6e-35  Score=289.37  Aligned_cols=180  Identities=20%  Similarity=0.231  Sum_probs=155.3

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+ |+|.+++..  .+.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....    
T Consensus        89 mE~~~~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~----  162 (277)
T d1phka_          89 FDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP----  162 (277)
T ss_dssp             EECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT----
T ss_pred             EEcCCCchHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccchheeEccC----
Confidence            89998 599999974  56799999999999999999999999999999999999999999999999999987643    


Q ss_pred             CCCCCCccCCCCCCCccccCCC---CCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC--CCCCC
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPE---VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--IPSGL  154 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~---~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~--~~~~~  154 (503)
                      ........||+.|+|||.+.+.   ....++.++||||+||++|+|++|+.||.+.+..+....+.......+  ....+
T Consensus       163 ~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  242 (277)
T d1phka_         163 GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDY  242 (277)
T ss_dssp             TCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGS
T ss_pred             CCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCcccccC
Confidence            2223456899999999998631   133578899999999999999999999999998888888877654333  33579


Q ss_pred             cHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          155 PPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       155 s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      |+++++||.+||+.||++|||+.|+++      |+|+.
T Consensus       243 s~~~~~li~~~L~~~p~~R~s~~eil~------h~~~~  274 (277)
T d1phka_         243 SDTVKDLVSRFLVVQPQKRYTAEEALA------HPFFQ  274 (277)
T ss_dssp             CHHHHHHHHHHCCSSGGGSCCHHHHTT------SGGGC
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHHc------CHHHH
Confidence            999999999999999999999999988      77765

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-35  Score=294.61  Aligned_cols=182  Identities=18%  Similarity=0.325  Sum_probs=152.6

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||. |+|.+.+.. ....+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....... 
T Consensus        89 ~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-  166 (317)
T d1xkka_          89 TQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK-  166 (317)
T ss_dssp             EECCTTCBHHHHHHH-TSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC-
T ss_pred             EEeccCCcccccccc-cccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccceecccccc-
Confidence            45665 699998875 567899999999999999999999999999999999999999999999999999987643221 


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........||+.|+|||++.+.   .++.++|||||||++|||+| |.+||.+.+..++...+.. ...++.+..+++++
T Consensus       167 ~~~~~~~~gt~~y~APE~l~~~---~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~-~~~~~~p~~~~~~~  242 (317)
T d1xkka_         167 EYHAEGGKVPIKWMALESILHR---IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK-GERLPQPPICTIDV  242 (317)
T ss_dssp             --------CCTTTSCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHH-TCCCCCCTTBCHHH
T ss_pred             cccccccccCccccChHHHhcC---CCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc-CCCCCCCcccCHHH
Confidence            2222345689999999999744   68999999999999999998 8999998888777665544 45667788999999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      .+||.+||+.||.+|||+.|+++.|+.+..
T Consensus       243 ~~li~~cl~~dP~~RPs~~eil~~l~~~~~  272 (317)
T d1xkka_         243 YMIMVKCWMIDADSRPKFRELIIEFSKMAR  272 (317)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCChhhCcCHHHHHHHHHHHHh
Confidence            999999999999999999999999887754

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-34  Score=283.01  Aligned_cols=178  Identities=16%  Similarity=0.233  Sum_probs=155.5

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||++ |+|.+++.. ....+++..+++++.||++||+|||++||+||||||+||+++.++.+||+|||+++......  
T Consensus        78 ~Ey~~~g~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~--  154 (258)
T d1k2pa_          78 TEYMANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--  154 (258)
T ss_dssp             EECCTTEEHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSS--
T ss_pred             EEccCCCcHHHhhhc-cccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheeccCCC--
Confidence            79998 688888764 45679999999999999999999999999999999999999999999999999997654322  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........+|+.|+|||.+.+.   .++.++|||||||++|||+| |+.||.+.+..++...+.. ...+..|..+++++
T Consensus       155 ~~~~~~~~~t~~y~aPE~~~~~---~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~-~~~~~~p~~~~~~l  230 (258)
T d1k2pa_         155 YTSSVGSKFPVRWSPPEVLMYS---KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ-GLRLYRPHLASEKV  230 (258)
T ss_dssp             CCCCCCSCCCGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHT-TCCCCCCTTCCHHH
T ss_pred             ceeecccCCCCCcCCcHHhcCC---CCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHh-CCCCCCcccccHHH
Confidence            2233346789999999999844   68999999999999999998 8999999998888877765 44667888999999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHh
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKS  185 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~  185 (503)
                      .+||.+||+.||++|||+.++++.|.+
T Consensus       231 ~~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         231 YTIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             HHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             HHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence            999999999999999999999998864

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-34  Score=285.85  Aligned_cols=182  Identities=19%  Similarity=0.307  Sum_probs=158.5

Q ss_pred             CcCCC-CCHHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEE
Q 010713            1 MKFYE-GSVGDRMAQLK--------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG   65 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~--------------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~   65 (503)
                      ||||+ |+|.+++....              ...+++.+++.++.||+.||+|||+++|+||||||+|||++.++.+||+
T Consensus        98 ~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~~~~kl~  177 (299)
T d1fgka_          98 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIA  177 (299)
T ss_dssp             ECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEEC
T ss_pred             EEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecCCCCeEec
Confidence            79998 69999997532              2468999999999999999999999999999999999999999999999


Q ss_pred             ecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc
Q 010713           66 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRR  144 (503)
Q Consensus        66 DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~  144 (503)
                      |||++........ ........+++.|+|||.+.+   +.|+.++|||||||++|||++ |.+||.+.+..+++..+.. 
T Consensus       178 dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~l~~---~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~-  252 (299)
T d1fgka_         178 DFGLARDIHHIDY-YKKTTNGRLPVKWMAPEALFD---RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE-  252 (299)
T ss_dssp             STTCCCCGGGCCT-TCCCTTSCCGGGGSCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHT-
T ss_pred             cchhhcccccccc-ccccccCCCChhhhhhhHhcC---CCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHHHHc-
Confidence            9999987654332 223345678999999999974   479999999999999999998 7999998888887766654 


Q ss_pred             cCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhc
Q 010713          145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQ  187 (503)
Q Consensus       145 ~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~  187 (503)
                      ...++.+..+++++.+||.+||+.||.+|||+.|+++.|+++.
T Consensus       253 ~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~  295 (299)
T d1fgka_         253 GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV  295 (299)
T ss_dssp             TCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHh
Confidence            5667788999999999999999999999999999999998874

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.1e-35  Score=295.89  Aligned_cols=174  Identities=20%  Similarity=0.272  Sum_probs=141.8

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEcc---CCcEEEEecCCcccccCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE---ADRAVLGDVGIPHLLLGI   76 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~---~~~vKL~DFGla~~~~~~   76 (503)
                      ||||+| +|.+++.......+++.+++.++.||+.||+|||++||+||||||+|||++.   .+.+||+|||+++.... 
T Consensus        88 mEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~-  166 (335)
T d2ozaa1          88 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS-  166 (335)
T ss_dssp             EECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCC-
T ss_pred             EECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccceeeeccC-
Confidence            899985 9999997544567999999999999999999999999999999999999985   45799999999987644 


Q ss_pred             CCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccC--CCCCC---
Q 010713           77 PLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE--IPPIP---  151 (503)
Q Consensus        77 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~--~~~~~---  151 (503)
                         ........||+.|+|||++.+.   .|+.++|||||||++|+|+||+.||.+.+..+....+.....  ...++   
T Consensus       167 ---~~~~~~~~gt~~y~aPE~~~~~---~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~  240 (335)
T d2ozaa1         167 ---HNSLTTPCYTPYYVAPEVLGPE---KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE  240 (335)
T ss_dssp             ---CCCCCCCSCCCSSCCCCCCCGG---GGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTH
T ss_pred             ---CCccccccCCcccCCcHHHcCC---CCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcc
Confidence               2234567899999999999854   688999999999999999999999987765554444433221  11222   


Q ss_pred             -CCCcHHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          152 -SGLPPAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       152 -~~~s~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                       ..+++++.+||.+||+.||++|||+.|+++
T Consensus       241 ~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         241 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             HHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             cccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence             357899999999999999999999999988

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-34  Score=285.66  Aligned_cols=181  Identities=20%  Similarity=0.310  Sum_probs=148.1

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+ |+|.+++.......+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......  
T Consensus        90 ~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~--  167 (285)
T d1fmka3          90 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE--  167 (285)
T ss_dssp             ECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred             EEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccchhhhccCCC--
Confidence            79999 589988876566789999999999999999999999999999999999999999999999999997654322  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG-VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG-~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                      ........||+.|+|||++..   +.++.++|||||||++|||++| .+|+.+....++...+.. ...++.+..+++++
T Consensus       168 ~~~~~~~~gt~~y~aPE~~~~---~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~l  243 (285)
T d1fmka3         168 YTARQGAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER-GYRMPCPPECPESL  243 (285)
T ss_dssp             --------CCGGGSCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-TCCCCCCTTSCHHH
T ss_pred             ceeeccccccccccChHHHhC---CCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHh-cCCCCCCcccCHHH
Confidence            122334678999999999974   4689999999999999999995 555666777677766654 44566888999999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQ  187 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~  187 (503)
                      .+||.+||+.||++||++.+|++.|+...
T Consensus       244 ~~li~~cl~~dP~~Rps~~~i~~~L~~~~  272 (285)
T d1fmka3         244 HDLMCQCWRKEPEERPTFEYLQAFLEDYF  272 (285)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred             HHHHHHHcccCHhHCcCHHHHHHHHhhhh
Confidence            99999999999999999999999887643

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.6e-34  Score=286.46  Aligned_cols=182  Identities=18%  Similarity=0.266  Sum_probs=154.0

Q ss_pred             CcCCC-CCHHHHHHhhc----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEc
Q 010713            1 MKFYE-GSVGDRMAQLK----------------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILN   57 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~----------------------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld   57 (503)
                      |||++ |+|.+++....                      ...+++.+++.++.||+.||+|||+++|+||||||+|||++
T Consensus        95 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld  174 (301)
T d1lufa_          95 FEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVG  174 (301)
T ss_dssp             EECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred             EEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEEC
Confidence            68887 69999996421                      23589999999999999999999999999999999999999


Q ss_pred             cCCcEEEEecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCC-CCCCCCChHH
Q 010713           58 EADRAVLGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGV-QPRCGRSVDE  136 (503)
Q Consensus        58 ~~~~vKL~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~-~Pf~~~~~~e  136 (503)
                      .++.+||+|||+++...... .........+++.|+|||.+.+.   .++.++|||||||++|||++|. +||.+.+..+
T Consensus       175 ~~~~~Kl~DFGls~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~---~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e  250 (301)
T d1lufa_         175 ENMVVKIADFGLSRNIYSAD-YYKADGNDAIPIRWMPPESIFYN---RYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE  250 (301)
T ss_dssp             GGGCEEECCCSCHHHHTGGG-CBC----CCBCGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH
T ss_pred             CCCcEEEccchhheeccCCc-cccccCCCCcCcCcCCHHHHccC---CCChhhhhccchhhHHHHHccCCCCCCCCCHHH
Confidence            99999999999997653321 12223356788999999999844   7899999999999999999985 6899988888


Q ss_pred             HHHHHHhccCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhc
Q 010713          137 IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQ  187 (503)
Q Consensus       137 ~~~~i~~~~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~  187 (503)
                      +...+... ..++++..+++++.+||.+||+.||++|||+.||++.|+++.
T Consensus       251 ~~~~v~~~-~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         251 VIYYVRDG-NILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             HHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HHHHHHcC-CCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            88777654 466778899999999999999999999999999999999875

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-34  Score=282.47  Aligned_cols=178  Identities=19%  Similarity=0.333  Sum_probs=150.8

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+ |+|.+++.......+++..+++++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++....    
T Consensus        80 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~----  155 (262)
T d1byga_          80 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS----  155 (262)
T ss_dssp             ECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred             EeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeecccccceecCC----
Confidence            79998 5999999765555699999999999999999999999999999999999999999999999999976532    


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccCCCCCCCCCcHHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAV  158 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~l  158 (503)
                        ......+++.|+|||++.+   +.++.++|||||||++|||+| |.+||...+..++...+.. ...++++..+++++
T Consensus       156 --~~~~~~~~~~y~aPE~l~~---~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~  229 (262)
T d1byga_         156 --TQDTGKLPVKWTAPEALRE---KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK-GYKMDAPDGCPPAV  229 (262)
T ss_dssp             --------CCTTTSCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTT-TCCCCCCTTCCHHH
T ss_pred             --CCccccccccCCChHHHhC---CCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc-CCCCCCCccCCHHH
Confidence              2234567899999999974   368999999999999999998 7999998888888777654 45677888999999


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          159 ENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       159 ~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      ++||.+||+.||.+|||+.++++.|+.++.
T Consensus       230 ~~li~~cl~~dP~~Rps~~~l~~~L~~i~~  259 (262)
T d1byga_         230 YEVMKNCWHLDAAMRPSFLQLREQLEHIKT  259 (262)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHcccCHhHCcCHHHHHHHHHHHHh
Confidence            999999999999999999999999998754

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-33  Score=282.34  Aligned_cols=183  Identities=23%  Similarity=0.264  Sum_probs=153.4

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      ||||+|++.+++.......+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....   ..
T Consensus        80 ~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~---~~  156 (298)
T d1gz8a_          80 FEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---PV  156 (298)
T ss_dssp             EECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCC---CS
T ss_pred             EeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceeccC---Cc
Confidence            799999888888766677899999999999999999999999999999999999999999999999999977643   22


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC-----------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-----------  149 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~-----------  149 (503)
                      .......||+.|+|||.+...  ..++.++|+|||||++|+|++|+.||.+.+..+....+......+.           
T Consensus       157 ~~~~~~~gt~~y~apE~~~~~--~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  234 (298)
T d1gz8a_         157 RTYTHEVVTLWYRAPEILLGC--KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP  234 (298)
T ss_dssp             BCTTCCBCCCTTCCHHHHTTC--SSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred             ccceeecccceeeehhhhccc--cCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhcccccccc
Confidence            334456899999999998754  2457899999999999999999999999887777666543211110           


Q ss_pred             ----------------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCC
Q 010713          150 ----------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDG  194 (503)
Q Consensus       150 ----------------~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~  194 (503)
                                      ....+++++.+||.+||+.||++|||+.|+++      |+|+++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~------H~ff~~~  289 (298)
T d1gz8a_         235 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA------HPFFQDV  289 (298)
T ss_dssp             TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT------SGGGTTC
T ss_pred             ccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhC------CHhhccC
Confidence                            01356789999999999999999999999998      8888653

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-34  Score=290.43  Aligned_cols=201  Identities=18%  Similarity=0.307  Sum_probs=166.6

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||+. |+|.+++.  ..+.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......  
T Consensus       108 ~e~~~~~~L~~~i~--~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~--  183 (322)
T d1vzoa_         108 LDYINGGELFTHLS--QRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE--  183 (322)
T ss_dssp             ECCCCSCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGG--
T ss_pred             eecccccHHHHHHH--hcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeeccchhhhcccc--
Confidence            78998 59999987  45678899999999999999999999999999999999999999999999999997653321  


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--cCCCCCCCCCcHH
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR--QEIPPIPSGLPPA  157 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~--~~~~~~~~~~s~~  157 (503)
                      ........|++.|+|||.+.+. ...++.++|||||||+||+|++|..||.+.+..+....+...  ...++++..++++
T Consensus       184 ~~~~~~~~g~~~~~~pe~~~~~-~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~  262 (322)
T d1vzoa_         184 TERAYDFCGTIEYMAPDIVRGG-DSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSAL  262 (322)
T ss_dssp             GGGGCGGGSCCTTCCHHHHTTC-C---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSCHH
T ss_pred             cccccccccccccchhHHhhcC-CcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCCCcccCCHH
Confidence            2223456899999999999754 235788999999999999999999999876544433333321  2456677889999


Q ss_pred             HHHHHHHhhhcCCCCCC-----CHHHHHHHHHhhccCcCCCCCCCCCCCcCCCCCCCCCC
Q 010713          158 VENVLLGCFEYDLRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGY  212 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RP-----S~~elL~~L~~i~~~~~~~~~w~~~~~~~~~~p~~~~~  212 (503)
                      +.+||.+||++||++||     |++|+++      |+|++..+|..+..+.+++|..|..
T Consensus       263 ~~~li~~~l~~dP~~R~s~~~~t~~eil~------Hpff~~i~~~~l~~~~~~~p~~p~~  316 (322)
T d1vzoa_         263 AKDLIQRLLMKDPKKRLGCGPRDADEIKE------HLFFQKINWDDLAAKKVPAPFKPVI  316 (322)
T ss_dssp             HHHHHHHHTCSSGGGSTTSSTTTHHHHHT------SGGGTTCCHHHHHTTCSCCSCCCCC
T ss_pred             HHHHHHHHcccCHHHcCCCCcccHHHHHc------CHhhcCCCHHHHHhCCCCcCCCCCC
Confidence            99999999999999999     4788877      9999999999999999999998854

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-33  Score=281.67  Aligned_cols=187  Identities=16%  Similarity=0.277  Sum_probs=153.2

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      ||||+ |+|.+++.. ....+++..++.++.|++.||.|||+.+|+||||||+|||+++++.+||+|||+++........
T Consensus       108 ~E~~~~g~l~~~~~~-~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~  186 (311)
T d1r0pa_         108 LPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD  186 (311)
T ss_dssp             EECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCC
T ss_pred             EEEeecCchhhhhcc-ccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhccccccc
Confidence            79999 588888764 5567889999999999999999999999999999999999999999999999999876443222


Q ss_pred             -CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHhccCCCCCCCCCcHH
Q 010713           80 -SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR-SVDEIYDAVVRRQEIPPIPSGLPPA  157 (503)
Q Consensus        80 -~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~-~~~e~~~~i~~~~~~~~~~~~~s~~  157 (503)
                       ........||+.|+|||.+..   +.++.++||||||+++|||+||..||... +..+....+.. ...+..|..++++
T Consensus       187 ~~~~~~~~~gt~~y~aPE~~~~---~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~-g~~~~~p~~~~~~  262 (311)
T d1r0pa_         187 SVHNKTGAKLPVKWMALESLQT---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRRLLQPEYCPDP  262 (311)
T ss_dssp             CTTCTTCSSCCGGGSCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHT-TCCCCCCTTCCHH
T ss_pred             cceecccccccccccChHHHhc---CCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHc-CCCCCCcccCcHH
Confidence             122334578999999999874   47899999999999999999977776543 34444444444 4566778889999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          158 VENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      +.+||.+||+.||++||++.|+++.|+++.+.+..
T Consensus       263 l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~~~~  297 (311)
T d1r0pa_         263 LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG  297 (311)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCS
T ss_pred             HHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhhhh
Confidence            99999999999999999999999999999876554

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-33  Score=281.60  Aligned_cols=183  Identities=18%  Similarity=0.301  Sum_probs=157.2

Q ss_pred             CcCCCC-CHHHHHHhhc----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEE
Q 010713            1 MKFYEG-SVGDRMAQLK----------------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAV   63 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~----------------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vK   63 (503)
                      ||||+| +|.+++....                ...+++.+++.++.||+.||+|||+++|+||||||+||+++.++.++
T Consensus       106 mE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~~~~k  185 (311)
T d1t46a_         106 TEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITK  185 (311)
T ss_dssp             EECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEE
T ss_pred             EEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccccccCccc
Confidence            799984 9999987532                23689999999999999999999999999999999999999999999


Q ss_pred             EEecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 010713           64 LGDVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVV  142 (503)
Q Consensus        64 L~DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~e~~~~i~  142 (503)
                      ++|||+++...... .........||+.|+|||.+.+   +.++.++|||||||++|||+| |.+||...+..+.+..+.
T Consensus       186 i~DfG~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i  261 (311)
T d1t46a_         186 ICDFGLARDIKNDS-NYVVKGNARLPVKWMAPESIFN---CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI  261 (311)
T ss_dssp             ECCCGGGSCTTSCT-TSEECSSSEECGGGCCHHHHHH---CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHH
T ss_pred             ccccchheeccCCC-cceEeeecccChHHcCHHHhcC---CCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            99999998764322 1222345678999999999974   468999999999999999998 677787777777777777


Q ss_pred             hccCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhc
Q 010713          143 RRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQ  187 (503)
Q Consensus       143 ~~~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~  187 (503)
                      .....+..+..+++.+.+||.+||+.||.+|||+.++++.|+++.
T Consensus       262 ~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i  306 (311)
T d1t46a_         262 KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI  306 (311)
T ss_dssp             HHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhh
Confidence            777778888899999999999999999999999999999998754

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-33  Score=286.30  Aligned_cols=173  Identities=18%  Similarity=0.308  Sum_probs=149.2

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC--CcEEEEecCCcccccCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA--DRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~--~~vKL~DFGla~~~~~~~   77 (503)
                      ||||+| +|.+++.. ....+++.++..++.||+.||+|||++||+||||||+|||++.+  ..+||+|||++.....  
T Consensus        80 mE~~~gg~L~~~i~~-~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~--  156 (321)
T d1tkia_          80 FEFISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP--  156 (321)
T ss_dssp             ECCCCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT--
T ss_pred             EecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhcccc--
Confidence            899995 99999963 34579999999999999999999999999999999999999854  4899999999977543  


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC--CCCCCc
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--IPSGLP  155 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~--~~~~~s  155 (503)
                        ........+|+.|+|||.+.+.   .++.++|||||||++|+|++|..||.+.+..+.+..+.......+  ....++
T Consensus       157 --~~~~~~~~~t~~y~ape~~~~~---~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s  231 (321)
T d1tkia_         157 --GDNFRLLFTAPEYYAPEVHQHD---VVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEIS  231 (321)
T ss_dssp             --TCEEEEEESCGGGSCHHHHTTC---EECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSC
T ss_pred             --CCcccccccccccccchhccCC---CCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCC
Confidence              2223456789999999999754   688999999999999999999999999999998888877544332  225789


Q ss_pred             HHHHHHHHHhhhcCCCCCCCHHHHHH
Q 010713          156 PAVENVLLGCFEYDLRSRPLMTDILR  181 (503)
Q Consensus       156 ~~l~~LI~~cL~~DP~~RPS~~elL~  181 (503)
                      +++++||.+||..||.+|||+.|+++
T Consensus       232 ~~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         232 IEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhc
Confidence            99999999999999999999999998

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-33  Score=277.86  Aligned_cols=170  Identities=17%  Similarity=0.213  Sum_probs=142.4

Q ss_pred             CcCCCC--CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccC-CcEEEEecCCcccccCCC
Q 010713            1 MKFYEG--SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEA-DRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~G--SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~-~~vKL~DFGla~~~~~~~   77 (503)
                      |||+.|  ++.+++.  ....+++.+++.++.||+.||+|||++||+||||||+|||++.+ +.+||+|||++.....  
T Consensus        88 ~e~~~~~~~l~~~~~--~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~--  163 (273)
T d1xwsa_          88 LERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--  163 (273)
T ss_dssp             EECCSSEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCS--
T ss_pred             EEeccCcchHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccceeccc--
Confidence            788874  7788876  45679999999999999999999999999999999999999855 7999999999976532  


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCCCCCCcHH
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPA  157 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~~~~~s~~  157 (503)
                         .......||+.|+|||++.+..  .++.++|||||||++|+|++|+.||.+.+      .+..  ....++..+|++
T Consensus       164 ---~~~~~~~GT~~y~aPE~~~~~~--~~~~~~DiwSlGvilyell~g~~Pf~~~~------~i~~--~~~~~~~~~s~~  230 (273)
T d1xwsa_         164 ---TVYTDFDGTRVYSPPEWIRYHR--YHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIR--GQVFFRQRVSSE  230 (273)
T ss_dssp             ---SCBCCCCSCGGGSCHHHHHHSC--BCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHH--CCCCCSSCCCHH
T ss_pred             ---ccccccccCCCcCCHHHHcCCC--CCCcccccccceeeehhHhhCCCCCCCch------HHhh--cccCCCCCCCHH
Confidence               2334568999999999987431  24678999999999999999999997532      2222  234567889999


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          158 VENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       158 l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                      +++||.+||+.||++|||+.|+++      |+|+.+
T Consensus       231 ~~~li~~~L~~dp~~R~s~~eil~------hp~~~~  260 (273)
T d1xwsa_         231 CQHLIRWCLALRPSDRPTFEEIQN------HPWMQD  260 (273)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHT------SGGGSS
T ss_pred             HHHHHHHHccCCHhHCcCHHHHhc------CHhhCC
Confidence            999999999999999999999988      888764

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=5.6e-33  Score=278.91  Aligned_cols=181  Identities=19%  Similarity=0.284  Sum_probs=154.9

Q ss_pred             CcCCC-CCHHHHHHhh--------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEE
Q 010713            1 MKFYE-GSVGDRMAQL--------------KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLG   65 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~--------------~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~   65 (503)
                      ||||+ |+|.+++...              ....+++.++.+++.||+.||.|||+++|+||||||+|||++.++.+||+
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~  169 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA  169 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEEC
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCCceEEc
Confidence            79999 6999999642              24679999999999999999999999999999999999999999999999


Q ss_pred             ecCCcccccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHhc
Q 010713           66 DVGIPHLLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG-VQPRCGRSVDEIYDAVVRR  144 (503)
Q Consensus        66 DFGla~~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG-~~Pf~~~~~~e~~~~i~~~  144 (503)
                      |||+++....    ........||..|+|||.+.+   +.++.++|||||||++|||++| .+||.+.+..+++..+.. 
T Consensus       170 DfG~a~~~~~----~~~~~~~~gt~~y~aPE~l~~---~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~-  241 (309)
T d1fvra_         170 DFGLSRGQEV----YVKKTMGRLPVRWMAIESLNY---SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-  241 (309)
T ss_dssp             CTTCEESSCE----ECCC----CCTTTCCHHHHHH---CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGG-
T ss_pred             cccccccccc----cccccceecCCcccchHHhcc---CCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHh-
Confidence            9999976533    222234568999999999974   3689999999999999999996 467988888888877655 


Q ss_pred             cCCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccC
Q 010713          145 QEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNS  189 (503)
Q Consensus       145 ~~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~  189 (503)
                      ...++.+..+++++.+||.+||+.||++|||+.|+++.|+++.+.
T Consensus       242 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~  286 (309)
T d1fvra_         242 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  286 (309)
T ss_dssp             TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             cCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            456777889999999999999999999999999999999988653

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.98  E-value=7.4e-33  Score=274.10  Aligned_cols=180  Identities=19%  Similarity=0.268  Sum_probs=146.4

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      |||+.|++.+.+.. ..+.+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||++......   .
T Consensus        79 ~e~~~~~~~~~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~---~  154 (286)
T d1ob3a_          79 FEHLDQDLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP---V  154 (286)
T ss_dssp             EECCSEEHHHHHHT-STTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred             EEeehhhhHHHHHh-hcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecccC---c
Confidence            68888877777654 5678999999999999999999999999999999999999999999999999999776431   2


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------  148 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~------------  148 (503)
                      .......+++.|+|||.+.+.  ..++.++|+|||||++|||++|+.||.+.+..+...++......+            
T Consensus       155 ~~~~~~~~~~~y~~pE~~~~~--~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  232 (286)
T d1ob3a_         155 RKYTHEIVTLWYRAPDVLMGS--KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP  232 (286)
T ss_dssp             -------CCCTTCCHHHHTTC--CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred             cccceecccchhhhHHHHhCC--CCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhh
Confidence            233455789999999999753  357899999999999999999999999988877766654321111            


Q ss_pred             ---------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          149 ---------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       149 ---------------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                                     .....+++.+.+||.+||+.||++|||+.|+++      |+|+.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~------Hp~f~  285 (286)
T d1ob3a_         233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE------HAYFK  285 (286)
T ss_dssp             TCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT------SGGGG
T ss_pred             hcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc------CcccC
Confidence                           123567899999999999999999999999987      77764

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.3e-32  Score=280.63  Aligned_cols=181  Identities=20%  Similarity=0.244  Sum_probs=149.3

Q ss_pred             CcCCCCCHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC-cEEEEecCCcccccCCC
Q 010713            1 MKFYEGSVGDRMAQL--KGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD-RAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~GSL~d~L~~~--~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~-~vKL~DFGla~~~~~~~   77 (503)
                      ||||+|++.+.+...  ....+++.+++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||++.....  
T Consensus        98 ~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~--  175 (350)
T d1q5ka_          98 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--  175 (350)
T ss_dssp             EECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCT--
T ss_pred             EeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccchhhccC--
Confidence            799998777666532  466899999999999999999999999999999999999999775 899999999987643  


Q ss_pred             CCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC---------
Q 010713           78 LPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP---------  148 (503)
Q Consensus        78 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~---------  148 (503)
                        ........||+.|+|||.+.+.  ..++.++|||||||++|||++|..||...+..+.+..+......+         
T Consensus       176 --~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~  251 (350)
T d1q5ka_         176 --GEPNVSYICSRYYRAPELIFGA--TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN  251 (350)
T ss_dssp             --TSCCCSCCSCTTSCCHHHHTTC--SSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHC
T ss_pred             --CcccccccccccccChHHhhcc--cCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhc
Confidence              2233456899999999988753  258899999999999999999999999888777766654321110         


Q ss_pred             ------------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          149 ------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       149 ------------------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                                        .....+++++.+||.+||..||++|||+.|+++      |+|+..
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~------Hp~f~~  308 (350)
T d1q5ka_         252 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA------HSFFDE  308 (350)
T ss_dssp             C---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT------SGGGGG
T ss_pred             cchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhc------CHhhcc
Confidence                              112457899999999999999999999999988      777654

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.98  E-value=1e-32  Score=274.74  Aligned_cols=183  Identities=18%  Similarity=0.200  Sum_probs=145.6

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEcc---CCcEEEEecCCcccccCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE---ADRAVLGDVGIPHLLLGIP   77 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~---~~~vKL~DFGla~~~~~~~   77 (503)
                      |||++|+|.+.+.. ....+++.++..++.|++.||+|||++||+||||||+|||++.   +..++|+|||+|+......
T Consensus        82 me~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~  160 (299)
T d1ckia_          82 MELLGPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR  160 (299)
T ss_dssp             EECCCCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTT
T ss_pred             EEEcCCchhhhhhh-ccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccccc
Confidence            79999999888764 5678999999999999999999999999999999999999864   4579999999998765432


Q ss_pred             CC----CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHH---hc---cCC
Q 010713           78 LP----SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV---RR---QEI  147 (503)
Q Consensus        78 ~~----~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~---~~---~~~  147 (503)
                      ..    ........||+.|+|||++.+.   .++.++|||||||++|||++|..||...........+.   ..   ...
T Consensus       161 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~  237 (299)
T d1ckia_         161 THQHIPYRENKNLTGTARYASINTHLGI---EQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI  237 (299)
T ss_dssp             TCCBCCCCBCCSCCCCSSSCCHHHHTTB---CCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCH
T ss_pred             cccceeccccCCcCCCccccCHHHHhCC---CCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCCh
Confidence            11    1223456899999999999854   68999999999999999999999998765544332221   11   111


Q ss_pred             CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhc
Q 010713          148 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQ  187 (503)
Q Consensus       148 ~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~  187 (503)
                      +.....+|+++.+||..||+.||++||++.++.+.|+.+.
T Consensus       238 ~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~  277 (299)
T d1ckia_         238 EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF  277 (299)
T ss_dssp             HHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHH
T ss_pred             hHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence            2234678999999999999999999999999988887653

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.9e-32  Score=278.87  Aligned_cols=181  Identities=17%  Similarity=0.221  Sum_probs=147.7

Q ss_pred             cCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCCC
Q 010713            2 KFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPSS   81 (503)
Q Consensus         2 Ey~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~~   81 (503)
                      ++++|+|.+++..   ..+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++...........
T Consensus        91 ~~~~g~L~~~l~~---~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~  167 (345)
T d1pmea_          91 HLMGADLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG  167 (345)
T ss_dssp             ECCCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCC
T ss_pred             eecCCchhhhhhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceeeccCCCccce
Confidence            4445799999953   4699999999999999999999999999999999999999999999999999977644333333


Q ss_pred             CCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC-------------
Q 010713           82 DLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP-------------  148 (503)
Q Consensus        82 ~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~-------------  148 (503)
                      .....+||+.|+|||++...  ..++.++||||+||++|+|++|+.||.+.+..+...........+             
T Consensus       168 ~~~~~~gt~~y~aPE~l~~~--~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (345)
T d1pmea_         168 FLTEYVATRWYRAPEIMLNS--KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA  245 (345)
T ss_dssp             TTCCCCSCGGGCCGGGTTTB--CSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHH
T ss_pred             eeccccccceechHHHhhcC--CCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhh
Confidence            44567899999999998643  357889999999999999999999999887666555443211111             


Q ss_pred             ----------------CCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          149 ----------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       149 ----------------~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                                      .....+++++.+||.+||+.||.+|||+.|+++      |+|+..
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~------hpf~~~  300 (345)
T d1pmea_         246 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA------HPYLEQ  300 (345)
T ss_dssp             HHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT------SGGGTT
T ss_pred             hcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhc------CHhhcc
Confidence                            012467889999999999999999999999998      777653

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.7e-32  Score=276.32  Aligned_cols=178  Identities=21%  Similarity=0.265  Sum_probs=149.6

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      ||||+++|.+++.   ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+|++|||++.....     
T Consensus       102 ~e~~~~~l~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~-----  173 (346)
T d1cm8a_         102 MPFMGTDLGKLMK---HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS-----  173 (346)
T ss_dssp             EECCSEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCS-----
T ss_pred             EecccccHHHHHH---hccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccccceeccCC-----
Confidence            7899778888774   46799999999999999999999999999999999999999999999999999987532     


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCC-------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-------------  147 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~-------------  147 (503)
                       ......||+.|+|||++.+.  ..++.++|||||||++|+|++|..||.+.+.......+......             
T Consensus       174 -~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (346)
T d1cm8a_         174 -EMTGYVVTRWYRAPEVILNW--MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDE  250 (346)
T ss_dssp             -SCCSSCSCGGGCCTHHHHTT--TCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHH
T ss_pred             -ccccccccccccCHHHHcCC--CCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchh
Confidence             34567899999999998643  25689999999999999999999999988776655444332111             


Q ss_pred             ----------------CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCC
Q 010713          148 ----------------PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGG  195 (503)
Q Consensus       148 ----------------~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~  195 (503)
                                      ......+++.+.+||.+||..||.+|||+.|+++      |+|+....
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~------Hp~f~~~~  308 (346)
T d1cm8a_         251 AKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA------HPYFESLH  308 (346)
T ss_dssp             HHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH------SGGGTTTC
T ss_pred             hhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhc------ChhhCcCC
Confidence                            1123567899999999999999999999999998      88887644

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.3e-32  Score=276.26  Aligned_cols=187  Identities=20%  Similarity=0.330  Sum_probs=159.0

Q ss_pred             CcCCC-CCHHHHHHhhc--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcc
Q 010713            1 MKFYE-GSVGDRMAQLK--------GGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPH   71 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~--------~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~   71 (503)
                      ||||+ |+|.+++....        ...++...+.+++.|++.||.|||+++|+||||||+|||++.++++||+|||+++
T Consensus       102 ~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl~DFGla~  181 (308)
T d1p4oa_         102 MELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR  181 (308)
T ss_dssp             EECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCC
T ss_pred             EeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCceEEEeecccce
Confidence            78998 69999987532        1357899999999999999999999999999999999999999999999999997


Q ss_pred             cccCCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHhccCCCCC
Q 010713           72 LLLGIPLPSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTG-VQPRCGRSVDEIYDAVVRRQEIPPI  150 (503)
Q Consensus        72 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG-~~Pf~~~~~~e~~~~i~~~~~~~~~  150 (503)
                      ....... ........+|+.|+|||.+.+.   .++.++|||||||++|||+|| .+||.+.+..+.+..+... ..++.
T Consensus       182 ~~~~~~~-~~~~~~~~~t~~y~aPe~l~~~---~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~-~~~~~  256 (308)
T d1p4oa_         182 DIYETDY-YRKGGKGLLPVRWMSPESLKDG---VFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG-GLLDK  256 (308)
T ss_dssp             GGGGGGC-EEGGGSSEECGGGCCHHHHHHC---CCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTT-CCCCC
T ss_pred             eccCCcc-eeeccceecccccCCHHHHccC---CCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC-CCCCC
Confidence            6543221 1122345689999999999744   688999999999999999998 5889999988888877654 45667


Q ss_pred             CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          151 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       151 ~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                      +..+++.+.+||.+||+.||++|||+.++++.|++..++.+.
T Consensus       257 p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~~~  298 (308)
T d1p4oa_         257 PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFR  298 (308)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHH
T ss_pred             cccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCc
Confidence            889999999999999999999999999999999988776653

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.97  E-value=5.2e-32  Score=269.81  Aligned_cols=184  Identities=17%  Similarity=0.245  Sum_probs=149.4

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEcc-----CCcEEEEecCCcccccC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNE-----ADRAVLGDVGIPHLLLG   75 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~-----~~~vKL~DFGla~~~~~   75 (503)
                      ||||+|+|.+++.. ....++..++..++.|++.||+|||++||+||||||+|||++.     ++.+||+|||+++....
T Consensus        80 me~~~~~l~~~~~~-~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~  158 (293)
T d1csna_          80 IDLLGPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD  158 (293)
T ss_dssp             EECCCCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred             EEecCCCHHHHHHh-hccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEccc
Confidence            79999999999864 5567999999999999999999999999999999999999974     56899999999987643


Q ss_pred             CCC----CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHhccCC-
Q 010713           76 IPL----PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS---VDEIYDAVVRRQEI-  147 (503)
Q Consensus        76 ~~~----~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~---~~e~~~~i~~~~~~-  147 (503)
                      ...    .........||+.|||||++.+.   .++.++|||||||++|||++|..||.+..   ..+.+..+...... 
T Consensus       159 ~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~---~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~  235 (293)
T d1csna_         159 PVTKQHIPYREKKNLSGTARYMSINTHLGR---EQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST  235 (293)
T ss_dssp             TTTCCBCCCCCCCCCCSCTTTCCHHHHTTC---CCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS
T ss_pred             CccccceeecccCceEEchhhcCHHHhcCC---CCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCC
Confidence            221    12233456899999999999854   68999999999999999999999997643   33333333322211 


Q ss_pred             --CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          148 --PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       148 --~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                        ......+|+++.+++..|+..+|++||++..+.+.|+++..
T Consensus       236 ~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~  278 (293)
T d1csna_         236 PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE  278 (293)
T ss_dssp             CHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred             ChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHH
Confidence              12346789999999999999999999999999888877654

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.7e-31  Score=267.96  Aligned_cols=184  Identities=19%  Similarity=0.179  Sum_probs=148.2

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCC-C
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPL-P   79 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~-~   79 (503)
                      ||||++.+...+.. ....+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||++........ .
T Consensus        96 ~e~~~~~~~~~~~~-~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~  174 (318)
T d3blha1          96 FDFCEHDLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ  174 (318)
T ss_dssp             EECCCEEHHHHHTC-TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCC-----
T ss_pred             EeccCCCccchhhh-cccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecceeeecccccccc
Confidence            68999877766643 567899999999999999999999999999999999999999999999999999976543221 1


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCCC--C------
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPI--P------  151 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~~--~------  151 (503)
                      .......+||+.|+|||++.+.  ..++.++|||||||++|+|++|+.||.+.+..+....+......+..  .      
T Consensus       175 ~~~~~~~~gT~~Y~aPE~~~~~--~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  252 (318)
T d3blha1         175 PNRYTNRVVTLWYRPPELLLGE--RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNY  252 (318)
T ss_dssp             CCCCCSCCSCGGGCCHHHHTTC--SSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC
T ss_pred             cccccceecCHHHhhHHHHcCC--CCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchh
Confidence            2223456799999999998753  25889999999999999999999999988877766665443222110  0      


Q ss_pred             ----------------------CCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          152 ----------------------SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       152 ----------------------~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                                            ...++.+.+||.+||+.||++|||+.|+++      |+||..
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~------Hpff~~  310 (318)
T d3blha1         253 ELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN------HDFFWS  310 (318)
T ss_dssp             -------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHH------SGGGSS
T ss_pred             hhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHc------Chhhcc
Confidence                                  013677889999999999999999999998      999864

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.1e-32  Score=270.84  Aligned_cols=185  Identities=19%  Similarity=0.261  Sum_probs=143.4

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH--------CCCeecccCCCcEEEccCCcEEEEecCCcc
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS--------KGILVLNLKPFNFILNEADRAVLGDVGIPH   71 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs--------~gIvHrDLKP~NILld~~~~vKL~DFGla~   71 (503)
                      ||||+ |+|.+++..   ..+++.+++.++.|++.||+|||+        +||+||||||+|||++.++.+||+|||+++
T Consensus        80 ~Ey~~~g~L~~~l~~---~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~  156 (303)
T d1vjya_          80 SDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  156 (303)
T ss_dssp             EECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             EecccCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccc
Confidence            79998 599999964   469999999999999999999996        599999999999999999999999999998


Q ss_pred             cccCCCCC-CCCCCCccCCCCCCCccccCCCCC---CCCCCccchHHHHHHHHHHHhCCCCCCC---------------C
Q 010713           72 LLLGIPLP-SSDLPRRLGTPNYMAPEQWQPEVR---GPISFETDSWGFACSIIEMLTGVQPRCG---------------R  132 (503)
Q Consensus        72 ~~~~~~~~-~~~~~~~~Gt~~Y~APE~l~~~~~---~~~s~ksDIwSLGviLyeLltG~~Pf~~---------------~  132 (503)
                      ........ ........||+.|+|||++.+...   ..++.++|||||||+||||+||..||..               .
T Consensus       157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~  236 (303)
T d1vjya_         157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP  236 (303)
T ss_dssp             EEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred             cccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccc
Confidence            76443211 123345689999999999875321   1256789999999999999999877632               1


Q ss_pred             ChHHHHHHHHhccCCCCCCCC-----CcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhcc
Q 010713          133 SVDEIYDAVVRRQEIPPIPSG-----LPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN  188 (503)
Q Consensus       133 ~~~e~~~~i~~~~~~~~~~~~-----~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~  188 (503)
                      ...............+.++..     ....+.+|+.+||+.||++|||+.|+++.|+++..
T Consensus       237 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~  297 (303)
T d1vjya_         237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  297 (303)
T ss_dssp             CHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence            223344444444444444432     23568999999999999999999999999988753

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.97  E-value=4e-31  Score=266.54  Aligned_cols=180  Identities=14%  Similarity=0.206  Sum_probs=142.7

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCC-cEEEEecCCcccccCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEAD-RAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~-~vKL~DFGla~~~~~~~~   78 (503)
                      ||||++ +|.++     .+.+++.+++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||++.....   
T Consensus       111 ~e~~~~~~L~~~-----~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~---  182 (328)
T d3bqca1         111 FEHVNNTDFKQL-----YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP---  182 (328)
T ss_dssp             EECCCSCBGGGT-----TTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCT---
T ss_pred             EeecCCCcHHHH-----hcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceeccC---
Confidence            799995 66543     34699999999999999999999999999999999999998765 689999999987643   


Q ss_pred             CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHhc-------------
Q 010713           79 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV-DEIYDAVVRR-------------  144 (503)
Q Consensus        79 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-~e~~~~i~~~-------------  144 (503)
                       ........+|+.|+|||.+.+.  ..++.++|+|||||++|+|++|..||..... .+....+...             
T Consensus       183 -~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~  259 (328)
T d3bqca1         183 -GQEYNVRVASRYFKGPELLVDY--QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY  259 (328)
T ss_dssp             -TCCCCSCCSCGGGCCHHHHTTC--CCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred             -CCcccccccCccccCcccccCC--CCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhc
Confidence             2234566899999999998754  2578999999999999999999999976432 2222221110             


Q ss_pred             c----------------------CCCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCCCCCC
Q 010713          145 Q----------------------EIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSDGGWT  197 (503)
Q Consensus       145 ~----------------------~~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~~~w~  197 (503)
                      .                      ........+++++.+||.+||+.||.+|||++|+++      |+||....|+
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~------Hp~F~~v~~~  328 (328)
T d3bqca1         260 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME------HPYFYTVVKD  328 (328)
T ss_dssp             TCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT------SGGGTTSCCC
T ss_pred             ccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc------CcccCCCCCC
Confidence            0                      000112347899999999999999999999999998      9999988774

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.9e-31  Score=268.26  Aligned_cols=176  Identities=20%  Similarity=0.250  Sum_probs=143.7

Q ss_pred             CcCCC-CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYE-GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~-GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||+. |+|.+++.   .+++++.++..++.||+.||+|||++||+||||||+|||++.++.+|++|||++....     
T Consensus       101 ~~~~~gg~L~~~~~---~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~-----  172 (348)
T d2gfsa1         101 VTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----  172 (348)
T ss_dssp             EEECCSEEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCT-----
T ss_pred             EEeecCCchhhhcc---cccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccchhcccC-----
Confidence            34454 69999884   4679999999999999999999999999999999999999999999999999986642     


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCCC----------
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP----------  149 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~~----------  149 (503)
                       .......|++.|+|||.+.+.  ..++.++|||||||++|+|++|+.||.+.+.......+......+.          
T Consensus       173 -~~~~~~~g~~~y~apE~~~~~--~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  249 (348)
T d2gfsa1         173 -DEMTGYVATRWYRAPEIMLNW--MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE  249 (348)
T ss_dssp             -GGGSSSCHHHHTSCHHHHTTC--SCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCH
T ss_pred             -cccccccccccccCchhhcCC--ccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccch
Confidence             233456789999999987753  2468899999999999999999999999887777666654322211          


Q ss_pred             -------------------CCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          150 -------------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       150 -------------------~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                                         ....+++++.+||.+||+.||.+|||+.|+++      |+|+..
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~------Hp~f~~  306 (348)
T d2gfsa1         250 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA------HAYFAQ  306 (348)
T ss_dssp             HHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT------SGGGTT
T ss_pred             hhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhc------CHhhCC
Confidence                               11357899999999999999999999999998      888864

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.8e-30  Score=254.91  Aligned_cols=180  Identities=19%  Similarity=0.240  Sum_probs=144.0

Q ss_pred             CcCCCC-CHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCC
Q 010713            1 MKFYEG-SVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLP   79 (503)
Q Consensus         1 MEy~~G-SL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~   79 (503)
                      |||+.| +|..++.  ..+.+++.++..++.|++.||+|||++||+||||||+|||++.++.+||+|||.+......   
T Consensus        80 ~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~---  154 (292)
T d1unla_          80 FEFCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP---  154 (292)
T ss_dssp             EECCSEEHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSC---
T ss_pred             eeeccccccccccc--cccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccCC---
Confidence            577886 4554443  5678999999999999999999999999999999999999999999999999999876432   


Q ss_pred             CCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCC-CCCChHHHHHHHHhccCC-----------
Q 010713           80 SSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPR-CGRSVDEIYDAVVRRQEI-----------  147 (503)
Q Consensus        80 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf-~~~~~~e~~~~i~~~~~~-----------  147 (503)
                      ........+++.|+|||.+...  ..++.++|||||||++|+|++|..|| .+.+..+....+......           
T Consensus       155 ~~~~~~~~~~~~~~~pe~~~~~--~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (292)
T d1unla_         155 VRCYSAEVVTLWYRPPDVLFGA--KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTK  232 (292)
T ss_dssp             CSCCCSCCSCGGGCCHHHHTTC--SCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGG
T ss_pred             CccceeeccccchhhhhHhccC--CCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhh
Confidence            2233345678899999998754  24689999999999999999999885 455556555554432111           


Q ss_pred             ----------------CCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          148 ----------------PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       148 ----------------~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                                      ......+++.+.+||.+||+.||.+|||+.|+++      |+|+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~------Hp~f~~  288 (292)
T d1unla_         233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ------HPYFSD  288 (292)
T ss_dssp             STTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT------SGGGSS
T ss_pred             cccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc------ChhhcC
Confidence                            1123467899999999999999999999999988      888864

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.2e-30  Score=266.46  Aligned_cols=176  Identities=20%  Similarity=0.224  Sum_probs=138.3

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccccCCCCCC
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLLLGIPLPS   80 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~~~~~~~~   80 (503)
                      ||||.|++.+.+.    ..+++.+++.++.||+.||+|||++||+||||||+|||++.++.++++|||+++....    .
T Consensus       101 ~Ey~~~~l~~~~~----~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~----~  172 (355)
T d2b1pa1         101 MELMDANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----S  172 (355)
T ss_dssp             EECCSEEHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------
T ss_pred             EeccchHHHHhhh----cCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhhhhcccc----c
Confidence            7999998887773    4689999999999999999999999999999999999999999999999998876543    2


Q ss_pred             CCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccCCC------------
Q 010713           81 SDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------  148 (503)
Q Consensus        81 ~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~e~~~~i~~~~~~~------------  148 (503)
                      .......+|+.|+|||++.+.   .++.++||||+||++|+|++|+.||.+.+.......+......+            
T Consensus       173 ~~~~~~~~t~~y~aPE~l~~~---~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  249 (355)
T d2b1pa1         173 FMMTPYVVTRYYRAPEVILGM---GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV  249 (355)
T ss_dssp             --------CCTTCCHHHHTTC---CCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHH
T ss_pred             cccccccccccccChhhhcCC---CCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhH
Confidence            233456789999999999854   68899999999999999999999999887776665554321110            


Q ss_pred             --------CC--------------------CCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCCC
Q 010713          149 --------PI--------------------PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHSD  193 (503)
Q Consensus       149 --------~~--------------------~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~~  193 (503)
                              ..                    ....++++.+||.+||..||++|||++|+|+      |+|+..
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~------Hpw~~~  316 (355)
T d2b1pa1         250 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ------HPYINV  316 (355)
T ss_dssp             HHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT------STTTGG
T ss_pred             HHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc------CcccCC
Confidence                    00                    0113567899999999999999999999998      999875

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=2e-27  Score=241.29  Aligned_cols=175  Identities=18%  Similarity=0.226  Sum_probs=132.6

Q ss_pred             CCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecccCCCcEEEccCC------cEEEEecCCcccccCCCC
Q 010713            6 GSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHS-KGILVLNLKPFNFILNEAD------RAVLGDVGIPHLLLGIPL   78 (503)
Q Consensus         6 GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs-~gIvHrDLKP~NILld~~~------~vKL~DFGla~~~~~~~~   78 (503)
                      ++............+++..+..++.||+.||+|||+ +||+||||||+|||++.++      .++++|||.+.....   
T Consensus       108 ~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~---  184 (362)
T d1q8ya_         108 ENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE---  184 (362)
T ss_dssp             EEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTB---
T ss_pred             cccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeeccccccccc---
Confidence            345555555567889999999999999999999998 8999999999999998665      389999999876532   


Q ss_pred             CCCCCCCccCCCCCCCccccCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCChH------HHHHHHHhccC------
Q 010713           79 PSSDLPRRLGTPNYMAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD------EIYDAVVRRQE------  146 (503)
Q Consensus        79 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~------e~~~~i~~~~~------  146 (503)
                         ......||+.|+|||++.+.   .++.++|+||+||++++|++|+.||......      +..........      
T Consensus       185 ---~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~  258 (362)
T d1q8ya_         185 ---HYTNSIQTREYRSPEVLLGA---PWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYL  258 (362)
T ss_dssp             ---CCCSCCSCGGGCCHHHHHTC---CCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHH
T ss_pred             ---ccccccccccccChhhcccc---CCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHH
Confidence               33466899999999999844   6889999999999999999999999754321      11111110000      


Q ss_pred             ----------------------------------CCCCCCCCcHHHHHHHHHhhhcCCCCCCCHHHHHHHHHhhccCcCC
Q 010713          147 ----------------------------------IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSVHS  192 (503)
Q Consensus       147 ----------------------------------~~~~~~~~s~~l~~LI~~cL~~DP~~RPS~~elL~~L~~i~~~~~~  192 (503)
                                                        ........++++.+||.+||++||.+|||++|+|+      |+|+.
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~------Hp~f~  332 (362)
T d1q8ya_         259 LRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN------HPWLK  332 (362)
T ss_dssp             HHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT------CGGGT
T ss_pred             hhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhc------CcccC
Confidence                                              00112234678999999999999999999999987      99987


Q ss_pred             CCC
Q 010713          193 DGG  195 (503)
Q Consensus       193 ~~~  195 (503)
                      +..
T Consensus       333 ~~~  335 (362)
T d1q8ya_         333 DTL  335 (362)
T ss_dssp             TCT
T ss_pred             CCC
Confidence            543

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.15  E-value=5.7e-12  Score=115.61  Aligned_cols=64  Identities=13%  Similarity=0.137  Sum_probs=52.6

Q ss_pred             CcCCCCCHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccCCCcEEEccCCcEEEEecCCcccc
Q 010713            1 MKFYEGSVGDRMAQLKGGKLSLSNVFRYAIDLAQGILQLHSKGILVLNLKPFNFILNEADRAVLGDVGIPHLL   73 (503)
Q Consensus         1 MEy~~GSL~d~L~~~~~~~Ls~~~vl~i~~QIl~aL~yLHs~gIvHrDLKP~NILld~~~~vKL~DFGla~~~   73 (503)
                      |||+++...        ..++...+..++.|++.+|+|||++||+||||||+|||++++ .++|+|||+|...
T Consensus        89 me~~~~~~~--------~~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~-~~~liDFG~a~~~  152 (191)
T d1zara2          89 MELIDAKEL--------YRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEE-GIWIIDFPQSVEV  152 (191)
T ss_dssp             EECCCCEEG--------GGCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETT-EEEECCCTTCEET
T ss_pred             EEeeccccc--------cchhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCC-CEEEEECCCcccC
Confidence            677776221        224556678899999999999999999999999999999865 5899999998664

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=89.39  E-value=0.086  Score=49.47  Aligned_cols=43  Identities=12%  Similarity=-0.021  Sum_probs=31.2

Q ss_pred             HHHHHHHHHHHHH----CCCeecccCCCcEEEccCCcEEEEecCCcc
Q 010713           29 AIDLAQGILQLHS----KGILVLNLKPFNFILNEADRAVLGDVGIPH   71 (503)
Q Consensus        29 ~~QIl~aL~yLHs----~gIvHrDLKP~NILld~~~~vKL~DFGla~   71 (503)
                      +..+...+...+.    .|+||+|+.++||+++.+...-++||+.+.
T Consensus       166 l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         166 IRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             HHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             HHHHHHhhhccCccccccccccCCcchhhhhcccccceeEecccccc
Confidence            3344444444443    369999999999999988766899999653

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=85.33  E-value=0.15  Score=45.94  Aligned_cols=28  Identities=14%  Similarity=0.112  Sum_probs=23.9

Q ss_pred             CeecccCCCcEEEccCCcEEEEecCCcc
Q 010713           44 ILVLNLKPFNFILNEADRAVLGDVGIPH   71 (503)
Q Consensus        44 IvHrDLKP~NILld~~~~vKL~DFGla~   71 (503)
                      ++|+|+.|.|||+++++.+-|+||+.+.
T Consensus       185 l~HgD~~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T d1j7la_         185 FSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             EECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             EEEeeccCcceeecCCceEEEeechhcc
Confidence            7999999999999876656799998654

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=84.46  E-value=0.15  Score=45.73  Aligned_cols=28  Identities=11%  Similarity=-0.046  Sum_probs=24.1

Q ss_pred             CeecccCCCcEEEccCCcEEEEecCCcc
Q 010713           44 ILVLNLKPFNFILNEADRAVLGDVGIPH   71 (503)
Q Consensus        44 IvHrDLKP~NILld~~~~vKL~DFGla~   71 (503)
                      ++|+|+.|.|||++.+..+-|+||+.+.
T Consensus       177 liHgD~~~~Nvl~~~~~~~~iID~~~~~  204 (255)
T d1nd4a_         177 VTHGDACLPNIMVENGRFSGFIDCGRLG  204 (255)
T ss_dssp             EECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             EEeCCCCCcceEEeCCceEEEEEchhcc
Confidence            7999999999999977667799998653

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=81.41  E-value=0.57  Score=44.10  Aligned_cols=27  Identities=11%  Similarity=0.026  Sum_probs=22.2

Q ss_pred             CCeecccCCCcEEEccCCcEEEEecCCcc
Q 010713           43 GILVLNLKPFNFILNEADRAVLGDVGIPH   71 (503)
Q Consensus        43 gIvHrDLKP~NILld~~~~vKL~DFGla~   71 (503)
                      +++|+|+.+.|||++.+  ..++||+-+.
T Consensus       193 ~liHgDlh~~NvL~~~~--~~~IDFdd~~  219 (325)
T d1zyla1         193 LRLHGDCHAGNILWRDG--PMFVDLDDAR  219 (325)
T ss_dssp             EECCSSCSGGGEEESSS--EEECCCTTCC
T ss_pred             eeecCCCCcccEEEeCC--ceEEechhcc
Confidence            58999999999999743  4589999664