Citrus Sinensis ID: 010820
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 500 | 2.2.26 [Sep-21-2011] | |||||||
| B9SQI7 | 527 | Probable bifunctional met | N/A | no | 0.98 | 0.929 | 0.776 | 0.0 | |
| B9N1F9 | 504 | Probable bifunctional met | yes | no | 0.954 | 0.946 | 0.770 | 0.0 | |
| E0CSI1 | 517 | Probable bifunctional met | yes | no | 0.982 | 0.949 | 0.739 | 0.0 | |
| E0CTF3 | 531 | Probable bifunctional met | no | no | 0.988 | 0.930 | 0.696 | 0.0 | |
| Q9FN41 | 507 | Probable bifunctional met | yes | no | 0.938 | 0.925 | 0.718 | 0.0 | |
| Q2R483 | 518 | Probable bifunctional met | yes | no | 0.956 | 0.922 | 0.677 | 0.0 | |
| B8BKI7 | 518 | Probable bifunctional met | N/A | no | 0.956 | 0.922 | 0.673 | 0.0 | |
| C6JS30 | 517 | Probable bifunctional met | N/A | no | 0.964 | 0.932 | 0.649 | 0.0 | |
| B4G0F3 | 517 | Probable bifunctional met | N/A | no | 0.964 | 0.932 | 0.643 | 0.0 | |
| A9RBS1 | 505 | Probable bifunctional met | N/A | no | 0.918 | 0.908 | 0.61 | 1e-176 |
| >sp|B9SQI7|MTBC_RICCO Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Ricinus communis GN=RCOM_0591060 PE=3 SV=1 | Back alignment and function desciption |
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Score = 806 bits (2083), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/520 (77%), Positives = 441/520 (84%), Gaps = 30/520 (5%)
Query: 7 NGGGGAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKP 66
NGG A +QAYLE +AVKETRVLIS+LCR FY LGWVSGTGGSITIKVHDDSIPKP
Sbjct: 12 NGGVKVA----SQAYLESKAVKETRVLISDLCRQFYNLGWVSGTGGSITIKVHDDSIPKP 67
Query: 67 QQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR 126
QLILMSPSGVQKERMEPEDMYVL+ NG+ LSSPSPKPYPHKPPKCSDC PLF+KAYE
Sbjct: 68 NQLILMSPSGVQKERMEPEDMYVLAANGSILSSPSPKPYPHKPPKCSDCGPLFLKAYEMC 127
Query: 127 DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENEL 186
+AGAVIHSHG+ESCLVTMINP+SKEF+ITHMEMIKGIKGHGYYDELVVPIIENTAYENEL
Sbjct: 128 NAGAVIHSHGMESCLVTMINPLSKEFKITHMEMIKGIKGHGYYDELVVPIIENTAYENEL 187
Query: 187 TDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWST 246
TDSLAKAI+ YPK TAVLVRNHGIY+WGDSWI+AKTQAECYHYLFDAAIKLHQLGLDWST
Sbjct: 188 TDSLAKAIEEYPKTTAVLVRNHGIYIWGDSWISAKTQAECYHYLFDAAIKLHQLGLDWST 247
Query: 247 PNHGPTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLF 306
PNHG +N K +GSN ++NTS KA + S++G P CIVLDIEGTTTPI+FV++VLF
Sbjct: 248 PNHGLIQNVKALIGSNRDINTSVKAGLKDSNHGMQSLPGCIVLDIEGTTTPITFVADVLF 307
Query: 307 PYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEE------ 360
PYARDNVG+HL TY+TAETQDDIKLLR+QVEDDL +GV AV IPP DAGKEE
Sbjct: 308 PYARDNVGRHLYATYETAETQDDIKLLRTQVEDDLARGVNEAVSIPPDDAGKEEVIAALV 367
Query: 361 --------------------GHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSS 400
GHIWRTGF++NELEG V+DDVPEALEKWH+LG KVYIYSS
Sbjct: 368 ANVEAMIKADRKITALKQLQGHIWRTGFQNNELEGVVYDDVPEALEKWHALGIKVYIYSS 427
Query: 401 GSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDV 460
GSRLAQRLIFG +NYGDLRKYLSGFFDT VGNKRET SY+EI+ S+GVD+PSEILFVTDV
Sbjct: 428 GSRLAQRLIFGKTNYGDLRKYLSGFFDTTVGNKRETRSYIEISESVGVDRPSEILFVTDV 487
Query: 461 YQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500
QEA AAK AGLE VISIR GN PLPENHGFKTINS +EI
Sbjct: 488 VQEAVAAKGAGLEAVISIRQGNAPLPENHGFKTINSLSEI 527
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Ricinus communis (taxid: 3988) EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 7EC: 7 |
| >sp|B9N1F9|MTBC_POPTR Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Populus trichocarpa GN=POPTRDRAFT_827604 PE=3 SV=1 | Back alignment and function description |
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Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/515 (77%), Positives = 438/515 (85%), Gaps = 38/515 (7%)
Query: 12 AAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLIL 71
AAA +QAYLE +AVK+TRVLI++LC+ FYTLGWVSGTGGSITIK HDDSIPK QQLIL
Sbjct: 2 AAAKVASQAYLESKAVKDTRVLIADLCKQFYTLGWVSGTGGSITIKAHDDSIPKRQQLIL 61
Query: 72 MSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAV 131
MSPSGVQKERMEPEDMYVL+ NG+ LSSPSPKPYP+KPPKCSDCAPLF+KAY+ R+AGAV
Sbjct: 62 MSPSGVQKERMEPEDMYVLATNGSILSSPSPKPYPYKPPKCSDCAPLFLKAYDMRNAGAV 121
Query: 132 IHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLA 191
IHSHG+ESCLVTMINP+SKEFRITHMEMIKGI+GHGYYDELVVPIIENTAYENELTDSLA
Sbjct: 122 IHSHGMESCLVTMINPLSKEFRITHMEMIKGIQGHGYYDELVVPIIENTAYENELTDSLA 181
Query: 192 KAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGP 251
KAI+AYPK TAVLVRNHGIY+WGDSWI+AKTQAECYHYLFDAAIKLHQ+GLDWSTPNHGP
Sbjct: 182 KAIEAYPKTTAVLVRNHGIYIWGDSWISAKTQAECYHYLFDAAIKLHQIGLDWSTPNHGP 241
Query: 252 TRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLFPYARD 311
+N K+ G N + N PRCIVLDIEGTTTPI+FV++VLFPYARD
Sbjct: 242 IQNVKVKAGMNNSNNRIEP------------LPRCIVLDIEGTTTPITFVADVLFPYARD 289
Query: 312 NVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEE----------- 360
NVG+HLS TYDTAET+DDI LLR+QVEDDL QGV GA+PIP DAGKEE
Sbjct: 290 NVGRHLSATYDTAETKDDINLLRTQVEDDLAQGVDGAIPIPTDDAGKEEVIAALVANVEA 349
Query: 361 ---------------GHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLA 405
GHIWRTG+E+NELEG V+DDVPEALEKWH+LG KVYIYSSGSRLA
Sbjct: 350 MIKADRKITALKQLQGHIWRTGYENNELEGVVYDDVPEALEKWHALGIKVYIYSSGSRLA 409
Query: 406 QRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEAT 465
QRLIFG +NYGDLRKYLSGFFDT VGNK+ET SY+EI+ SLGVDKPS+ILFVTDV+QEA
Sbjct: 410 QRLIFGKTNYGDLRKYLSGFFDTTVGNKKETRSYIEISESLGVDKPSDILFVTDVFQEAF 469
Query: 466 AAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500
AAK AGL+V+ISIRPGN PLPENHGFKTI SFAEI
Sbjct: 470 AAKGAGLDVMISIRPGNAPLPENHGFKTITSFAEI 504
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Populus trichocarpa (taxid: 3694) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 7 EC: 7 |
| >sp|E0CSI1|MTBC1_VITVI Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 OS=Vitis vinifera GN=VIT_19s0014g02480 PE=2 SV=2 | Back alignment and function description |
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Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/526 (73%), Positives = 440/526 (83%), Gaps = 35/526 (6%)
Query: 1 MATLAVNGGGGAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHD 60
MA A+NG AA +QAYLE V +TR L+S+LCRHFY LGWVSGTGGSITIKVHD
Sbjct: 1 MAAAALNGLKMAAT---SQAYLESMPVNDTRKLLSDLCRHFYGLGWVSGTGGSITIKVHD 57
Query: 61 DSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFM 120
+SIPKPQQLI+MSPSGVQKERM PEDMYVLS +G LSSPSPKPYP+KPPKCSDCAPLFM
Sbjct: 58 ESIPKPQQLIVMSPSGVQKERMVPEDMYVLSPSGCFLSSPSPKPYPNKPPKCSDCAPLFM 117
Query: 121 KAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT 180
KAY R+AGAVIHSHG+ESC+VTMI+P+SKEFRITHMEMIKGI+GHGYYDELVVPIIENT
Sbjct: 118 KAYLMRNAGAVIHSHGMESCIVTMIDPLSKEFRITHMEMIKGIQGHGYYDELVVPIIENT 177
Query: 181 AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL 240
A+E ELTD+LA+AI+AYPK TAVLVRNHGIY+WGDSWI+AKTQAECYHYLFDAAIKL+QL
Sbjct: 178 AHERELTDALAEAIEAYPKTTAVLVRNHGIYIWGDSWIHAKTQAECYHYLFDAAIKLYQL 237
Query: 241 GLDWSTPNHGPTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISF 300
GLDWSTP+HGP + + G N S KA T S++ + RCIVLDIEGTTTPISF
Sbjct: 238 GLDWSTPDHGPIKKY------GGKTNMSVKAGTVNSNHETEPSRRCIVLDIEGTTTPISF 291
Query: 301 VSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEE 360
V++VLFP+AR+NV +HL+ TY+T ETQDDIKLLR+QV+ DL+QG+ GAVPIPP DAGKEE
Sbjct: 292 VTDVLFPFARNNVSRHLAATYETDETQDDIKLLRTQVQSDLEQGIVGAVPIPPDDAGKEE 351
Query: 361 --------------------------GHIWRTGFESNELEGEVFDDVPEALEKWHSLGTK 394
GHIWRTGF++NELEG VF+DVPEAL+KWH+ G K
Sbjct: 352 VIAALVANVEAMIKADRKITALKQLQGHIWRTGFQNNELEGVVFEDVPEALQKWHASGIK 411
Query: 395 VYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 454
VYIYSSGSRLAQRL+FG +NYGDLRKYL GFFDT VGNKRET SYVEIT S+GVDKPSEI
Sbjct: 412 VYIYSSGSRLAQRLLFGYTNYGDLRKYLCGFFDTTVGNKRETKSYVEITESVGVDKPSEI 471
Query: 455 LFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500
LFVTDVYQEA AAKAAGLEV+ISIRPGNGPLP+NHGFKTI SF++I
Sbjct: 472 LFVTDVYQEAVAAKAAGLEVIISIRPGNGPLPDNHGFKTITSFSDI 517
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Vitis vinifera (taxid: 29760) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 7 EC: 7 |
| >sp|E0CTF3|MTBC2_VITVI Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 2 OS=Vitis vinifera GN=VIT_12s0028g03470 PE=2 SV=2 | Back alignment and function description |
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Score = 751 bits (1938), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/521 (69%), Positives = 411/521 (78%), Gaps = 27/521 (5%)
Query: 6 VNGGGGAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPK 65
VNG A+ Y+E R V+E RVL SELCRH YTLGW SGTGGSITIKVHDDSIPK
Sbjct: 12 VNGNEVGTTASFA-GYMETRGVREARVLASELCRHMYTLGWFSGTGGSITIKVHDDSIPK 70
Query: 66 PQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEK 125
P+QL+++SPSGVQKERM PEDMYVLS +G LS+P KPYPHKPPKC+DC PLFMK YE
Sbjct: 71 PRQLVVISPSGVQKERMVPEDMYVLSSDGFILSTPPLKPYPHKPPKCTDCTPLFMKVYEM 130
Query: 126 RDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENE 185
RDAGAVIHSHG+ESC+VTMI P SKEFRITHMEMIKGIKGHGY+DELVVPIIENTA+E E
Sbjct: 131 RDAGAVIHSHGMESCIVTMILPFSKEFRITHMEMIKGIKGHGYHDELVVPIIENTAHEAE 190
Query: 186 LTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWS 245
L +SL +AI AYPK TAVLVRNHG+YVWGDSWI+AKTQAECYHYLFDAAIKLHQLGLDWS
Sbjct: 191 LVESLTEAITAYPKTTAVLVRNHGVYVWGDSWISAKTQAECYHYLFDAAIKLHQLGLDWS 250
Query: 246 TPNHGPTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVL 305
TP HGP R+ G NG ++ K D RCI+LDIEGTTTPISFV++VL
Sbjct: 251 TPTHGPIRSINGIWGCNGTMSRGLKVGGLSLDDMIEPSQRCILLDIEGTTTPISFVTDVL 310
Query: 306 FPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKE------ 359
FPYA NVGKHL+ T+D+ ETQDDI LLRSQ++ DL+ GV GAVPIPP GKE
Sbjct: 311 FPYAHANVGKHLAATFDSEETQDDINLLRSQIQHDLEHGVVGAVPIPPDYVGKELVIASF 370
Query: 360 --------------------EGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYS 399
+GHIW+TGF+SNEL G VFDDVPEALE+WH+ G KVYIYS
Sbjct: 371 VANVEAMIRADRNITALKQLQGHIWKTGFQSNELVGVVFDDVPEALERWHASGIKVYIYS 430
Query: 400 SGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTD 459
SGSR AQ+LIF NSNYGDLRKY GFFDT +GNK+ET SY EI ++G+D+PS++LFVTD
Sbjct: 431 SGSREAQQLIFSNSNYGDLRKYFCGFFDTTMGNKKETHSYFEILRTVGIDRPSDMLFVTD 490
Query: 460 VYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500
V+QEA AA+AAGLEVVISIRPGNGPLPENHGF+TI +F EI
Sbjct: 491 VFQEAVAARAAGLEVVISIRPGNGPLPENHGFRTIETFLEI 531
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Vitis vinifera (taxid: 29760) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 7 EC: 7 |
| >sp|Q9FN41|MTBC_ARATH Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Arabidopsis thaliana GN=At5g53850 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/508 (71%), Positives = 423/508 (83%), Gaps = 39/508 (7%)
Query: 19 QAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQ 78
QAYLEG+ VKET L++ELCRHFYT GWVSGTGGSIT+KVHD SIPKP+QLI+MSPSGVQ
Sbjct: 13 QAYLEGKEVKETSSLVTELCRHFYTQGWVSGTGGSITMKVHDASIPKPEQLIVMSPSGVQ 72
Query: 79 KERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIE 138
KERM+PEDMY+LS NG+ +S+PSPKPYP+KPPKC+DCAPLFMKAYE R+AGAVIHSHG+E
Sbjct: 73 KERMQPEDMYILSANGSIISTPSPKPYPNKPPKCTDCAPLFMKAYEMRNAGAVIHSHGME 132
Query: 139 SCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAIDAYP 198
SCLVTM+NP +KEFRITHMEMIKGI+GHGYYDELVVPIIENTAYENELTDSL KAI+AYP
Sbjct: 133 SCLVTMLNPQAKEFRITHMEMIKGIQGHGYYDELVVPIIENTAYENELTDSLTKAIEAYP 192
Query: 199 KATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKLG 258
KATAVLVRNHG+Y+WGDSWI+AKTQAECYHYLFDAAIKLHQLGLD +TP+HGP R
Sbjct: 193 KATAVLVRNHGVYIWGDSWIHAKTQAECYHYLFDAAIKLHQLGLDAATPDHGPIRR---- 248
Query: 259 LGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLS 318
+++ K S Y R IVLDIEGTTTPI+FV++VLFPYAR+NVGKHL+
Sbjct: 249 -----TIHSQIK----DSQYEREWPRRWIVLDIEGTTTPITFVTDVLFPYARENVGKHLN 299
Query: 319 VTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKE------------------- 359
+TY TAETQ+DIKLLR+QVE+DL++GV GAVPIP D GKE
Sbjct: 300 LTYHTAETQEDIKLLRAQVEEDLREGVTGAVPIPHADEGKEKVIAAMVSNVEAMIRADRK 359
Query: 360 -------EGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN 412
+GHIWRTGFE +EL+ VF+DV +ALEKWHS G KVYIYSSGSRLAQ+L+FGN
Sbjct: 360 ITALKELQGHIWRTGFECDELKAIVFEDVADALEKWHSSGIKVYIYSSGSRLAQKLLFGN 419
Query: 413 SNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGL 472
++YGDLRKY+SGFFDT +GNK+E+ SY EI +LGVD P+EI+FVTDVYQEA AAKAAGL
Sbjct: 420 TDYGDLRKYISGFFDTTIGNKKESRSYKEIKETLGVDDPAEIMFVTDVYQEAVAAKAAGL 479
Query: 473 EVVISIRPGNGPLPENHGFKTINSFAEI 500
E +ISIRPGN PLPENHGFKT+ SF++I
Sbjct: 480 EAIISIRPGNAPLPENHGFKTVTSFSQI 507
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Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 7 EC: 7 |
| >sp|Q2R483|MTBC_ORYSJ Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Oryza sativa subsp. japonica GN=Os11g0484000 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/511 (67%), Positives = 404/511 (79%), Gaps = 33/511 (6%)
Query: 16 THTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPS 75
T ++AYLEG AV+E R L++ELCRHFY GWV+GTGGSIT+K +D ++P QLI+MSPS
Sbjct: 15 TESEAYLEGEAVREARELVAELCRHFYGQGWVTGTGGSITVKANDPALPLADQLIVMSPS 74
Query: 76 GVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSH 135
GVQKERM EDMYVLS +G LSSP KP+P+KPPKC+DCAPLFMKAY R AGAVIHSH
Sbjct: 75 GVQKERMVAEDMYVLSADGKVLSSPVSKPWPNKPPKCTDCAPLFMKAYLMRGAGAVIHSH 134
Query: 136 GIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAID 195
G+E+C+ TM++P +KEFR+THMEMIKGIKGHGY DELVVPIIENT YE ELTDSLA+AI
Sbjct: 135 GMETCIATMLDPGAKEFRMTHMEMIKGIKGHGYRDELVVPIIENTPYEYELTDSLAEAIA 194
Query: 196 AYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNF 255
AYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKL+QLG+DW+TP HGP +
Sbjct: 195 AYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLYQLGIDWTTPEHGPINSA 254
Query: 256 KLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGK 315
K + + ++ S + C+VLDIEGTTTPISFV++V+FPYARDNV K
Sbjct: 255 KRPRSVLSSSIPNGCPDSKSSKH-------CVVLDIEGTTTPISFVTDVMFPYARDNVRK 307
Query: 316 HLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEE--------------- 360
HL+ TY + ET++DIKLLR QVE+DLK G+ G+VPIPP DA KEE
Sbjct: 308 HLTSTYSSDETKEDIKLLRIQVEEDLKNGIVGSVPIPPDDADKEEVINALVANVESMIKA 367
Query: 361 -----------GHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLI 409
GHIWRTGFES EL+G VFDDVPEAL+ WH+ G KVYIYSSGSR AQRL+
Sbjct: 368 DRKITSLKQLQGHIWRTGFESKELQGVVFDDVPEALKHWHASGMKVYIYSSGSREAQRLL 427
Query: 410 FGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKA 469
FGN+ YGDLR+YL GFFDT GNKRET SY EI+ SLGVD P++ILF+TDV+QEA AAK+
Sbjct: 428 FGNTAYGDLRQYLCGFFDTTTGNKRETRSYFEISQSLGVDSPAQILFITDVFQEAVAAKS 487
Query: 470 AGLEVVISIRPGNGPLPENHGFKTINSFAEI 500
AG EV+ISIRPGN PLPENHGF+TI SF+EI
Sbjct: 488 AGFEVIISIRPGNAPLPENHGFRTIKSFSEI 518
|
Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 7 EC: 7 |
| >sp|B8BKI7|MTBC_ORYSI Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Oryza sativa subsp. indica GN=OsI_36120 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/511 (67%), Positives = 402/511 (78%), Gaps = 33/511 (6%)
Query: 16 THTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPS 75
T ++AYLEG AV+E R L++ELCRHFY GWV+GT GSIT+K +D ++P QLI+MSPS
Sbjct: 15 TESEAYLEGEAVREARELVAELCRHFYGQGWVTGTVGSITVKANDPALPLADQLIVMSPS 74
Query: 76 GVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSH 135
GVQKERM EDMYVLS +G LSSP KP+P+KPPKC+DCAPLFMKAY R AGAVIHSH
Sbjct: 75 GVQKERMVAEDMYVLSADGKVLSSPVSKPWPNKPPKCTDCAPLFMKAYLMRGAGAVIHSH 134
Query: 136 GIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAID 195
G+E+C+ TM++ +KEFR+THMEMIKGIKGHGY DELVVPIIENT YE ELTDSLA+AI
Sbjct: 135 GMETCIATMLDHGAKEFRMTHMEMIKGIKGHGYRDELVVPIIENTPYEYELTDSLAEAIA 194
Query: 196 AYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNF 255
AYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKL+QLG+DW+TP HGP +
Sbjct: 195 AYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLYQLGIDWTTPEHGPINSA 254
Query: 256 KLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGK 315
K + + ++ S + C+VLDIEGTTTPISFV++V+FPYARDNV K
Sbjct: 255 KRPRSVLSSSIPNGCPDSKSSKH-------CVVLDIEGTTTPISFVTDVMFPYARDNVRK 307
Query: 316 HLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEE--------------- 360
HL+ TY + ET++DIKLLR QVE+DLK G+ G+VPIPP DA KEE
Sbjct: 308 HLTSTYSSDETKEDIKLLRIQVEEDLKNGIVGSVPIPPDDADKEEVINALVANVESMIKA 367
Query: 361 -----------GHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLI 409
GHIWRTGFES EL+G VFDDVPEAL+ WH+ G KVYIYSSGSR AQRL+
Sbjct: 368 DRKITSLKQLQGHIWRTGFESKELQGVVFDDVPEALKHWHASGMKVYIYSSGSREAQRLL 427
Query: 410 FGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKA 469
FGN+ YGDLR+YL GFFDT GNKRET SY EI+ SLGVD P++ILF+TDV+QEA AAK+
Sbjct: 428 FGNTAYGDLRQYLCGFFDTTTGNKRETRSYFEISQSLGVDSPAQILFITDVFQEAVAAKS 487
Query: 470 AGLEVVISIRPGNGPLPENHGFKTINSFAEI 500
AG EV+ISIRPGN PLPENHGF+TI SF+EI
Sbjct: 488 AGFEVIISIRPGNAPLPENHGFRTIKSFSEI 518
|
Oryza sativa subsp. indica (taxid: 39946) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 7 EC: 7 |
| >sp|C6JS30|MTBC_SORBI Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Sorghum bicolor GN=SORBIDRAFT_0019s002010 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/516 (64%), Positives = 402/516 (77%), Gaps = 34/516 (6%)
Query: 11 GAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLI 70
A AT ++AYLEG V+E R L++ELCRHFY GWV+GTGGSIT+KV+D ++P +LI
Sbjct: 10 AAVGATASEAYLEGEPVREARELVAELCRHFYAQGWVTGTGGSITVKVNDPAVPLADRLI 69
Query: 71 LMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGA 130
+MSPSGVQKERM EDMYV++ +G LS+P KP+P+KPPKC+DCAPLFMKAY R AGA
Sbjct: 70 VMSPSGVQKERMVAEDMYVMAADGKVLSAPVAKPWPNKPPKCTDCAPLFMKAYLMRGAGA 129
Query: 131 VIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSL 190
VIHSHG+E+C+ TM+NP +KEFR+THMEMIKGIKGHGY DELV+PI+ENT YE ELTDSL
Sbjct: 130 VIHSHGMETCIATMLNPGAKEFRMTHMEMIKGIKGHGYRDELVIPIVENTPYEYELTDSL 189
Query: 191 AKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHG 250
++AI AYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYL DA IKL+QLG+DW+TP HG
Sbjct: 190 SEAIAAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLLDACIKLYQLGIDWTTPEHG 249
Query: 251 PTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLFPYAR 310
P N K + + + G +C+VLDIEGTTTPISFV++V+FPYAR
Sbjct: 250 PINNAKR------QRSILSSEIPNGCRAADS--SKCVVLDIEGTTTPISFVTDVMFPYAR 301
Query: 311 DNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEE---------- 360
DNV +HL+ T+D+ ET+DDIKLLR Q+EDDL+ G++GAVP+PP +AGKEE
Sbjct: 302 DNVREHLTSTFDSEETKDDIKLLRIQIEDDLRNGISGAVPVPPDEAGKEEVINSLVANVE 361
Query: 361 ----------------GHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRL 404
GHIWRTGFE EL+G VF+DVP AL+ WHS G KVYIYSSGSR
Sbjct: 362 SMIKADRKITPLKQLQGHIWRTGFEKKELQGVVFEDVPVALKNWHSSGIKVYIYSSGSRE 421
Query: 405 AQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEA 464
AQRL+FGN+ YGDLRK+L G+FDT GNKRET SY E++ SLGVD PS+ILF+TDV+QEA
Sbjct: 422 AQRLLFGNTTYGDLRKFLCGYFDTTTGNKRETRSYFEVSQSLGVDSPSQILFITDVFQEA 481
Query: 465 TAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500
AAK G EV+ISIRPGN PLP+NHGF+TI SF+EI
Sbjct: 482 VAAKNTGFEVIISIRPGNAPLPDNHGFRTIKSFSEI 517
|
Sorghum bicolor (taxid: 4558) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 7 EC: 7 |
| >sp|B4G0F3|MTBC_MAIZE Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Zea mays PE=2 SV=1 | Back alignment and function description |
|---|
Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/516 (64%), Positives = 398/516 (77%), Gaps = 34/516 (6%)
Query: 11 GAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLI 70
A A ++AYLEG V+E R L++ELCRHFY GWV+GTGGSIT+KV+D ++P +LI
Sbjct: 10 AAVGAMASEAYLEGAPVREARELVAELCRHFYAQGWVTGTGGSITVKVNDPTVPLADRLI 69
Query: 71 LMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGA 130
+MSPSGVQKERM EDMYV++ +G LS+P KP+P+KPPKC+DCAPLFMKAY R AGA
Sbjct: 70 VMSPSGVQKERMVAEDMYVMAADGKVLSAPVAKPWPNKPPKCTDCAPLFMKAYLMRGAGA 129
Query: 131 VIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSL 190
VIHSHGIE+C+ TM+ P +KEFR+THMEMIKGIKGHGY+DELV+PIIENT YE ELTDSL
Sbjct: 130 VIHSHGIETCIATMLIPGAKEFRVTHMEMIKGIKGHGYHDELVIPIIENTPYEYELTDSL 189
Query: 191 AKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHG 250
++AI AYPKATAVLVRNHGIYVWG+SWINAKTQAECYHYL DA IKL+QLG+DW+TP HG
Sbjct: 190 SEAIAAYPKATAVLVRNHGIYVWGESWINAKTQAECYHYLLDACIKLYQLGIDWTTPEHG 249
Query: 251 PTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLFPYAR 310
N + + + + G +C+VLDIEGTTTPISFV++V+FPYAR
Sbjct: 250 SINNPRRPH------SILSPEICNGCHAADS--SKCVVLDIEGTTTPISFVTDVMFPYAR 301
Query: 311 DNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEE---------- 360
DNV KHL+ T+D ET++DIKLLR Q+EDDL+ GVAGAVP+PP + GKEE
Sbjct: 302 DNVRKHLTSTFDFEETKEDIKLLRIQIEDDLQNGVAGAVPVPPDEGGKEEVINSLVANVE 361
Query: 361 ----------------GHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRL 404
GHIWR GF+ EL+G VF+DVP AL+ WH+ G KVYIYSSGSR
Sbjct: 362 SMIKADRKITSLKQLQGHIWRIGFQKKELQGVVFEDVPVALKNWHASGIKVYIYSSGSRE 421
Query: 405 AQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEA 464
AQRL+FGN+ YGDLRK+L G+FDT GNKRET SY EI+ SLGVD PS+ILF+TDV+QEA
Sbjct: 422 AQRLLFGNTTYGDLRKFLCGYFDTTTGNKRETRSYFEISQSLGVDSPSQILFITDVFQEA 481
Query: 465 TAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500
AAK AG EV+ISIRPGN PLP+NHGF+TI SF+EI
Sbjct: 482 IAAKNAGFEVIISIRPGNAPLPDNHGFRTIKSFSEI 517
|
Zea mays (taxid: 4577) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 7 EC: 7 |
| >sp|A9RBS1|MTBC_PHYPA Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_111231 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 617 bits (1592), Expect = e-176, Method: Compositional matrix adjust.
Identities = 305/500 (61%), Positives = 364/500 (72%), Gaps = 41/500 (8%)
Query: 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPED 86
V++T+ L +ELC+HFY GWVSGTGGSIT+KV + + ++LI+M+PSGVQKERM P D
Sbjct: 21 VEDTKDLAAELCKHFYNQGWVSGTGGSITLKVLESDVDVQERLIVMAPSGVQKERMLPVD 80
Query: 87 MYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMIN 146
MYVLS +GT LS+P K PHKPPKCS+C PLF+KAY+ R+AGAVIHSHG+ESCL TMIN
Sbjct: 81 MYVLSSDGTVLSAPPAKGAPHKPPKCSECCPLFLKAYKMRNAGAVIHSHGLESCLATMIN 140
Query: 147 PMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVR 206
P +KEFRITHMEMIKGI GHGYYDELVVPIIEN+A E ELTD+LA A++AYPKATAVLVR
Sbjct: 141 PTAKEFRITHMEMIKGIAGHGYYDELVVPIIENSAREYELTDALAAAMEAYPKATAVLVR 200
Query: 207 NHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKLGLGSNGNVN 266
NHGIY+WGDSWI+AKTQAECYHYLF+AA+KLHQLGLD + HGP + L N
Sbjct: 201 NHGIYIWGDSWISAKTQAECYHYLFNAALKLHQLGLDPADAKHGPLTRPQT-LPDFANKR 259
Query: 267 TSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAET 326
++K V VLDIEGTTTPISFV+EVLFPYAR+NV TY++ ET
Sbjct: 260 ATSKNV--------------FVLDIEGTTTPISFVTEVLFPYARENVSSFFKSTYNSPET 305
Query: 327 QDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKE--------------------------E 360
+DI+LLR QV +DL+ V GA IP AG + +
Sbjct: 306 LNDIRLLRDQVHEDLRNNVPGATEIPVESAGIDAVVAAIEKNVQAMIKADRKVTALKELQ 365
Query: 361 GHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK 420
GHIWR G+E+ EL+G VF+DVPEAL KW + G K YIYSSGSR AQ+LIFGN+N+GDLR
Sbjct: 366 GHIWRIGYENGELKGSVFEDVPEALAKWDARGIKTYIYSSGSREAQKLIFGNTNFGDLRV 425
Query: 421 YLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480
YLSGFFDT +G+KRE SY EI +LGVD PS I F TDV EA AAK AGL+ V+ +RP
Sbjct: 426 YLSGFFDTTIGHKREARSYKEIFLTLGVDHPSCITFATDVLAEAVAAKEAGLQAVLLLRP 485
Query: 481 GNGPLPENHGFKTINSFAEI 500
GN PLP +HGF+T S E+
Sbjct: 486 GNAPLPSDHGFRTAKSLLEL 505
|
Physcomitrella patens subsp. patens (taxid: 145481) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 7 EC: 7 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 500 | ||||||
| 356544052 | 522 | PREDICTED: probable bifunctional methylt | 0.992 | 0.950 | 0.768 | 0.0 | |
| 255574694 | 527 | catalytic, putative [Ricinus communis] g | 0.98 | 0.929 | 0.776 | 0.0 | |
| 356549714 | 522 | PREDICTED: probable bifunctional methylt | 0.992 | 0.950 | 0.754 | 0.0 | |
| 224128103 | 504 | predicted protein [Populus trichocarpa] | 0.954 | 0.946 | 0.770 | 0.0 | |
| 388513301 | 523 | unknown [Medicago truncatula] | 0.99 | 0.946 | 0.756 | 0.0 | |
| 356517132 | 518 | PREDICTED: probable bifunctional methylt | 0.974 | 0.940 | 0.765 | 0.0 | |
| 449446923 | 512 | PREDICTED: probable bifunctional methylt | 0.972 | 0.949 | 0.728 | 0.0 | |
| 356517134 | 509 | PREDICTED: probable bifunctional methylt | 0.956 | 0.939 | 0.761 | 0.0 | |
| 378405187 | 517 | RecName: Full=Probable bifunctional meth | 0.982 | 0.949 | 0.739 | 0.0 | |
| 225461486 | 544 | PREDICTED: probable bifunctional methylt | 0.982 | 0.902 | 0.739 | 0.0 |
| >gi|356544052|ref|XP_003540469.1| PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/526 (76%), Positives = 448/526 (85%), Gaps = 30/526 (5%)
Query: 1 MATLAVNGGGGAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHD 60
MA + +NG T +QAYLEG+AVKETR L++ELCRHFYTLGWV+GTGGSI++KVHD
Sbjct: 1 MAAIGLNGV--KVGTTSSQAYLEGKAVKETRALMAELCRHFYTLGWVTGTGGSISMKVHD 58
Query: 61 DSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFM 120
DSIPKPQQLILM+PSGVQKERMEPEDMYVLS +G+ LS+PSPKP+PHKPPKCSDC PLF
Sbjct: 59 DSIPKPQQLILMAPSGVQKERMEPEDMYVLSHSGSVLSAPSPKPWPHKPPKCSDCDPLFK 118
Query: 121 KAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT 180
KAYE RDA AV HSHGIESCLVTMINP+SKEFRITHMEMIKGIKGHGYYDELVVPIIENT
Sbjct: 119 KAYEMRDAAAVFHSHGIESCLVTMINPLSKEFRITHMEMIKGIKGHGYYDELVVPIIENT 178
Query: 181 AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL 240
AYE +LT+S AKAI+ YPKATAVLVRNHG++VWGDSWI+AKTQ+ECYHYLFDAA+KLHQ+
Sbjct: 179 AYEYQLTESFAKAIEDYPKATAVLVRNHGVFVWGDSWISAKTQSECYHYLFDAALKLHQM 238
Query: 241 GLDWSTPNHGPTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISF 300
GLDWSTPNHGP ++ + GL G N S KA D S FPRC+VLDIEGTTTPISF
Sbjct: 239 GLDWSTPNHGPIQSARRGLSIAGESNVSVKARKSNGD--SDPFPRCVVLDIEGTTTPISF 296
Query: 301 VSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEE 360
VSEVLFPYARDNVG+HLS+TYDT ET+ DIKLL SQV+ DL+QG+AGAVPIPP DAGKEE
Sbjct: 297 VSEVLFPYARDNVGRHLSLTYDTPETKADIKLLCSQVQSDLEQGIAGAVPIPPDDAGKEE 356
Query: 361 --------------------------GHIWRTGFESNELEGEVFDDVPEALEKWHSLGTK 394
GHIWRTG+E+NELEG VFDDVPEALEKWH+LG K
Sbjct: 357 VVAALVANVNAMIKADRKITALKELQGHIWRTGYENNELEGIVFDDVPEALEKWHTLGIK 416
Query: 395 VYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 454
VYIYSSGSRLAQRLIFG +N+GDLRKYLSGFFDT VGNKRET SYVEI+ SLGVDKPS+I
Sbjct: 417 VYIYSSGSRLAQRLIFGKTNHGDLRKYLSGFFDTTVGNKRETRSYVEISESLGVDKPSDI 476
Query: 455 LFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500
LFVTDVYQEATAAKAAGLEV+ISIRPGNGPLP+NHGFKTI SF+EI
Sbjct: 477 LFVTDVYQEATAAKAAGLEVIISIRPGNGPLPDNHGFKTIKSFSEI 522
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255574694|ref|XP_002528256.1| catalytic, putative [Ricinus communis] gi|296439679|sp|B9SQI7.1|MTBC_RICCO RecName: Full=Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; Includes: RecName: Full=Methylthioribulose-1-phosphate dehydratase; Short=MTRu-1-P dehydratase; Includes: RecName: Full=Enolase-phosphatase E1; AltName: Full=2,3-diketo-5-methylthio-1-phosphopentane phosphatase gi|223532342|gb|EEF34141.1| catalytic, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 806 bits (2083), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/520 (77%), Positives = 441/520 (84%), Gaps = 30/520 (5%)
Query: 7 NGGGGAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKP 66
NGG A +QAYLE +AVKETRVLIS+LCR FY LGWVSGTGGSITIKVHDDSIPKP
Sbjct: 12 NGGVKVA----SQAYLESKAVKETRVLISDLCRQFYNLGWVSGTGGSITIKVHDDSIPKP 67
Query: 67 QQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR 126
QLILMSPSGVQKERMEPEDMYVL+ NG+ LSSPSPKPYPHKPPKCSDC PLF+KAYE
Sbjct: 68 NQLILMSPSGVQKERMEPEDMYVLAANGSILSSPSPKPYPHKPPKCSDCGPLFLKAYEMC 127
Query: 127 DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENEL 186
+AGAVIHSHG+ESCLVTMINP+SKEF+ITHMEMIKGIKGHGYYDELVVPIIENTAYENEL
Sbjct: 128 NAGAVIHSHGMESCLVTMINPLSKEFKITHMEMIKGIKGHGYYDELVVPIIENTAYENEL 187
Query: 187 TDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWST 246
TDSLAKAI+ YPK TAVLVRNHGIY+WGDSWI+AKTQAECYHYLFDAAIKLHQLGLDWST
Sbjct: 188 TDSLAKAIEEYPKTTAVLVRNHGIYIWGDSWISAKTQAECYHYLFDAAIKLHQLGLDWST 247
Query: 247 PNHGPTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLF 306
PNHG +N K +GSN ++NTS KA + S++G P CIVLDIEGTTTPI+FV++VLF
Sbjct: 248 PNHGLIQNVKALIGSNRDINTSVKAGLKDSNHGMQSLPGCIVLDIEGTTTPITFVADVLF 307
Query: 307 PYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEE------ 360
PYARDNVG+HL TY+TAETQDDIKLLR+QVEDDL +GV AV IPP DAGKEE
Sbjct: 308 PYARDNVGRHLYATYETAETQDDIKLLRTQVEDDLARGVNEAVSIPPDDAGKEEVIAALV 367
Query: 361 --------------------GHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSS 400
GHIWRTGF++NELEG V+DDVPEALEKWH+LG KVYIYSS
Sbjct: 368 ANVEAMIKADRKITALKQLQGHIWRTGFQNNELEGVVYDDVPEALEKWHALGIKVYIYSS 427
Query: 401 GSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDV 460
GSRLAQRLIFG +NYGDLRKYLSGFFDT VGNKRET SY+EI+ S+GVD+PSEILFVTDV
Sbjct: 428 GSRLAQRLIFGKTNYGDLRKYLSGFFDTTVGNKRETRSYIEISESVGVDRPSEILFVTDV 487
Query: 461 YQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500
QEA AAK AGLE VISIR GN PLPENHGFKTINS +EI
Sbjct: 488 VQEAVAAKGAGLEAVISIRQGNAPLPENHGFKTINSLSEI 527
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356549714|ref|XP_003543236.1| PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/526 (75%), Positives = 446/526 (84%), Gaps = 30/526 (5%)
Query: 1 MATLAVNGGGGAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHD 60
MA + +NG T +QAYLEG+AVKETR L++ELCRHFYTLGWV+GTGGSI++KVHD
Sbjct: 1 MAAIGLNGV--KVGTTSSQAYLEGKAVKETRALMAELCRHFYTLGWVTGTGGSISMKVHD 58
Query: 61 DSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFM 120
DSIP+PQQLILM+PSGVQKERMEPEDMYVLS +G+ LS+PSPKP+PHKPPKCSDC PLF
Sbjct: 59 DSIPRPQQLILMAPSGVQKERMEPEDMYVLSHSGSVLSAPSPKPWPHKPPKCSDCDPLFK 118
Query: 121 KAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT 180
KAYE DA AV HSHGIESCLVTMINP+SKEFRITHMEMIKGIKGHGYYDELVVPIIENT
Sbjct: 119 KAYEMCDAAAVFHSHGIESCLVTMINPLSKEFRITHMEMIKGIKGHGYYDELVVPIIENT 178
Query: 181 AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL 240
AYE +LT+S AKAI+ YPKATAVLVRNHG++VWGDSWI+AKTQ+ECYHYLFDAA+KLHQ+
Sbjct: 179 AYEYQLTESFAKAIEDYPKATAVLVRNHGVFVWGDSWISAKTQSECYHYLFDAALKLHQM 238
Query: 241 GLDWSTPNHGPTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISF 300
GLDWSTPNHGP ++ + GL G N S KA D S PRC+VLDIEGTTTPISF
Sbjct: 239 GLDWSTPNHGPIQSARRGLSIAGESNVSVKARKSNGD--SDPLPRCVVLDIEGTTTPISF 296
Query: 301 VSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEE 360
VSEVLFPYARDNVG+HLS+TYDT ET+ DIKLLRSQV+ DL+QG+AGAVPIPP DAGK+E
Sbjct: 297 VSEVLFPYARDNVGRHLSLTYDTPETKADIKLLRSQVQSDLEQGIAGAVPIPPDDAGKQE 356
Query: 361 --------------------------GHIWRTGFESNELEGEVFDDVPEALEKWHSLGTK 394
GHIW+TG+E+NELEG V+DDVPEALEKWH+LG K
Sbjct: 357 VIAALVANVDAMIKADRKITALKELQGHIWKTGYENNELEGIVYDDVPEALEKWHALGIK 416
Query: 395 VYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 454
VYIYSSGSRLAQRLIFG +N+GDLRKYLSGFFDT VGNKRET SYVEI+ SLGV+KPS+I
Sbjct: 417 VYIYSSGSRLAQRLIFGKTNHGDLRKYLSGFFDTTVGNKRETRSYVEISESLGVEKPSDI 476
Query: 455 LFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500
LFVTDVYQEATAA AAGLEV+ISIRPGNGPLP+NHGFKTI SF+EI
Sbjct: 477 LFVTDVYQEATAATAAGLEVIISIRPGNGPLPDNHGFKTIKSFSEI 522
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224128103|ref|XP_002329082.1| predicted protein [Populus trichocarpa] gi|296439678|sp|B9N1F9.1|MTBC_POPTR RecName: Full=Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; Includes: RecName: Full=Methylthioribulose-1-phosphate dehydratase; Short=MTRu-1-P dehydratase; Includes: RecName: Full=Enolase-phosphatase E1; AltName: Full=2,3-diketo-5-methylthio-1-phosphopentane phosphatase gi|222869751|gb|EEF06882.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/515 (77%), Positives = 438/515 (85%), Gaps = 38/515 (7%)
Query: 12 AAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLIL 71
AAA +QAYLE +AVK+TRVLI++LC+ FYTLGWVSGTGGSITIK HDDSIPK QQLIL
Sbjct: 2 AAAKVASQAYLESKAVKDTRVLIADLCKQFYTLGWVSGTGGSITIKAHDDSIPKRQQLIL 61
Query: 72 MSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAV 131
MSPSGVQKERMEPEDMYVL+ NG+ LSSPSPKPYP+KPPKCSDCAPLF+KAY+ R+AGAV
Sbjct: 62 MSPSGVQKERMEPEDMYVLATNGSILSSPSPKPYPYKPPKCSDCAPLFLKAYDMRNAGAV 121
Query: 132 IHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLA 191
IHSHG+ESCLVTMINP+SKEFRITHMEMIKGI+GHGYYDELVVPIIENTAYENELTDSLA
Sbjct: 122 IHSHGMESCLVTMINPLSKEFRITHMEMIKGIQGHGYYDELVVPIIENTAYENELTDSLA 181
Query: 192 KAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGP 251
KAI+AYPK TAVLVRNHGIY+WGDSWI+AKTQAECYHYLFDAAIKLHQ+GLDWSTPNHGP
Sbjct: 182 KAIEAYPKTTAVLVRNHGIYIWGDSWISAKTQAECYHYLFDAAIKLHQIGLDWSTPNHGP 241
Query: 252 TRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLFPYARD 311
+N K+ G N + N PRCIVLDIEGTTTPI+FV++VLFPYARD
Sbjct: 242 IQNVKVKAGMNNSNNRIEP------------LPRCIVLDIEGTTTPITFVADVLFPYARD 289
Query: 312 NVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEE----------- 360
NVG+HLS TYDTAET+DDI LLR+QVEDDL QGV GA+PIP DAGKEE
Sbjct: 290 NVGRHLSATYDTAETKDDINLLRTQVEDDLAQGVDGAIPIPTDDAGKEEVIAALVANVEA 349
Query: 361 ---------------GHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLA 405
GHIWRTG+E+NELEG V+DDVPEALEKWH+LG KVYIYSSGSRLA
Sbjct: 350 MIKADRKITALKQLQGHIWRTGYENNELEGVVYDDVPEALEKWHALGIKVYIYSSGSRLA 409
Query: 406 QRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEAT 465
QRLIFG +NYGDLRKYLSGFFDT VGNK+ET SY+EI+ SLGVDKPS+ILFVTDV+QEA
Sbjct: 410 QRLIFGKTNYGDLRKYLSGFFDTTVGNKKETRSYIEISESLGVDKPSDILFVTDVFQEAF 469
Query: 466 AAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500
AAK AGL+V+ISIRPGN PLPENHGFKTI SFAEI
Sbjct: 470 AAKGAGLDVMISIRPGNAPLPENHGFKTITSFAEI 504
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388513301|gb|AFK44712.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 792 bits (2046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/525 (75%), Positives = 444/525 (84%), Gaps = 30/525 (5%)
Query: 2 ATLAVNGGGGAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDD 61
A + +NG A++ QAYLEG+AVKET+ L++ELCRHFY+LGWVSGTGGSI+IKVHDD
Sbjct: 3 AAIGLNGAKLGTASS--QAYLEGKAVKETKALMAELCRHFYSLGWVSGTGGSISIKVHDD 60
Query: 62 SIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMK 121
SIPKPQQLILMSPS VQKERME EDMYVLS NG+ LS+PSPKPYPHKPPKC+DC LFMK
Sbjct: 61 SIPKPQQLILMSPSAVQKERMEAEDMYVLSDNGSVLSAPSPKPYPHKPPKCTDCDQLFMK 120
Query: 122 AYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTA 181
AYEKRDAGA+IHSHG+ESCLVTMINP SKEFRITHMEMIKGIKGHGYYDELVVPII+NTA
Sbjct: 121 AYEKRDAGAIIHSHGMESCLVTMINPFSKEFRITHMEMIKGIKGHGYYDELVVPIIDNTA 180
Query: 182 YENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLG 241
+E++LT+S KAI+ YPKATAVLVRNHGI+VWGDSWI+AKTQ+ECYHYLFDAAIKLHQ G
Sbjct: 181 HEHQLTESFTKAIEDYPKATAVLVRNHGIFVWGDSWISAKTQSECYHYLFDAAIKLHQKG 240
Query: 242 LDWSTPNHGPTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFV 301
LDWSTPNHGP ++ + GL G N SAKA + D PRCIVLDIEGTTTPISFV
Sbjct: 241 LDWSTPNHGPIQSARRGLSIAGESNISAKARKDNGDIDP--HPRCIVLDIEGTTTPISFV 298
Query: 302 SEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEE- 360
SEVLFPYARDNVG+HLS TYDTAET+ DIKLLRSQVE DL+QG+AGAVPIPP DAGK+E
Sbjct: 299 SEVLFPYARDNVGRHLSATYDTAETKADIKLLRSQVESDLEQGIAGAVPIPPDDAGKDEV 358
Query: 361 -------------------------GHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKV 395
GHIW+TG+ +NELEG VFDDVPEALEKW++LG KV
Sbjct: 359 IAAIVANVDAMIKADRKITALKELQGHIWQTGYANNELEGIVFDDVPEALEKWNALGIKV 418
Query: 396 YIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 455
YIYSSGSRLAQRLIFG +NYGDLRK+LSGFFDT VGNK+ET SYVEI SLGVDKPS+IL
Sbjct: 419 YIYSSGSRLAQRLIFGKTNYGDLRKFLSGFFDTTVGNKKETQSYVEIFQSLGVDKPSDIL 478
Query: 456 FVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500
FVTDVYQEATAAK AGLEV+ISIRPGNGPLP +HGFKT+ SF++I
Sbjct: 479 FVTDVYQEATAAKGAGLEVIISIRPGNGPLPGSHGFKTVKSFSDI 523
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356517132|ref|XP_003527244.1| PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/516 (76%), Positives = 435/516 (84%), Gaps = 29/516 (5%)
Query: 11 GAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLI 70
A + +QAYLEG AVKETR+LISELCRHFY+LGWVSGTGGSITIKVHDDSI KP QLI
Sbjct: 6 ATADSVSSQAYLEGNAVKETRILISELCRHFYSLGWVSGTGGSITIKVHDDSISKPHQLI 65
Query: 71 LMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGA 130
LMSPSGVQKERMEPEDMYVLS G+ LS+PSPKPYPHKPPKCSDC PLFMKAYE DAGA
Sbjct: 66 LMSPSGVQKERMEPEDMYVLSHTGSVLSAPSPKPYPHKPPKCSDCGPLFMKAYEMCDAGA 125
Query: 131 VIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSL 190
VIHSHGIESCLVTM+NP++KEF+ITHMEMIKGIKGHGYYDELV+PIIENTAYE ELT+SL
Sbjct: 126 VIHSHGIESCLVTMLNPLAKEFKITHMEMIKGIKGHGYYDELVIPIIENTAYEYELTESL 185
Query: 191 AKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHG 250
AKAI+AYPK TAVLVRNHGIY+WGDSWI+AKTQAECYHYLFDAAIKLHQLGLDWSTPNHG
Sbjct: 186 AKAIEAYPKTTAVLVRNHGIYIWGDSWISAKTQAECYHYLFDAAIKLHQLGLDWSTPNHG 245
Query: 251 PTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLFPYAR 310
P ++ + L G N S K + FPRCIVLDIEGTTTPISFV+EVLFPYAR
Sbjct: 246 PIKSLR-SLMIAGESNASDKTRKASGEIDP--FPRCIVLDIEGTTTPISFVTEVLFPYAR 302
Query: 311 DNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKE----------- 359
NVG+HLSVTYDT +T+ DIKLL SQV+ DLKQG+AGAVPIP A K
Sbjct: 303 QNVGRHLSVTYDTPDTEADIKLLCSQVQSDLKQGIAGAVPIPSDGACKRAVIDALVTNVE 362
Query: 360 ---------------EGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRL 404
+GH+WRTG+E+NEL+G VFDDVPEALEKWH+LG KVYIYSSGSRL
Sbjct: 363 AMIKADRKITALKELQGHMWRTGYENNELKGIVFDDVPEALEKWHTLGIKVYIYSSGSRL 422
Query: 405 AQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEA 464
AQRLIFG++N+GDLRKYLSGFFDT VGNKRET SYVEI+ SLGVDKPS+ILFVTDVYQEA
Sbjct: 423 AQRLIFGHTNHGDLRKYLSGFFDTTVGNKRETRSYVEISESLGVDKPSDILFVTDVYQEA 482
Query: 465 TAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500
TAAKAAGLEV+IS+RPGN PLPENHGFK I+SF+EI
Sbjct: 483 TAAKAAGLEVIISVRPGNAPLPENHGFKMISSFSEI 518
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449446923|ref|XP_004141220.1| PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/526 (72%), Positives = 427/526 (81%), Gaps = 40/526 (7%)
Query: 1 MATLAVNGGGGAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHD 60
MAT + G G A + +LE + V ET+ L++ELCRHFY LGWVSGTGGSITIKVHD
Sbjct: 1 MATASDVGVNGDKRAKISPDFLESKGVHETKTLLAELCRHFYGLGWVSGTGGSITIKVHD 60
Query: 61 DSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFM 120
D+IPK QL++MSPSGVQKERM PEDMYVLS +G+ +SSP+ KPYPHKPPKCSDC PLFM
Sbjct: 61 DAIPKQNQLVVMSPSGVQKERMVPEDMYVLSPDGSVISSPTVKPYPHKPPKCSDCGPLFM 120
Query: 121 KAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT 180
KAY+ RDAGAVIHSHGIESCL TMINP +KEFRITHMEMIKGIKGHGYYDELV+PIIENT
Sbjct: 121 KAYQMRDAGAVIHSHGIESCLATMINPSAKEFRITHMEMIKGIKGHGYYDELVIPIIENT 180
Query: 181 AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL 240
AYE ELT+SLAKAI+AYPK TAVLVRNHGIYVWGDSWI+AKTQAECYHYLFDAAIKL+QL
Sbjct: 181 AYEYELTESLAKAIEAYPKTTAVLVRNHGIYVWGDSWIHAKTQAECYHYLFDAAIKLYQL 240
Query: 241 GLDWSTPNHGPTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISF 300
GLDWSTPNHGP + FK N S K RCIVLDIEGTTTPISF
Sbjct: 241 GLDWSTPNHGPIQKFKEVAVGGCNDEASLK--------------RCIVLDIEGTTTPISF 286
Query: 301 VSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEE 360
V++VLFPYARDNV KHLS+T+DTAET++DIKLL SQV+DDL++GVAGAVPIPP D+ KEE
Sbjct: 287 VTDVLFPYARDNVHKHLSLTFDTAETKEDIKLLISQVQDDLEKGVAGAVPIPPDDSAKEE 346
Query: 361 --------------------------GHIWRTGFESNELEGEVFDDVPEALEKWHSLGTK 394
GHIW TGFE+NEL+GEVF+DVP ALE+WH+ G K
Sbjct: 347 VIAAIVANVEAMIKADRKIPALKQLQGHIWLTGFENNELKGEVFEDVPRALERWHASGIK 406
Query: 395 VYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 454
VYIYSSGSRLAQRL+FGN+ YGDLRKYLSG+FDTAVGNKRET SYVEI S+GVDKPSEI
Sbjct: 407 VYIYSSGSRLAQRLLFGNTKYGDLRKYLSGYFDTAVGNKRETRSYVEIRESVGVDKPSEI 466
Query: 455 LFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500
LFVTDVYQEA AAKAAGL+V ISIRPGN PLP+NHGFK I SF+EI
Sbjct: 467 LFVTDVYQEAVAAKAAGLDVNISIRPGNAPLPDNHGFKIIQSFSEI 512
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356517134|ref|XP_003527245.1| PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 780 bits (2015), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/516 (76%), Positives = 432/516 (83%), Gaps = 38/516 (7%)
Query: 11 GAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLI 70
A + +QAYLEG AVKETR+LISELCRHFY+LGWVSGTGGSITIKVHDDSI KP QLI
Sbjct: 6 ATADSVSSQAYLEGNAVKETRILISELCRHFYSLGWVSGTGGSITIKVHDDSISKPHQLI 65
Query: 71 LMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGA 130
LMSPSGVQKERMEPEDMYVLS G+ LS+PSPKPYPHKPPKCSDC PLFMKAYE DAGA
Sbjct: 66 LMSPSGVQKERMEPEDMYVLSHTGSVLSAPSPKPYPHKPPKCSDCGPLFMKAYEMCDAGA 125
Query: 131 VIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSL 190
VIHSHGIESCLVTM+NP++KEF+ITHMEMIKGIKGHGYYDELV+PIIENTAYE ELT+SL
Sbjct: 126 VIHSHGIESCLVTMLNPLAKEFKITHMEMIKGIKGHGYYDELVIPIIENTAYEYELTESL 185
Query: 191 AKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHG 250
AKAI+AYPK TAVLVRNHGIY+WGDSWI+AKTQAECYHYLFDAAIKLHQLGLDWSTPNHG
Sbjct: 186 AKAIEAYPKTTAVLVRNHGIYIWGDSWISAKTQAECYHYLFDAAIKLHQLGLDWSTPNHG 245
Query: 251 PTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLFPYAR 310
P ++ + L G N S K RCIVLDIEGTTTPISFV+EVLFPYAR
Sbjct: 246 PIKSLR-SLMIAGESNASDKT-----------RKRCIVLDIEGTTTPISFVTEVLFPYAR 293
Query: 311 DNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKE----------- 359
NVG+HLSVTYDT +T+ DIKLL SQV+ DLKQG+AGAVPIP A K
Sbjct: 294 QNVGRHLSVTYDTPDTEADIKLLCSQVQSDLKQGIAGAVPIPSDGACKRAVIDALVTNVE 353
Query: 360 ---------------EGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRL 404
+GH+WRTG+E+NEL+G VFDDVPEALEKWH+LG KVYIYSSGSRL
Sbjct: 354 AMIKADRKITALKELQGHMWRTGYENNELKGIVFDDVPEALEKWHTLGIKVYIYSSGSRL 413
Query: 405 AQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEA 464
AQRLIFG++N+GDLRKYLSGFFDT VGNKRET SYVEI+ SLGVDKPS+ILFVTDVYQEA
Sbjct: 414 AQRLIFGHTNHGDLRKYLSGFFDTTVGNKRETRSYVEISESLGVDKPSDILFVTDVYQEA 473
Query: 465 TAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500
TAAKAAGLEV+IS+RPGN PLPENHGFK I+SF+EI
Sbjct: 474 TAAKAAGLEVIISVRPGNAPLPENHGFKMISSFSEI 509
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|378405187|sp|E0CSI1.2|MTBC1_VITVI RecName: Full=Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1; Includes: RecName: Full=Methylthioribulose-1-phosphate dehydratase; Short=MTRu-1-P dehydratase; Includes: RecName: Full=Enolase-phosphatase E1; AltName: Full=2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and taxonomy information |
|---|
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/526 (73%), Positives = 440/526 (83%), Gaps = 35/526 (6%)
Query: 1 MATLAVNGGGGAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHD 60
MA A+NG AA +QAYLE V +TR L+S+LCRHFY LGWVSGTGGSITIKVHD
Sbjct: 1 MAAAALNGLKMAAT---SQAYLESMPVNDTRKLLSDLCRHFYGLGWVSGTGGSITIKVHD 57
Query: 61 DSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFM 120
+SIPKPQQLI+MSPSGVQKERM PEDMYVLS +G LSSPSPKPYP+KPPKCSDCAPLFM
Sbjct: 58 ESIPKPQQLIVMSPSGVQKERMVPEDMYVLSPSGCFLSSPSPKPYPNKPPKCSDCAPLFM 117
Query: 121 KAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT 180
KAY R+AGAVIHSHG+ESC+VTMI+P+SKEFRITHMEMIKGI+GHGYYDELVVPIIENT
Sbjct: 118 KAYLMRNAGAVIHSHGMESCIVTMIDPLSKEFRITHMEMIKGIQGHGYYDELVVPIIENT 177
Query: 181 AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL 240
A+E ELTD+LA+AI+AYPK TAVLVRNHGIY+WGDSWI+AKTQAECYHYLFDAAIKL+QL
Sbjct: 178 AHERELTDALAEAIEAYPKTTAVLVRNHGIYIWGDSWIHAKTQAECYHYLFDAAIKLYQL 237
Query: 241 GLDWSTPNHGPTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISF 300
GLDWSTP+HGP + + G N S KA T S++ + RCIVLDIEGTTTPISF
Sbjct: 238 GLDWSTPDHGPIKKY------GGKTNMSVKAGTVNSNHETEPSRRCIVLDIEGTTTPISF 291
Query: 301 VSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEE 360
V++VLFP+AR+NV +HL+ TY+T ETQDDIKLLR+QV+ DL+QG+ GAVPIPP DAGKEE
Sbjct: 292 VTDVLFPFARNNVSRHLAATYETDETQDDIKLLRTQVQSDLEQGIVGAVPIPPDDAGKEE 351
Query: 361 --------------------------GHIWRTGFESNELEGEVFDDVPEALEKWHSLGTK 394
GHIWRTGF++NELEG VF+DVPEAL+KWH+ G K
Sbjct: 352 VIAALVANVEAMIKADRKITALKQLQGHIWRTGFQNNELEGVVFEDVPEALQKWHASGIK 411
Query: 395 VYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 454
VYIYSSGSRLAQRL+FG +NYGDLRKYL GFFDT VGNKRET SYVEIT S+GVDKPSEI
Sbjct: 412 VYIYSSGSRLAQRLLFGYTNYGDLRKYLCGFFDTTVGNKRETKSYVEITESVGVDKPSEI 471
Query: 455 LFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500
LFVTDVYQEA AAKAAGLEV+ISIRPGNGPLP+NHGFKTI SF++I
Sbjct: 472 LFVTDVYQEAVAAKAAGLEVIISIRPGNGPLPDNHGFKTITSFSDI 517
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225461486|ref|XP_002285049.1| PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/526 (73%), Positives = 440/526 (83%), Gaps = 35/526 (6%)
Query: 1 MATLAVNGGGGAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHD 60
MA A+NG AA +QAYLE V +TR L+S+LCRHFY LGWVSGTGGSITIKVHD
Sbjct: 28 MAAAALNGLKMAAT---SQAYLESMPVNDTRKLLSDLCRHFYGLGWVSGTGGSITIKVHD 84
Query: 61 DSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFM 120
+SIPKPQQLI+MSPSGVQKERM PEDMYVLS +G LSSPSPKPYP+KPPKCSDCAPLFM
Sbjct: 85 ESIPKPQQLIVMSPSGVQKERMVPEDMYVLSPSGCFLSSPSPKPYPNKPPKCSDCAPLFM 144
Query: 121 KAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT 180
KAY R+AGAVIHSHG+ESC+VTMI+P+SKEFRITHMEMIKGI+GHGYYDELVVPIIENT
Sbjct: 145 KAYLMRNAGAVIHSHGMESCIVTMIDPLSKEFRITHMEMIKGIQGHGYYDELVVPIIENT 204
Query: 181 AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL 240
A+E ELTD+LA+AI+AYPK TAVLVRNHGIY+WGDSWI+AKTQAECYHYLFDAAIKL+QL
Sbjct: 205 AHERELTDALAEAIEAYPKTTAVLVRNHGIYIWGDSWIHAKTQAECYHYLFDAAIKLYQL 264
Query: 241 GLDWSTPNHGPTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISF 300
GLDWSTP+HGP + + G N S KA T S++ + RCIVLDIEGTTTPISF
Sbjct: 265 GLDWSTPDHGPIKKY------GGKTNMSVKAGTVNSNHETEPSRRCIVLDIEGTTTPISF 318
Query: 301 VSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEE 360
V++VLFP+AR+NV +HL+ TY+T ETQDDIKLLR+QV+ DL+QG+ GAVPIPP DAGKEE
Sbjct: 319 VTDVLFPFARNNVSRHLAATYETDETQDDIKLLRTQVQSDLEQGIVGAVPIPPDDAGKEE 378
Query: 361 --------------------------GHIWRTGFESNELEGEVFDDVPEALEKWHSLGTK 394
GHIWRTGF++NELEG VF+DVPEAL+KWH+ G K
Sbjct: 379 VIAALVANVEAMIKADRKITALKQLQGHIWRTGFQNNELEGVVFEDVPEALQKWHASGIK 438
Query: 395 VYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 454
VYIYSSGSRLAQRL+FG +NYGDLRKYL GFFDT VGNKRET SYVEIT S+GVDKPSEI
Sbjct: 439 VYIYSSGSRLAQRLLFGYTNYGDLRKYLCGFFDTTVGNKRETKSYVEITESVGVDKPSEI 498
Query: 455 LFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500
LFVTDVYQEA AAKAAGLEV+ISIRPGNGPLP+NHGFKTI SF++I
Sbjct: 499 LFVTDVYQEAVAAKAAGLEVIISIRPGNGPLPDNHGFKTITSFSDI 544
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 500 | ||||||
| TAIR|locus:2154664 | 507 | AT5G53850 [Arabidopsis thalian | 0.938 | 0.925 | 0.694 | 2.7e-187 | |
| UNIPROTKB|Q0VCJ2 | 242 | APIP "Methylthioribulose-1-pho | 0.4 | 0.826 | 0.506 | 5.1e-51 | |
| UNIPROTKB|Q96GX9 | 242 | APIP "Methylthioribulose-1-pho | 0.414 | 0.855 | 0.502 | 8.3e-51 | |
| UNIPROTKB|J3KN82 | 259 | APIP "Methylthioribulose-1-pho | 0.4 | 0.772 | 0.506 | 1.1e-50 | |
| UNIPROTKB|F1PT95 | 242 | APIP "Uncharacterized protein" | 0.438 | 0.904 | 0.481 | 1.3e-50 | |
| UNIPROTKB|C1C4M8 | 239 | apip "Methylthioribulose-1-pho | 0.4 | 0.836 | 0.515 | 1.7e-50 | |
| UNIPROTKB|C1BYA3 | 257 | apip "Methylthioribulose-1-pho | 0.416 | 0.809 | 0.502 | 4.6e-50 | |
| UNIPROTKB|F1NNC9 | 242 | APIP "Methylthioribulose-1-pho | 0.4 | 0.826 | 0.511 | 9.5e-50 | |
| RGD|1564562 | 241 | Apip "APAF1 interacting protei | 0.414 | 0.858 | 0.488 | 9.5e-50 | |
| UNIPROTKB|Q5ZLP2 | 242 | APIP "Methylthioribulose-1-pho | 0.4 | 0.826 | 0.506 | 1.2e-49 |
| TAIR|locus:2154664 AT5G53850 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1816 (644.3 bits), Expect = 2.7e-187, P = 2.7e-187
Identities = 353/508 (69%), Positives = 409/508 (80%)
Query: 19 QAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQ 78
QAYLEG+ VKET L++ELCRHFYT GWVSGTGGSIT+KVHD SIPKP+QLI+MSPSGVQ
Sbjct: 13 QAYLEGKEVKETSSLVTELCRHFYTQGWVSGTGGSITMKVHDASIPKPEQLIVMSPSGVQ 72
Query: 79 KERMEPEDMYVLSGNGTTLXXXXXXXXXXXXXXCSDCAPLFMKAYEKRDAGAVIHSHGIE 138
KERM+PEDMY+LS NG+ + C+DCAPLFMKAYE R+AGAVIHSHG+E
Sbjct: 73 KERMQPEDMYILSANGSIISTPSPKPYPNKPPKCTDCAPLFMKAYEMRNAGAVIHSHGME 132
Query: 139 SCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAIDAYP 198
SCLVTM+NP +KEFRITHMEMIKGI+GHGYYDELVVPIIENTAYENELTDSL KAI+AYP
Sbjct: 133 SCLVTMLNPQAKEFRITHMEMIKGIQGHGYYDELVVPIIENTAYENELTDSLTKAIEAYP 192
Query: 199 KATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKLG 258
KATAVLVRNHG+Y+WGDSWI+AKTQAECYHYLFDAAIKLHQLGLD +TP+HGP R
Sbjct: 193 KATAVLVRNHGVYIWGDSWIHAKTQAECYHYLFDAAIKLHQLGLDAATPDHGPIRR---- 248
Query: 259 LGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLS 318
+++ K S Y R IVLDIEGTTTPI+FV++VLFPYAR+NVGKHL+
Sbjct: 249 -----TIHSQIK----DSQYEREWPRRWIVLDIEGTTTPITFVTDVLFPYARENVGKHLN 299
Query: 319 VTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKE------------------- 359
+TY TAETQ+DIKLLR+QVE+DL++GV GAVPIP D GKE
Sbjct: 300 LTYHTAETQEDIKLLRAQVEEDLREGVTGAVPIPHADEGKEKVIAAMVSNVEAMIRADRK 359
Query: 360 -------EGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN 412
+GHIWRTGFE +EL+ VF+DV +ALEKWHS G KVYIYSSGSRLAQ+L+FGN
Sbjct: 360 ITALKELQGHIWRTGFECDELKAIVFEDVADALEKWHSSGIKVYIYSSGSRLAQKLLFGN 419
Query: 413 SNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGL 472
++YGDLRKY+SGFFDT +GNK+E+ SY EI +LGVD P+EI+FVTDVYQEA AAKAAGL
Sbjct: 420 TDYGDLRKYISGFFDTTIGNKKESRSYKEIKETLGVDDPAEIMFVTDVYQEAVAAKAAGL 479
Query: 473 EVVISIRPGNGPLPENHGFKTINSFAEI 500
E +ISIRPGN PLPENHGFKT+ SF++I
Sbjct: 480 EAIISIRPGNAPLPENHGFKTVTSFSQI 507
|
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| UNIPROTKB|Q0VCJ2 APIP "Methylthioribulose-1-phosphate dehydratase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 111/219 (50%), Positives = 141/219 (64%)
Query: 31 RVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVL 90
R LI ELC+ FY LGWV+GTGG I++K H + I ++PSGVQKER++PEDM+V
Sbjct: 25 RYLIPELCKQFYHLGWVTGTGGGISLK-HGNEI-------YIAPSGVQKERIQPEDMFVC 76
Query: 91 SGNGTTLXXXXXXXXXXXXXXCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSK 150
N + S C PLFM AY R+AGAVIH+H + + T++ P K
Sbjct: 77 DINEKDISGPPPSKNLKK----SQCTPLFMNAYTMREAGAVIHTHSKAAVMATLVFP-GK 131
Query: 151 EFRITHMEMIKGIK---GHGYY---DELVVPIIENTAYENELTDSLAKAIDAYPKATAVL 204
EF+ITH EMIKGIK GYY D LVVPIIENT E +L + +A+A++ YP + AVL
Sbjct: 132 EFKITHQEMIKGIKKCTSGGYYRYDDMLVVPIIENTPEEKDLKERMARAVNDYPDSCAVL 191
Query: 205 VRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLD 243
VR HG+YVWG++W AKT ECY YLFD A+ + Q GLD
Sbjct: 192 VRRHGVYVWGETWEKAKTMCECYDYLFDVAVSMKQAGLD 230
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| UNIPROTKB|Q96GX9 APIP "Methylthioribulose-1-phosphate dehydratase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 114/227 (50%), Positives = 143/227 (62%)
Query: 24 GRAVKE-TRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERM 82
G KE R LI ELC+ FY LGWV+GTGG I++K H D I ++PSGVQKER+
Sbjct: 17 GAQDKEHPRYLIPELCKQFYHLGWVTGTGGGISLK-HGDEI-------YIAPSGVQKERI 68
Query: 83 EPEDMYVLSGNGTTLXXXXXXXXXXXXXXCSDCAPLFMKAYEKRDAGAVIHSHGIESCLV 142
+PEDM+V N + S C PLFM AY R AGAVIH+H + +
Sbjct: 69 QPEDMFVCDINEKDISGPSPSKKLKK----SQCTPLFMNAYTMRGAGAVIHTHSKAAVMA 124
Query: 143 TMINPMSKEFRITHMEMIKGIK---GHGYY---DELVVPIIENTAYENELTDSLAKAIDA 196
T++ P +EF+ITH EMIKGIK GYY D LVVPIIENT E +L D +A A++
Sbjct: 125 TLLFP-GREFKITHQEMIKGIKKCTSGGYYRYDDMLVVPIIENTPEEKDLKDRMAHAMNE 183
Query: 197 YPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLD 243
YP + AVLVR HG+YVWG++W AKT ECY YLFD A+ + ++GLD
Sbjct: 184 YPDSCAVLVRRHGVYVWGETWEKAKTMCECYDYLFDIAVSMKKVGLD 230
|
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| UNIPROTKB|J3KN82 APIP "Methylthioribulose-1-phosphate dehydratase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 111/219 (50%), Positives = 140/219 (63%)
Query: 31 RVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVL 90
R LI ELC+ FY LGWV+GTGG I++K H D I ++PSGVQKER++PEDM+V
Sbjct: 42 RYLIPELCKQFYHLGWVTGTGGGISLK-HGDEI-------YIAPSGVQKERIQPEDMFVC 93
Query: 91 SGNGTTLXXXXXXXXXXXXXXCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSK 150
N + S C PLFM AY R AGAVIH+H + + T++ P +
Sbjct: 94 DINEKDISGPSPSKKLKK----SQCTPLFMNAYTMRGAGAVIHTHSKAAVMATLLFP-GR 148
Query: 151 EFRITHMEMIKGIK---GHGYY---DELVVPIIENTAYENELTDSLAKAIDAYPKATAVL 204
EF+ITH EMIKGIK GYY D LVVPIIENT E +L D +A A++ YP + AVL
Sbjct: 149 EFKITHQEMIKGIKKCTSGGYYRYDDMLVVPIIENTPEEKDLKDRMAHAMNEYPDSCAVL 208
Query: 205 VRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLD 243
VR HG+YVWG++W AKT ECY YLFD A+ + ++GLD
Sbjct: 209 VRRHGVYVWGETWEKAKTMCECYDYLFDIAVSMKKVGLD 247
|
|
| UNIPROTKB|F1PT95 APIP "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 120/249 (48%), Positives = 153/249 (61%)
Query: 24 GRAVKE-TRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERM 82
G KE R LI ELC+ FY LGWV+GTGG I++K H D I ++PSGVQKER+
Sbjct: 17 GAQDKEHPRYLIPELCKQFYHLGWVTGTGGGISLK-HGDEI-------YIAPSGVQKERI 68
Query: 83 EPEDMYVLSGNGTTLXXXXXXXXXXXXXXCSDCAPLFMKAYEKRDAGAVIHSHGIESCLV 142
+PEDM+V N + S C PLFM AY R AGAVIH+H + +
Sbjct: 69 QPEDMFVCDINEQDISGPPPSKNLKK----SQCTPLFMNAYTMRGAGAVIHTHSKAAVMA 124
Query: 143 TMINPMSKEFRITHMEMIKGIK---GHGYY---DELVVPIIENTAYENELTDSLAKAIDA 196
T++ P +EF+ITH EMIKGI+ GYY D LVVPIIENT E +L + +A+AI+
Sbjct: 125 TLLFP-GREFKITHQEMIKGIRKCTSGGYYRYDDMLVVPIIENTPEEKDLKERMARAINE 183
Query: 197 YPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFK 256
YP + AVLVR HG+YVWG++W AKT ECY YLFD A+ + ++GLD PT+
Sbjct: 184 YPDSCAVLVRRHGVYVWGETWEKAKTMCECYDYLFDIAVSMKKVGLD-------PTQ--- 233
Query: 257 LGLGSNGNV 265
L +G NG V
Sbjct: 234 LPVGENGIV 242
|
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| UNIPROTKB|C1C4M8 apip "Methylthioribulose-1-phosphate dehydratase" [Rana catesbeiana (taxid:8400)] | Back alignment and assigned GO terms |
|---|
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 113/219 (51%), Positives = 142/219 (64%)
Query: 31 RVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVL 90
R LI ELCR FY LGWV+GTGG I++K H + I ++PSGVQKER++P+D++V
Sbjct: 22 RHLIPELCRQFYNLGWVTGTGGGISMK-HGEEI-------YIAPSGVQKERIQPDDLFVC 73
Query: 91 SGNGTTLXXXXXXXXXXXXXXCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSK 150
+ + S C PLFM AY R AGAVIH+H + L T++ P K
Sbjct: 74 DIDERDISCPPPYKNLKK----SQCTPLFMNAYTLRGAGAVIHTHSKSAVLATLLFP-GK 128
Query: 151 EFRITHMEMIKGIK----GHGY-YDEL-VVPIIENTAYENELTDSLAKAIDAYPKATAVL 204
EFRITH EMIKGIK G Y YD+L VVPI+ENT E +L D +A+A+ YP + AVL
Sbjct: 129 EFRITHQEMIKGIKKGSSGDYYRYDDLLVVPIVENTPEEKDLKDRMARAMTEYPDSCAVL 188
Query: 205 VRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLD 243
VR HG+YVWGD+W AKT ECY YLFD A+++ QLGLD
Sbjct: 189 VRRHGVYVWGDTWEKAKTMCECYDYLFDIAVQMKQLGLD 227
|
|
| UNIPROTKB|C1BYA3 apip "Methylthioribulose-1-phosphate dehydratase" [Esox lucius (taxid:8010)] | Back alignment and assigned GO terms |
|---|
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 114/227 (50%), Positives = 142/227 (62%)
Query: 23 EGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERM 82
E + + RVLI ELCR FY LGWV+GTGG I+++ H D I ++PSGVQKER+
Sbjct: 27 ESQDKEHPRVLIPELCRLFYKLGWVTGTGGGISLR-HGDQI-------YIAPSGVQKERL 78
Query: 83 EPEDMYVLSGNGTTLXXXXXXXXXXXXXXCSDCAPLFMKAYEKRDAGAVIHSHGIESCLV 142
+PEDM+V + C PLFM AY R A AVIH+H + +
Sbjct: 79 QPEDMFVCDVEERDICVPPAWKNLKK----GQCTPLFMNAYTMRAAQAVIHTHSKAAVMA 134
Query: 143 TMINPMSKEFRITHMEMIKGIK----GHGY-YDE-LVVPIIENTAYENELTDSLAKAIDA 196
T+ P KEFRITH EMIKGI+ G Y YDE LVVPIIENT E +L + +A A++
Sbjct: 135 TLFYP-GKEFRITHQEMIKGIRKCTSGTNYRYDETLVVPIIENTPEEQDLKERMALAMEQ 193
Query: 197 YPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLD 243
YP++ AVLVR HG+YVWG+SW AKT ECY YLFD A+K+ Q GLD
Sbjct: 194 YPESCAVLVRRHGVYVWGESWEKAKTMCECYDYLFDIAVKMKQCGLD 240
|
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| UNIPROTKB|F1NNC9 APIP "Methylthioribulose-1-phosphate dehydratase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 112/219 (51%), Positives = 140/219 (63%)
Query: 31 RVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVL 90
R LI ELCR FY LGWV+GTGG I++K H + I ++PSGVQKER++PEDM+V
Sbjct: 25 RNLIPELCRLFYGLGWVTGTGGGISLK-HGNEI-------YIAPSGVQKERIQPEDMFVC 76
Query: 91 SGNGTTLXXXXXXXXXXXXXXCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSK 150
N + S C PLFM AY R AGAVIH+H + + T++ P S
Sbjct: 77 DMNEQDISGPPAHKKLKK----SQCTPLFMNAYTMRGAGAVIHTHSKAAVMATLLYPGS- 131
Query: 151 EFRITHMEMIKGIK---GHGYY---DELVVPIIENTAYENELTDSLAKAIDAYPKATAVL 204
EF ITH EMIKGI+ GYY D LVVPIIENT E +L + +AKA++ YP + AVL
Sbjct: 132 EFTITHQEMIKGIQKCSSGGYYRYDDTLVVPIIENTPEEKDLKERMAKAMEEYPDSCAVL 191
Query: 205 VRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLD 243
VR HG+YVWG++W AKT ECY YLFD A+++ Q GLD
Sbjct: 192 VRRHGVYVWGETWEKAKTMCECYDYLFDIAVQMKQHGLD 230
|
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| RGD|1564562 Apip "APAF1 interacting protein" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 111/227 (48%), Positives = 144/227 (63%)
Query: 24 GRAVKE-TRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERM 82
G KE R LI ELC+ FY LGWV+GTGG I++K H + I ++PSGVQKER+
Sbjct: 16 GAQDKEHPRFLIPELCKQFYHLGWVTGTGGGISLK-HGNEI-------YIAPSGVQKERI 67
Query: 83 EPEDMYVLSGNGTTLXXXXXXXXXXXXXXCSDCAPLFMKAYEKRDAGAVIHSHGIESCLV 142
+PEDM+V N + S C PLFM AY R AGAVIH+H + +
Sbjct: 68 QPEDMFVCDINEQDISGPPASKNLKK----SQCTPLFMNAYTMRGAGAVIHTHSKAAVMA 123
Query: 143 TMINPMSKEFRITHMEMIKGIK---GHGYY---DELVVPIIENTAYENELTDSLAKAIDA 196
T++ P +EF+ITH EMIKGI+ GYY D LVVPIIENT E +L + +A+A++
Sbjct: 124 TLLFP-GQEFKITHQEMIKGIRKCTSGGYYRYDDILVVPIIENTPEEKDLKERMARAMNE 182
Query: 197 YPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLD 243
YP + AVLVR HG+YVWG++W AKT ECY YLFD A+ + ++GLD
Sbjct: 183 YPDSCAVLVRRHGVYVWGETWEKAKTMCECYDYLFDIAVSMKKMGLD 229
|
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| UNIPROTKB|Q5ZLP2 APIP "Methylthioribulose-1-phosphate dehydratase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 111/219 (50%), Positives = 139/219 (63%)
Query: 31 RVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVL 90
R LI ELCR FY LGWV+GTGG I++K H + I ++PSGVQKER++PEDM+V
Sbjct: 25 RNLIPELCRLFYGLGWVTGTGGGISLK-HGNEI-------YIAPSGVQKERIQPEDMFVC 76
Query: 91 SGNGTTLXXXXXXXXXXXXXXCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSK 150
N + S C PLFM AY R AGAVIH+H + + T++ P
Sbjct: 77 DMNEQDISGPPAHKKLKK----SQCTPLFMNAYTMRGAGAVIHTHSKAAVMATLLYP-GN 131
Query: 151 EFRITHMEMIKGIK---GHGYY---DELVVPIIENTAYENELTDSLAKAIDAYPKATAVL 204
EF ITH EMIKGI+ GYY D LVVPIIENT E +L + +AKA++ YP + AVL
Sbjct: 132 EFTITHQEMIKGIQKCSSGGYYRYDDTLVVPIIENTPEEKDLKERMAKAMEEYPDSCAVL 191
Query: 205 VRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLD 243
VR HG+YVWG++W AKT ECY YLFD A+++ Q GLD
Sbjct: 192 VRRHGVYVWGETWEKAKTMCECYDYLFDIAVQMKQHGLD 230
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9FN41 | MTBC_ARATH | 3, ., 1, ., 3, ., 7, 7 | 0.7185 | 0.938 | 0.9250 | yes | no |
| B4G0F3 | MTBC_MAIZE | 3, ., 1, ., 3, ., 7, 7 | 0.6434 | 0.964 | 0.9323 | N/A | no |
| B9N1F9 | MTBC_POPTR | 3, ., 1, ., 3, ., 7, 7 | 0.7708 | 0.954 | 0.9464 | yes | no |
| E0CSI1 | MTBC1_VITVI | 3, ., 1, ., 3, ., 7, 7 | 0.7395 | 0.982 | 0.9497 | yes | no |
| A9RBS1 | MTBC_PHYPA | 3, ., 1, ., 3, ., 7, 7 | 0.61 | 0.918 | 0.9089 | N/A | no |
| B9SQI7 | MTBC_RICCO | 3, ., 1, ., 3, ., 7, 7 | 0.7769 | 0.98 | 0.9297 | N/A | no |
| C6JS30 | MTBC_SORBI | 3, ., 1, ., 3, ., 7, 7 | 0.6492 | 0.964 | 0.9323 | N/A | no |
| B8BKI7 | MTBC_ORYSI | 3, ., 1, ., 3, ., 7, 7 | 0.6731 | 0.956 | 0.9227 | N/A | no |
| Q2R483 | MTBC_ORYSJ | 3, ., 1, ., 3, ., 7, 7 | 0.6771 | 0.956 | 0.9227 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.3 | 0.691 |
| 4th Layer | 4.2.1.109 | LOW CONFIDENCE prediction! |
| 3rd Layer | 4.2.1 | LOW CONFIDENCE prediction! |
| 3rd Layer | 3.1.3.77 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | estExt_fgenesh4_pg.C_1070035 | hypothetical protein (504 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | estExt_Genewise1_v1.C_LG_VIII2401 | hypothetical protein (190 aa) | • | • | • | • | 0.973 | ||||
 | estExt_Genewise1_v1.C_LG_VIII0915 | hypothetical protein (200 aa) | • | • | • | • | 0.973 | ||||
 | estExt_fgenesh4_pm.C_LG_VI0635 | hypothetical protein (384 aa) | • | • | • | • | • | 0.812 | |||
 | eugene3.79220002 | Predicted protein (212 aa) | • | • | 0.426 | ||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 500 | |||
| TIGR03328 | 193 | TIGR03328, salvage_mtnB, methylthioribulose-1-phos | 1e-82 | |
| TIGR01691 | 220 | TIGR01691, enolase-ppase, 2,3-diketo-5-methylthio- | 4e-63 | |
| COG4229 | 229 | COG4229, COG4229, Predicted enolase-phosphatase [E | 3e-61 | |
| smart01007 | 185 | smart01007, Aldolase_II, Class II Aldolase and Add | 7e-38 | |
| pfam00596 | 181 | pfam00596, Aldolase_II, Class II Aldolase and Addu | 5e-35 | |
| COG0235 | 219 | COG0235, AraD, Ribulose-5-phosphate 4-epimerase an | 4e-32 | |
| PRK06754 | 208 | PRK06754, mtnB, methylthioribulose-1-phosphate deh | 4e-29 | |
| cd00398 | 209 | cd00398, Aldolase_II, Class II Aldolase and Adduci | 6e-21 | |
| pfam13419 | 176 | pfam13419, HAD_2, Haloacid dehalogenase-like hydro | 3e-20 | |
| TIGR01549 | 162 | TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase sup | 9e-17 | |
| PRK09220 | 204 | PRK09220, PRK09220, methylthioribulose-1-phosphate | 9e-16 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 1e-08 | |
| PRK06833 | 214 | PRK06833, PRK06833, L-fuculose phosphate aldolase; | 6e-08 | |
| COG0546 | 220 | COG0546, Gph, Predicted phosphatases [General func | 2e-06 | |
| PRK08130 | 213 | PRK08130, PRK08130, putative aldolase; Validated | 2e-06 | |
| PRK06755 | 209 | PRK06755, PRK06755, hypothetical protein; Validate | 7e-06 | |
| TIGR01086 | 214 | TIGR01086, fucA, L-fuculose phosphate aldolase | 3e-05 | |
| PRK08087 | 215 | PRK08087, PRK08087, L-fuculose phosphate aldolase; | 4e-05 | |
| PRK06557 | 221 | PRK06557, PRK06557, L-ribulose-5-phosphate 4-epime | 4e-04 | |
| TIGR01428 | 198 | TIGR01428, HAD_type_II, 2-haloalkanoic acid dehalo | 0.003 |
| >gnl|CDD|234168 TIGR03328, salvage_mtnB, methylthioribulose-1-phosphate dehydratase | Back alignment and domain information |
|---|
Score = 253 bits (649), Expect = 1e-82
Identities = 71/209 (33%), Positives = 107/209 (51%), Gaps = 18/209 (8%)
Query: 34 ISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN 93
+ E R Y GWV GTGG++ S + IL++PSGV K R+ PED V+
Sbjct: 1 LIEAGRDLYKRGWVPGTGGNL-------SARLDEDEILITPSGVDKGRLTPEDFLVVDLQ 53
Query: 94 GTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEF 152
G +S P S L + Y AGAV+H+H +E+ +++ + P + F
Sbjct: 54 GKPVSGG-------LKP--SAETLLHTQLYRLTPGAGAVLHTHSVEATVLSRLYPSNGAF 104
Query: 153 RITHMEMIKGIKG-HGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIY 211
+ EM+K + G + D+L +PI ENT L DS+A ++AYP VL+R HG+Y
Sbjct: 105 ELEGYEMLKALPGITTHEDKLTIPIFENTQDIARLADSVAPYLEAYPDVPGVLIRGHGLY 164
Query: 212 VWGDSWINAKTQAECYHYLFDAAIKLHQL 240
WG W AK E +LF+ +++ +L
Sbjct: 165 AWGRDWEEAKRHLEALEFLFECELEMLKL 193
|
Members of this family are the methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway. This pathway allows methylthioadenosine, left over from polyamine biosynthesis, to be recycled to methionine [Amino acid biosynthesis, Aspartate family]. Length = 193 |
| >gnl|CDD|233533 TIGR01691, enolase-ppase, 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Score = 204 bits (521), Expect = 4e-63
Identities = 89/225 (39%), Positives = 125/225 (55%), Gaps = 24/225 (10%)
Query: 285 RCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYD------------TAETQDDIKL 332
+ ++LDIEGTT ISFV +VLFPYA + ++ Y+ T E ++
Sbjct: 2 KNVLLDIEGTTGSISFVHDVLFPYAASRLESFVNDNYESTIVENLRELGKTPEELILLRK 61
Query: 333 LRSQVEDDLKQGVAGAVPIPPGDAGKEEGHIWRTGFESNELEGEVFDDVPEALEKWHSLG 392
L ++++ D K + +G IWR G+ES EL ++ DVP ALE W LG
Sbjct: 62 LHAEMDKDRKATPLKTL----------QGLIWRQGYESGELTSHLYPDVPPALEAWLQLG 111
Query: 393 TKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 452
++ +YSSGS AQ+L+FG+S+ G+L Y SG+FDT VG K E SYV+I LG P
Sbjct: 112 LRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSP-PR 170
Query: 453 EILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSF 497
EILF++D+ E AA+ AGL +RPGN P+ + F F
Sbjct: 171 EILFLSDIINELDAARKAGLHTGQLVRPGNDPVVDP-SFPVYPQF 214
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities [Central intermediary metabolism, Sulfur metabolism]. Length = 220 |
| >gnl|CDD|226682 COG4229, COG4229, Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 200 bits (509), Expect = 3e-61
Identities = 90/224 (40%), Positives = 131/224 (58%), Gaps = 12/224 (5%)
Query: 284 PRCIVLDIEGTTTPISFVSEVLFPYAR----DNVGKH-----LSVTYDTAETQDDIKLLR 334
+ I+LDIEGT +PISFV +VLFPYA D V ++ + D ++ I
Sbjct: 4 VKAILLDIEGTVSPISFVKDVLFPYAARKLPDFVRENTEDSEVKKIVDEVLSEFGIANSE 63
Query: 335 SQVEDDLKQGVAGAVPIPPGDAGKEEGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTK 394
+ L + +A P A +G IW G+ES EL+ ++ D +A+++W +LG +
Sbjct: 64 EALVALLLEWIAEDSKDTPLKA--LQGMIWAHGYESGELKAHLYPDAVQAIKRWKALGMR 121
Query: 395 VYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 454
VYIYSSGS AQ+L FG+S+ GDL SG+FDT +G KRE+ SY +I +G+ P+EI
Sbjct: 122 VYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDTTIGKKRESQSYAKIAGDIGL-PPAEI 180
Query: 455 LFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFA 498
LF++D +E AA GL +++RPGN P+P+ GF SF
Sbjct: 181 LFLSDNPEELKAAAGVGLATGLAVRPGNAPVPDGQGFLVYKSFE 224
|
Length = 229 |
| >gnl|CDD|214970 smart01007, Aldolase_II, Class II Aldolase and Adducin N-terminal domain | Back alignment and domain information |
|---|
Score = 136 bits (345), Expect = 7e-38
Identities = 57/204 (27%), Positives = 87/204 (42%), Gaps = 21/204 (10%)
Query: 34 ISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN 93
++ CR G V GTGG+I+ +V ++ L L++PSGV + D+ V+ +
Sbjct: 1 LAAACRLLARRGLVEGTGGNISARVGEE------DLFLITPSGVDFGELTASDLVVVDLD 54
Query: 94 GTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEF 152
G + PK S PL + Y R D GAV+H+H + + + K
Sbjct: 55 GNVV-------EGGGGPKPSSETPLHLAIYRARPDVGAVVHTHSPYATALAA---LGKPL 104
Query: 153 RITHMEMIKGI-KGHGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIY 211
+ E G Y P E EL ++LA+A+ P AVL+RNHG+
Sbjct: 105 PLLPTEQAAAFLGGEIPYAPYAGPGTELAEEGAELAEALAEALPDRP---AVLLRNHGLL 161
Query: 212 VWGDSWINAKTQAECYHYLFDAAI 235
VWG + A AE + +
Sbjct: 162 VWGKTLEEAFDLAEELEEAAEIQL 185
|
This family includes class II aldolases and adducins which have not been ascribed any enzymatic function. Length = 185 |
| >gnl|CDD|216015 pfam00596, Aldolase_II, Class II Aldolase and Adducin N-terminal domain | Back alignment and domain information |
|---|
Score = 128 bits (325), Expect = 5e-35
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 27/204 (13%)
Query: 34 ISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN 93
++ CR G V GTGG+I+ + D L++PSGV + ED+ V+ +
Sbjct: 3 LAAACRLLARRGLVEGTGGNISARDPD--------HFLITPSGVDFGELTAEDLVVVDLD 54
Query: 94 GTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEF 152
G + P S PL Y R D GAV+H+H + ++ +
Sbjct: 55 GNVVEGGEGGGKP------SSETPLHAAIYRARPDVGAVVHTHSPYATALSALKEGLPPI 108
Query: 153 RITHMEMIKGIKGHGYYDELVVPIIENTAY-ENELTDSLAKAIDAYPKATAVLVRNHGIY 211
G + +P++ EL + LA+A+ AVL+RNHG+
Sbjct: 109 TQEAAAFYLGGE---------IPVVPYYRPGTEELGERLAEALGG--DRKAVLLRNHGLL 157
Query: 212 VWGDSWINAKTQAECYHYLFDAAI 235
VWG + A +AE + +
Sbjct: 158 VWGKTLEEAFDRAEVLERAAEIQL 181
|
This family includes class II aldolases and adducins which have not been ascribed any enzymatic function. Length = 181 |
| >gnl|CDD|223313 COG0235, AraD, Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 122 bits (307), Expect = 4e-32
Identities = 51/216 (23%), Positives = 87/216 (40%), Gaps = 26/216 (12%)
Query: 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDM 87
++ R +++ R G V GT G+I++++ + L L++PSGV + +D+
Sbjct: 6 EKLRQELAKAARLLARRGLVEGTAGNISVRLPEG------GLFLITPSGVPFGELTADDL 59
Query: 88 YVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMIN 146
V+ +G + KP + P+ + Y R DAGAV+H+H + ++ +
Sbjct: 60 VVVDLDGEVVEGG------KKPSSET---PIHLAIYRARPDAGAVVHTHSPYATALSTLG 110
Query: 147 PMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVR 206
+ E +K G P A LA+A+ L+R
Sbjct: 111 ---EPLPPLGTEHLKYFGGGIPCAPYAGPGSVELAEALAEAADLAEAV-------LKLLR 160
Query: 207 NHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGL 242
NHG+ WG + A AE L +K LG
Sbjct: 161 NHGVVAWGKTLAEAVHLAEVLEELAKLQLKALSLGK 196
|
Length = 219 |
| >gnl|CDD|180679 PRK06754, mtnB, methylthioribulose-1-phosphate dehydratase; Reviewed | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 4e-29
Identities = 62/211 (29%), Positives = 97/211 (45%), Gaps = 21/211 (9%)
Query: 34 ISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN 93
++E+ + W T G+++IKV DD + L++ SG K + PED ++ +
Sbjct: 11 LAEIKKELAARDWFPATSGNLSIKVSDDPL-----TFLVTASGKDKRKTTPEDFLLVDHD 65
Query: 94 GTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFR 153
G + KP S L Y +AG V+H H +++ +++ +
Sbjct: 66 GKPVEETELKP--------SAETLLHTHIYNNTNAGCVLHVHTVDNNVISELYGDDGAVT 117
Query: 154 ITHMEMIKGIKGHGYYDE---LVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGI 210
E+IK + G ++E + +PIIEN A L + AK I + AVL+RNHGI
Sbjct: 118 FQGQEIIKAL---GIWEENAEIHIPIIENHADIPTLAEEFAKHIQ--GDSGAVLIRNHGI 172
Query: 211 YVWGDSWINAKTQAECYHYLFDAAIKLHQLG 241
VWG AK E Y +LF IKL +
Sbjct: 173 TVWGRDAFEAKKHLEAYEFLFSYHIKLLSIQ 203
|
Length = 208 |
| >gnl|CDD|238232 cd00398, Aldolase_II, Class II Aldolase and Adducin head (N-terminal) domain | Back alignment and domain information |
|---|
Score = 90.5 bits (225), Expect = 6e-21
Identities = 52/219 (23%), Positives = 83/219 (37%), Gaps = 32/219 (14%)
Query: 34 ISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN 93
I C GWV+GTGG+++ + D L++PSGV E M D+ V+
Sbjct: 7 IIAACLLLDLYGWVTGTGGNVSARDRDR------GYFLITPSGVDYEEMTASDLVVVDAQ 60
Query: 94 GTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEF 152
G + P S PL + Y R D G ++H+H S T ++ + +
Sbjct: 61 GKVVEGKKP----------SSETPLHLALYRARPDIGCIVHTH---STHATAVSQLKEG- 106
Query: 153 RITHMEMIKGIKGHGYYDELVVPIIENTA---YENELTDSLAKAIDAYPKATAVLVRNHG 209
+ G Y +P E+E+ A P + AVL+RNHG
Sbjct: 107 -----LIPAGHTACAVYFTGDIPCTPYMTPETGEDEIGTQRALGF---PNSKAVLLRNHG 158
Query: 210 IYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPN 248
++ WG + A A + +K +G +
Sbjct: 159 LFAWGPTLDEAFHLAVVLEVAAEIQLKALSMGGQLPPIS 197
|
Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). Class II enzymes are further divided into two sub-classes A and B. This family includes class II A aldolases and adducins which has not been ascribed any enzymatic function. Members of this class are primarily bacterial and eukaryotic in origin and include L-fuculose-1-phosphate, L-rhamnulose-1-phosphate aldolases and L-ribulose-5-phosphate 4-epimerases. They all share the ability to promote carbon-carbon bond cleavage and stabilize enolate intermediates using divalent cations. Length = 209 |
| >gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 87.8 bits (218), Expect = 3e-20
Identities = 49/190 (25%), Positives = 76/190 (40%), Gaps = 17/190 (8%)
Query: 287 IVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVA 346
I+ D++GT V +F RD + L + E LR + +A
Sbjct: 1 IIFDLDGTLIDFDPV---IFEALRDLAAERLGLDISAEE-------LREAGGLPFDEALA 50
Query: 347 GAVPIPPGDAGKEEGHIWRTGFESNELE-GEVFDDVPEALEKWHSLGTKVYIYSSGSRLA 405
+ + + I E N E F DV E L + + G K+ I S+GSR A
Sbjct: 51 DLLR----EHPIDPDEILEALLEYNLESRLEPFPDVVELLRRLKAKGVKLVILSNGSREA 106
Query: 406 QRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEAT 465
+ DL + D K + +Y + LG+ P EILF+ D ++
Sbjct: 107 VERLLEKLGLLDLFDAVFTSDDVGAR-KPDPEAYERVLERLGLP-PEEILFIDDSPEDLE 164
Query: 466 AAKAAGLEVV 475
AA+AAG++ V
Sbjct: 165 AARAAGIKTV 174
|
Length = 176 |
| >gnl|CDD|233463 TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Score = 77.4 bits (191), Expect = 9e-17
Identities = 46/186 (24%), Positives = 70/186 (37%), Gaps = 26/186 (13%)
Query: 287 IVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVA 346
I+ DI+GT I F F + +K LR E+ L +
Sbjct: 2 ILFDIDGTLVDIKFAIRRAFAQTFEEF-------GLNPAAFKRLKALRGLAEELLWR--- 51
Query: 347 GAVPIPPGDAGKEEGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQ 406
I + +GHI G+++ E + L + G K+ I S+GS AQ
Sbjct: 52 ----IATEALEELQGHI---GYDAEEAY---IPGAADLLPRLKEAGIKLGIISNGSLRAQ 101
Query: 407 RLIFGNSNYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEAT 465
+L+ L Y +G+K E ++ SLGV P E+L V D +
Sbjct: 102 KLLLR---KHGLGDYFELILGSDEIGSKPEPEIFLAALESLGV--PPEVLHVGDNLSDIK 156
Query: 466 AAKAAG 471
A+ AG
Sbjct: 157 GARNAG 162
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single representation is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)(D/E), (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 1 (this model) is found in the enzymes phosphoglycolate phosphatase (TIGR01449) and enolase-phosphatase. These three variant models (see also TIGR01493 and TIGR01509) were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 162 |
| >gnl|CDD|236415 PRK09220, PRK09220, methylthioribulose-1-phosphate dehydratase; Provisional | Back alignment and domain information |
|---|
Score = 75.4 bits (186), Expect = 9e-16
Identities = 50/216 (23%), Positives = 89/216 (41%), Gaps = 31/216 (14%)
Query: 33 LISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPED-MYV-L 90
+ R GWV T G++++++ + ++ SG K + ED + V +
Sbjct: 9 QLIAAGRWIGARGWVPATSGNMSVRLDEQHC-------AITVSGKDKGSLTAEDFLQVDI 61
Query: 91 SGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMS 149
+GN P KP S L + Y + GAV+H+H + + +++ + S
Sbjct: 62 AGN--------AVPSGRKP---SAETLLHTQLYRLFPEIGAVLHTHSVNATVLSRVEK-S 109
Query: 150 KEFRITHMEMIKGIKG-HGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAV----L 204
+ E+ K G + +VVPI +N + LA + Y A + L
Sbjct: 110 DALVLEGYELQKAFAGQTTHETAVVVPIFDND----QDIARLAARVAPYLDAQPLRYGYL 165
Query: 205 VRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL 240
+R HG+Y WG A+ E +LF+ ++ L
Sbjct: 166 IRGHGLYCWGRDMAEARRHLEGLEFLFECELERRLL 201
|
Length = 204 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 54.6 bits (131), Expect = 1e-08
Identities = 38/196 (19%), Positives = 65/196 (33%), Gaps = 19/196 (9%)
Query: 285 RCIVLDIEGT---TTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDL 341
+ +V D++GT P+ +E L A + + + +L+R + L
Sbjct: 2 KAVVFDLDGTLTDGEPVVPEAEALLEAAAALGVAIVIAAGENLTKEGREELVRRLLLRAL 61
Query: 342 KQGVAGAVPIPPGDAGKEEGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSG 401
+ G + L ++ EAL++ G K+ I +
Sbjct: 62 AGEELLEELLRAGATVVAVLDLVV--LGLIALTDPLYPGAREALKELKEAGIKLAILTGD 119
Query: 402 SR------LAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 455
+R +F DL + K + + LGV P E+L
Sbjct: 120 NRLTANAIARLLGLFDALVSADL-------YGLVGVGKPDPKIFELALEELGVK-PEEVL 171
Query: 456 FVTDVYQEATAAKAAG 471
V D + AAKAAG
Sbjct: 172 MVGDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|180717 PRK06833, PRK06833, L-fuculose phosphate aldolase; Provisional | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 6e-08
Identities = 49/203 (24%), Positives = 81/203 (39%), Gaps = 37/203 (18%)
Query: 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDM 87
++ R I + + G GTGG+I+I + Q L+ ++PSG+ ++PED+
Sbjct: 4 QKEREEIVAYGKKLISSGLTKGTGGNISIFNRE------QGLMAITPSGIDYFEIKPEDI 57
Query: 88 YVLSGNGTTLSS---PSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVT 143
++ +G + PS + H Y R D A++H+H S T
Sbjct: 58 VIMDLDGKVVEGERKPSSELDMHL------------IFYRNREDINAIVHTH---SPYAT 102
Query: 144 MINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAK-AIDAYPKATA 202
+ + E H Y + P + Y T LA+ A +A A
Sbjct: 103 TLACLGWELPAVH-----------YLIAVAGPNVRCAEYATFGTKELAENAFEAMEDRRA 151
Query: 203 VLVRNHGIYVWGDSWINAKTQAE 225
VL+ NHG+ ++ NA AE
Sbjct: 152 VLLANHGLLAGANNLKNAFNIAE 174
|
Length = 214 |
| >gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 2e-06
Identities = 45/185 (24%), Positives = 70/185 (37%), Gaps = 23/185 (12%)
Query: 329 DIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEGHIWRTGFESNELE---GEVFDDVPEAL 385
D + +R + L + + + +A E R F + E +F V E L
Sbjct: 39 DEEEIRQLIGLGLDELIERLLGEADEEAAAELVERLREEFLTAYAELLESRLFPGVKELL 98
Query: 386 EKWHSLGTKVYIYSS-GSRLAQRLIFGNSNYGDLRKYLSGFFDTAVG-----NKRETPSY 439
S G K+ I ++ R L+ G L+ +FD VG + P
Sbjct: 99 AALKSAGYKLGIVTNKPERELDILL---KALG-----LADYFDVIVGGDDVPPPKPDPEP 150
Query: 440 V-EITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGP--LPENHGFK-TIN 495
+ + LG+D P E L V D + AAKAAG+ + + G G I+
Sbjct: 151 LLLLLEKLGLD-PEEALMVGDSLNDILAAKAAGV-PAVGVTWGYNSREELAQAGADVVID 208
Query: 496 SFAEI 500
S AE+
Sbjct: 209 SLAEL 213
|
Length = 220 |
| >gnl|CDD|181241 PRK08130, PRK08130, putative aldolase; Validated | Back alignment and domain information |
|---|
Score = 48.3 bits (116), Expect = 2e-06
Identities = 49/210 (23%), Positives = 79/210 (37%), Gaps = 54/210 (25%)
Query: 31 RVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVL 90
R I L R + G+ G+ G+I+ ++ D L++P+G R++P + +
Sbjct: 7 REEIVRLGRSLFQRGYTVGSAGNISARLDDGG-------WLVTPTGSCLGRLDPARLSKV 59
Query: 91 SGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTM----- 144
+G LS KP K PL Y + GAV+H H ++
Sbjct: 60 DADGNWLSG-------DKPSKEV---PLHRAIYRNNPECGAVVHLHSTHLTALSCLGGLD 109
Query: 145 ----INPMSKEF--RITHMEMIKGIKGHGYY---DELVVPIIENTAYENELTDSLAKAID 195
+ P + + R+ H+ +I YY D + ++LA
Sbjct: 110 PTNVLPPFTPYYVMRVGHVPLIP------YYRPGDP-------------AIAEALAGLA- 149
Query: 196 AYPKATAVLVRNHGIYVWGDSWINAKTQAE 225
+ AVL+ NHG VWG S A E
Sbjct: 150 --ARYRAVLLANHGPVVWGSSLEAAVNATE 177
|
Length = 213 |
| >gnl|CDD|102532 PRK06755, PRK06755, hypothetical protein; Validated | Back alignment and domain information |
|---|
Score = 46.6 bits (110), Expect = 7e-06
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 11/124 (8%)
Query: 119 FMKA--YEKRDAGAVIHSHGIESCLVTMINPMSKE--FRITHMEMIKGIKGHGYYDELVV 174
FM A Y+K A ++ ++S L++ + E F +E + G +G E+ +
Sbjct: 81 FMHADIYKKSSAECILQVQTVDSHLISELYGEEGEVTFDKRSVERVFGKEG---ITEMTI 137
Query: 175 PIIENTAYENELTDSLAKAIDAYPK-ATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDA 233
PI+E+ E + D L + + + VLV N+G+ VWG + AK E YL +
Sbjct: 138 PIVED---EKKFADLLENNVPNFIEGGGVVLVHNYGMIVWGKTPEEAKKWLEGIEYLMNY 194
Query: 234 AIKL 237
+KL
Sbjct: 195 HVKL 198
|
Length = 209 |
| >gnl|CDD|188107 TIGR01086, fucA, L-fuculose phosphate aldolase | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 3e-05
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 21/115 (18%)
Query: 34 ISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN 93
I + C LG GT G+++++ D +L++P+G+ E++ E + + GN
Sbjct: 9 IIDTCLEMTRLGLNQGTAGNVSVRYKDG--------MLITPTGIPYEKLTTEHIVYVDGN 60
Query: 94 GTTLSSPSPKPYPHKPPKCSDCAPLF-MKAYEKR-DAGAVIHSHGIESCLVTMIN 146
G H+ K F + Y+ R DA AV+H+H I V+++N
Sbjct: 61 GK-----------HEEGKLPSSEWQFHLSVYQTRPDANAVVHNHAIHCAAVSILN 104
|
Members of this family are L-fuculose phosphate aldolase from various Proteobacteria, encoded in fucose utilization operons. Homologs in other bacteria given similar annotation but scoring below the trusted cutoff may share extensive sequence similarity but are not experimenally characterized and are not found in apparent fucose utilization operons; we consider their annotation as L-fuculose phosphate aldolase to be tenuous. This model has been narrowed in scope from the previous version [Energy metabolism, Sugars]. Length = 214 |
| >gnl|CDD|181226 PRK08087, PRK08087, L-fuculose phosphate aldolase; Provisional | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 4e-05
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 19/114 (16%)
Query: 34 ISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN 93
I + C LG GT G+++++ D +L++P+G+ E++ + + GN
Sbjct: 10 IIDTCLEMTRLGLNQGTAGNVSVRYQDG--------MLITPTGIPYEKLTESHIVFVDGN 61
Query: 94 GTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMIN 146
G K K P S M AY+ R DA AV+H+H + V+++N
Sbjct: 62 G--------KHEEGKLP--SSEWRFHMAAYQTRPDANAVVHNHAVHCTAVSILN 105
|
Length = 215 |
| >gnl|CDD|235829 PRK06557, PRK06557, L-ribulose-5-phosphate 4-epimerase; Validated | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 4e-04
Identities = 46/211 (21%), Positives = 80/211 (37%), Gaps = 64/211 (30%)
Query: 26 AVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPE 85
V++ R + +L G V T G+++ + L+++ PSGV + + PE
Sbjct: 7 MVEKLREEVCKLHLELPKYGLVVWTSGNVSARDPGTD------LVVIKPSGVSYDDLTPE 60
Query: 86 DMYVLSGNGTTLS---SPSPKPYPHKPPKCSDCAPLFMKAYEKR---DAGAVIHSHGIES 139
DM V+ +G + PS SD A Y R D G V+H+H +
Sbjct: 61 DMVVVDLDGNVVEGDLKPS-----------SDTAS---HLYVYRHMPDVGGVVHTHSTYA 106
Query: 140 -----------CLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTD 188
C++T M+ EF G +P+ + +
Sbjct: 107 TAWAARGEPIPCVLTA---MADEF-----------GGP-------IPV---GPFALIGDE 142
Query: 189 SLAKAID---AYPKATAVLVRNHGIYVWGDS 216
++ K I ++ AVL++NHG++ G
Sbjct: 143 AIGKGIVETLKGGRSPAVLMQNHGVFTIGKD 173
|
Length = 221 |
| >gnl|CDD|130495 TIGR01428, HAD_type_II, 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Score = 38.5 bits (90), Expect = 0.003
Identities = 32/115 (27%), Positives = 43/115 (37%), Gaps = 14/115 (12%)
Query: 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFD---TAVGN 432
DVP L G ++ I S+GS L + G L FD +A
Sbjct: 92 PPHPDVPAGLRALKERGYRLAILSNGS--PAMLKSLVKHAG-----LDDPFDAVLSADAV 144
Query: 433 KRETPS---YVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGP 484
+ P+ Y +LGV P E+LFV + AK G + RPG P
Sbjct: 145 RAYKPAPQVYQLALEALGVP-PDEVLFVASNPWDLGGAKKFGFKTAWVNRPGEPP 198
|
Catalyzes the hydrolytic dehalogenation of small L-2-haloalkanoic acids to yield the corresponding D-2-hydroxyalkanoic acids. Belongs to the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), class (subfamily) I. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. Length = 198 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 500 | |||
| PRK06833 | 214 | L-fuculose phosphate aldolase; Provisional | 100.0 | |
| PRK05874 | 217 | L-fuculose-phosphate aldolase; Validated | 100.0 | |
| PRK08087 | 215 | L-fuculose phosphate aldolase; Provisional | 100.0 | |
| PRK08193 | 231 | araD L-ribulose-5-phosphate 4-epimerase; Reviewed | 100.0 | |
| PRK13213 | 231 | araD L-ribulose-5-phosphate 4-epimerase; Reviewed | 100.0 | |
| PRK05834 | 194 | hypothetical protein; Provisional | 100.0 | |
| PRK12348 | 228 | sgaE L-ribulose-5-phosphate 4-epimerase; Reviewed | 100.0 | |
| TIGR00760 | 231 | araD L-ribulose-5-phosphate 4-epimerase. The homol | 100.0 | |
| PRK07490 | 245 | hypothetical protein; Provisional | 100.0 | |
| cd00398 | 209 | Aldolase_II Class II Aldolase and Adducin head (N- | 100.0 | |
| PRK12347 | 231 | sgbE L-ribulose-5-phosphate 4-epimerase; Reviewed | 100.0 | |
| PRK06755 | 209 | hypothetical protein; Validated | 100.0 | |
| PRK08130 | 213 | putative aldolase; Validated | 100.0 | |
| PRK06557 | 221 | L-ribulose-5-phosphate 4-epimerase; Validated | 100.0 | |
| PRK06754 | 208 | mtnB methylthioribulose-1-phosphate dehydratase; R | 100.0 | |
| PRK13145 | 234 | araD L-ribulose-5-phosphate 4-epimerase; Provision | 100.0 | |
| PRK06486 | 262 | hypothetical protein; Provisional | 100.0 | |
| PRK09220 | 204 | methylthioribulose-1-phosphate dehydratase; Provis | 100.0 | |
| PRK06661 | 231 | hypothetical protein; Provisional | 100.0 | |
| TIGR01086 | 214 | fucA L-fuculose phosphate aldolase. Members of thi | 100.0 | |
| PRK07090 | 260 | class II aldolase/adducin domain protein; Provisio | 100.0 | |
| PRK06357 | 216 | hypothetical protein; Provisional | 100.0 | |
| PRK06208 | 274 | hypothetical protein; Provisional | 100.0 | |
| PRK07044 | 252 | aldolase II superfamily protein; Provisional | 100.0 | |
| PRK08333 | 184 | L-fuculose phosphate aldolase; Provisional | 100.0 | |
| TIGR03328 | 193 | salvage_mtnB methylthioribulose-1-phosphate dehydr | 100.0 | |
| PRK08660 | 181 | L-fuculose phosphate aldolase; Provisional | 100.0 | |
| COG0235 | 219 | AraD Ribulose-5-phosphate 4-epimerase and related | 100.0 | |
| PRK03634 | 274 | rhamnulose-1-phosphate aldolase; Provisional | 100.0 | |
| TIGR02624 | 270 | rhamnu_1P_ald rhamnulose-1-phosphate aldolase. Mem | 100.0 | |
| PF00596 | 184 | Aldolase_II: Class II Aldolase and Adducin N-termi | 100.0 | |
| KOG2631 | 238 | consensus Class II aldolase/adducin N-terminal dom | 100.0 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 99.95 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.95 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.94 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 99.94 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 99.93 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 99.93 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 99.93 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 99.93 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 99.92 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 99.92 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 99.92 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 99.92 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 99.92 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 99.91 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 99.91 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 99.91 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 99.91 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 99.91 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 99.91 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 99.91 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 99.9 | |
| PLN02940 | 382 | riboflavin kinase | 99.9 | |
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 99.9 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 99.9 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 99.9 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 99.89 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 99.89 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 99.88 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 99.88 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 99.87 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 99.87 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 99.86 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 99.86 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 99.86 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 99.86 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 99.85 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 99.85 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.84 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 99.84 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 99.83 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 99.83 | |
| PLN02811 | 220 | hydrolase | 99.82 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 99.82 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 99.81 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 99.81 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 99.81 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 99.79 | |
| PRK06769 | 173 | hypothetical protein; Validated | 99.79 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 99.78 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 99.78 | |
| COG3347 | 404 | Uncharacterized conserved protein [Function unknow | 99.78 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 99.76 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 99.75 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.74 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 99.74 | |
| KOG2630 | 254 | consensus Enolase-phosphatase E-1 [Amino acid tran | 99.74 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 99.73 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.73 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 99.71 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 99.7 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.68 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 99.67 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 99.66 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 99.65 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.64 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 99.61 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.6 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.58 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 99.57 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.55 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 99.46 | |
| KOG3699 | 598 | consensus Cytoskeletal protein Adducin [Signal tra | 99.46 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.45 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.45 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.45 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 99.45 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.44 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.44 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.36 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 99.36 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.36 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 99.35 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.34 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 99.3 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 99.3 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 99.29 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.29 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.28 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 99.28 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 99.26 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.24 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 99.23 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 99.22 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 99.18 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 99.14 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 99.13 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 99.1 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 99.09 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 99.07 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 99.02 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.99 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.98 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 98.95 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 98.91 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 98.87 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 98.84 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 98.8 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 98.77 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.77 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.74 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 98.73 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.73 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.67 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 98.67 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.55 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 98.49 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 98.46 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 98.45 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 98.4 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.36 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 98.35 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 98.34 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 98.34 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 98.33 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.22 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.22 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 98.21 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 98.19 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 98.17 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 98.14 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 98.13 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.04 | |
| PF05761 | 448 | 5_nucleotid: 5' nucleotidase family; InterPro: IPR | 97.89 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 97.88 | |
| KOG3699 | 598 | consensus Cytoskeletal protein Adducin [Signal tra | 97.88 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 97.83 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 97.83 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 97.8 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.8 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 97.76 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 97.72 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 97.7 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 97.67 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 97.63 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 97.56 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.49 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 97.46 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 97.43 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.33 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 97.27 | |
| COG5663 | 194 | Uncharacterized conserved protein [Function unknow | 97.23 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 97.22 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 97.16 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 97.05 | |
| KOG2961 | 190 | consensus Predicted hydrolase (HAD superfamily) [G | 96.95 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 96.82 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 96.74 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 96.68 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 96.6 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 96.59 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 96.51 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 96.51 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 96.49 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 96.46 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 96.45 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 96.44 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 96.35 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 96.32 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 96.16 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 96.14 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 96.14 | |
| TIGR01658 | 274 | EYA-cons_domain eyes absent protein conserved doma | 96.1 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 95.96 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 95.96 | |
| KOG2470 | 510 | consensus Similar to IMP-GMP specific 5'-nucleotid | 95.91 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 95.86 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 95.86 | |
| PLN02887 | 580 | hydrolase family protein | 95.79 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 95.62 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 95.62 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 95.55 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 95.5 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 95.47 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 95.46 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 95.31 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 95.3 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 95.28 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 95.28 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 95.2 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 95.13 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 95.03 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 94.87 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 94.74 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 94.59 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 94.59 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 94.49 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 94.42 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 94.21 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 94.19 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 94.16 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 93.76 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 93.43 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 93.4 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 93.23 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 92.88 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 92.58 | |
| PLN02423 | 245 | phosphomannomutase | 92.54 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 92.4 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 92.29 | |
| KOG2134 | 422 | consensus Polynucleotide kinase 3' phosphatase [Re | 91.68 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 91.12 | |
| COG5610 | 635 | Predicted hydrolase (HAD superfamily) [General fun | 90.55 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 89.69 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 89.68 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 89.57 | |
| PLN03017 | 366 | trehalose-phosphatase | 89.42 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 89.24 | |
| PLN02887 | 580 | hydrolase family protein | 89.09 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 88.9 | |
| PLN02580 | 384 | trehalose-phosphatase | 88.5 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 88.17 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 87.82 | |
| PLN02151 | 354 | trehalose-phosphatase | 87.7 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 85.57 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 85.53 | |
| COG5083 | 580 | SMP2 Uncharacterized protein involved in plasmid m | 84.55 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 84.54 | |
| KOG2116 | 738 | consensus Protein involved in plasmid maintenance/ | 84.08 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 83.73 | |
| KOG2469 | 424 | consensus IMP-GMP specific 5'-nucleotidase [Nucleo | 82.97 | |
| PF06189 | 264 | 5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103 | 82.51 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 81.34 | |
| PRK11840 | 326 | bifunctional sulfur carrier protein/thiazole synth | 81.0 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 80.71 | |
| cd04728 | 248 | ThiG Thiazole synthase (ThiG) is the tetrameric en | 80.09 |
| >PRK06833 L-fuculose phosphate aldolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-45 Score=342.15 Aligned_cols=201 Identities=22% Similarity=0.322 Sum_probs=175.2
Q ss_pred cHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCC
Q 010820 26 AVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPY 105 (500)
Q Consensus 26 ~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~ 105 (500)
..+++|++|+++||+++++||+.+++||||+|++++ +.|||||||.++++|+++||++||++|++++|. .+|
T Consensus 2 ~~~~~r~~i~~~~~~l~~~gl~~g~~GniS~r~~~~------~~~~ItpsG~~~~~l~~~div~vd~~g~~i~g~-~~p- 73 (214)
T PRK06833 2 LLQKEREEIVAYGKKLISSGLTKGTGGNISIFNREQ------GLMAITPSGIDYFEIKPEDIVIMDLDGKVVEGE-RKP- 73 (214)
T ss_pred chHHHHHHHHHHHHHHHHcCCCCCCCceEEEEeCCC------CEEEEcCCCCChhhCCHHHEEEEcCCCCCcCCC-CCC-
Confidence 356789999999999999999999999999999763 489999999999999999999999999999986 355
Q ss_pred CCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCC-CCc
Q 010820 106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYE 183 (500)
Q Consensus 106 ~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~-~~~ 183 (500)
|+|+.||++|||+| |++||+|+||+|+++||+.+. ++|...+... .+++ .||+.+|. +++
T Consensus 74 -------s~E~~lH~~iy~~rpdv~aVvH~H~~~a~a~s~~~~---~lp~~~~~~~-~~~~-------~i~~~~y~~~gs 135 (214)
T PRK06833 74 -------SSELDMHLIFYRNREDINAIVHTHSPYATTLACLGW---ELPAVHYLIA-VAGP-------NVRCAEYATFGT 135 (214)
T ss_pred -------CccHHHHHHHHHhCCCCCEEEEeCcHHHHHHHHcCC---CCCcchhHHH-HHCC-------CeeeccCCCCCh
Confidence 89999999999999 999999999999999999975 3544333322 2222 38999885 699
Q ss_pred hhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccccc
Q 010820 184 NELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFK 256 (500)
Q Consensus 184 ~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~ 256 (500)
.++++.++++|+++ ++|||+|||+++||+|+++||.+++++|++|++++.++++|.+..+ ++++++++.
T Consensus 136 ~~la~~v~~~l~~~---~~vll~nHGv~~~G~~~~eA~~~~e~lE~~a~~~~~a~~~G~~~~l-~~~~~~~~~ 204 (214)
T PRK06833 136 KELAENAFEAMEDR---RAVLLANHGLLAGANNLKNAFNIAEEIEFCAEIYYQTKSIGEPKLL-PEDEMENMA 204 (214)
T ss_pred HHHHHHHHHHhCcC---CEEEECCCCCEEEeCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC-CHHHHHHHH
Confidence 99999999999874 9999999999999999999999999999999999999999988775 444665543
|
|
| >PRK05874 L-fuculose-phosphate aldolase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-45 Score=341.07 Aligned_cols=201 Identities=22% Similarity=0.293 Sum_probs=174.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCC-CCCCC
Q 010820 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSP-SPKPY 105 (500)
Q Consensus 27 ~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~-~~~p~ 105 (500)
.+..|++|+++||+++++||+.+++||||+|++++ .|||||||+++++|+++||++||++|+++++. +.+|
T Consensus 4 ~~~~r~~i~~~~~~l~~~Gl~~g~~GNiS~R~~~~-------~~lITPsg~~~~~l~~~Div~vd~~G~~i~~~~~~kP- 75 (217)
T PRK05874 4 VDDPESAVLAAAKDMLRRGLVEGTAGNISARRSDG-------NVVITPSSVDYAEMLLHDLVLVDAGGAVLHAKDGRSP- 75 (217)
T ss_pred hHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCC-------CEEEeCCCCChhhCCHHHEEEEcCCCCEecCCCCCCC-
Confidence 45679999999999999999999999999999874 79999999999999999999999999999753 2345
Q ss_pred CCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCC-CCc
Q 010820 106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYE 183 (500)
Q Consensus 106 ~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~-~~~ 183 (500)
|+|+.||+.|||.| |++||+|+||+|+++||+.+. ++|....+....++| .+|+.+|. +++
T Consensus 76 -------ssE~~~H~~iY~~rpdv~aViHtH~~~a~a~s~~~~---~l~~~~~~~~~~~~~-------~v~~~~y~~~gs 138 (217)
T PRK05874 76 -------STELNLHLACYRAFDDIGSVIHSHPVWATMFAVAHE---PIPACIDEFAIYCGG-------DVRCTEYAASGT 138 (217)
T ss_pred -------chhHHHHHHHHHhCCCCCEEEECCcHHHHHHHHcCC---CCCcchhHHHHHcCC-------ceeeecCCCCCc
Confidence 89999999999999 999999999999999999875 344322222222223 39999995 689
Q ss_pred hhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccccc
Q 010820 184 NELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFK 256 (500)
Q Consensus 184 ~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~ 256 (500)
.+++++++++|+++ ++|||+|||+++||+|+++|+.+++.+|++|++++.++++|.+.++++ +++++..
T Consensus 139 ~ela~~v~~~l~~~---~~vlL~nHGv~~~G~~l~~A~~~~e~lE~~a~~~~~a~~~G~~~~l~~-e~~~~~~ 207 (217)
T PRK05874 139 PEVGRNAVRALEGR---AAALIANHGLVAVGPRPDQVLRVTALVERTAQIVWGARALGGPVPIPE-DVCRNFT 207 (217)
T ss_pred HHHHHHHHHHhCcC---CEEEEcCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCH-HHHHHhh
Confidence 99999999999974 999999999999999999999999999999999999999998877644 5777665
|
|
| >PRK08087 L-fuculose phosphate aldolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-45 Score=341.08 Aligned_cols=201 Identities=22% Similarity=0.317 Sum_probs=174.6
Q ss_pred ccHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCC
Q 010820 25 RAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKP 104 (500)
Q Consensus 25 ~~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p 104 (500)
|..+++|++|+++||+++++||+.+++||||+|+++ .|||||||.++++|+++||++||++|++++|. +|
T Consensus 1 ~~~~~~~~~l~~~~r~l~~~Gl~~~~~GNiS~R~~~--------~~lItpsG~~~~~l~~~di~~vd~~G~~~~g~--~p 70 (215)
T PRK08087 1 MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQD--------GMLITPTGIPYEKLTESHIVFVDGNGKHEEGK--LP 70 (215)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEcCC--------CEEEeCCCCChhhCCHHHEEEECCCCCCCCCC--CC
Confidence 457889999999999999999999999999999976 69999999999999999999999999999874 56
Q ss_pred CCCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeC-CCC
Q 010820 105 YPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIEN-TAY 182 (500)
Q Consensus 105 ~~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~-~~~ 182 (500)
|+|+.||+.|||.| |++||+|+||+|++++|+... ++|....... .+++ ..||+++| .++
T Consensus 71 --------s~E~~lH~~iy~~rpdv~aViH~H~~~~~a~s~~~~---~ip~~~~~~~-~~~~------~~v~~~~y~~~g 132 (215)
T PRK08087 71 --------SSEWRFHMAAYQTRPDANAVVHNHAVHCTAVSILNR---PIPAIHYMIA-AAGG------NSIPCAPYATFG 132 (215)
T ss_pred --------ChhHHHHHHHHHhCCCCCEEEecCcHHHHHHHHcCC---CCCcHHHHHH-HHcC------CCceeecCCCCC
Confidence 89999999999999 999999999999999999875 3443332222 1211 13999998 469
Q ss_pred chhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccccc
Q 010820 183 ENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFK 256 (500)
Q Consensus 183 ~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~ 256 (500)
+.++++.++++|+++ +++||+|||+++||+|+++|+.+++++|++|++++.++++|.+....++++++++.
T Consensus 133 s~~la~~~~~~l~~~---~~vLl~nHGv~~~G~~~~~A~~~~e~lE~~a~~~~~a~~~g~~~~~l~~e~~~~~~ 203 (215)
T PRK08087 133 TRELSEHVALALKNR---KATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLKTLAITDPVPVLSDEEIAVVL 203 (215)
T ss_pred CHHHHHHHHHHhCcC---CEEEecCCCCEEEcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 999999999999874 99999999999999999999999999999999999999999775445666776664
|
|
| >PRK08193 araD L-ribulose-5-phosphate 4-epimerase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-44 Score=336.72 Aligned_cols=204 Identities=20% Similarity=0.281 Sum_probs=170.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCCC
Q 010820 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYP 106 (500)
Q Consensus 27 ~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~~ 106 (500)
++++|++|+++||+|+++||+.+++||||+|++++ +.|||||||.++++|+++||++||++|++++|. .+|
T Consensus 2 ~~~~r~~i~~~~~~l~~~gl~~g~~GNiS~r~~~~------~~~~ItpsG~~~~~l~~~Div~vd~dG~~~~g~-~kP-- 72 (231)
T PRK08193 2 LEDLKQEVLEANLALPKHGLVTFTWGNVSAIDRER------GLFVIKPSGVDYDKMTAEDMVVVDLEGNVVEGK-LKP-- 72 (231)
T ss_pred hHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEecCC------CEEEEeCCCCChhhCChHHEEEECCCCCCCCCC-CCc--
Confidence 56799999999999999999999999999998663 379999999999999999999999999999986 456
Q ss_pred CCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCCC----
Q 010820 107 HKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTA---- 181 (500)
Q Consensus 107 ~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~~---- 181 (500)
|+|+.||+.|||+| |++||+|+||||+++||+.+.. +|.........+.| .||++||.+
T Consensus 73 ------SsE~~~H~~IYr~rpdv~AVvHtHsp~ata~s~~~~~---l~~~~~~~~~~~~~-------~ip~~~~~~~~~~ 136 (231)
T PRK08193 73 ------SSDTPTHLVLYKAFPEIGGIVHTHSRHATAWAQAGRD---IPALGTTHADYFYG-------DIPCTRKMTDEEI 136 (231)
T ss_pred ------CccHHHHHHHHHhCCCCcEEEecCcHHHHHHHhcCCC---CCcchHHHHHHhCC-------CcceecCCCcccc
Confidence 99999999999999 9999999999999999998643 43322211112223 399998743
Q ss_pred ---CchhHHHHHHHHHhhC----CCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccc
Q 010820 182 ---YENELTDSLAKAIDAY----PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRN 254 (500)
Q Consensus 182 ---~~~~l~~~v~~~l~~~----~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~ 254 (500)
+..++++.+++.|+++ ++.+++||+|||+++||+|+++|+.+++.+|++|++++.++++|.+....+++++++
T Consensus 137 ~~~~~~~~~~~ia~~l~~~~~~~~~~~avLl~nHG~v~~G~~l~eA~~~~e~lE~~a~~~~~a~~lg~~~~~l~~e~~~~ 216 (231)
T PRK08193 137 NGEYEWETGKVIVETFEKRGIDPAAVPGVLVHSHGPFTWGKDAEDAVHNAVVLEEVAKMAYFTRQLNPQLPDMQQTLLDK 216 (231)
T ss_pred cccchhhHHHHHHHHHhhccCCcccCCEEEEcCCCceEecCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCHHHHHH
Confidence 3457899999999863 245899999999999999999999999999999999999999994443344446554
Q ss_pred c
Q 010820 255 F 255 (500)
Q Consensus 255 ~ 255 (500)
.
T Consensus 217 ~ 217 (231)
T PRK08193 217 H 217 (231)
T ss_pred H
Confidence 4
|
|
| >PRK13213 araD L-ribulose-5-phosphate 4-epimerase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-43 Score=332.37 Aligned_cols=202 Identities=19% Similarity=0.233 Sum_probs=169.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCC-CCcccCCCCCCC
Q 010820 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN-GTTLSSPSPKPY 105 (500)
Q Consensus 27 ~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~-g~~~~g~~~~p~ 105 (500)
++++|++|+++||+|+++||+.+++||||+|++++ +.|+|||||+++++|+++||++||++ |++++|. .+|
T Consensus 2 ~~~~r~evv~~~~~l~~~gl~~gt~GNiS~r~~~~------~~~~ITpsg~~~~~l~~~div~vd~~~g~~~~g~-~kP- 73 (231)
T PRK13213 2 LEQLKQQVFEANLALPKYKLVTFTWGNVSGIDREH------GLVVIKPSGVEYDVMSVNDMVVVDLATGKVVEGD-KKP- 73 (231)
T ss_pred hHHHHHHHHHHHHHHHHCCCCCCCcceEEEEECCC------CEEEEECCCCCcccCCHHHEEEEEcCCCCCcCCC-CCc-
Confidence 56789999999999999999999999999998653 38999999999999999999999995 9999986 466
Q ss_pred CCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCCC---
Q 010820 106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTA--- 181 (500)
Q Consensus 106 ~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~~--- 181 (500)
|+|+.||+.|||.| |++||||+||+|+++||+.+.+ +|.........+.| .||+.+|.+
T Consensus 74 -------SsE~~lH~~iY~~rpdv~AViHtHs~~at~~a~~~~~---lp~~~~~~~~~~~g-------~Ip~~~~~~~~~ 136 (231)
T PRK13213 74 -------SSDTDTHLVLYRAFAEIGGIVHTHSRHATIWAQAGKS---LSALGTTHADYFYG-------PIPCTRLMTEAE 136 (231)
T ss_pred -------CccHHHHHHHHHhCCCCCEEEEcCCHHHHHHHHcCCC---CCCcchHHHHHhCC-------Ccceeecccccc
Confidence 99999999999999 9999999999999999999753 44322222222333 389988853
Q ss_pred --Cc--hhHHHHHHHHHhhC----CCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCCCCCc
Q 010820 182 --YE--NELTDSLAKAIDAY----PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL-GLDWSTPNHGPT 252 (500)
Q Consensus 182 --~~--~~l~~~v~~~l~~~----~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~-g~~~~~~~~~~~ 252 (500)
++ .++++.+++.+++. ++.+++||+|||++++|+|+++||.+++.+|++|++++.++++ |++.+++++ .+
T Consensus 137 ~~g~~~~~~~~~~a~~~~~~~~~~~~~~avlL~nHG~v~~G~~l~eA~~~~e~lE~~A~i~~~a~~l~g~~~~l~~~-~~ 215 (231)
T PRK13213 137 ITGDYEHETGKVIVETFAEQGLRAADIPAVLVNGHGPFAWGSNAANAVHNAVVLEEIAYMNLFTHQLTPGVGDMQQT-LL 215 (231)
T ss_pred cCCccccchHHHHHHHHHhhcccccCCCEEEECCCCcEEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHH-HH
Confidence 44 48889999988652 3458999999999999999999999999999999999999999 777776655 44
Q ss_pred cc
Q 010820 253 RN 254 (500)
Q Consensus 253 ~~ 254 (500)
++
T Consensus 216 ~~ 217 (231)
T PRK13213 216 DK 217 (231)
T ss_pred HH
Confidence 33
|
|
| >PRK05834 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-43 Score=325.21 Aligned_cols=186 Identities=8% Similarity=0.097 Sum_probs=161.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCCC
Q 010820 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYP 106 (500)
Q Consensus 27 ~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~~ 106 (500)
.+++|++|++++|+|+++||+.+++||||+|++++ .|+|||||.++++|+++||++| ++|+.+++ .+|
T Consensus 3 ~~~~~~el~~~~~~l~~~gl~~gt~GNiS~R~~~~-------~~lITPsG~~~~~l~~ediv~v-~~g~~~~~--~kP-- 70 (194)
T PRK05834 3 DSNLIDELKSISLSMFRKNFFGLYHGSISAKIEAN-------QFIINKQNAIFDELDENSLIVL-YDKKDYRW--KEA-- 70 (194)
T ss_pred HHHHHHHHHHHHHHHHHCCCcccccceEEEEeCCC-------cEEEeCCCCccccCCHHHeEEE-eCCCccCC--CCC--
Confidence 45789999999999999999999999999999763 7999999999999999999999 89987765 356
Q ss_pred CCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCC-CCch
Q 010820 107 HKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYEN 184 (500)
Q Consensus 107 ~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~-~~~~ 184 (500)
|+|++||+.|||.| |++||+|+||+|++++|+.+. ++|+..+++... .| .||+++|. +++.
T Consensus 71 ------SsE~~~H~~IY~~rpdv~AVvHtHs~~ata~s~~~~---~i~~~~~~~~~~-~g-------~ipv~~~~~~~~~ 133 (194)
T PRK05834 71 ------SIDSPIHASIYKNISEAKFIAYAMPPYTTAYSLRHN---KILPRDYFGYRS-LG-------EISIYDPKDFDDW 133 (194)
T ss_pred ------CccHHHHHHHHhcCCCCCEEEEeCCHHHHHHHhcCC---CcCccChhHHhh-CC-------eeeecCccccchH
Confidence 99999999999999 999999999999999999864 465555555432 23 39999874 4443
Q ss_pred --hHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 010820 185 --ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGL 242 (500)
Q Consensus 185 --~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~ 242 (500)
+++++++++|++. +.+++||+|||+++||+|+++||.+++.+|++|++++.++++|.
T Consensus 134 ~~~la~~v~~~l~~~-~~~avLL~nHGvv~~G~~l~eA~~~~e~lE~~a~i~~~a~~~~~ 192 (194)
T PRK05834 134 YERADTEILRYLQEK-NKNFVVIKGYGVYAYARDIYELAKKIAILENSCKILRLSDLMDR 192 (194)
T ss_pred HHhHHHHHHHHHhhc-CCCEEEEcCCcceEECCCHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 5789999999873 23599999999999999999999999999999999999999885
|
|
| >PRK12348 sgaE L-ribulose-5-phosphate 4-epimerase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-43 Score=334.79 Aligned_cols=201 Identities=17% Similarity=0.241 Sum_probs=167.4
Q ss_pred HHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCCCC
Q 010820 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPH 107 (500)
Q Consensus 28 ~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~~~ 107 (500)
+++|++|+++||+|+++||+.+++||||+|++++ +.|||||||.++++|+++||++||++|++++|. .+|
T Consensus 2 ~~~~~~l~~~~~~l~~~Gl~~g~~GNiS~r~~~~------~~~lItPsG~~~~~l~~~dlv~vd~dG~~ieg~-~kp--- 71 (228)
T PRK12348 2 QKLKQQVFEANMDLPRYGLVTFTWGNVSAIDRER------GLVVIKPSGVAYETMKADDMVVVDMSGKVVEGE-YRP--- 71 (228)
T ss_pred HHHHHHHHHHHHHHHHcCCCCcCCCeEEEEeCCC------CEEEEeCCCCChhhCCHHHEEEECCCCCCCCCC-CCC---
Confidence 4689999999999999999999999999998763 489999999999999999999999999999986 456
Q ss_pred CCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccc-hhhHhhhhcCCcccCcceeeeeeCCC----
Q 010820 108 KPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRIT-HMEMIKGIKGHGYYDELVVPIIENTA---- 181 (500)
Q Consensus 108 ~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~vp~~~~~~---- 181 (500)
|+|+.||+.|||+| |++||||+||||+++||+.+.+ +|.. ..+.. .+.| .||++++.+
T Consensus 72 -----ssE~~lH~~IYr~rpdv~aVvHtH~p~ata~a~~~~~---ip~~~~~~~~-~~~g-------~i~~~~~~~~~~~ 135 (228)
T PRK12348 72 -----SSDTATHLELYRRYPSLGGIVHTHSTHATAWAQAGLA---IPALGTTHAD-YFFG-------DIPCTRGLSEEEV 135 (228)
T ss_pred -----CccHHHHHHHHHhCCCCCEEEecCcHHHHHHHHcCCC---CCCccHHHHH-HhCC-------CeeeecCCCchhh
Confidence 89999999999999 9999999999999999999753 4433 22222 2223 388887622
Q ss_pred ---CchhHHHHHHHHHhhC--CCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCCCCCCcccc
Q 010820 182 ---YENELTDSLAKAIDAY--PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGL-DWSTPNHGPTRNF 255 (500)
Q Consensus 182 ---~~~~l~~~v~~~l~~~--~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~-~~~~~~~~~~~~~ 255 (500)
...++++.++++|++. .+.+++||+|||++++|+|+.+||.+++++|++|++++.++++|. +.++ +++.+++.
T Consensus 136 ~~~~~~~~~~~la~~l~~~~~~~~~avlL~nHG~v~~G~~l~eA~~~~~~lE~~a~~~~~a~~lg~~~~~~-~~~~~~~~ 214 (228)
T PRK12348 136 QGEYELNTGKVIIETLGNAEPLHTPGIVVYQHGPFAWGKDAHDAVHNAVVMEEVAKMAWIARGINPQLNHI-DSYLMNKH 214 (228)
T ss_pred ccchhhhHHHHHHHHHhhcCcccCcEEEEcCCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCC-CHHHHHHH
Confidence 2346788999999863 134799999999999999999999999999999999999999996 4454 44454443
|
|
| >TIGR00760 araD L-ribulose-5-phosphate 4-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-43 Score=334.10 Aligned_cols=204 Identities=20% Similarity=0.272 Sum_probs=170.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCC-CCcccCCCCCCC
Q 010820 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN-GTTLSSPSPKPY 105 (500)
Q Consensus 27 ~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~-g~~~~g~~~~p~ 105 (500)
.+++|++|+++||+|+++||+.+++||||+|++++ +.|||||||.++++|+++||++||++ |++++|. .+|
T Consensus 2 ~~~~~~ei~~~~~~l~~~gl~~~~~GNiS~R~~~~------~~~lITPsG~~~~~l~~~div~vdl~~G~~i~g~-~kp- 73 (231)
T TIGR00760 2 LEQLKKEVLEANLALPKHQLVTFTWGNVSAIDRER------GLVVIKPSGVEYDVMTADDMVVVDLETGNVVEGS-KKP- 73 (231)
T ss_pred hHHHHHHHHHHHHHHHHCCCCCCCCCeEEEEecCC------CEEEEeCCCCChhhCCHHHEEEEcCcCCccCCCC-CCC-
Confidence 56789999999999999999999999999998663 47999999999999999999999999 9999986 456
Q ss_pred CCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccch-hhHhhhhcCCcccCcceeeeeeCC---
Q 010820 106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITH-MEMIKGIKGHGYYDELVVPIIENT--- 180 (500)
Q Consensus 106 ~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~vp~~~~~--- 180 (500)
|+|+.||+.|||+| |++||||+||||+++||+.+.+ +|... .+.. .+.| .||++++.
T Consensus 74 -------S~E~~lH~~IYr~rpdv~aVvHtH~p~ata~a~~~~~---lp~~~~~~~~-~~~g-------~ip~~~~~~~~ 135 (231)
T TIGR00760 74 -------SSDTPTHLALYRAFPSIGGIVHTHSRHATIWAQAGKD---IPALGTTHAD-YFYG-------TIPCTRPMTDE 135 (231)
T ss_pred -------CccHHHHHHHHHhCCCCCEEEecCcHHHHHHHHcCCC---CCCcchHHHH-HhCC-------ceeeecCCCcc
Confidence 99999999999999 9999999999999999999753 44332 2222 2223 38887753
Q ss_pred ----CCchhHHHHHHHHHhhC----CCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCc
Q 010820 181 ----AYENELTDSLAKAIDAY----PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPT 252 (500)
Q Consensus 181 ----~~~~~l~~~v~~~l~~~----~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~ 252 (500)
+...++++.++++|+++ .+.+++||+|||++++|+|+.+||.+++++|++|++++.++++|.+....+++++
T Consensus 136 ~~~~~~~~~~~~~la~~l~~~~~~~~~~~avlL~nHGvv~~G~~l~eA~~~~e~lE~~Ak~~~~a~~~g~~~~~~~~~~~ 215 (231)
T TIGR00760 136 EINGEYELETGKVIVETFEKRGIDPAQIPGVLVHSHGPFAWGKDAANAVHNAVVLEEVAYMALFSRQLNPQLPPMQQTLL 215 (231)
T ss_pred cccccchHhHHHHHHHHHhhccCCcccCCEEEEcCCCceEecCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCHHHH
Confidence 23457899999999863 1237999999999999999999999999999999999999999974444455565
Q ss_pred cccc
Q 010820 253 RNFK 256 (500)
Q Consensus 253 ~~~~ 256 (500)
++..
T Consensus 216 ~~~~ 219 (231)
T TIGR00760 216 DKHY 219 (231)
T ss_pred HHHH
Confidence 5443
|
The homolog to this family from Mycobacterium smegmatis is flanked by putative araB and araA genes, consistent with it also being araD. |
| >PRK07490 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-44 Score=338.55 Aligned_cols=209 Identities=15% Similarity=0.179 Sum_probs=176.3
Q ss_pred HhhccHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCC-CcccCC
Q 010820 22 LEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNG-TTLSSP 100 (500)
Q Consensus 22 ~~~~~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g-~~~~g~ 100 (500)
|-+|+++++|++|+++||.++++||+.+++||||+|++++ ++.|||||||.++++|+++||++||++| ++++|.
T Consensus 3 ~~~~~~~~~r~~l~~~~r~l~~~Gl~~g~~GniS~r~~~~-----~~~~lItpsG~~~~~l~~~div~vd~dg~~~~~g~ 77 (245)
T PRK07490 3 MALSDEEQIRVDLAAAFRWIARLGMHEAVANHFSAAVSAD-----GKQFLLNPKWKHFSRIRASDLLLLDADDPSTAERP 77 (245)
T ss_pred cccHHHHHHHHHHHHHHHHHHHcCCcccccceEEEEccCC-----CCeEEEcCCCCChhhCcHHHeEEEcCCCCcccCCC
Confidence 4467788999999999999999999999999999999742 2489999999999999999999999999 567775
Q ss_pred CCCCCCCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeee-e
Q 010820 101 SPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPII-E 178 (500)
Q Consensus 101 ~~~p~~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~-~ 178 (500)
+.+| |+|+.||+.|||.| |++||||+||+|+++||+...+ .+|....+... +.| .||++ +
T Consensus 78 ~~~p--------sse~~lH~~iYr~rpdv~aVvHtH~~~ata~s~~~~~--~lp~~~~~~~~-~~g-------~v~~~~~ 139 (245)
T PRK07490 78 DVPD--------ATAWAIHGQIHRRLPHARCVMHVHSVYATALACLADP--TLPPIDQNTAR-FFN-------RVAVDTL 139 (245)
T ss_pred CCCC--------cHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHhcCC--CCCCccHHHHH-HcC-------CeeeccC
Confidence 4334 89999999999999 9999999999999999998642 24433322222 223 38886 4
Q ss_pred CC-CCchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccccc
Q 010820 179 NT-AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFK 256 (500)
Q Consensus 179 ~~-~~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~ 256 (500)
|. +++.++++.++++|++ .++|||+|||+++||+|+++|+.+++.+|++|++++.++++|.+....+++++++..
T Consensus 140 y~~~~~~ela~~v~~~l~~---~~avlL~nHG~v~~G~~~~eA~~~~e~lE~~a~~~l~a~~~G~~~~~l~~~~~~~~~ 215 (245)
T PRK07490 140 YGGMALEEEGERLAGLLGD---KRRLLMGNHGVLVTGDTVAEAFDDLYYFERACQTYITALSTGQPLRVLSDAVAEKTA 215 (245)
T ss_pred CCCcCcHHHHHHHHHHhCc---CCEEEECCCCcEEecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 64 5789999999999997 499999999999999999999999999999999999999999875555666777754
|
|
| >cd00398 Aldolase_II Class II Aldolase and Adducin head (N-terminal) domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-43 Score=332.26 Aligned_cols=200 Identities=26% Similarity=0.424 Sum_probs=173.6
Q ss_pred HHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCCCCC
Q 010820 29 ETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHK 108 (500)
Q Consensus 29 ~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~~~~ 108 (500)
++|++|+++||.++++||+.+++||||+|++++ +.|||||||.++++++++||++||++|++++| .+|
T Consensus 2 ~~~~~l~~~~r~l~~~Gl~~~~~GniS~R~~~~------~~~~itpsG~~~~~l~~~dlv~vd~~g~~~~g--~~p---- 69 (209)
T cd00398 2 KLKRKIIAACLLLDLYGWVTGTGGNVSARDRDR------GYFLITPSGVDYEEMTASDLVVVDAQGKVVEG--KKP---- 69 (209)
T ss_pred hHHHHHHHHHHHHHHcCCcccCCceEEEEeCCC------CEEEEeCCCCChHHCCHhhEEEEcCCCCCcCC--CCC----
Confidence 478999999999999999999999999999873 48999999999999999999999999999985 356
Q ss_pred CCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCC-C--Cch
Q 010820 109 PPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-A--YEN 184 (500)
Q Consensus 109 p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~-~--~~~ 184 (500)
|+|+.||..|||+| |++||+|+||+|+++||+.+. .++|..+.++...+.+ .||++||. | ++.
T Consensus 70 ----s~E~~lH~~iy~~rpdv~aViHtH~~~~~a~s~~~~--~~~p~~~~~~~~~~~~-------~ip~~~~~~~~~~~~ 136 (209)
T cd00398 70 ----SSETPLHLALYRARPDIGCIVHTHSTHATAVSQLKE--GLIPAGHTACAVYFTG-------DIPCTPYMTPETGED 136 (209)
T ss_pred ----CccHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHhCC--CCCCcchHHHHHHcCC-------CeeecCCcCCCccHH
Confidence 89999999999999 999999999999999999874 2456555544433323 39999995 5 688
Q ss_pred hHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccccc
Q 010820 185 ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFK 256 (500)
Q Consensus 185 ~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~ 256 (500)
++++.+++.+.+ .+++||+|||+++||+|+++|+.+++++|++|++++.++++|++....++++++++.
T Consensus 137 ~la~~~~~~l~~---~~~vll~nHG~~~~G~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~l~~~~~~~~~ 205 (209)
T cd00398 137 EIGTQRALGFPN---SKAVLLRNHGLFAWGPTLDEAFHLAVVLEVAAEIQLKALSMGGQLPPISLELLNKEY 205 (209)
T ss_pred HHHHHHhcCCCc---CCEEEEcCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 999988888865 499999999999999999999999999999999999999999865445666776654
|
Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). Class II enzymes are further divided into two sub-classes A and B. This family includes class II A aldolases and adducins which has not been ascribed any enzymatic function. Members of this class are primarily bacterial and eukaryotic in origin and include L-fuculose-1-phosphate, L-rhamnulose-1-phosphate aldolases and L-ribulose-5-phosphate 4-epimerases. They all share the ability to promote carbon-carbon bond cleavage and stabilize enolate intermediates using divalent cations. |
| >PRK12347 sgbE L-ribulose-5-phosphate 4-epimerase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-43 Score=331.33 Aligned_cols=203 Identities=19% Similarity=0.277 Sum_probs=168.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeC-CCCcccCCCCCCC
Q 010820 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSG-NGTTLSSPSPKPY 105 (500)
Q Consensus 27 ~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~-~g~~~~g~~~~p~ 105 (500)
++++|++|+++||+|+++||+.+++||||+|++++ +.|||||||+++++|+++||++||+ +|++++|. .+|
T Consensus 2 ~~~~~~~iv~~~~~l~~~gl~~~t~GNiS~R~~~~------~~~~ItPsG~~~~~l~~~div~vd~~~G~~i~g~-~kp- 73 (231)
T PRK12347 2 LEQLKADVLAANLALPAHHLVTFTWGNVSAVDETR------QLMVIKPSGVEYDVMTADDMVVVEIASGKVVEGS-KKP- 73 (231)
T ss_pred hHHHHHHHHHHHHHHHHCCCCCCCCceEEEEecCC------CeEEEeCCCCCcccCCHHHEEEEEcCCCcCCCCC-CCc-
Confidence 57789999999999999999999999999998663 4799999999999999999999999 99999986 356
Q ss_pred CCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCC----
Q 010820 106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT---- 180 (500)
Q Consensus 106 ~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~---- 180 (500)
|+|+.||+.|||.| |++||||+||+|+++||+.+.+ +|.........+.| .||+.+|.
T Consensus 74 -------S~E~~lH~~iYr~rpdv~aViHtHs~~ata~a~~~~~---lp~~~~~~~~~~~g-------~Ip~~~~~~~~~ 136 (231)
T PRK12347 74 -------SSDTPTHLALYRRYPEIGGIVHTHSRHATIWSQAGLD---LPAWGTTHADYFYG-------AIPCTRLMTAEE 136 (231)
T ss_pred -------CccHHHHHHHHHhCCCCCEEEecCcHHHHHHHHcCCC---CCCcchHHHHHhCC-------ceeeecccCchh
Confidence 89999999999999 9999999999999999999753 44331112222323 38888763
Q ss_pred ---CCchhHHHHHHHHHhhC----CCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcc
Q 010820 181 ---AYENELTDSLAKAIDAY----PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTR 253 (500)
Q Consensus 181 ---~~~~~l~~~v~~~l~~~----~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~ 253 (500)
++..++++.++++|+.+ ++.++|||+|||++++|+|+.+||.+++++|++|++++.++++|.+....+++.++
T Consensus 137 ~a~~~~~e~~~~va~~l~~~~~~~~~~~avLL~NHG~v~~G~~l~eA~~~~e~lE~~A~~~~~a~~lg~~~~~~~~~~~~ 216 (231)
T PRK12347 137 INGEYEYQTGEVIIETFEERGISPAQIPAVLVHSHGPFAWGKNAADAVHNAVVLEECAYMGLFSRQLAPQLPAMQNELLD 216 (231)
T ss_pred cccccchhhHHHHHHHHhhccccccCCCEEEEcCCCceEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHH
Confidence 34558899999999853 24689999999999999999999999999999999999999999333333443444
Q ss_pred c
Q 010820 254 N 254 (500)
Q Consensus 254 ~ 254 (500)
+
T Consensus 217 ~ 217 (231)
T PRK12347 217 K 217 (231)
T ss_pred H
Confidence 3
|
|
| >PRK06755 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-43 Score=321.64 Aligned_cols=199 Identities=20% Similarity=0.302 Sum_probs=168.7
Q ss_pred HHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCCCC
Q 010820 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPH 107 (500)
Q Consensus 28 ~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~~~ 107 (500)
-..|++|++++|.|+++||+.+++||+|+|.+++ ...|+|||||+++++|+|+||++||++|+.+.+.+.+|
T Consensus 5 ~~~~~~l~~~~~~l~~rGw~~gtsGNlSv~~~~~-----~~~~~ITpSG~~k~~L~~eDiv~vd~~g~~~~~~~~kP--- 76 (209)
T PRK06755 5 LKKWNELKDVKSELALRDWFYGTKISLSLCTSKE-----PLTFLVNVEGRDKGLFSEEDFIVVNCMCEPVFENEEKP--- 76 (209)
T ss_pred HHHHHHHHHHHHHHHHCCCCccCCCCeEEEecCC-----CcEEEEeCCCCCcccCCcccEEEEeCCCCCccCCCCCc---
Confidence 4568999999999999999999999999987543 13699999999999999999999999999884333466
Q ss_pred CCCCCCCChHHHHHHHhhCCccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCC-CCchhH
Q 010820 108 KPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYENEL 186 (500)
Q Consensus 108 ~p~~~S~e~~~H~~iy~~~~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~-~~~~~l 186 (500)
|+|+.||+.|||.++++||||+||+|++++|+.....+.+|+...++++.+++ .+..+..||++||. +++.++
T Consensus 77 -----SsE~~~H~~IY~~~~~~AVvHtHs~~at~ls~~~~~~~~i~~~~~e~~~~~g~-~~~~~~~IPiv~~~~~~~~~l 150 (209)
T PRK06755 77 -----AAESFMHADIYKKSSAECILQVQTVDSHLISELYGEEGEVTFDKRSVERVFGK-EGITEMTIPIVEDEKKFADLL 150 (209)
T ss_pred -----CccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHhhccCCcccccchHHHHHhcc-cCCCceEEEEEeCCCchhHHH
Confidence 99999999999988999999999999999999832223466566778777643 23333359999986 477888
Q ss_pred HHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 010820 187 TDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLD 243 (500)
Q Consensus 187 ~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~ 243 (500)
++.+.+.+++ .++|||+|||+++||+|+++|+.++|.+|++|++++.+++++..
T Consensus 151 a~~~~~~~~~---~~avLl~~HGv~~~G~~l~eA~~~~E~lE~l~~~~~~~~~l~~~ 204 (209)
T PRK06755 151 ENNVPNFIEG---GGVVLVHNYGMIVWGKTPEEAKKWLEGIEYLMNYHVKLLMIKGA 204 (209)
T ss_pred HHHHHhhccC---CCEEEEcCCCeEEEcCCHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 8888888865 49999999999999999999999999999999999999887654
|
|
| >PRK08130 putative aldolase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-43 Score=329.52 Aligned_cols=202 Identities=24% Similarity=0.370 Sum_probs=171.1
Q ss_pred ccHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCC
Q 010820 25 RAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKP 104 (500)
Q Consensus 25 ~~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p 104 (500)
|.++++|++|+++||.++++||+.+++||||+|++++ .|||||||.++++|+++||++||++|++++|. +|
T Consensus 1 ~~~~~~~~~l~~~~~~l~~~gl~~~~~GNiS~R~~~~-------~~lItpsG~~~~~l~~~div~vd~~g~~~~g~--~p 71 (213)
T PRK08130 1 MTEQALREEIVRLGRSLFQRGYTVGSAGNISARLDDG-------GWLVTPTGSCLGRLDPARLSKVDADGNWLSGD--KP 71 (213)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCC-------CEEEeCCCCCccCCCHhHEEEECCCCCCCCCC--CC
Confidence 4578899999999999999999999999999999874 79999999999999999999999999999874 56
Q ss_pred CCCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCC--CcccccchhhHhhhhcCCcccCcceeeeeeC-C
Q 010820 105 YPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPM--SKEFRITHMEMIKGIKGHGYYDELVVPIIEN-T 180 (500)
Q Consensus 105 ~~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~-~ 180 (500)
|+|+.+|+.||+.| |++||+|+||+|+++||+.+.. ...++....+....+ | .||++|| .
T Consensus 72 --------s~E~~~H~~iy~~rpdv~avvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~~-g-------~i~v~~y~~ 135 (213)
T PRK08130 72 --------SKEVPLHRAIYRNNPECGAVVHLHSTHLTALSCLGGLDPTNVLPPFTPYYVMRV-G-------HVPLIPYYR 135 (213)
T ss_pred --------ChhHHHHHHHHHhCCCCCEEEECCcHHHHHHHhcCccccccCCCCCChhhhhcc-C-------ccceECCCC
Confidence 89999999999999 9999999999999999998631 012332222222222 2 3999998 5
Q ss_pred CCchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccccc
Q 010820 181 AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFK 256 (500)
Q Consensus 181 ~~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~ 256 (500)
|++.++++.+++.++++ ++|||+|||+++||+|+++|+.+++++|++|++++.++..+ +..+ ++++++++.
T Consensus 136 ~g~~~la~~~~~~l~~~---~~vll~nHGvi~~G~s~~~A~~~~e~lE~~a~~~~~a~~~~-~~~l-~~~~~~~~~ 206 (213)
T PRK08130 136 PGDPAIAEALAGLAARY---RAVLLANHGPVVWGSSLEAAVNATEELEETAKLILLLGGRP-PRYL-TDEEIAELR 206 (213)
T ss_pred CChHHHHHHHHHHhccC---CEEEEcCCCCeeeCCCHHHHHHHHHHHHHHHHHHHHhcCCC-CCCC-CHHHHHHHH
Confidence 79999999999999975 99999999999999999999999999999999999998653 4555 444665543
|
|
| >PRK06557 L-ribulose-5-phosphate 4-epimerase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-43 Score=330.98 Aligned_cols=202 Identities=21% Similarity=0.334 Sum_probs=173.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCCC
Q 010820 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYP 106 (500)
Q Consensus 27 ~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~~ 106 (500)
.+++|++|+++||.|+++||+.+++||||+|++++ +.|||||||.++++++++||++||++|++++|. .+|
T Consensus 8 ~~~~~~~l~~~~r~l~~~Gl~~~~~GNiS~R~~~~------~~~~ItpsG~~~~~l~~~div~vd~~G~~~~g~-~~p-- 78 (221)
T PRK06557 8 VEKLREEVCKLHLELPKYGLVVWTSGNVSARDPGT------DLVVIKPSGVSYDDLTPEDMVVVDLDGNVVEGD-LKP-- 78 (221)
T ss_pred HHHHHHHHHHHHHHHHHCCCccccCceEEEEeCCC------CEEEEeCCCCChhhCCHHHEEEEcCCCCCcCCC-CCC--
Confidence 67799999999999999999999999999999763 489999999999999999999999999999885 456
Q ss_pred CCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCC-CCch
Q 010820 107 HKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYEN 184 (500)
Q Consensus 107 ~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~-~~~~ 184 (500)
|+|+.||+.|||.| |++||+|+||+|+++||+.+. ++|.........+.+ .||+++|. +++.
T Consensus 79 ------s~E~~lH~~iy~~~pdv~aVvH~H~~~~~a~a~~~~---~~p~~~~~~~~~~~~-------~ip~~~y~~~g~~ 142 (221)
T PRK06557 79 ------SSDTASHLYVYRHMPDVGGVVHTHSTYATAWAARGE---PIPCVLTAMADEFGG-------PIPVGPFALIGDE 142 (221)
T ss_pred ------CccHHHHHHHHHhCCCCCEEEeeCcHHHHHHHHhCC---CCChhHHHHHHHhCC-------CeeccCCcCCCcH
Confidence 89999999999999 999999999999999999975 344322222222222 39999995 5899
Q ss_pred hHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccc
Q 010820 185 ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNF 255 (500)
Q Consensus 185 ~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~ 255 (500)
++++.+++.|.. ++.+++||+|||+++||+|+++|+.+++++|++|++++.++++|.+..++++ +++++
T Consensus 143 ela~~i~~~l~~-~~~~~vll~nHG~~~~G~~~~eA~~~~e~lE~~a~~~~~a~~~G~~~~l~~~-~~~~~ 211 (221)
T PRK06557 143 AIGKGIVETLKG-GRSPAVLMQNHGVFTIGKDAEDAVKAAVMVEEVARTVHIARQLGEPIPIPQE-EIDRL 211 (221)
T ss_pred HHHHHHHHHhCc-CCCCEEEECCCCceEEcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHH-HHHHH
Confidence 999999999931 2359999999999999999999999999999999999999999988776554 55444
|
|
| >PRK06754 mtnB methylthioribulose-1-phosphate dehydratase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-43 Score=324.56 Aligned_cols=204 Identities=30% Similarity=0.494 Sum_probs=169.2
Q ss_pred cHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCC
Q 010820 26 AVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPY 105 (500)
Q Consensus 26 ~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~ 105 (500)
..+.++++|+++||+++++||+.+++||||+|++++ ...|||||||.++++|+++||++||.+|+.++|.+.+|
T Consensus 3 ~~~~~~~~l~~~~r~l~~~Gl~~g~~GNiSvR~~~~-----~~~~lITpSG~~~~~l~~~div~vd~~g~~~~~~~~kP- 76 (208)
T PRK06754 3 QLQRRWNELAEIKKELAARDWFPATSGNLSIKVSDD-----PLTFLVTASGKDKRKTTPEDFLLVDHDGKPVEETELKP- 76 (208)
T ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCEEEEEeCCC-----CCEEEEeCCCCCcccCCHHHEEEEcCCCCCCCCCCCCC-
Confidence 356789999999999999999999999999999763 12699999999999999999999999999998654466
Q ss_pred CCCCCCCCCChHHHHHHHhhCCccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCCCCchh
Q 010820 106 PHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENE 185 (500)
Q Consensus 106 ~~~p~~~S~e~~~H~~iy~~~~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~~~~~~ 185 (500)
|+|+.||+.|||..|++||||+||+|++++|+.......+++...+++..++.........||++++.+++++
T Consensus 77 -------SsE~~lH~~iY~~pdv~aViHtH~~~at~~s~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~vpv~~~~~~~~e 149 (208)
T PRK06754 77 -------SAETLLHTHIYNNTNAGCVLHVHTVDNNVISELYGDDGAVTFQGQEIIKALGIWEENAEIHIPIIENHADIPT 149 (208)
T ss_pred -------CccHHHHHHHHhCCCCeEEEEeCCHHHHHHHhhcCCCCeeeecChhhhhccCccccCceEEEEEecCCCCHHH
Confidence 9999999999986699999999999999999986422345544445544331100001124899987678999
Q ss_pred HHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 010820 186 LTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDW 244 (500)
Q Consensus 186 l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~ 244 (500)
|++.+.++|+. +.+++||+|||+++||+|+.+|+.++|.+|++|++++.+++++.+.
T Consensus 150 La~~v~~~l~~--~~~avLl~nHG~v~~G~~l~~A~~~~E~lE~~a~~~~~~~~~~~~~ 206 (208)
T PRK06754 150 LAEEFAKHIQG--DSGAVLIRNHGITVWGRDAFEAKKHLEAYEFLFSYHIKLLSIQGGV 206 (208)
T ss_pred HHHHHHHHhcc--CCcEEEECCCceEEEeCCHHHHHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 99999999982 2599999999999999999999999999999999999999887653
|
|
| >PRK13145 araD L-ribulose-5-phosphate 4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-43 Score=331.12 Aligned_cols=205 Identities=20% Similarity=0.298 Sum_probs=169.4
Q ss_pred ccHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCC
Q 010820 25 RAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKP 104 (500)
Q Consensus 25 ~~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p 104 (500)
|..+++|++|+++||+|+++||+.+++||||+|.+++ +.|||||||.++++|+++||++||++|++++|. .+|
T Consensus 1 ~~~~~~r~~l~~~~r~l~~~gl~~g~~GNiS~r~~~~------~~~~ItPsg~~~~~l~~~div~vd~~G~~~eG~-~kP 73 (234)
T PRK13145 1 KNLQEMRERVCAANKSLPKHGLVKFTWGNVSEVCREL------GRIVIKPSGVDYDELTPENMVVTDLDGNVVEGD-LNP 73 (234)
T ss_pred CcHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEecCC------CEEEEeCCCCCcccCCHHHEEEECCCCCCcCCC-CCc
Confidence 4477899999999999999999999999999998763 489999999999999999999999999999986 456
Q ss_pred CCCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCC---
Q 010820 105 YPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT--- 180 (500)
Q Consensus 105 ~~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~--- 180 (500)
|+|+.||..|||.| |++||||+||+|+++||+++. ++|.........+.| .||+.+|.
T Consensus 74 --------SsE~~lH~~IY~~rpdv~AVvHtH~~~ata~a~~~~---~lp~~~~~~~~~~~g-------~vp~~~~~~~~ 135 (234)
T PRK13145 74 --------SSDLPTHVELYKAWPEVGGIVHTHSTEAVGWAQAGR---DIPFYGTTHADYFYG-------PIPCARSLTKD 135 (234)
T ss_pred --------cccHHHHHHHHHhCCCCCEEEeCCCHHHHHHHHcCC---CCCCchhHHHHHhCC-------CcccccccCcc
Confidence 89999999999999 999999999999999999975 344321111112323 38888763
Q ss_pred ----CCchhHHHHHHHHHhhCC----CccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCCCCCC
Q 010820 181 ----AYENELTDSLAKAIDAYP----KATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLG-LDWSTPNHGP 251 (500)
Q Consensus 181 ----~~~~~l~~~v~~~l~~~~----~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g-~~~~~~~~~~ 251 (500)
+...++++.+++++++.+ +.+++||+|||++++|+|+++||.+++++|++|++++.++++| .+.++|++ .
T Consensus 136 ~~~~~~~~~~~~~va~~l~~~~~~~~~~~avLL~nHG~v~~G~~l~eA~~~~e~lE~~A~~~~~a~~lg~~~~~~~~~-~ 214 (234)
T PRK13145 136 EVNGAYEKETGSVIIEEFEKRGLDPMAVPGIVVRNHGPFTWGKNPEQAVYHSVVLEEVAKMNRLTEQINPRVEPAPQY-I 214 (234)
T ss_pred ccccccchhhHHHHHHHHhhhccccccCCEEEEcCCCeeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHH-H
Confidence 235577889999998631 2479999999999999999999999999999999999999999 44444443 4
Q ss_pred cccc
Q 010820 252 TRNF 255 (500)
Q Consensus 252 ~~~~ 255 (500)
++++
T Consensus 215 ~~~~ 218 (234)
T PRK13145 215 MDKH 218 (234)
T ss_pred HHHH
Confidence 4433
|
|
| >PRK06486 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-43 Score=336.75 Aligned_cols=208 Identities=17% Similarity=0.210 Sum_probs=177.4
Q ss_pred HhhccHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCC
Q 010820 22 LEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPS 101 (500)
Q Consensus 22 ~~~~~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~ 101 (500)
..+-+++++|++|+++||.++++||+.+++||||+|++++ .+.|||||||.++++|+++||++||++|++++|.
T Consensus 19 ~~~~~~~~~r~~l~~~~r~l~~~Gl~~gt~GNiSvR~~~~-----~~~~lITPsG~~~~~lt~eDlv~vd~dG~~veg~- 92 (262)
T PRK06486 19 LDSDAVAQARVDLAACFRAAARHGLEEGICNHFSAVLPGH-----DDLFLVNPYGYAFSEITASDLLICDFDGNVLAGR- 92 (262)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHcCCccccCceEEEEecCC-----CCEEEEcCCCCCcccCcHHHeEEECCCCCCcCCC-
Confidence 3444578899999999999999999999999999999752 1479999999999999999999999999999986
Q ss_pred CCCCCCCCCCCC-CChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeee-
Q 010820 102 PKPYPHKPPKCS-DCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIE- 178 (500)
Q Consensus 102 ~~p~~~~p~~~S-~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~- 178 (500)
.+| | +|+.||+.|||+| |++||||+||+|+++||+... .++++..+++.+.+ | .||+++
T Consensus 93 ~kP--------s~~e~~lH~~IYr~rpDv~aVvHtHs~~a~a~s~~~~--~~l~~~~~~~~~~~-g-------~i~~~~~ 154 (262)
T PRK06486 93 GEP--------EATAFFIHARIHRAIPRAKAAFHTHMPYATALSLTEG--RPLTTLGQTALKFY-G-------RTAVDED 154 (262)
T ss_pred CCC--------ChhHHHHHHHHHHhCCCCCEEEEeCChHHhhhhhcCC--CCCCcccHHHHHHC-C-------CeeeccC
Confidence 356 6 4699999999999 999999999999999999842 24555555554322 3 277776
Q ss_pred C--CCCchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccccc
Q 010820 179 N--TAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFK 256 (500)
Q Consensus 179 ~--~~~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~ 256 (500)
| .+++.++++.++++|+++ ++|||+|||+++||+|+++||.+++++|++|++++.++++|.+...++++.++++.
T Consensus 155 ~~~~~~s~ela~~va~al~~~---~avLL~nHG~v~~G~~l~eA~~~~~~lE~~a~i~~~a~~~G~~~~~~~~~~~~~~~ 231 (262)
T PRK06486 155 YNGLALDAAEGDRIARAMGDA---DIVFLKNHGVMVCGPRIAEAWDDLYYLERACEVQVLAMSTGRPLVPVDPAIAAAVA 231 (262)
T ss_pred CCCccCchhHHHHHHHHhCcC---CEEEECCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 3 246889999999999974 99999999999999999999999999999999999999999876666776777765
|
|
| >PRK09220 methylthioribulose-1-phosphate dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-42 Score=319.92 Aligned_cols=201 Identities=24% Similarity=0.441 Sum_probs=173.0
Q ss_pred ccHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCC
Q 010820 25 RAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKP 104 (500)
Q Consensus 25 ~~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p 104 (500)
|..++.+++|++++|+|+++||+.+++||||+|++++ .|||||||.++++|+++||++||++|++++|. .+|
T Consensus 1 ~~~~~~~~~l~~~~r~l~~~Gl~~~~~GNiSvr~~~~-------~~lItpsG~~~~~l~~~di~~vd~~g~~~~~~-~~P 72 (204)
T PRK09220 1 MTLEELLQQLIAAGRWIGARGWVPATSGNMSVRLDEQ-------HCAITVSGKDKGSLTAEDFLQVDIAGNAVPSG-RKP 72 (204)
T ss_pred CcHHHHHHHHHHHHHHHHHCCCCCCCCceEEEEcCCC-------EEEEECCCCChhHCChhhEEEEcCCCCCCCCC-CCc
Confidence 5678899999999999999999999999999999763 89999999999999999999999999999865 356
Q ss_pred CCCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCccc-CcceeeeeeCCCC
Q 010820 105 YPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYY-DELVVPIIENTAY 182 (500)
Q Consensus 105 ~~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~vp~~~~~~~ 182 (500)
|+|+.||+.|||+| |++||+|+||+|++++|+.... ..++...+++.+.++|.++. ....||+++..++
T Consensus 73 --------s~E~~lH~~iy~~rpdv~aViH~H~~~~~a~s~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~vp~~~~~~~ 143 (204)
T PRK09220 73 --------SAETLLHTQLYRLFPEIGAVLHTHSVNATVLSRVEKS-DALVLEGYELQKAFAGQTTHETAVVVPIFDNDQD 143 (204)
T ss_pred --------ChhHHHHHHHHHhCCCCcEEEecCcHHHHHHHhhcCC-CeeeecChhHHHHhCCCcccCCeeEEeeecCCCC
Confidence 89999999999999 9999999999999999998642 33665666666555543221 1124787766567
Q ss_pred chhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 010820 183 ENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGL 242 (500)
Q Consensus 183 ~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~ 242 (500)
+.++++.++++|++++..+++||+|||+++||+|+++||.++|.+|+.|++.+.+++++.
T Consensus 144 ~~eLa~~v~~~l~~~~~~~avlL~nHGvi~~G~~~~eA~~~~e~lE~~~~~~~~~~~~~~ 203 (204)
T PRK09220 144 IARLAARVAPYLDAQPLRYGYLIRGHGLYCWGRDMAEARRHLEGLEFLFECELERRLLEA 203 (204)
T ss_pred HHHHHHHHHHHHHhCCCCcEEEECCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 899999999999986545699999999999999999999999999999999999988763
|
|
| >PRK06661 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-43 Score=328.89 Aligned_cols=201 Identities=14% Similarity=0.151 Sum_probs=170.5
Q ss_pred HHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCCCCC
Q 010820 29 ETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHK 108 (500)
Q Consensus 29 ~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~~~~ 108 (500)
++|++|+++||.|+++||+.+++||||+|++++ +.|||||||.++++|+++||++||++|++++|.. +|
T Consensus 2 ~~r~~l~~a~r~l~~~Gl~~g~~GNiS~R~~~~------~~~lItPsG~~~~~l~~~div~vd~dG~~~~g~~-~~---- 70 (231)
T PRK06661 2 DIKYNLAAAYRIMAYLSLDDHTYTHLSARPKNA------DFYYIYPFGLRFEEVTTENLLKVSLDGQILEGEE-YQ---- 70 (231)
T ss_pred cHHHHHHHHHHHHHHcCCcccCCceEEEEeCCC------CEEEEeCCCCChhhCcHHHeEEECCCCCCcCCCC-CC----
Confidence 468999999999999999999999999998663 4899999999999999999999999999999853 22
Q ss_pred CCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCC-CCc--h
Q 010820 109 PPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYE--N 184 (500)
Q Consensus 109 p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~-~~~--~ 184 (500)
.+|+|+.||+.|||.| |++||||+||+|++++|+.+... .|+.+..+. +.| .||+.+|. +.. .
T Consensus 71 --~~sse~~lH~~IY~~rpdv~aVvH~H~~~a~a~s~~~~~~--~p~~~~~~~--~~~-------~i~~~~~~~~~~~~~ 137 (231)
T PRK06661 71 --YNKTGYFIHGSIYKTRPDISAIFHYHTPASIAVSALKCGL--LPISQWALH--FYD-------RISYHNYNSLALDAD 137 (231)
T ss_pred --CChhHHHHHHHHHHcCCCCCEEEEECChHHHHHHhcCCCC--CCccHhHHH--HcC-------CceecCCCccccCch
Confidence 0167999999999999 99999999999999999997532 233333221 222 28888764 344 6
Q ss_pred hHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCCCCCccccc
Q 010820 185 ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL-GLDWSTPNHGPTRNFK 256 (500)
Q Consensus 185 ~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~-g~~~~~~~~~~~~~~~ 256 (500)
+.++.++++++++ +++||+|||+++||+|+++||.+++++|++|++++.++++ |.+..+++++.+++.+
T Consensus 138 ~~~~~~a~~l~~~---~avll~nHG~v~~G~sl~eA~~~~~~lE~~a~~~~~a~~~~g~~~~l~~~~~~~~~~ 207 (231)
T PRK06661 138 KQSSRLVNDLKQN---YVMLLRNHGAITCGKTIHEAMFYTYHLEQACKTQCLLNSTKKQELIIPSVEICKKTV 207 (231)
T ss_pred hHHHHHHHHhCCC---CEEEECCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence 7899999999874 9999999999999999999999999999999999999999 8888888887766655
|
|
| >TIGR01086 fucA L-fuculose phosphate aldolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=325.72 Aligned_cols=197 Identities=19% Similarity=0.202 Sum_probs=171.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCCC
Q 010820 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYP 106 (500)
Q Consensus 27 ~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~~ 106 (500)
+.++|++|+++||.|+++||+.+++||||+|+++ .|||||||+++++|+++||++||++|++++|. +|
T Consensus 2 ~~~~~~~i~~~~~~l~~~Gl~~g~~GNiS~R~~~--------~~lItPsG~~~~~l~~~div~vd~~G~~~~g~--kp-- 69 (214)
T TIGR01086 2 RRELSQRIIDTCLEMTTLGLNQGTAGNVSVRRYQ--------GMLITPTGGPYYEKLTESIVYVIDGGGKEEEK--LP-- 69 (214)
T ss_pred hHHHHHHHHHHHHHHHHcCCCCCCcceEEEECCC--------CEEEECCCCCcccCCHHHEEEEcCCCCCCCCC--CC--
Confidence 4678999999999999999999999999999876 49999999999999999999999999999873 66
Q ss_pred CCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCC-CCch
Q 010820 107 HKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYEN 184 (500)
Q Consensus 107 ~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~-~~~~ 184 (500)
|+|+.||..||+.+ |++||||+||+|++++++.+. ++|+..+++.....+ .||+++|. +++.
T Consensus 70 ------sse~~~H~~iy~~rpdv~avvH~H~~~~~~~~~~~~---~lp~~~~~~~~~~~~-------~i~~v~y~~~gs~ 133 (214)
T TIGR01086 70 ------SSEWWFHLMAYYQRRPDNAVVHNHHIVCATASILLK---RIPAIHYMVAASGGG-------NIPCVPYATFGST 133 (214)
T ss_pred ------ChhHHHHHHHHHhCCCCCEEEeCCCHHHHHHHHcCC---CCCcchHHHHHhcCC-------CccccCCCCCChH
Confidence 89999999999999 999999999999999998864 345444444432212 38999995 6899
Q ss_pred hHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCCCCCCcccc
Q 010820 185 ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGL-DWSTPNHGPTRNF 255 (500)
Q Consensus 185 ~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~-~~~~~~~~~~~~~ 255 (500)
++++.+++.++++ ++|||+|||+++||+|+++|+.+++.+|++|++++.++.+|+ +..++++ ++.+.
T Consensus 134 ~la~~v~~~~~~~---~~vLL~nHG~~~~G~~l~eA~~~~e~lE~~a~~~~~a~~~g~~~~~l~~~-~~~~~ 201 (214)
T TIGR01086 134 KLASEVVAGILKS---KAILLLHHGLIIACENLLKALWLAAEVEVLAAQYLKTLLAITDPPPLLSD-EMIVV 201 (214)
T ss_pred HHHHHHHHHhhhC---CEEehhcCCCEEecCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCHH-HHHHH
Confidence 9999999999974 899999999999999999999999999999999999998885 6666555 44433
|
Members of this family are L-fuculose phosphate aldolase from various Proteobacteria, encoded in fucose utilization operons. Homologs in other bacteria given similar annotation may share extensive sequence similarity but are not experimenally characterized and are not found in apparent fucose utilization operons; we consider their annotation as L-fuculose phosphate aldolase to be tenuous. This model has been narrowed in scope from the previous version. |
| >PRK07090 class II aldolase/adducin domain protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=332.27 Aligned_cols=215 Identities=18% Similarity=0.229 Sum_probs=174.5
Q ss_pred hhhHHHHhhc---cHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeC
Q 010820 16 THTQAYLEGR---AVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSG 92 (500)
Q Consensus 16 ~~~~~~~~~~---~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~ 92 (500)
++++++++.. +++.+|++|+++||.++++||+.+++||||+|++++ +.|||||||.++++|+++||++||+
T Consensus 14 ~~~~~~~~~~~~~~~~~~r~~l~~~~r~l~~~Gl~~g~~GNiS~R~~~~------~~~lItPsG~~~~~lt~~Div~vd~ 87 (260)
T PRK07090 14 ARAQRQMDNELKDSGWTLRQKLALTCRILFDAGHDSGLAGQITARAEAP------GTYYTQRLGLGFDEITASNLLLVDE 87 (260)
T ss_pred HHHHHHHhhhcCHHHHHHHHHHHHHHHHHHHcCCcccCCceEEEEeCCC------CEEEEeCCCCChhhCCHHHeEEECC
Confidence 3455564432 367889999999999999999999999999999763 4799999999999999999999999
Q ss_pred CCCcccCCCCCCCCCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcC-CcccC
Q 010820 93 NGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKG-HGYYD 170 (500)
Q Consensus 93 ~g~~~~g~~~~p~~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g-~~~~~ 170 (500)
+|++++|. .+| |+|+.||+.|||.| |++||+|+||||+++||+.+. +++..++.... +.+ ..+++
T Consensus 88 dG~~v~G~-~kP--------s~E~~lH~~IYr~rPDv~AVvHtH~p~ata~s~~~~---~l~~~~~~~~~-~~~~~~~~~ 154 (260)
T PRK07090 88 DLNVLDGE-GMP--------NPANRFHSWIYRARPDVNCIIHTHPPHVAALSMLEV---PLVVSHMDTCP-LYDDCAFLK 154 (260)
T ss_pred CCCCCCCC-CCC--------ChhHHHHHHHHHhCCCCCEEEEeCCHHHHHHHhcCC---CCCccchhHHh-hccceeecc
Confidence 99999986 356 89999999999999 999999999999999999874 34432222111 111 11111
Q ss_pred cceeeeeeCCCCchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 010820 171 ELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHG 250 (500)
Q Consensus 171 ~~~vp~~~~~~~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~ 250 (500)
.+|.+ |.+.++++.++++|+++ +++||+|||++++|+|+++||.+++++|++|++++.++++|.+..+++ +
T Consensus 155 --~~~~i---p~~~~~a~~va~~l~~~---~avLL~nHGvi~~G~~l~eA~~~~~~LE~~A~i~l~a~~~G~~~~l~~-e 225 (260)
T PRK07090 155 --DWPGV---PVGNEEGEIISAALGDK---RAILLSHHGQLVAGKSIEEACVLALLIERAARLQLLAMAAGPIKPIPP-E 225 (260)
T ss_pred --CcCCc---CCChHHHHHHHHHhccC---CEEEECCCCCeEEcCCHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCH-H
Confidence 12332 33456799999999974 899999999999999999999999999999999999999998777655 5
Q ss_pred Cccccccc
Q 010820 251 PTRNFKLG 258 (500)
Q Consensus 251 ~~~~~~~~ 258 (500)
+++++...
T Consensus 226 ~~~~~~~~ 233 (260)
T PRK07090 226 LAREAHDW 233 (260)
T ss_pred HHHHHHHh
Confidence 77777643
|
|
| >PRK06357 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-42 Score=321.20 Aligned_cols=193 Identities=18% Similarity=0.256 Sum_probs=163.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCC---cCCCCCCCEEEEe-CCCCcccCCCC
Q 010820 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQ---KERMEPEDMYVLS-GNGTTLSSPSP 102 (500)
Q Consensus 27 ~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~---~~~l~~~di~~vd-~~g~~~~g~~~ 102 (500)
.+++|++|+++||+++++||+.+++||||+|+++. ...+.|||||||++ +++|+++||++|| .+|++++|. .
T Consensus 3 ~~~~r~~l~~~~r~l~~~Gl~~gt~GNiS~R~~~~---~~~~~~~ITpsg~~g~~~~~lt~~Div~vd~~~g~~~~g~-~ 78 (216)
T PRK06357 3 FQKEREDLAKVVKTMFDRKETNAAGGNISVRMTAE---KNKEYIIMTPTLMSEAKLCDLSPYQILVVDLNTGEVIEGV-G 78 (216)
T ss_pred hHHHHHHHHHHHHHHHHcCCCccCCCEEEEEeccc---CCCCeEEEeCCCCCccccccCCHHHEEEEecCCCeEcCCC-C
Confidence 67789999999999999999999999999999420 00248999999875 9999999999999 589999986 3
Q ss_pred CCCCCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCC-
Q 010820 103 KPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT- 180 (500)
Q Consensus 103 ~p~~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~- 180 (500)
+| |+|+.||+.||+.| |++||||+||+|+++|++.+.+ +|.... ....+ | .||++||.
T Consensus 79 kP--------SsE~~lH~~IY~~rpdv~aVvH~H~~~ata~a~~~~~---lp~~~~-~~~~~-g-------~i~~~p~~~ 138 (216)
T PRK06357 79 RV--------TREINMHEAAYVANPKIKCVYHSHAKESMFWATLGLE---MPNLTE-ATQKL-G-------KIPTLPFAP 138 (216)
T ss_pred CC--------ChhHHHHHHHHHhCCCCCEEEecCcHHHHHHHHcCCC---CCCccH-HHHhc-C-------CcceecccC
Confidence 56 99999999999999 9999999999999999988643 443222 22222 3 38999985
Q ss_pred CCchhHHHHHHHHHhhCCC---ccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 010820 181 AYENELTDSLAKAIDAYPK---ATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLD 243 (500)
Q Consensus 181 ~~~~~l~~~v~~~l~~~~~---~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~ 243 (500)
+++.++++.+++++++.++ .+++||+|||+++||+|+.+||.++|++|++|++++.+++++..
T Consensus 139 ~gs~ela~~v~~~l~~~~~~~~~~~vLl~nHGvv~~G~~l~eA~~~~e~lE~~a~i~~~a~~l~~~ 204 (216)
T PRK06357 139 ATSPELAEIVRKHLIELGDKAVPSAFLLNSHGIVITDTSLHKAYDILETIEWNAYIAYQATVFDKL 204 (216)
T ss_pred CCcHHHHHHHHHHHhhcCcccCCCEEEECCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 6899999999999986321 27999999999999999999999999999999999999998853
|
|
| >PRK06208 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=332.89 Aligned_cols=204 Identities=16% Similarity=0.207 Sum_probs=172.9
Q ss_pred cHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCC
Q 010820 26 AVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPY 105 (500)
Q Consensus 26 ~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~ 105 (500)
+.+.+|++|++++|.|+++||+.+++||||+|++++ .+.|||||||.++++|+++||++||++|++++|. +|+
T Consensus 39 ~~~~~~~~l~~~~r~l~~~Gl~~g~~GNIS~R~~~~-----~~~~lITPsG~~~~~lt~eDiv~vd~dG~~v~G~--~ps 111 (274)
T PRK06208 39 ERLHRKQRLAAAFRLFARFGFDEGLAGHITARDPEL-----PDHFWVNPLGVHFSQIKVSDLLLVDHDGEVVEGD--RPL 111 (274)
T ss_pred HHHHHHHHHHHHHHHHHHcCCccccCceEEEEccCC-----CCeEEEcCCCCChhhCcHHHeEEECCCCCCcCCC--CCC
Confidence 355679999999999999999999999999999752 2489999999999999999999999999999985 441
Q ss_pred CCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCCC---
Q 010820 106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTA--- 181 (500)
Q Consensus 106 ~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~~--- 181 (500)
.++|+.||+.||+.| |++||||+||+|+++||+.+.. ++....+.. .+.| .||++++..
T Consensus 112 ------~~sE~~lH~~IYr~rpDv~AViHtHpp~ata~s~~~~~---l~~i~~~~~-~~~~-------~ip~~~~~~g~~ 174 (274)
T PRK06208 112 ------NRAAFAIHSAIHEARPDVVAAAHTHSTYGKAWSTLGRP---LDPITQDAC-AFYE-------DHALFDDFTGVV 174 (274)
T ss_pred ------CHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHhCCC---CChhhHHHH-HHcC-------CceeccCCCCcc
Confidence 146899999999999 9999999999999999998753 333333333 2323 388876533
Q ss_pred CchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccc
Q 010820 182 YENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL 257 (500)
Q Consensus 182 ~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~ 257 (500)
++.++++.++++|+++ ++|||+|||+++||+|+++||.+++++|++|++++.++.+|.+..+ +++++++++.
T Consensus 175 ~s~ela~~va~~l~~~---~avLL~NHGvv~~G~tl~eA~~~~e~lE~aA~i~l~a~~~G~~~~L-~~e~~~~~~~ 246 (274)
T PRK06208 175 VDTSEGRRIAAALGTH---KAVILQNHGLLTVGPSVDAAAWWFIALERACQTQLLAEAAGPPQPI-DHETARHTRS 246 (274)
T ss_pred CchHHHHHHHHHhccC---CEEEECCCCceEeeCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcCC-CHHHHHHHHH
Confidence 4889999999999975 9999999999999999999999999999999999999999987765 4557777764
|
|
| >PRK07044 aldolase II superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-42 Score=330.88 Aligned_cols=208 Identities=16% Similarity=0.219 Sum_probs=175.5
Q ss_pred hccHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCC
Q 010820 24 GRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPK 103 (500)
Q Consensus 24 ~~~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~ 103 (500)
+.+++++|++|+++||.|+++||+.+++||||+|++++ .+.|||||||.++++|+++||++||++|++++|.. +
T Consensus 11 ~~~~~~~r~~l~~~~r~l~~~Gl~~g~~GNiSvR~~~~-----~~~~lITpsG~~~~~l~~~div~vd~~g~~veg~~-~ 84 (252)
T PRK07044 11 SPAEWQARVDLAAAYRLVALLGWDDLIYTHISARVPGE-----EHHFLINPYGLLFDEITASNLVKIDLDGNVVDDSP-Y 84 (252)
T ss_pred CHHHHHHHHHHHHHHHHHHHcCCccccCcEEEEEccCC-----CCeEEEcCCCCChhhcCHHHeEEECCCCCCcCCCC-C
Confidence 44488999999999999999999999999999999752 24799999999999999999999999999998752 2
Q ss_pred CCCCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCC--
Q 010820 104 PYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-- 180 (500)
Q Consensus 104 p~~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~-- 180 (500)
| ..++|+.||+.||+.| |++||||+||+|+++||+..... .|+.+. ... +.| .||+.+|.
T Consensus 85 ~------~~pse~~lH~~iY~~rpdv~aViHtH~~~a~a~s~~~~~~--~p~~~~-~~~-~~g-------~i~~~~y~~~ 147 (252)
T PRK07044 85 P------VNPAGFTIHSAIHAARPDAHCVMHTHTTAGVAVSAQRDGL--LPLSQH-ALQ-FYG-------RLAYHDYEGI 147 (252)
T ss_pred C------CChHHhHHHHHHHHhCCCCcEEEEECCHHHHHHHHhCCCC--CcchHh-HHH-HcC-------CceeeCCCCC
Confidence 2 1146999999999999 99999999999999999986432 233333 222 223 28888885
Q ss_pred CCchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccc
Q 010820 181 AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL 257 (500)
Q Consensus 181 ~~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~ 257 (500)
+.+.++++.+++.|++ .++|||+|||+++||+|+++|+.+++++|++|++++.++++|.+..+++++..++.+.
T Consensus 148 ~~~~e~~~~va~~l~~---~~avLL~nHGvi~~G~~l~eA~~~~e~lE~~a~~~~~a~~lG~~~~~~~~~~~~~~~~ 221 (252)
T PRK07044 148 ALDLDEGERLVADLGD---KPAMLLRNHGLLTVGRTVAEAFLLMYTLERACEIQVAAQAGGGELVLPPPEVAERTAR 221 (252)
T ss_pred cCCHHHHHHHHHHhcc---CCEEEECCCCceEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 3478889999999987 4999999999999999999999999999999999999999998877777767777664
|
|
| >PRK08333 L-fuculose phosphate aldolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-42 Score=313.69 Aligned_cols=179 Identities=25% Similarity=0.344 Sum_probs=158.6
Q ss_pred HHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCCCC
Q 010820 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPH 107 (500)
Q Consensus 28 ~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~~~ 107 (500)
.++|++|++++|+++++||+.+++||||+|+++ .|||||||.++++++++||++||++|+.++|. +|
T Consensus 2 ~~~~~~l~~~~~~~~~~gl~~~~~GNiS~R~~~--------~~lItpsG~~~~~l~~~di~~vd~~g~~~~g~--~P--- 68 (184)
T PRK08333 2 RNVKAQLVKYSKLAHERGLTAAFGGNLSIRVGN--------LVFIKATGSVMDELTREQVAVIDLNGNQLSSV--RP--- 68 (184)
T ss_pred hHHHHHHHHHHHHHHHCCCCcCCCCeEEEEeCC--------EEEEeCCCCCcccCCHHHEEEECCCCCCCCCC--CC---
Confidence 468999999999999999999999999999975 79999999999999999999999999999873 56
Q ss_pred CCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHH-hhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCC-CCch
Q 010820 108 KPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVT-MINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYEN 184 (500)
Q Consensus 108 ~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~-~~~~ 184 (500)
|+|+.+|..|||+| |++||+|+||+|++++| +.+. ++|....+... +.| .||++||. +++.
T Consensus 69 -----s~e~~lH~~iyr~rpdv~aViHtH~~~a~a~s~~~~~---~~p~~~~~~~~-~~~-------~v~v~~~~~~g~~ 132 (184)
T PRK08333 69 -----SSEYRLHLAVYRNRPDVRAIAHLHPPYSIVASTLLEE---ELPIITPEAEL-YLK-------KIPILPFRPAGSV 132 (184)
T ss_pred -----ChhHHHHHHHHHhCCCCCEEEeCCcHHHHHHHHHcCC---CCCCccHHHHH-hCC-------CEeeecCCCCCcH
Confidence 89999999999999 99999999999999999 6553 34433333322 222 39999996 5999
Q ss_pred hHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHH
Q 010820 185 ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLH 238 (500)
Q Consensus 185 ~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~ 238 (500)
++++.++++|+++ +++||+|||+++||+|+++|+.+++.+|++|++++.+.
T Consensus 133 ~la~~~~~~l~~~---~~vll~nHGv~~~G~~~~eA~~~~e~lE~~A~~~~~~~ 183 (184)
T PRK08333 133 ELAEQVAEAMKEY---DAVIMERHGIVTVGRSLREAFYKAELVEESAKLWYLKF 183 (184)
T ss_pred HHHHHHHHHhccC---CEEEEcCCCCEEEcCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999974 99999999999999999999999999999999998875
|
|
| >TIGR03328 salvage_mtnB methylthioribulose-1-phosphate dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=313.74 Aligned_cols=190 Identities=37% Similarity=0.721 Sum_probs=165.8
Q ss_pred HHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCCCCCCCCCC
Q 010820 34 ISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCS 113 (500)
Q Consensus 34 l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~~~~p~~~S 113 (500)
|++++|+|+++||+.+++||||+|++++ .|||||||.++++++++||++||++|++++|. .+| |
T Consensus 1 i~~~~r~l~~~Gl~~~~~GniS~r~~~~-------~~lItpsg~~~~~l~~~di~~v~~~g~~~~g~-~~p--------s 64 (193)
T TIGR03328 1 LIEAGRDLYKRGWVPGTGGNLSARLDED-------EILITPSGVDKGRLTPEDFLVVDLQGKPVSGG-LKP--------S 64 (193)
T ss_pred CHHHHHHHHHcCCCccCCCEEEEEcCCC-------EEEEeCCCCChhhCCcceEEEEcCCCCCCCCC-CCC--------C
Confidence 4789999999999999999999999764 79999999999999999999999999999875 355 8
Q ss_pred CChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCccc-CcceeeeeeCCCCchhHHHHHH
Q 010820 114 DCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYY-DELVVPIIENTAYENELTDSLA 191 (500)
Q Consensus 114 ~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~vp~~~~~~~~~~l~~~v~ 191 (500)
+|+.+|+.|||+| |++||+|+||+|++++|+.......++...+++++.++|...+ +...||++++.+++.++++.++
T Consensus 65 ~e~~~H~~iy~~~pdv~aVvH~H~~~a~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~vp~~~~~~gs~ela~~~~ 144 (193)
T TIGR03328 65 AETLLHTQLYRLTPGAGAVLHTHSVEATVLSRLYPSNGAFELEGYEMLKALPGITTHEDKLTIPIFENTQDIARLADSVA 144 (193)
T ss_pred cHHHHHHHHHHhCCCCeEEEEcCCHHHHHHHhhcccCCeeeccchhhhhhhCCCcCCCCceEEeeecCCCChHHHHHHHH
Confidence 9999999999999 9999999999999999998543234666777776654442212 2224999999889999999999
Q ss_pred HHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHh
Q 010820 192 KAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQ 239 (500)
Q Consensus 192 ~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~ 239 (500)
++|+++++.+++||+|||+++||+|+++|+.++|.+|++|++.+.++.
T Consensus 145 ~~l~~~~~~~avll~nHGv~~~G~~~~~A~~~~e~lE~~a~~~~~~~~ 192 (193)
T TIGR03328 145 PYLEAYPDVPGVLIRGHGLYAWGRDWEEAKRHLEALEFLFECELEMLK 192 (193)
T ss_pred HHHhcCCCCCEEEEcCCcceEEcCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999865667999999999999999999999999999999999998865
|
Members of this family are the methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway. This pathway allows methylthioadenosine, left over from polyamine biosynthesis, to be recycled to methionine. |
| >PRK08660 L-fuculose phosphate aldolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-41 Score=308.41 Aligned_cols=180 Identities=18% Similarity=0.295 Sum_probs=157.1
Q ss_pred HHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCCCCCC
Q 010820 30 TRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKP 109 (500)
Q Consensus 30 ~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~~~~p 109 (500)
+|++|++++|.|+++||+.+++||||+|+++ .|||||||.++++++++||++||++|+.. +. .+|
T Consensus 1 ~~~~l~~~~~~l~~~gl~~~~~GniS~R~~~--------~~lItpsg~~~~~l~~~dlv~vd~~g~~~-~~-~~p----- 65 (181)
T PRK08660 1 MWQEFARIGKKLFAHGLVSSHFGNISVRTGD--------GLLITRTGSMLDEITEGDVIEVGIDDDGS-VD-PLA----- 65 (181)
T ss_pred CHHHHHHHHHHHHHCCCcccCCceeEEEcCC--------EEEEeCCCCCcccCChhHEEEEcCCCCcc-CC-CCC-----
Confidence 3899999999999999999999999999954 89999999999999999999999999875 33 355
Q ss_pred CCCCCChHHHHHHHhhCCccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCCCCchhHHHH
Q 010820 110 PKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDS 189 (500)
Q Consensus 110 ~~~S~e~~~H~~iy~~~~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~~~~~~l~~~ 189 (500)
|+|+.||+.|||.+|++||+|+||+|+++||+.+. ++++...+... +.| .||++...+++.++++.
T Consensus 66 ---s~E~~lH~~iy~~~dv~aVvH~H~~~~~a~s~~~~---~l~~~~~~~~~-~~~-------~ipv~~~~~~~~~la~~ 131 (181)
T PRK08660 66 ---SSETPVHRAIYRRTSAKAIVHAHPPYAVALSLLED---EIVPLDSEGLY-FLG-------TIPVVGGDIGSGELAEN 131 (181)
T ss_pred ---CccHHHHHHHHcCCCCCEEEEeCChHHHHHHHcCC---CCCCcCHHHHH-hcC-------CEeEEeCCCCCHHHHHH
Confidence 99999999999955999999999999999999864 34443343332 222 39998336799999999
Q ss_pred HHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcC
Q 010820 190 LAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLG 241 (500)
Q Consensus 190 v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g 241 (500)
++++|+++ +++||+|||+++||+|+++|+.+++.+|++|++++.+++++
T Consensus 132 v~~~l~~~---~~vll~nHG~~~~G~~i~~A~~~~e~lE~~a~i~~~~~~l~ 180 (181)
T PRK08660 132 VARALSEH---KGVVVRGHGTFAIGKTLEEAYIYTSQLEHSCKVLYLVRTAK 180 (181)
T ss_pred HHHHHhhC---CEEEEcCCCceEeCCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999974 99999999999999999999999999999999999998875
|
|
| >COG0235 AraD Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=317.36 Aligned_cols=193 Identities=29% Similarity=0.456 Sum_probs=172.1
Q ss_pred ccHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCC
Q 010820 25 RAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKP 104 (500)
Q Consensus 25 ~~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p 104 (500)
+..++.|++|++++|.|+++||+.+++||||+|+++. ..|+|||||+.|++|+++||++||+||++++|. .+|
T Consensus 3 ~~~~~~~~~l~~~~~~l~~~g~~~~t~GniS~r~~~~------~~~~ItpsG~~~~~lt~~dlv~vd~~G~~~~g~-~~p 75 (219)
T COG0235 3 MMLEKLRQELAKAARLLARRGLVEGTAGNISVRLPEG------GLFLITPSGVPFGELTADDLVVVDLDGEVVEGG-KKP 75 (219)
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCCcCCceEEEEcCCC------ceEEEeCCCCccccCcHHHeEEEeCCCcEecCC-CCC
Confidence 5688999999999999999999999999999999884 249999999999999999999999999999983 456
Q ss_pred CCCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCC-CC
Q 010820 105 YPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AY 182 (500)
Q Consensus 105 ~~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~-~~ 182 (500)
|+|+++|..|||+| |++||+||||+|+++||+.+. .+++.+++....+++ .||+.+|. ++
T Consensus 76 --------Sse~~~H~~iY~~rpd~~aVvHtHs~~a~als~~~~---~l~~~~~~~~~~~~~-------~i~~~~~~~~~ 137 (219)
T COG0235 76 --------SSETPIHLAIYRARPDAGAVVHTHSPYATALSTLGE---PLPPLGTEHLKYFGG-------GIPCAPYAGPG 137 (219)
T ss_pred --------chhHHHHHHHHHhCCCCCEEEecCcHHHHHHHHhcC---CCCCCCHHHHHHcCC-------CcccccCCCCC
Confidence 99999999999999 999999999999999999984 566666767666554 39999985 57
Q ss_pred chhHHHHHHHHHhhCCCccEEE--EccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 010820 183 ENELTDSLAKAIDAYPKATAVL--VRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWS 245 (500)
Q Consensus 183 ~~~l~~~v~~~l~~~~~~~~vl--l~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~ 245 (500)
+.+++.++++.+... ..++ |+|||+++||+|+.+|+.+++.+|++|++++.++++|.+..
T Consensus 138 ~~~~~~~~~~~~~~~---~~~~~ll~~HG~~~~G~~l~eA~~~~~~lE~~a~~~~~~~~~~~~~~ 199 (219)
T COG0235 138 SVELAEALAEAADLA---EAVLKLLRNHGVVAWGKTLAEAVHLAEVLEELAKLQLKALSLGKPLL 199 (219)
T ss_pred chhhHHHHHHHHHHH---HHHHHHHHcCCcEEECCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 888888888877763 4555 99999999999999999999999999999999999998765
|
|
| >PRK03634 rhamnulose-1-phosphate aldolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=320.49 Aligned_cols=212 Identities=15% Similarity=0.208 Sum_probs=167.6
Q ss_pred cHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCC---------------------CCccEEEEecCCCCcCCC--
Q 010820 26 AVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIP---------------------KPQQLILMSPSGVQKERM-- 82 (500)
Q Consensus 26 ~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~---------------------~~~~~~~itpsg~~~~~l-- 82 (500)
..+..+++|++++|+++++||+.+++||||+|++++++. ..+++|||||||++++++
T Consensus 5 ~~~~~~~~l~~~~~~l~~~Gl~~~~~GNiSvR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lITpSG~~~~~l~~ 84 (274)
T PRK03634 5 LDSWFVQGMIKVTSDLWLKGWDERNGGNISLRLTEEEVAPYGDDFHQQPRYIPLSQPMPELAGTYFLVTGSGKFFRNVQL 84 (274)
T ss_pred hhHHHHHHHHHHHHHHHHcCCccCCCCeEEEEcCchhhhhhhhccccccccccccccchhccCCEEEEeCCCcChhhhhc
Confidence 346689999999999999999999999999999762100 112489999999999999
Q ss_pred CCC-C--EEEEeCCCCccc---C--CCCCCCCCCCCCCCCChHHHHHHH----hh-C-CccEEEecCchHHHHHHhhcCC
Q 010820 83 EPE-D--MYVLSGNGTTLS---S--PSPKPYPHKPPKCSDCAPLFMKAY----EK-R-DAGAVIHSHGIESCLVTMINPM 148 (500)
Q Consensus 83 ~~~-d--i~~vd~~g~~~~---g--~~~~p~~~~p~~~S~e~~~H~~iy----~~-~-~~~av~H~H~~~~~a~s~~~~~ 148 (500)
+|+ | +++||.+|+.++ | .+.+| |+|+.||+.|| +. | |++||+|+||+|++++|+.+.
T Consensus 85 ~p~dd~~lv~vd~~G~~~~~~~g~~~~~kP--------SsE~~lH~~IY~~~~~~~rpdv~AVvHtHs~~atals~~~~- 155 (274)
T PRK03634 85 DPAANLGVIRIDSDGAGYHILWGLTNGGKP--------TSELPAHLMSHIARLKATNGKDRVIMHCHATNLIALTYVLE- 155 (274)
T ss_pred CchhcCCEEEEcCCCCEeeeeccCCCCCCC--------chHHHHHHHHHHHHhhccCCCCcEEEecCchHHHHHHCcCC-
Confidence 554 5 678899998753 3 12344 99999999999 45 8 999999999999999999864
Q ss_pred Cc--ccccc----hhhHhhhhcCCcccCcceeeeeeC-CCCchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHH
Q 010820 149 SK--EFRIT----HMEMIKGIKGHGYYDELVVPIIEN-TAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAK 221 (500)
Q Consensus 149 ~~--~~~~~----~~~~~~~~~g~~~~~~~~vp~~~~-~~~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~ 221 (500)
.+ .+... ..+....+++ .||++|| .+++.++++.++++|+++ ++|||+|||+++||+|+++||
T Consensus 156 l~~~~~~~~~~~~~~e~~~~~~~-------~i~vvpy~~pgs~eLa~~v~~~l~~~---~avLL~nHGvv~~G~~l~eA~ 225 (274)
T PRK03634 156 LDEAVFTRTLWEMSTECLVVFPD-------GVGIVPWMVPGTDEIGQATAEKMQKH---DLVLWPKHGVFGSGPTLDEAF 225 (274)
T ss_pred cChHhhhhhhhhcCccceeEeCC-------ceeEecCCCCCCHHHHHHHHHHhccC---CEEEEcCCCCeEecCCHHHHH
Confidence 11 11111 1111111222 3999999 569999999999999874 899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCC-CCCCCCCCCcccccc
Q 010820 222 TQAECYHYLFDAAIKLHQLGL-DWSTPNHGPTRNFKL 257 (500)
Q Consensus 222 ~~~~~lE~~a~~~~~a~~~g~-~~~~~~~~~~~~~~~ 257 (500)
.+++.+|++|++++.++++|. +..+ ++++++++..
T Consensus 226 ~~~e~lE~~a~i~l~a~~~G~~~~~l-~~e~l~~l~~ 261 (274)
T PRK03634 226 GLIDTAEKSAEIYVKVLSMGGMKQTI-TDEELIALGE 261 (274)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCC-CHHHHHHHHH
Confidence 999999999999999999996 5554 5557777653
|
|
| >TIGR02624 rhamnu_1P_ald rhamnulose-1-phosphate aldolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=317.08 Aligned_cols=210 Identities=17% Similarity=0.219 Sum_probs=168.8
Q ss_pred HHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCC--------------------CCCccEEEEecCCCCcCCCCC---
Q 010820 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSI--------------------PKPQQLILMSPSGVQKERMEP--- 84 (500)
Q Consensus 28 ~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~--------------------~~~~~~~~itpsg~~~~~l~~--- 84 (500)
+.++++|++++|.|+++||+.+++||||+|++++++ ...+++|+|||||+++++|++
T Consensus 7 ~~~~~~i~~~~~~l~~~Gl~~~~~GNiS~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lITpSG~~~~~l~~~~~ 86 (270)
T TIGR02624 7 SPFVQEMIKTTSDLWRLGWDERNGGNISLRLDEEEVAPYLDFHQVPRKIPLKFPAPELANKYFLVTGSGKFFRNVEENPA 86 (270)
T ss_pred HHHHHHHHHHHHHHHHcCCcCCCCCEEEEEcCccccchhhcccccccccccccccccccCCEEEEeCCCCCHHhcccCch
Confidence 568999999999999999999999999999975200 001248999999999999994
Q ss_pred CCE--EEEeCCCCccc------CCCCCCCCCCCCCCCCChHHHHH----HHhhC-CccEEEecCchHHHHHHhhcCCC-c
Q 010820 85 EDM--YVLSGNGTTLS------SPSPKPYPHKPPKCSDCAPLFMK----AYEKR-DAGAVIHSHGIESCLVTMINPMS-K 150 (500)
Q Consensus 85 ~di--~~vd~~g~~~~------g~~~~p~~~~p~~~S~e~~~H~~----iy~~~-~~~av~H~H~~~~~a~s~~~~~~-~ 150 (500)
+|+ ++||.+|+.++ +. .+| |+|+.||+. ||+.| |++||+|+||+|++++|+..... .
T Consensus 87 ~d~~iv~vd~~G~~~~~~~~~~~g-~kP--------SsE~~mH~~v~~~iy~~rpd~~AVvHtHp~~ata~s~~~~~~~~ 157 (270)
T TIGR02624 87 ENLGILRVSEDGASVHLLWGLTDG-GVP--------TSELPAHFMSHIARLKVDPENRVIMHCHATNLIAMTFTHELDEA 157 (270)
T ss_pred hceeEEEECCCCCEEEeeccccCC-CCc--------ChHHHHHHHHHHHHHHhCCCCCEEEccCcHHHHHHHccCcccch
Confidence 686 56899999986 32 356 999999996 68999 99999999999999999986411 1
Q ss_pred c----cccchhhHhhhhcCCcccCcceeeeeeC-CCCchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHH
Q 010820 151 E----FRITHMEMIKGIKGHGYYDELVVPIIEN-TAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAE 225 (500)
Q Consensus 151 ~----~~~~~~~~~~~~~g~~~~~~~~vp~~~~-~~~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~ 225 (500)
. ++....+....+++ .||++|| .|++.+|++.++++|+++ ++|||+|||+++||+|+++||.++|
T Consensus 158 ~~~~~l~~~~~e~~~~~~~-------~i~vvp~~~pGs~eLA~~v~~~l~~~---~avLL~nHGvva~G~~l~eA~~~~E 227 (270)
T TIGR02624 158 VFTRTLWQMCTECLVVFPD-------GVGIIPWMVPGTNEIGEATAEKMKEH---RLVLWPHHGIFGAGPSLDETFGLIE 227 (270)
T ss_pred hccccccccccchhheeCC-------ccccccCcCCCCHHHHHHHHHHhccC---CEEEEcCCCCeEecCCHHHHHHHHH
Confidence 1 11111122222322 3999999 479999999999999975 8999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCccccc
Q 010820 226 CYHYLFDAAIKLHQLGLDWSTPNHGPTRNFK 256 (500)
Q Consensus 226 ~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~ 256 (500)
.+|++|++++.++++|.+....++++++++.
T Consensus 228 ~lE~~A~i~~~a~~lg~~~~~L~~e~l~~~~ 258 (270)
T TIGR02624 228 TAEKSAEVYTKVYSQGGVKQTISDEQLIALA 258 (270)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 9999999999999999763445555777664
|
Members of this family are the enzyme RhaD, rhamnulose-1-phosphate aldolase. |
| >PF00596 Aldolase_II: Class II Aldolase and Adducin N-terminal domain; InterPro: IPR001303 This entry represents the alpha/beta/alpha domain found in class II aldolases and adducin, usually at the N terminus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-40 Score=300.82 Aligned_cols=178 Identities=34% Similarity=0.560 Sum_probs=150.8
Q ss_pred HHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCC-CCcccC-C-CCCCCCCC
Q 010820 32 VLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN-GTTLSS-P-SPKPYPHK 108 (500)
Q Consensus 32 ~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~-g~~~~g-~-~~~p~~~~ 108 (500)
++|++++|+++++||+.+++||||+|++++ .|||||||.++++++++||++||++ |++++| . ..+|
T Consensus 1 ~~l~~~~r~l~~~g~~~~~~GniS~R~~~~-------~~lit~sg~~~~~l~~~d~~~v~~~~g~~l~g~~~~~~p---- 69 (184)
T PF00596_consen 1 QELAEACRRLYERGLVDGTGGNISVRVPGD-------RFLITPSGVDKDELTPEDIVVVDLDDGNILEGDEGGGKP---- 69 (184)
T ss_dssp HHHHHHHHHHHHTTSSCTTBEEEEEEECTT-------EEEEEBTTS-GGGCTGGGEEEEETTTSEEEEESTTSSCB----
T ss_pred CHHHHHHHHHHHCCCcccCCCeEEEEecCC-------CEEEcCCCCChhhCChhhceEEeccccceeeccCCCCCC----
Confidence 689999999999999999999999999874 8999999999999999999999999 999965 1 2344
Q ss_pred CCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhh-cCCCcccccchhhHhhhhcCCcccCcceeeeeeCC-CCchh
Q 010820 109 PPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMI-NPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYENE 185 (500)
Q Consensus 109 p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~-~~~~~ 185 (500)
|+|+.+|..|||+| |++||+|+||++++++|+. +. +++...++....+.+. .||++||. +++.+
T Consensus 70 ----s~e~~lH~~iy~~rpdv~aViH~H~~~~~a~s~~~~~---~l~~~~~~~~~~~~~~------~v~~~~~~~~~~~~ 136 (184)
T PF00596_consen 70 ----SSETPLHAAIYRARPDVNAVIHTHPPYATALSCLAGE---PLPPITQEAARFYFGG------EVPVVPYAPPGSEE 136 (184)
T ss_dssp ----CTTHHHHHHHHHHCTTSSEEEEE--HHHHHHHTSSTC---CCCSSSHHHHHTHTSS------CEEEE-THSTTCHH
T ss_pred ----CHhHHHHhHHHcCCCCCCEEEecChHHHHhHHhhhhc---ccccchhhHHhhhcCc------cceeeccccccchh
Confidence 99999999999999 9999999999999999988 64 3443344444322121 49999995 58999
Q ss_pred HHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHH
Q 010820 186 LTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAI 235 (500)
Q Consensus 186 l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~ 235 (500)
+++.++++|+. +.+++||+|||+++||+|+++|+.+++.+|++|++++
T Consensus 137 l~~~i~~~l~~--~~~~vll~nHG~~~~G~s~~~A~~~~~~lE~~a~~~l 184 (184)
T PF00596_consen 137 LAEAIAEALGE--DRKAVLLRNHGVVVWGKSLEEAFYRAEYLERAAEIQL 184 (184)
T ss_dssp HHHHHHHHHTC--TSSEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhcC--CceEEeecCCceEEEeCCHHHHHHHHHHHHHHHHHhC
Confidence 99999999992 3699999999999999999999999999999999986
|
These proteins form part of a family that includes: rhamnulose-1-phosphate aldolase (4.1.2.19 from EC), L-fuculose phosphate aldolase (4.1.2.17 from EC) [, ] that is involved in the third step in fucose metabolism, L-ribulose- 5-phosphate 4-epimerase (5.1.3.4 from EC) involved in the third step of L-arabinose catabolism, a probable sugar isomerase SgbE, hypothetical proteins and the metazoan adducins which have not been ascribed any enzymatic function but which play a role in cell membrane cytoskeleton organisation. Adducins are members of the Ig superfamily and encode cell surface sialoglycoproteins expressed by cytokine-activated endothelium. This type I membrane protein mediates leukocyte-endothelial cell adhesion and signal transduction, and may play a role in the development of artherosclerosis and rheumatoid arthritis. Adducin is a cell-membrane skeletal protein that was first purified from human erythrocytes and subsequently isolated from bovine brain membranes. Isoforms of this protein have been detected in lung, kidney, testes and liver. Erythrocyte adducin is a 200kDa heterodimer protein, composed of alpha and beta subunits, present at about 30,000 copies per cell. It binds with high affinity to Ca(2+)/calmodulin and is a substrate for protein kinases A and C. Both alpha-adducin and beta-adducin show alternative splicing. Thus, there may be several different heterodimeric or homodimeric forms of adducin, each with a different functional specificity. It is thought to play a role in assembly of the spectrin-actin lattice that underlies the plasma membrane []. Missense mutations in both the alpha- and beta-adducin genes that alter amino acids that are normally phosphorylated have been associated with the regulation of blood pressure in the Milan hypertensive strain (MHS) of rats. Gamma adducin was isolated from human foetal brain []. It shows a high degree of similarity to the alpha and beta adducins.; GO: 0046872 metal ion binding; PDB: 2V9N_B 1GT7_B 2V9O_E 2V9M_B 2V9F_A 2UYV_A 1OJR_A 2V9G_C 2V29_B 2V9I_A .... |
| >KOG2631 consensus Class II aldolase/adducin N-terminal domain protein [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-33 Score=243.54 Aligned_cols=210 Identities=58% Similarity=1.001 Sum_probs=192.7
Q ss_pred HHhhccHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCC
Q 010820 21 YLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSP 100 (500)
Q Consensus 21 ~~~~~~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~ 100 (500)
+..+++.++.+.-|.++||.+|..||+.|+||-||++.++ .++|.|||+.+++++|+|+.++|++++.+..+
T Consensus 11 ~i~~~~~~~p~~Li~eLc~qFY~lgWvtGTGgai~ik~~~--------ei~iaPSgVQKErm~peDlfv~~~~~~~~~~P 82 (238)
T KOG2631|consen 11 RIGSMDLEHPRNLICELCRQFYHLGWVTGTGGAISIKHGD--------EIYIAPSGVQKERMQPEDLFVMDLNTEYISVP 82 (238)
T ss_pred cccCCCccchHHHHHHHHHHHHhcCceeccCCeEEEeeCC--------eeEeCcchhhhhhCCccceEEEecCCceeccC
Confidence 5677888888999999999999999999999999999988 69999999999999999999999999777653
Q ss_pred CCCCCCCCCCCCCCChHHHHHHHhhCCccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcC--Cc----ccCccee
Q 010820 101 SPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKG--HG----YYDELVV 174 (500)
Q Consensus 101 ~~~p~~~~p~~~S~e~~~H~~iy~~~~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g--~~----~~~~~~v 174 (500)
+..++.++|..+++..++|..|++.||||||+..++..+++.. .+.+..++.|+++++.+ .+ |++...|
T Consensus 83 ----~~~k~~k~s~CtpLF~~~y~~r~AgAvIHTHS~~Avl~t~L~~-~~~F~ith~EmIKgI~~~~~g~~~~y~D~L~v 157 (238)
T KOG2631|consen 83 ----KPSKKLKPSQCTPLFMAAYTMRDAGAVIHTHSQAAVLATLLFP-SDEFRITHQEMIKGIPKGNSGGYLPYFDTLVV 157 (238)
T ss_pred ----CCcCCCCccccHHHHHHHHHhcCCceEEEeccHHHHHHHhhcc-cceeEeehHHHHhcCCCCCCCccccccceEEE
Confidence 3345667799999999999999999999999999999999975 46899999999997765 33 7788889
Q ss_pred eeeeCCCCchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 010820 175 PIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLD 243 (500)
Q Consensus 175 p~~~~~~~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~ 243 (500)
|++++.|...+|.+.+.+++..+|+.-|||+||||+++||.|.+.|.-..|..|++.++.+.-+++|.+
T Consensus 158 PIIeNt~~E~~L~D~l~~aie~YP~tcAVLVR~HGvyvWG~TWekaKt~~EcydYLfelaikm~klgip 226 (238)
T KOG2631|consen 158 PIIENTPSESDLKDSLKKAIELYPDTCAVLVRRHGVYVWGPTWEKAKTMTECYDYLFELAIKMKKLGIP 226 (238)
T ss_pred eeecCCchHHHHHHHHHHHHHhCCcceEEEEecCcEEEecCcHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999976
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-27 Score=220.76 Aligned_cols=212 Identities=41% Similarity=0.693 Sum_probs=169.3
Q ss_pred ceEEEEecCCcccccccccccchHhHHhhhhhhhccccCchhhHHHHHHHHHHHhh----hhhhhccccccCCCC-CCCh
Q 010820 284 PRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVED----DLKQGVAGAVPIPPG-DAGK 358 (500)
Q Consensus 284 ~k~vlFD~DGTL~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~ 358 (500)
+++|+||+.||+.++++++|++|+++.+++..++..+|..+ ..+.++...+. .....+...+..+.. ..++
T Consensus 1 ~~~~l~diegt~~~isfv~~~lfpy~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~d~k~~~lk 76 (220)
T TIGR01691 1 IKNVLLDIEGTTGSISFVHDVLFPYAASRLESFVNDNYEST----IVENLRELGKTPEELILLRKLHAEMDKDRKATPLK 76 (220)
T ss_pred CCEEEEecCCCcccHHHHHhhhhHHHHHHHHHHHHHhCCCH----HHHHHHHhccCCcHHHHHHHHHHHHHcCCCcchHH
Confidence 47999999999999999999999999999999998887654 23333332211 111122222222222 2233
Q ss_pred hh-HHHHHHhhcccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHH
Q 010820 359 EE-GHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETP 437 (500)
Q Consensus 359 ~~-~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~ 437 (500)
.. +..|++.|.++..+.++|||+.++|++|+++|++++|+||++...+...+++++.+++.++|+.+|+.....||+|+
T Consensus 77 ~lqg~iw~~~Y~~~~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~ 156 (220)
T TIGR01691 77 TLQGLIWRQGYESGELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQ 156 (220)
T ss_pred HHHHHHHHHHHhcCCcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEeCcccCCCHH
Confidence 33 78899999988878899999999999999999999999999999999999887656788889998877667899999
Q ss_pred HHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCC-CC-ceeeCCccCC
Q 010820 438 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPEN-HG-FKTINSFAEI 500 (500)
Q Consensus 438 ~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~-~~-~~~i~~l~el 500 (500)
+|.+++++++++ |++|+||||+..|+++|+++||.++++.|+++.+.... .. .-.|+||.++
T Consensus 157 ~y~~i~~~lgv~-p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g~~~~~~~~~~~~~~~~~~~~~ 220 (220)
T TIGR01691 157 SYVKIAGQLGSP-PREILFLSDIINELDAARKAGLHTGQLVRPGNDPVVDPSFPVYPQFPDLNAV 220 (220)
T ss_pred HHHHHHHHhCcC-hhHEEEEeCCHHHHHHHHHcCCEEEEEECCCCCCCCcccCCCCCeecCcccC
Confidence 999999999998 99999999999999999999999999999876544333 22 6778888764
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.7e-28 Score=264.43 Aligned_cols=198 Identities=18% Similarity=0.159 Sum_probs=153.1
Q ss_pred HHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCC-CCCccEEEEecCCCCcCCCCCCCEEEEeCCC------------
Q 010820 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSI-PKPQQLILMSPSGVQKERMEPEDMYVLSGNG------------ 94 (500)
Q Consensus 28 ~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~-~~~~~~~~itpsg~~~~~l~~~di~~vd~~g------------ 94 (500)
+++++.+....+...+.||+.+++||+|+|+.+..+ +...+.|||||||.++++|+++||+.||+++
T Consensus 14 ~~~~~~v~~~~~l~~~~~l~~~~gGN~S~k~~~~~~~g~~~~~~~it~SG~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~ 93 (681)
T PRK08324 14 DELALLVYRSRLLGADPRLVNHGGGNTSVKTTETDLTGEPVEVLWVKGSGGDLATITAAGFAALRLDPLRALKELGVLSD 93 (681)
T ss_pred cHHHHHHHHHHHhCCCHHHhccCCceeeeeeeccccCCCeeeEEEEECCccChhhccccCCCeeeHHHHHhhhccCCcch
Confidence 556666666666667778999999999999854211 1223479999999999999999999999873
Q ss_pred ----------CcccCCCCCCCCCCCCCCCCChHHHHHHHhhCCccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhc
Q 010820 95 ----------TTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIK 164 (500)
Q Consensus 95 ----------~~~~g~~~~p~~~~p~~~S~e~~~H~~iy~~~~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~ 164 (500)
....|. .+| |+|+.||..||+ ++|+||||+|++++|+... ..++... .++
T Consensus 94 ~~~~~~~~~~~~~~~~-~~p--------S~e~~lH~~i~~----~~V~HtH~~~~~a~s~~~~---~~~~~~~----~~~ 153 (681)
T PRK08324 94 DEMVAYLRHCLFDPNA-PAP--------SIETLLHAFLPF----KHVDHTHPDAIIAIANAPD---GEELTRE----IFG 153 (681)
T ss_pred HHHHHHHHhhccCCCC-CCC--------chhHHHHhhcCC----CEEEecCchHHHHHHcCCC---HHHHHHH----HcC
Confidence 222222 233 999999999986 4699999999999999853 2222111 122
Q ss_pred CCcccCcceeeeeeCCCCchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhc--CC
Q 010820 165 GHGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL--GL 242 (500)
Q Consensus 165 g~~~~~~~~vp~~~~~~~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~--g~ 242 (500)
+ .|+++||.....+|++.+.+.+++.++.+++||+|||+++||+|+++||.+++.+|++|++++.+++. |+
T Consensus 154 ~-------~v~~~py~~pg~~l~~~~~~~~~~~~~~~~~lL~nHG~~~~G~~~~eA~~~~~~~e~~a~~~~~a~~~~~g~ 226 (681)
T PRK08324 154 D-------RVGWVPYVRPGFDLALAIAEAVRANPGAEGVVLGKHGLFTWGDTAKEAYERTIEIITRAEEYIEARGAGFGG 226 (681)
T ss_pred C-------ceEEcCccCCChHHHHHHHHHHHhCCCCcEEEECCCCCeeccCCHHHHHHHHHHHHHHHHHHHHHhccccCC
Confidence 2 39999995433789999999999877789999999999999999999999999999999999999988 55
Q ss_pred CC--CCCCCCCcc
Q 010820 243 DW--STPNHGPTR 253 (500)
Q Consensus 243 ~~--~~~~~~~~~ 253 (500)
+. .++.+ +.+
T Consensus 227 ~~~~~l~~~-~~~ 238 (681)
T PRK08324 227 AVYEALPAP-ERR 238 (681)
T ss_pred ccccCCCch-hHH
Confidence 43 44443 443
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.9e-27 Score=255.74 Aligned_cols=185 Identities=18% Similarity=0.118 Sum_probs=149.7
Q ss_pred HHHHHHHHHHHHHcCCccccCCceeEEeCCC-CC-CCCccEEEEecCCCCcCCCCCCCEEEEeCCC--------------
Q 010820 31 RVLISELCRHFYTLGWVSGTGGSITIKVHDD-SI-PKPQQLILMSPSGVQKERMEPEDMYVLSGNG-------------- 94 (500)
Q Consensus 31 ~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~-~~-~~~~~~~~itpsg~~~~~l~~~di~~vd~~g-------------- 94 (500)
++.+...++..+++||+.+++||+|+|+.++ |+ ..+.+.|||||||.++++|+++||+.||+++
T Consensus 2 ~~~v~~s~~~g~~~~l~~~~gGN~Svk~~~~~~~~g~~~~~~~I~~SG~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~ 81 (676)
T TIGR02632 2 AELVYRSNLLGADRRITNYGGGNTSAKTTETDPLTGGEVEVMWVKGSGGDLGTMTAANFAGLRLDKLRPLKERYPGVETE 81 (676)
T ss_pred HHHHHHHHHhCCCHHHhccCCccceeeccccCCCcCceeeEEEEECCccCHhhccccCCceEechHHHHHhhhccccCCH
Confidence 5678888999999999999999999998652 12 1122379999999999999999999999984
Q ss_pred ----------CcccCCCCCCCCCCCCCCCCChHHHHHHHhhCCccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhc
Q 010820 95 ----------TTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIK 164 (500)
Q Consensus 95 ----------~~~~g~~~~p~~~~p~~~S~e~~~H~~iy~~~~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~ 164 (500)
...++. .+| |+|+.||+.||. ++|.||||++++++++... ..+ +++.+.
T Consensus 82 ~~~v~~~~~~~~~~~~-~~P--------S~Et~lH~~i~~----~~v~HtH~~~~~a~a~~~~---~~~-----~~~~~~ 140 (676)
T TIGR02632 82 DEMVAYLPHCLFNLNG-RAP--------SIDTPLHAFVPF----KHVDHMHPDAIIALACAEN---GRE-----LTEEIF 140 (676)
T ss_pred HHHHHHHHhcccCCCC-CCC--------CccHHHHhhccc----ceEEecCchHHHHHhcCcc---HHH-----HHHHHc
Confidence 333332 234 999999999975 5677999999999998753 122 222222
Q ss_pred CCcccCcceeeeeeCCCCchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 010820 165 GHGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGL 242 (500)
Q Consensus 165 g~~~~~~~~vp~~~~~~~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~ 242 (500)
|. .|+++||.....+|++.+.+.++.+|+.++|||+|||+++||+|+++||.+++.+|+.|++++.+...|.
T Consensus 141 g~------~v~~vpy~~pG~~La~~~~~~~~~~~~~~~vll~~HGl~~~G~~~~eA~~~~~~~e~~a~~~~~~~~~g~ 212 (676)
T TIGR02632 141 GD------EVVWVPWRRPGFQLGLDIAAQVDANPQAKGVVLEGHGLVVWGDTAKECYERTLSIINEAEQFIEEKRGGE 212 (676)
T ss_pred CC------eEEEeccccCChHHHHHHHHHHHhCCCCcEEEEcCCCeEEecCCHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 21 3899999543357999999999987777999999999999999999999999999999999999998876
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-26 Score=220.91 Aligned_cols=206 Identities=13% Similarity=0.074 Sum_probs=142.8
Q ss_pred CCCceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCCh
Q 010820 281 GLFPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGK 358 (500)
Q Consensus 281 ~~~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (500)
..++++|+|||||||+ |+...+ +++.+...++.....+ .......+...+....+.+...+..... ...
T Consensus 19 ~~~~k~viFDlDGTLi------Ds~~~~~~a~~~~~~~~g~~~g~~--~~~~~~~~~~~G~~~~~~~~~~~~~~~~-~~~ 89 (248)
T PLN02770 19 LAPLEAVLFDVDGTLC------DSDPLHYYAFREMLQEINFNGGVP--ITEEFFVENIAGKHNEDIALGLFPDDLE-RGL 89 (248)
T ss_pred cCccCEEEEcCCCccC------cCHHHHHHHHHHHHHHhccccCCC--CCHHHHHHHcCCCCHHHHHHHHcCcchh-hHH
Confidence 4457999999999999 554333 4555554443210000 0011112233344444333333321111 111
Q ss_pred hhHHHHHHhhccc-CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCC
Q 010820 359 EEGHIWRTGFESN-ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRE 435 (500)
Q Consensus 359 ~~~~~~~~~~~~~-~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~ 435 (500)
.....+...|... .....++||+.++|+.|+++|++++|+||+....+...++++ ++.++|+.++ +.....||+
T Consensus 90 ~~~~~~~~~y~~~~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~---gl~~~Fd~iv~~~~~~~~KP~ 166 (248)
T PLN02770 90 KFTDDKEALFRKLASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLL---GLSDFFQAVIIGSECEHAKPH 166 (248)
T ss_pred HHHHHHHHHHHHHHHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHc---CChhhCcEEEecCcCCCCCCC
Confidence 1122233344432 234679999999999999999999999999999999999999 7788888777 445678999
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCC-CCceeeCCccC
Q 010820 436 TPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPEN-HGFKTINSFAE 499 (500)
Q Consensus 436 p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~-~~~~~i~~l~e 499 (500)
|++|.+++++++++ |++|+||||+..|+++|+++|+.+|++.++.....+.. .++++|+++.|
T Consensus 167 p~~~~~a~~~~~~~-~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 167 PDPYLKALEVLKVS-KDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYED 230 (248)
T ss_pred hHHHHHHHHHhCCC-hhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchh
Confidence 99999999999998 99999999999999999999999999998754333333 34899999886
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-25 Score=212.30 Aligned_cols=202 Identities=22% Similarity=0.245 Sum_probs=152.0
Q ss_pred CCceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCChh
Q 010820 282 LFPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKE 359 (500)
Q Consensus 282 ~~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (500)
|+++.|+||+||||+ |+...+ +++.....++.. ....+.++...+......+...+.....+....
T Consensus 2 ~~~~~iiFDlDGTL~------Ds~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~ 69 (220)
T COG0546 2 MMIKAILFDLDGTLV------DSAEDILRAFNAALAELGLP------PLDEEEIRQLIGLGLDELIERLLGEADEEAAAE 69 (220)
T ss_pred CCCCEEEEeCCCccc------cChHHHHHHHHHHHHHcCCC------CCCHHHHHHHhcCCHHHHHHHHhccccchhHHH
Confidence 568999999999999 665544 556666666554 123455666666666655554443222211111
Q ss_pred hHHH----HHHhhcccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCC
Q 010820 360 EGHI----WRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNK 433 (500)
Q Consensus 360 ~~~~----~~~~~~~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~K 433 (500)
.... |...+.... ...+|||+.++|..|+++|++++|+||.+.......++++ ++..+|+..+ +.....|
T Consensus 70 ~~~~~~~~~~~~~~~~~-~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~---gl~~~F~~i~g~~~~~~~K 145 (220)
T COG0546 70 LVERLREEFLTAYAELL-ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKAL---GLADYFDVIVGGDDVPPPK 145 (220)
T ss_pred HHHHHHHHHHHHHHhhc-cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHh---CCccccceEEcCCCCCCCC
Confidence 1223 333333222 3579999999999999999999999999999999999999 6778887777 4467789
Q ss_pred CCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCC-CCCCCCC-CceeeCCccCC
Q 010820 434 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGN-GPLPENH-GFKTINSFAEI 500 (500)
Q Consensus 434 P~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~-~~~~~~~-~~~~i~~l~el 500 (500)
|+|..+..++++++++ |++++||||+.+|+++|+++|+.++++.|++. ...+... ++++++++.||
T Consensus 146 P~P~~l~~~~~~~~~~-~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el 213 (220)
T COG0546 146 PDPEPLLLLLEKLGLD-PEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAEL 213 (220)
T ss_pred cCHHHHHHHHHHhCCC-hhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHH
Confidence 9999999999999998 99999999999999999999999999999864 3344444 49999998774
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-25 Score=213.44 Aligned_cols=203 Identities=19% Similarity=0.209 Sum_probs=143.0
Q ss_pred CCceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCChh
Q 010820 282 LFPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKE 359 (500)
Q Consensus 282 ~~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (500)
.++|+|+||+||||+ |+...+ +++.+.+.++.... ..+.++...+.+....+...+..........
T Consensus 10 ~~~k~viFD~DGTL~------Ds~~~~~~a~~~~~~~~g~~~~------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 77 (229)
T PRK13226 10 RFPRAVLFDLDGTLL------DSAPDMLATVNAMLAARGRAPI------TLAQLRPVVSKGARAMLAVAFPELDAAARDA 77 (229)
T ss_pred ccCCEEEEcCcCccc------cCHHHHHHHHHHHHHHCCCCCC------CHHHHHHHhhhHHHHHHHHHhccCChHHHHH
Confidence 356999999999999 554433 55555555554311 1233444444444443333222111111111
Q ss_pred hHHHHHHhhccc-CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCH
Q 010820 360 EGHIWRTGFESN-ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRET 436 (500)
Q Consensus 360 ~~~~~~~~~~~~-~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p 436 (500)
....|.+.|... ....+++||+.++|+.|+++|++++|+||+....+...++++ ++..+|+.++ +.....||+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~KP~p 154 (229)
T PRK13226 78 LIPEFLQRYEALIGTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQL---GWEQRCAVLIGGDTLAERKPHP 154 (229)
T ss_pred HHHHHHHHHHHhhhhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---CchhcccEEEecCcCCCCCCCH
Confidence 133445555433 223679999999999999999999999999999999999998 5667777655 3345689999
Q ss_pred HHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCC-C-CCCCC-CCceeeCCccCC
Q 010820 437 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGN-G-PLPEN-HGFKTINSFAEI 500 (500)
Q Consensus 437 ~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~-~-~~~~~-~~~~~i~~l~el 500 (500)
++|.+++++++++ |++|+||||+.+|+++|+++|+.+|++.|+.. . ..... .++++++++.||
T Consensus 155 ~~~~~~~~~l~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el 220 (229)
T PRK13226 155 LPLLVAAERIGVA-PTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLL 220 (229)
T ss_pred HHHHHHHHHhCCC-hhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHH
Confidence 9999999999998 99999999999999999999999999998843 2 22222 349999998764
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-25 Score=211.40 Aligned_cols=199 Identities=15% Similarity=0.097 Sum_probs=141.6
Q ss_pred CCceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCChh
Q 010820 282 LFPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKE 359 (500)
Q Consensus 282 ~~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (500)
|++++|+||+||||+ |+...+ +++.+...++.... ..+.+....+....+.+..+. ......
T Consensus 1 m~~~~viFD~DGTL~------ds~~~~~~a~~~~~~~~~~~~~------~~~~~~~~~G~~~~~~~~~~~----~~~~~~ 64 (214)
T PRK13288 1 MKINTVLFDLDGTLI------NTNELIISSFLHTLKTYYPNQY------KREDVLPFIGPSLHDTFSKID----ESKVEE 64 (214)
T ss_pred CCccEEEEeCCCcCc------cCHHHHHHHHHHHHHHhCCCCC------CHHHHHHHhCcCHHHHHHhcC----HHHHHH
Confidence 468999999999999 554333 44444443332100 122344445554444333321 111111
Q ss_pred hHHHHHHhhccc-CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCH
Q 010820 360 EGHIWRTGFESN-ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRET 436 (500)
Q Consensus 360 ~~~~~~~~~~~~-~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p 436 (500)
....|...+... .....++||+.++|+.|+++|++++|+||+....+..+++.+ ++..+|+.++ +.....||+|
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~---gl~~~f~~i~~~~~~~~~Kp~p 141 (214)
T PRK13288 65 MITTYREFNHEHHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLT---GLDEFFDVVITLDDVEHAKPDP 141 (214)
T ss_pred HHHHHHHHHHHhhhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---CChhceeEEEecCcCCCCCCCc
Confidence 123344433322 234679999999999999999999999999999999999999 6788888777 4456689999
Q ss_pred HHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCC-CCCCC-CCCceeeCCccCC
Q 010820 437 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGN-GPLPE-NHGFKTINSFAEI 500 (500)
Q Consensus 437 ~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~-~~~~~-~~~~~~i~~l~el 500 (500)
++|.+++++++++ |++|+||||+.+|+++|+++|+.++++.|+.. ...+. ..++++++++.||
T Consensus 142 ~~~~~~~~~~~~~-~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l 206 (214)
T PRK13288 142 EPVLKALELLGAK-PEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDL 206 (214)
T ss_pred HHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHH
Confidence 9999999999998 99999999999999999999999999999843 32222 2348999998764
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.8e-25 Score=221.66 Aligned_cols=206 Identities=12% Similarity=0.023 Sum_probs=150.8
Q ss_pred CCCCCCceEEEEecCCcccccccccccchHh---HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCC
Q 010820 278 YGSGLFPRCIVLDIEGTTTPISFVSEVLFPY---ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPG 354 (500)
Q Consensus 278 ~~~~~~~k~vlFD~DGTL~~~~~~~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (500)
.+|.-..++|||||||||+ |+.... +++.+...++.... ..+.++...+.+..+.+..++.....
T Consensus 125 ~~~~~~~~~VIFDlDGTLI------DS~~~i~~~a~~~l~~e~G~~~~------~~e~~~~~~G~~~~~~l~~ll~~~~~ 192 (381)
T PLN02575 125 ERMGCGWLGAIFEWEGVII------EDNPDLENQAWLTLAQEEGKSPP------PAFILRRVEGMKNEQAISEVLCWSRD 192 (381)
T ss_pred HhccCCCCEEEEcCcCcce------eCHHHHHHHHHHHHHHHcCCCCC------HHHHHHHhcCCCHHHHHHHHhhccCC
Confidence 3455588999999999999 554322 56666656665421 23344555666655555554432111
Q ss_pred CC-ChhhHHHHHHhhcccC-cccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccc
Q 010820 355 DA-GKEEGHIWRTGFESNE-LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAV 430 (500)
Q Consensus 355 ~~-~~~~~~~~~~~~~~~~-~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~ 430 (500)
.. .......+.+.|.+.. ....++||+.++|+.|+++|++++|+||+.+..+...++++ ++.+||+.++ +...
T Consensus 193 ~~~~e~l~~~~~~~y~~~~~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~l---gL~~yFd~Iv~sddv~ 269 (381)
T PLN02575 193 PAELRRMATRKEEIYQALQGGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSI---GIRGFFSVIVAAEDVY 269 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---CCHHHceEEEecCcCC
Confidence 11 1111333444454332 23579999999999999999999999999999999999999 7788898888 4456
Q ss_pred cCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 431 GNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 431 ~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
..||+|++|..++++++++ |++|+||||+..|+++|+++||.+|++.+++.... ...++++|+++.||
T Consensus 270 ~~KP~Peifl~A~~~lgl~-Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~-l~~Ad~iI~s~~EL 337 (381)
T PLN02575 270 RGKPDPEMFIYAAQLLNFI-PERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYE-LGAADLVVRRLDEL 337 (381)
T ss_pred CCCCCHHHHHHHHHHcCCC-cccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhH-hcCCCEEECCHHHH
Confidence 6899999999999999998 99999999999999999999999999987543222 22348899998775
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.3e-25 Score=213.91 Aligned_cols=204 Identities=12% Similarity=0.013 Sum_probs=145.4
Q ss_pred CCCCceEEEEecCCcccccccccccchH---hHHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCC
Q 010820 280 SGLFPRCIVLDIEGTTTPISFVSEVLFP---YARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDA 356 (500)
Q Consensus 280 ~~~~~k~vlFD~DGTL~~~~~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (500)
-.-.+|+|||||||||+ |+... .+++.+...++..+. ..+.++...+......+...+.......
T Consensus 20 ~~~~~k~vIFDlDGTLv------DS~~~~~~~a~~~~~~~~G~~~~------~~e~~~~~~G~~~~~~~~~l~~~~~~~~ 87 (260)
T PLN03243 20 LGCGWLGVVLEWEGVIV------EDDSELERKAWRALAEEEGKRPP------PAFLLKRAEGMKNEQAISEVLCWSRDFL 87 (260)
T ss_pred hcCCceEEEEeCCCcee------CCchHHHHHHHHHHHHHcCCCCC------HHHHHHHhcCCCHHHHHHHHhccCCCHH
Confidence 34568999999999999 66422 256666666665422 1233444555555444444332111110
Q ss_pred -ChhhHHHHHHhhccc-CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccC
Q 010820 357 -GKEEGHIWRTGFESN-ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGN 432 (500)
Q Consensus 357 -~~~~~~~~~~~~~~~-~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~ 432 (500)
.......+...+... .....++||+.++|+.|+++|++++|+||+....+..+++++ ++.++|+.++ +.....
T Consensus 88 ~~~~l~~~~~~~~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~---gl~~~Fd~ii~~~d~~~~ 164 (260)
T PLN03243 88 QMKRLAIRKEDLYEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAV---GMEGFFSVVLAAEDVYRG 164 (260)
T ss_pred HHHHHHHHHHHHHHHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHc---CCHhhCcEEEecccCCCC
Confidence 011122233333221 223578999999999999999999999999999999999999 6788888877 445668
Q ss_pred CCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 433 KRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 433 KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
||+|++|..++++++++ |++|+||||+..|+++|+++||.+|++.+...... ...++++|+++.||
T Consensus 165 KP~Pe~~~~a~~~l~~~-p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~-l~~ad~vi~~~~el 230 (260)
T PLN03243 165 KPDPEMFMYAAERLGFI-PERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYE-LSAGDLVVRRLDDL 230 (260)
T ss_pred CCCHHHHHHHHHHhCCC-hHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhh-hccCCEEeCCHHHH
Confidence 99999999999999998 99999999999999999999999999974333222 22348899988764
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.6e-25 Score=206.40 Aligned_cols=196 Identities=18% Similarity=0.192 Sum_probs=134.3
Q ss_pred CCceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCChh
Q 010820 282 LFPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKE 359 (500)
Q Consensus 282 ~~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (500)
|++|+|+||+||||+ |+...+ +++.+...++.. .. +......+......++.+.. .... ..
T Consensus 1 M~~k~viFDlDGTL~------Ds~~~~~~a~~~~~~~~g~~------~~--~~~~~~~g~~~~~~~~~~~~-~~~~--~~ 63 (218)
T PRK11587 1 MRCKGFLFDLDGTLV------DSLPAVERAWSNWADRHGIA------PD--EVLNFIHGKQAITSLRHFMA-GASE--AE 63 (218)
T ss_pred CCCCEEEEcCCCCcC------cCHHHHHHHHHHHHHHcCCC------HH--HHHHHHcCCCHHHHHHHHhc-cCCc--HH
Confidence 468999999999999 654433 556666555543 11 11122223333333333221 1111 11
Q ss_pred hHHHHHH--hhc-ccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCC
Q 010820 360 EGHIWRT--GFE-SNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKR 434 (500)
Q Consensus 360 ~~~~~~~--~~~-~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP 434 (500)
....+.. .+. .......++||+.++|+.|+++|++++|+||+........++.. ++ .+|+.++ +.....||
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~---~l-~~~~~i~~~~~~~~~KP 139 (218)
T PRK11587 64 IQAEFTRLEQIEATDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAA---GL-PAPEVFVTAERVKRGKP 139 (218)
T ss_pred HHHHHHHHHHHHHhhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhc---CC-CCccEEEEHHHhcCCCC
Confidence 1122222 111 12334679999999999999999999999999988888888777 33 2344444 34556799
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 435 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
+|++|..++++++++ |++|+||||+..|+++|+++|+.+|++.++..... ...++++++++.||
T Consensus 140 ~p~~~~~~~~~~g~~-p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~-~~~~~~~~~~~~el 203 (218)
T PRK11587 140 EPDAYLLGAQLLGLA-PQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPR-LDEVDLVLHSLEQL 203 (218)
T ss_pred CcHHHHHHHHHcCCC-cccEEEEecchhhhHHHHHCCCEEEEECCCCchhh-hccCCEEecchhhe
Confidence 999999999999998 99999999999999999999999999987643222 22348999998875
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-24 Score=205.69 Aligned_cols=204 Identities=20% Similarity=0.179 Sum_probs=140.5
Q ss_pred CCCceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhcccccc-CCCCCC-
Q 010820 281 GLFPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVP-IPPGDA- 356 (500)
Q Consensus 281 ~~~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~- 356 (500)
.+++++|+||+||||+ |+...+ +++.+...++..... .+.+....+............ ..+...
T Consensus 4 ~~~~k~iiFD~DGTL~------d~~~~~~~a~~~~~~~~g~~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 71 (222)
T PRK10826 4 PRQILAAIFDMDGLLI------DSEPLWDRAELDVMASLGVDISR------REELPDTLGLRIDQVVDLWYARQPWNGPS 71 (222)
T ss_pred cccCcEEEEcCCCCCC------cCHHHHHHHHHHHHHHCCCCCCH------HHHHHHhhCCCHHHHHHHHHHhcCCCCCC
Confidence 3458999999999999 543333 555555555543221 122333333222221111111 111111
Q ss_pred ChhhHHHHHHhhccc-CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCC
Q 010820 357 GKEEGHIWRTGFESN-ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNK 433 (500)
Q Consensus 357 ~~~~~~~~~~~~~~~-~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~K 433 (500)
.......+.+.+... .....++||+.++|+.|+++|++++|+||+....+..+++++ ++..+|+.++ +.....|
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~K 148 (222)
T PRK10826 72 RQEVVQRIIARVISLIEETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMF---DLRDYFDALASAEKLPYSK 148 (222)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhC---cchhcccEEEEcccCCCCC
Confidence 111122222222221 234679999999999999999999999999999999999998 6777787777 4456789
Q ss_pred CCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCC-CCCceeeCCccCC
Q 010820 434 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPE-NHGFKTINSFAEI 500 (500)
Q Consensus 434 P~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~-~~~~~~i~~l~el 500 (500)
|+|++|+.++++++++ |++|+||||+.+|+++|+++|+++|++.++....... ..++++++++.||
T Consensus 149 p~~~~~~~~~~~~~~~-~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl 215 (222)
T PRK10826 149 PHPEVYLNCAAKLGVD-PLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTEL 215 (222)
T ss_pred CCHHHHHHHHHHcCCC-HHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHH
Confidence 9999999999999998 9999999999999999999999999999875443222 2348899998775
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.5e-24 Score=202.75 Aligned_cols=198 Identities=18% Similarity=0.210 Sum_probs=138.1
Q ss_pred EEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccC---CCCCC-Chhh
Q 010820 287 IVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPI---PPGDA-GKEE 360 (500)
Q Consensus 287 vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~ 360 (500)
|+||+||||+ |+...+ +++.+...++.... ..+.+....+......+...+.. ..... ....
T Consensus 1 viFD~DGTL~------Ds~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (213)
T TIGR01449 1 VLFDLDGTLV------DSAPDIAAAVNMALAALGLPPA------TLARVIGFIGNGVPVLMERVLAWAGQEPDAQRVAEL 68 (213)
T ss_pred CeecCCCccc------cCHHHHHHHHHHHHHHCCCCCC------CHHHHHHHhcccHHHHHHHHhhccccccChHHHHHH
Confidence 6999999999 554433 44444444444211 11223333444333332332221 11111 1111
Q ss_pred HHHHHHhhcccC-cccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHH
Q 010820 361 GHIWRTGFESNE-LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETP 437 (500)
Q Consensus 361 ~~~~~~~~~~~~-~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~ 437 (500)
...|.+.|.... ....++||+.++|+.|+++|++++|+||+....+...++++ ++..+|+.++ +.....||+|+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~Kp~p~ 145 (213)
T TIGR01449 69 RKLFDRHYEEVAGELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELL---GLAKYFSVLIGGDSLAQRKPHPD 145 (213)
T ss_pred HHHHHHHHHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---CcHhhCcEEEecCCCCCCCCChH
Confidence 344455555432 24689999999999999999999999999999999999999 6677777766 33556799999
Q ss_pred HHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCC-CCCCC-CCCceeeCCccCC
Q 010820 438 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGN-GPLPE-NHGFKTINSFAEI 500 (500)
Q Consensus 438 ~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~-~~~~~-~~~~~~i~~l~el 500 (500)
+|.+++++++++ |++|+||||+.+|+++|+++|+.++++.++.. ...+. ..++++|+++.||
T Consensus 146 ~~~~~~~~~~~~-~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l 209 (213)
T TIGR01449 146 PLLLAAERLGVA-PQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNEL 209 (213)
T ss_pred HHHHHHHHcCCC-hhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHH
Confidence 999999999998 99999999999999999999999999998743 22332 2348999998764
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-24 Score=210.41 Aligned_cols=124 Identities=17% Similarity=0.130 Sum_probs=105.4
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccc-cccc--cccccCCCCHHHHHHHHHHcCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL-SGFF--DTAVGNKRETPSYVEITNSLGVDK 450 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f-~~~~--d~~~~~KP~p~~~~~~l~~l~v~~ 450 (500)
...++||+.++|+.|+++|++++|+||+....+..+++++ ++.++| +.++ +.....||+|++|.++++++++.+
T Consensus 97 ~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~---gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~ 173 (253)
T TIGR01422 97 YSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEA---ALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYD 173 (253)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHH---HhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999999999999999999 667774 6555 445678999999999999999933
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCC------------------------CCCCCC-CceeeCCccCC
Q 010820 451 PSEILFVTDVYQEATAAKAAGLEVVISIRPGNG------------------------PLPENH-GFKTINSFAEI 500 (500)
Q Consensus 451 p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~------------------------~~~~~~-~~~~i~~l~el 500 (500)
|++|+||||+.+|+++|+++||.+|++.++... ..+... ++++|+++.||
T Consensus 174 ~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~el 248 (253)
T TIGR01422 174 VAACVKVGDTVPDIEEGRNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLKAAGAHYVIDTLAEL 248 (253)
T ss_pred chheEEECCcHHHHHHHHHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHHhcCCCEehhcHHHH
Confidence 899999999999999999999999999987531 122233 38999998875
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.8e-24 Score=202.74 Aligned_cols=123 Identities=19% Similarity=0.222 Sum_probs=106.7
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
...++||+.++|+.|+++|++++|+||+....+...++++ ++..+|+.++ +.....||+|++|..++++++++ |
T Consensus 92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~-~ 167 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERL---GVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVK-P 167 (221)
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhC---ChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCC-h
Confidence 3579999999999999999999999999999999999999 7788888777 44667899999999999999998 9
Q ss_pred CcEEEEeCCH-hhHHHHHHcCCcEEEEcCCCCCC-C-C-CCCCceeeCCccCC
Q 010820 452 SEILFVTDVY-QEATAAKAAGLEVVISIRPGNGP-L-P-ENHGFKTINSFAEI 500 (500)
Q Consensus 452 ~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~-~-~-~~~~~~~i~~l~el 500 (500)
++|+||||+. +|+.+|+++|+.+|++.++.... . . ...++++|+++.||
T Consensus 168 ~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el 220 (221)
T TIGR02253 168 EEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220 (221)
T ss_pred hhEEEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence 9999999998 89999999999999999874322 1 1 22348999999875
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.6e-24 Score=208.01 Aligned_cols=205 Identities=20% Similarity=0.243 Sum_probs=145.8
Q ss_pred CCCCceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCC-----
Q 010820 280 SGLFPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIP----- 352 (500)
Q Consensus 280 ~~~~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 352 (500)
+...+|+|+|||||||+ |+...+ +++.+...++.... ..+.++...+.+........+...
T Consensus 9 ~~~~~k~viFDlDGTL~------Ds~~~~~~a~~~~~~~~g~~~~------~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 76 (272)
T PRK13223 9 PGRLPRLVMFDLDGTLV------DSVPDLAAAVDRMLLELGRPPA------GLEAVRHWVGNGAPVLVRRALAGSIDHDG 76 (272)
T ss_pred CCccCCEEEEcCCCccc------cCHHHHHHHHHHHHHHcCCCCC------CHHHHHHHhChhHHHHHHHHhcccccccC
Confidence 34568999999999999 554444 55666666655421 123333444444333333222111
Q ss_pred CCC-CChhhHHHHHHhhcccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--ccc
Q 010820 353 PGD-AGKEEGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTA 429 (500)
Q Consensus 353 ~~~-~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~ 429 (500)
..+ ........|.+.|........++||+.++|+.|+++|++++|+||++...+..+++.+ ++..+|+.++ +..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~---~i~~~f~~i~~~d~~ 153 (272)
T PRK13223 77 VDDELAEQALALFMEAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQM---KIGRYFRWIIGGDTL 153 (272)
T ss_pred CCHHHHHHHHHHHHHHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHc---CcHhhCeEEEecCCC
Confidence 111 1112244455555544344679999999999999999999999999999999999988 5667777666 334
Q ss_pred ccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCC-C-CCCCceeeCCccCC
Q 010820 430 VGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPL-P-ENHGFKTINSFAEI 500 (500)
Q Consensus 430 ~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~-~-~~~~~~~i~~l~el 500 (500)
...||+|++|+.++++++++ |++|+||||+.+|+++|+++|++++++.++..... . ...++++|+++.||
T Consensus 154 ~~~Kp~p~~~~~~~~~~g~~-~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el 225 (272)
T PRK13223 154 PQKKPDPAALLFVMKMAGVP-PSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRAL 225 (272)
T ss_pred CCCCCCcHHHHHHHHHhCCC-hhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHH
Confidence 56799999999999999998 99999999999999999999999999998743322 2 22459999998764
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.7e-24 Score=203.70 Aligned_cols=202 Identities=12% Similarity=0.103 Sum_probs=137.8
Q ss_pred ceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccC-CCCC-CChh
Q 010820 284 PRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPI-PPGD-AGKE 359 (500)
Q Consensus 284 ~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~ 359 (500)
+|+|+||+||||+| +...+ +++.+...++...... +..+.+.+....+.+...+.. .... ....
T Consensus 1 ~k~iiFD~DGTL~d------s~~~~~~~~~~~~~~~g~~~~~~------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 68 (220)
T TIGR03351 1 ISLVVLDMAGTTVD------EDGLVYRALRQAVTAAGLSPTPE------EVQSAWMGQSKIEAIRALLALDGADEAEAQA 68 (220)
T ss_pred CcEEEEecCCCeec------cCchHHHHHHHHHHHcCCCCCHH------HHHHhhcCCCHHHHHHHHHhccCCCHHHHHH
Confidence 58999999999994 43333 4444444555432211 111113343333333333211 1111 1111
Q ss_pred hHHHHHHhhccc--CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccc--ccccccc--cccccCC
Q 010820 360 EGHIWRTGFESN--ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR--KYLSGFF--DTAVGNK 433 (500)
Q Consensus 360 ~~~~~~~~~~~~--~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~--~~f~~~~--d~~~~~K 433 (500)
....|.+.+... ....+++||+.++|+.|+++|++++|+||+....+..+++++ ++. ++|+.++ +.....|
T Consensus 69 ~~~~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~---~l~~~~~f~~i~~~~~~~~~K 145 (220)
T TIGR03351 69 AFADFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKL---GWTVGDDVDAVVCPSDVAAGR 145 (220)
T ss_pred HHHHHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHh---hhhhhccCCEEEcCCcCCCCC
Confidence 123344443322 123589999999999999999999999999999999999999 566 7777766 3345689
Q ss_pred CCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcE-EEEcCCC-CCCCCCCC-CceeeCCccCC
Q 010820 434 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV-VISIRPG-NGPLPENH-GFKTINSFAEI 500 (500)
Q Consensus 434 P~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~-i~v~~~~-~~~~~~~~-~~~~i~~l~el 500 (500)
|+|++|..+++++++.+|++|+||||+..|+++|+++||.+ +++.++. ....+... ++++|+++.+|
T Consensus 146 P~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l 215 (220)
T TIGR03351 146 PAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADL 215 (220)
T ss_pred CCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHH
Confidence 99999999999999963699999999999999999999999 8998874 33333333 38888988764
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.3e-24 Score=206.61 Aligned_cols=106 Identities=17% Similarity=0.109 Sum_probs=93.1
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccc-cccc--cccccCCCCHHHHHHHHHHcCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL-SGFF--DTAVGNKRETPSYVEITNSLGVDK 450 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f-~~~~--d~~~~~KP~p~~~~~~l~~l~v~~ 450 (500)
...++||+.++|+.|+++|++++|+||+....+..+++.+ ++.++| +.++ +.....||+|++|..+++++++.+
T Consensus 99 ~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~---~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~ 175 (267)
T PRK13478 99 YATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLA---AAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYD 175 (267)
T ss_pred cCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHH---hhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCC
Confidence 4679999999999999999999999999999999999888 455553 5554 445668999999999999999963
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCC
Q 010820 451 PSEILFVTDVYQEATAAKAAGLEVVISIRPGN 482 (500)
Q Consensus 451 p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~ 482 (500)
|++|+||||+.+|+++|+++|+.+|++.+++.
T Consensus 176 ~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~ 207 (267)
T PRK13478 176 VAACVKVDDTVPGIEEGLNAGMWTVGVILSGN 207 (267)
T ss_pred CcceEEEcCcHHHHHHHHHCCCEEEEEccCcc
Confidence 69999999999999999999999999998754
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.2e-24 Score=198.11 Aligned_cols=192 Identities=18% Similarity=0.158 Sum_probs=135.8
Q ss_pred EEEecCCcccccccccccchHh--HHhhhhhh-hccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCChhhHHH
Q 010820 287 IVLDIEGTTTPISFVSEVLFPY--ARDNVGKH-LSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEGHI 363 (500)
Q Consensus 287 vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (500)
|+||+||||+ |+...+ +++..... .+... ...+.++...+......++. ++... . .. ...
T Consensus 1 iiFDlDGTL~------Ds~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~~~~~-~~~~~--~-~~-~~~ 63 (205)
T TIGR01454 1 VVFDLDGVLV------DSFAVMREAFAIAYREVVGDGP------APFEEYRRHLGRYFPDIMRI-MGLPL--E-ME-EPF 63 (205)
T ss_pred CeecCcCccc------cCHHHHHHHHHHHHHHhcCCCC------CCHHHHHHHhCccHHHHHHH-cCCCH--H-HH-HHH
Confidence 6899999999 665444 44444332 23321 11233444455444443332 22110 0 11 111
Q ss_pred HHHhhcccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHH
Q 010820 364 WRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVE 441 (500)
Q Consensus 364 ~~~~~~~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~ 441 (500)
+...+ ......+++||+.++|++|+++|++++|+||+....+...++++ ++.++|+.++ +.....||+|++|.+
T Consensus 64 ~~~~~-~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~KP~~~~~~~ 139 (205)
T TIGR01454 64 VRESY-RLAGEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEAL---GLLPLFDHVIGSDEVPRPKPAPDIVRE 139 (205)
T ss_pred HHHHH-HhhcccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHc---CChhheeeEEecCcCCCCCCChHHHHH
Confidence 22222 22335689999999999999999999999999999999999999 6677788777 335568999999999
Q ss_pred HHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCC-CCCCCCC-CCceeeCCccCC
Q 010820 442 ITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPG-NGPLPEN-HGFKTINSFAEI 500 (500)
Q Consensus 442 ~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~-~~~~~~~-~~~~~i~~l~el 500 (500)
++++++++ |++|+||||+.+|+++|+++|++++++.|+. ....+.. .++++++++.||
T Consensus 140 ~~~~~~~~-~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l 199 (205)
T TIGR01454 140 ALRLLDVP-PEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSL 199 (205)
T ss_pred HHHHcCCC-hhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHH
Confidence 99999998 9999999999999999999999999999984 4333333 348999988764
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.2e-23 Score=197.58 Aligned_cols=105 Identities=15% Similarity=0.179 Sum_probs=94.3
Q ss_pred cccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCC
Q 010820 373 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDK 450 (500)
Q Consensus 373 ~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~ 450 (500)
....++||+.++|+.|+++|++++|+||+....+...++++ ++.++|+.++ +.....||+|++|..++++++++
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~---~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~- 165 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHT---GLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLK- 165 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHC---CcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCC-
Confidence 34679999999999999999999999999999999999998 6788888877 44567899999999999999998
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCcE-EEEcCCC
Q 010820 451 PSEILFVTDVYQEATAAKAAGLEV-VISIRPG 481 (500)
Q Consensus 451 p~~~l~VGDs~~Di~aA~~aG~~~-i~v~~~~ 481 (500)
|++|+||||+..|+++|+++||++ +.+..+.
T Consensus 166 p~~~l~igDs~~di~aA~~aG~~~~~~v~~~~ 197 (224)
T PRK14988 166 AERTLFIDDSEPILDAAAQFGIRYCLGVTNPD 197 (224)
T ss_pred hHHEEEEcCCHHHHHHHHHcCCeEEEEEeCCC
Confidence 999999999999999999999986 5666653
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.2e-23 Score=198.14 Aligned_cols=204 Identities=20% Similarity=0.240 Sum_probs=143.4
Q ss_pred CCCceEEEEecCCcccccccccccchH--hHHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCC---CCC
Q 010820 281 GLFPRCIVLDIEGTTTPISFVSEVLFP--YARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIP---PGD 355 (500)
Q Consensus 281 ~~~~k~vlFD~DGTL~~~~~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 355 (500)
.+++++|+||+||||+ |+... .++..+.+.++.... ....++...+......+...+... ...
T Consensus 3 ~~~~~~iiFD~DGTL~------d~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 70 (226)
T PRK13222 3 FMDIRAVAFDLDGTLV------DSAPDLAAAVNAALAALGLPPA------GEERVRTWVGNGADVLVERALTWAGREPDE 70 (226)
T ss_pred CCcCcEEEEcCCcccc------cCHHHHHHHHHHHHHHCCCCCC------CHHHHHHHhCccHHHHHHHHHhhccCCccH
Confidence 4668999999999999 44322 245555555554311 122233333333333333322211 111
Q ss_pred C-ChhhHHHHHHhhcccCc-ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--ccccc
Q 010820 356 A-GKEEGHIWRTGFESNEL-EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVG 431 (500)
Q Consensus 356 ~-~~~~~~~~~~~~~~~~~-~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~ 431 (500)
. .......|.+.|..... ...++||+.++|+.|+++|++++++||+....+..+++++ ++..+|+.++ +....
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~ 147 (226)
T PRK13222 71 ELLEKLRELFDRHYAENVAGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEAL---GIADYFSVVIGGDSLPN 147 (226)
T ss_pred HHHHHHHHHHHHHHHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---CCccCccEEEcCCCCCC
Confidence 1 11113445555554332 4679999999999999999999999999999999999999 5677777766 33456
Q ss_pred CCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCC-CCCCC-CCCceeeCCccCC
Q 010820 432 NKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGN-GPLPE-NHGFKTINSFAEI 500 (500)
Q Consensus 432 ~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~-~~~~~-~~~~~~i~~l~el 500 (500)
.||+|++|+.++++++++ |++|+||||+.+|+++|+++|+.+|++.++.. ..... ..++++++++.+|
T Consensus 148 ~kp~~~~~~~~~~~~~~~-~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l 217 (226)
T PRK13222 148 KKPDPAPLLLACEKLGLD-PEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAEL 217 (226)
T ss_pred CCcChHHHHHHHHHcCCC-hhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHH
Confidence 899999999999999998 99999999999999999999999999998743 22222 2348999998764
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-23 Score=198.89 Aligned_cols=122 Identities=16% Similarity=0.169 Sum_probs=103.7
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
..++||+.++|+.|+ +|++++|+||+....+...++++ ++.++|+.++ +.....||+|++|..+++++++.+++
T Consensus 94 ~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~---~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 169 (224)
T PRK09449 94 CTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERT---GLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRS 169 (224)
T ss_pred CccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhC---ChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcc
Confidence 569999999999999 68999999999999999999999 6788888887 44566899999999999999986358
Q ss_pred cEEEEeCCH-hhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 453 EILFVTDVY-QEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 453 ~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
+|+||||+. +|+++|+++||+++++.+++........++++|+++.||
T Consensus 170 ~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el 218 (224)
T PRK09449 170 RVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSEL 218 (224)
T ss_pred cEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHH
Confidence 999999998 799999999999999986543222222358999998764
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.2e-23 Score=210.95 Aligned_cols=201 Identities=16% Similarity=0.136 Sum_probs=140.1
Q ss_pred CceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccC-CCCCCChh
Q 010820 283 FPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPI-PPGDAGKE 359 (500)
Q Consensus 283 ~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 359 (500)
.+++|+||+||||+ |+...+ +++.+...++..+.. +.+....+......+...+.. ........
T Consensus 10 ~ik~VIFDlDGTLv------Dt~~~~~~a~~~~~~~~G~~~~~-------~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 76 (382)
T PLN02940 10 LVSHVILDLDGTLL------NTDGIVSDVLKAFLVKYGKQWDG-------REAQKIVGKTPLEAAATVVEDYGLPCSTDE 76 (382)
T ss_pred cCCEEEECCcCcCC------cCHHHHHHHHHHHHHHcCCCCCH-------HHHHHhcCCCHHHHHHHHHHHhCCCCCHHH
Confidence 48999999999999 554433 555555555554321 112333333222222221110 11111111
Q ss_pred hHHHHHHhhcccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHh-ccCcccccccccccc--cccccCCCCH
Q 010820 360 EGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFG-NSNYGDLRKYLSGFF--DTAVGNKRET 436 (500)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~-~~~~~~l~~~f~~~~--d~~~~~KP~p 436 (500)
....+...+........++||+.++|+.|+++|++++|+||+....+...++ .. ++.++|+.++ +.....||+|
T Consensus 77 ~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~---gl~~~Fd~ii~~d~v~~~KP~p 153 (382)
T PLN02940 77 FNSEITPLLSEQWCNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQ---GWKESFSVIVGGDEVEKGKPSP 153 (382)
T ss_pred HHHHHHHHHHHHHccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcc---ChHhhCCEEEehhhcCCCCCCH
Confidence 1222333333333356799999999999999999999999999999998887 67 6778888877 4466789999
Q ss_pred HHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 437 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 437 ~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
++|.+++++++++ |++|+||||+..|+++|+++||.+|++.++.........++++++++.||
T Consensus 154 ~~~~~a~~~lgv~-p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el 216 (382)
T PLN02940 154 DIFLEAAKRLNVE-PSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDL 216 (382)
T ss_pred HHHHHHHHHcCCC-hhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCCHhHc
Confidence 9999999999998 99999999999999999999999999998743332222348899998775
|
|
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.4e-23 Score=179.46 Aligned_cols=214 Identities=41% Similarity=0.724 Sum_probs=184.5
Q ss_pred ceEEEEecCCcccccccccccchHhHHhhhhhhhccccCchhhHHHHHHHHHHHhhhh-hh-hccccccC---CC-CCCC
Q 010820 284 PRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDL-KQ-GVAGAVPI---PP-GDAG 357 (500)
Q Consensus 284 ~k~vlFD~DGTL~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~---~~-~~~~ 357 (500)
.|+|+.|+.||.-.++|+.|.+|+++.+++.++...++..++......+++...+... .+ ....++.+ +. ...+
T Consensus 4 ~kaiLlDIEGTv~~iSFVkdvlFPYa~~~lp~fv~e~~e~~~v~~~v~~v~~e~g~~~s~E~lva~~~~wiaed~K~t~l 83 (229)
T COG4229 4 VKAILLDIEGTVSPISFVKDVLFPYAARKLPDFVRENTEDSEVKKIVDEVLSEFGIANSEEALVALLLEWIAEDSKDTPL 83 (229)
T ss_pred hhhheeeccccccchhHHHhhhhHHHHHHhHHHHHhhccCChhhHHHHHHHHHhCccchHHHHHHHHHHHHhcccccchH
Confidence 5899999999999999999999999999999999999988877777777777776543 22 22222111 11 1222
Q ss_pred hhh-HHHHHHhhcccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCH
Q 010820 358 KEE-GHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRET 436 (500)
Q Consensus 358 ~~~-~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p 436 (500)
+.. +..|.+.|+++..+.++||++.+.|+++++.|++++|.|+++...|...+.+...++|..+|+++||+..+.|...
T Consensus 84 K~lQG~iWa~Gy~sgelkahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDttiG~KrE~ 163 (229)
T COG4229 84 KALQGMIWAHGYESGELKAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDTTIGKKRES 163 (229)
T ss_pred HHHHhHHHHhccccCccccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeeccccccccc
Confidence 222 8999999999999999999999999999999999999999999999999999988899999999999988899999
Q ss_pred HHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCcc
Q 010820 437 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFA 498 (500)
Q Consensus 437 ~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~ 498 (500)
..|.++++..|++ |.+++|+.|.+..+.+|+.+||.++++.|+++.+-.......+++||.
T Consensus 164 ~SY~kIa~~iGl~-p~eilFLSDn~~EL~AA~~vGl~t~l~~R~g~~P~~d~~~~~~~~sf~ 224 (229)
T COG4229 164 QSYAKIAGDIGLP-PAEILFLSDNPEELKAAAGVGLATGLAVRPGNAPVPDGQGFLVYKSFE 224 (229)
T ss_pred hhHHHHHHhcCCC-chheEEecCCHHHHHHHHhcchheeeeecCCCCCCCCCcCceeeechh
Confidence 9999999999998 999999999999999999999999999999887776665677777775
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-23 Score=202.89 Aligned_cols=200 Identities=15% Similarity=0.080 Sum_probs=138.6
Q ss_pred CCceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCChh
Q 010820 282 LFPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKE 359 (500)
Q Consensus 282 ~~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (500)
.++++|+|||||||+ |+...+ +++.+.+.++..... .+.+....+......+.. ++... .....
T Consensus 60 ~~~k~vIFDlDGTLi------DS~~~~~~a~~~~~~~~G~~~~~------~~~~~~~~g~~~~~i~~~-~~~~~-~~~~~ 125 (273)
T PRK13225 60 QTLQAIIFDFDGTLV------DSLPTVVAIANAHAPDFGYDPID------ERDYAQLRQWSSRTIVRR-AGLSP-WQQAR 125 (273)
T ss_pred hhcCEEEECCcCccc------cCHHHHHHHHHHHHHHCCCCCCC------HHHHHHHhCccHHHHHHH-cCCCH-HHHHH
Confidence 368999999999999 665433 555555555543111 112222232222222222 22111 11111
Q ss_pred hHHHHHHhhcccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHH
Q 010820 360 EGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSY 439 (500)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~ 439 (500)
....+.+.+.......+++||+.++|+.|+++|++++|+||+....+...++++ ++.++|+.++... ..+++++.|
T Consensus 126 ~~~~~~~~~~~~~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~---gl~~~F~~vi~~~-~~~~k~~~~ 201 (273)
T PRK13225 126 LLQRVQRQLGDCLPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQ---GLRSLFSVVQAGT-PILSKRRAL 201 (273)
T ss_pred HHHHHHHHHHhhcccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---CChhheEEEEecC-CCCCCHHHH
Confidence 123344444444445689999999999999999999999999999999999999 6677777655221 124578999
Q ss_pred HHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCC-CCCC-CCceeeCCccCC
Q 010820 440 VEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGP-LPEN-HGFKTINSFAEI 500 (500)
Q Consensus 440 ~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~-~~~~-~~~~~i~~l~el 500 (500)
..++++++++ |++|+||||+..|+++|+++|+.+|++.++.... .+.. .++++|+++.||
T Consensus 202 ~~~l~~~~~~-p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL 263 (273)
T PRK13225 202 SQLVAREGWQ-PAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDL 263 (273)
T ss_pred HHHHHHhCcC-hhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHH
Confidence 9999999998 9999999999999999999999999999984433 2322 348999998764
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.8e-23 Score=200.56 Aligned_cols=125 Identities=21% Similarity=0.197 Sum_probs=102.0
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc-cccccCCCCHHHHHHHHHHcCCCCCCc
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSLGVDKPSE 453 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~-d~~~~~KP~p~~~~~~l~~l~v~~p~~ 453 (500)
..++||+.++|+.|+++|++++|+||+....+..+++.+.+.++..+|+.+. +.....||+|++|.+++++++++ |++
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~-p~~ 221 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVD-PSR 221 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcC-hHH
Confidence 4799999999999999999999999999999999888763223333333222 33456799999999999999998 999
Q ss_pred EEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 454 ILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 454 ~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
|+||||+.+|+++|+++||.+|++.++.........++++|+++.++
T Consensus 222 ~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~~l 268 (286)
T PLN02779 222 CVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDV 268 (286)
T ss_pred EEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECChhhc
Confidence 99999999999999999999999988743322223348999998875
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.8e-23 Score=193.92 Aligned_cols=183 Identities=20% Similarity=0.167 Sum_probs=131.2
Q ss_pred CceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhh---hhhccccccCCCCCCC
Q 010820 283 FPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDL---KQGVAGAVPIPPGDAG 357 (500)
Q Consensus 283 ~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 357 (500)
++++|||||||||+ |+...+ ++..+.+.++.... .+.+....+... ...+............
T Consensus 1 ~~~avIFD~DGvLv------Dse~~~~~a~~~~~~~~g~~~~-------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 67 (221)
T COG0637 1 MIKAVIFDMDGTLV------DSEPLHARAWLEALKEYGIEIS-------DEEIRELHGGGIARIIDLLRKLAAGEDPADL 67 (221)
T ss_pred CCcEEEEcCCCCcC------cchHHHHHHHHHHHHHcCCCCC-------HHHHHHHHCCChHHHHHHHHHHhcCCcccCH
Confidence 47899999999999 664444 77777777776532 122222222111 1111111111110111
Q ss_pred hhhHHHHHHhhcccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCC
Q 010820 358 KEEGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRE 435 (500)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~ 435 (500)
..................+++||+.++|..|+.+|++++++||+.+......++.+ ++.++|+.++ +.....||+
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~---gl~~~f~~~v~~~dv~~~KP~ 144 (221)
T COG0637 68 AELERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARL---GLLDYFDVIVTADDVARGKPA 144 (221)
T ss_pred HHHHHHHHHHHHhhhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHc---cChhhcchhccHHHHhcCCCC
Confidence 11122222222233445789999999999999999999999999999999999999 7888888877 445667999
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCC
Q 010820 436 TPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGN 482 (500)
Q Consensus 436 p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~ 482 (500)
|++|..+++++|+. |++|+.|+|+++++++|+++||.+|++..++.
T Consensus 145 Pd~yL~Aa~~Lgv~-P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~ 190 (221)
T COG0637 145 PDIYLLAAERLGVD-PEECVVVEDSPAGIQAAKAAGMRVVGVPAGHD 190 (221)
T ss_pred CHHHHHHHHHcCCC-hHHeEEEecchhHHHHHHHCCCEEEEecCCCC
Confidence 99999999999998 99999999999999999999999999987533
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-22 Score=188.83 Aligned_cols=106 Identities=25% Similarity=0.346 Sum_probs=97.1
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
...++||+.++|++|+++|++++|+||++...+...++++ ++.++|+.++ +.....||+|++|..++++++++ |
T Consensus 90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~---gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~-p 165 (198)
T TIGR01428 90 RLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHA---GLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVP-P 165 (198)
T ss_pred cCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHC---CChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCC-h
Confidence 3468999999999999999999999999999999999999 6778888877 44667899999999999999998 9
Q ss_pred CcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCC
Q 010820 452 SEILFVTDVYQEATAAKAAGLEVVISIRPGNG 483 (500)
Q Consensus 452 ~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~ 483 (500)
++|+||||+..|+++|+++||.+|++++++..
T Consensus 166 ~~~~~vgD~~~Di~~A~~~G~~~i~v~r~~~~ 197 (198)
T TIGR01428 166 DEVLFVASNPWDLGGAKKFGFKTAWVNRPGEP 197 (198)
T ss_pred hhEEEEeCCHHHHHHHHHCCCcEEEecCCCCC
Confidence 99999999999999999999999999987643
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.2e-23 Score=194.05 Aligned_cols=196 Identities=15% Similarity=0.149 Sum_probs=127.8
Q ss_pred CceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhcccc---ccCCCCCCC
Q 010820 283 FPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGA---VPIPPGDAG 357 (500)
Q Consensus 283 ~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 357 (500)
++++|+||+||||+ |+...+ +++.+....+..... .+.++...+.+....+... ++... ..
T Consensus 3 ~~~~viFD~DGTL~------d~~~~~~~a~~~~~~~~g~~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~ 68 (221)
T PRK10563 3 QIEAVFFDCDGTLV------DSEVICSRAYVTMFAEFGITLSL------EEVFKRFKGVKLYEIIDIISKEHGVTL--AK 68 (221)
T ss_pred CCCEEEECCCCCCC------CChHHHHHHHHHHHHHcCCCCCH------HHHHHHhcCCCHHHHHHHHHHHhCCCC--CH
Confidence 58999999999999 443222 444554445543211 1111222222222222221 22111 11
Q ss_pred hhhHHHHHHhhccc-CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccc-cc--cccccCC
Q 010820 358 KEEGHIWRTGFESN-ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSG-FF--DTAVGNK 433 (500)
Q Consensus 358 ~~~~~~~~~~~~~~-~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~-~~--d~~~~~K 433 (500)
......+...+... .....++||+.++|+.| +++++|+||+....+...++++ ++.++|+. ++ +.....|
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~---~l~~~F~~~v~~~~~~~~~K 142 (221)
T PRK10563 69 AELEPVYRAEVARLFDSELEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKT---GMLHYFPDKLFSGYDIQRWK 142 (221)
T ss_pred HHHHHHHHHHHHHHHHccCCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhc---ChHHhCcceEeeHHhcCCCC
Confidence 11122333322211 23467999999999999 3899999999999999999999 77888864 44 3456789
Q ss_pred CCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccC
Q 010820 434 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE 499 (500)
Q Consensus 434 P~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e 499 (500)
|+|++|..++++++++ |++|+||||+..|+++|+++|++++++..++........++.+++++.|
T Consensus 143 P~p~~~~~a~~~~~~~-p~~~l~igDs~~di~aA~~aG~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 207 (221)
T PRK10563 143 PDPALMFHAAEAMNVN-VENCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPIDHPLVTTFTDLAQ 207 (221)
T ss_pred CChHHHHHHHHHcCCC-HHHeEEEeCcHhhHHHHHHCCCEEEEECCCCCCcchhhhhhHHHHHHHH
Confidence 9999999999999998 9999999999999999999999999997553322222122445666554
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.6e-22 Score=188.18 Aligned_cols=121 Identities=17% Similarity=0.218 Sum_probs=105.6
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHc-CCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSL-GVDKP 451 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l-~v~~p 451 (500)
..++||+.++|+.|+++ ++++|+||+....+...++.+ ++..+|+.++ +.....||+|++|.++++++ +++ |
T Consensus 96 ~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~---~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~-~ 170 (224)
T TIGR02254 96 HQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKS---GLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFS-K 170 (224)
T ss_pred CeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHC---CcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCC-c
Confidence 57999999999999999 999999999999999999999 6778888887 33566899999999999999 998 9
Q ss_pred CcEEEEeCCH-hhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 452 SEILFVTDVY-QEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 452 ~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
++|+||||+. +|+++|+++||++|++++++........++++++++.||
T Consensus 171 ~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el 220 (224)
T TIGR02254 171 EEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEEL 220 (224)
T ss_pred hheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHH
Confidence 9999999998 799999999999999998744333233348999998764
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.4e-22 Score=209.34 Aligned_cols=204 Identities=18% Similarity=0.179 Sum_probs=137.2
Q ss_pred CCceEEEEecCCcccccccccccchHh--HHhhhhhhhccc--cCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCC
Q 010820 282 LFPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVT--YDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAG 357 (500)
Q Consensus 282 ~~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (500)
+++++|+|||||||+ |+...+ +++.+...++.. +... ...+.++...+.+..+.+..++.....+..
T Consensus 239 ~m~k~vIFDlDGTLi------Ds~~~~~~a~~~~~~~~~~~~~~~~~---~~~~~~~~~~G~~~~~~~~~l~~~~~~~~~ 309 (459)
T PRK06698 239 EMLQALIFDMDGTLF------QTDKILELSLDDTFDHLRSLQLWDTV---TPIDKYREIMGVPLPKVWEALLPDHSLEIR 309 (459)
T ss_pred HhhhheeEccCCcee------cchhHHHHHHHHHHHHHhhhcccCCC---CCHHHHHHHcCCChHHHHHHHhhhcchhHH
Confidence 346899999999999 554433 444433333210 1100 112344455555544444443321111111
Q ss_pred hhhHHHHHHhhccc--CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccc-cccCCC
Q 010820 358 KEEGHIWRTGFESN--ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT-AVGNKR 434 (500)
Q Consensus 358 ~~~~~~~~~~~~~~--~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~-~~~~KP 434 (500)
......|.+.+... ....+++||+.++|+.|+++|++++|+||+....+...++++ ++.++|+.++.. ....||
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~---~l~~~f~~i~~~d~v~~~~ 386 (459)
T PRK06698 310 EQTDAYFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYY---DLDQWVTETFSIEQINSLN 386 (459)
T ss_pred HHHHHHHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHC---CcHhhcceeEecCCCCCCC
Confidence 11123333333322 123579999999999999999999999999999999999999 677888877722 123478
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 435 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
+|++|..++++++ |++|+||||+.+|+++|+++||.+|++.++.........++++++++.||
T Consensus 387 kP~~~~~al~~l~---~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el 449 (459)
T PRK06698 387 KSDLVKSILNKYD---IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLEL 449 (459)
T ss_pred CcHHHHHHHHhcC---cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHH
Confidence 8999999999864 67999999999999999999999999998744322233458999998764
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=9e-22 Score=188.48 Aligned_cols=117 Identities=15% Similarity=0.099 Sum_probs=96.5
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
...++||+.++|+.|+++ ++++|+||++.. ++.+ ++..+|+.++ +.....||+|++|..++++++++ |
T Consensus 111 ~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~---gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~-~ 180 (238)
T PRK10748 111 RIDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELF---GLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVP-I 180 (238)
T ss_pred cCCCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHC---CcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCC-h
Confidence 467999999999999875 999999998875 2555 6788888777 44567899999999999999998 9
Q ss_pred CcEEEEeCC-HhhHHHHHHcCCcEEEEcCCCCC---CCC-CCCCceeeCCccCC
Q 010820 452 SEILFVTDV-YQEATAAKAAGLEVVISIRPGNG---PLP-ENHGFKTINSFAEI 500 (500)
Q Consensus 452 ~~~l~VGDs-~~Di~aA~~aG~~~i~v~~~~~~---~~~-~~~~~~~i~~l~el 500 (500)
++|+||||+ ..|+.+|+++||.++|+++++.. ... ...++++|.+|.||
T Consensus 181 ~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el 234 (238)
T PRK10748 181 GEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRLASL 234 (238)
T ss_pred hHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCHHHH
Confidence 999999999 59999999999999999986432 111 12348899998774
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=3e-21 Score=178.13 Aligned_cols=178 Identities=15% Similarity=0.185 Sum_probs=120.8
Q ss_pred CCceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCC-h
Q 010820 282 LFPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAG-K 358 (500)
Q Consensus 282 ~~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 358 (500)
.++++|+||+||||+ |+...+ +++.+...++..+. .+.++...+....+.+..++.....+.. .
T Consensus 3 ~~~~~viFD~DGTLi------Ds~~~~~~a~~~~~~~~g~~~~-------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 69 (188)
T PRK10725 3 DRYAGLIFDMDGTIL------DTEPTHRKAWREVLGRYGLQFD-------EQAMVALNGSPTWRIAQAIIELNQADLDPH 69 (188)
T ss_pred CcceEEEEcCCCcCc------cCHHHHHHHHHHHHHHcCCCCC-------HHHHHHhcCCCHHHHHHHHHHHhCCCCCHH
Confidence 357999999999999 554333 55555555554321 1122222332222222222111101111 1
Q ss_pred hhHHHHHHhhccc-CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCC
Q 010820 359 EEGHIWRTGFESN-ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRE 435 (500)
Q Consensus 359 ~~~~~~~~~~~~~-~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~ 435 (500)
.....+...+... .....++|+ .++|..|++. ++++|+||++...+...++++ ++.++|+.++ +.....||+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~---~l~~~fd~i~~~~~~~~~KP~ 144 (188)
T PRK10725 70 ALAREKTEAVKSMLLDSVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHL---GLRRYFDAVVAADDVQHHKPA 144 (188)
T ss_pred HHHHHHHHHHHHHHhccCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhC---CcHhHceEEEehhhccCCCCC
Confidence 1112222222222 223467885 6899999875 899999999999999999999 6788888777 445678999
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEc
Q 010820 436 TPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISI 478 (500)
Q Consensus 436 p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~ 478 (500)
|++|..++++++++ |++|+||||+..|+++|+++|+++|.+.
T Consensus 145 p~~~~~~~~~~~~~-~~~~l~igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 145 PDTFLRCAQLMGVQ-PTQCVVFEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred hHHHHHHHHHcCCC-HHHeEEEeccHhhHHHHHHCCCEEEeec
Confidence 99999999999998 9999999999999999999999999874
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-21 Score=178.68 Aligned_cols=98 Identities=24% Similarity=0.342 Sum_probs=88.1
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
...++||+.++|+.|+++|++++++||+ ..+..+++++ ++..+|+.++ +.....||+|++|.+++++++++ |
T Consensus 86 ~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~---~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~-~ 159 (185)
T TIGR02009 86 GAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKL---GLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVS-P 159 (185)
T ss_pred CCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHc---ChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCC-H
Confidence 3689999999999999999999999998 6678889888 6677788777 33556899999999999999998 9
Q ss_pred CcEEEEeCCHhhHHHHHHcCCcEEEE
Q 010820 452 SEILFVTDVYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 452 ~~~l~VGDs~~Di~aA~~aG~~~i~v 477 (500)
++|+||||+..|+++|+++|+++|+|
T Consensus 160 ~~~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 160 NECVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred HHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence 99999999999999999999999875
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-21 Score=178.69 Aligned_cols=97 Identities=21% Similarity=0.299 Sum_probs=86.7
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
..++||+.++|+.|+++|++++|+||+.. ...+++++ ++..+|+.++ +.....||+|++|+.++++++++ |+
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~-~~ 159 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKL---GLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVS-PS 159 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhc---CcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCC-HH
Confidence 47899999999999999999999999753 45678888 6778888777 44567899999999999999998 99
Q ss_pred cEEEEeCCHhhHHHHHHcCCcEEEE
Q 010820 453 EILFVTDVYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 453 ~~l~VGDs~~Di~aA~~aG~~~i~v 477 (500)
+|+||||+.+|+++|+++||++|+|
T Consensus 160 ~~v~vgD~~~di~aA~~aG~~~i~v 184 (185)
T TIGR01990 160 ECIGIEDAQAGIEAIKAAGMFAVGV 184 (185)
T ss_pred HeEEEecCHHHHHHHHHcCCEEEec
Confidence 9999999999999999999999987
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.3e-21 Score=178.27 Aligned_cols=97 Identities=20% Similarity=0.259 Sum_probs=86.8
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
..++||+.++|+.|+++|++++|+||+... +...++.+ ++..+|+.++ +.....||+|++|.+++++++++ |+
T Consensus 104 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~---~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~-~~ 178 (203)
T TIGR02252 104 WQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEAL---GLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGIS-PE 178 (203)
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHC---CcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCC-hh
Confidence 478999999999999999999999998875 46778888 6677888777 34566899999999999999998 99
Q ss_pred cEEEEeCCH-hhHHHHHHcCCcEEE
Q 010820 453 EILFVTDVY-QEATAAKAAGLEVVI 476 (500)
Q Consensus 453 ~~l~VGDs~-~Di~aA~~aG~~~i~ 476 (500)
+|+||||+. +|+++|+++||++||
T Consensus 179 ~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 179 EALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred HEEEECCCchHHHHHHHHcCCeeeC
Confidence 999999997 899999999999985
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.6e-21 Score=180.62 Aligned_cols=122 Identities=25% Similarity=0.276 Sum_probs=105.4
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
..+++|++.++|+.|+++ ++++|+||+....+..+++++ |+.++|+.++ +..+..||+|.+|+.+++++|++ |
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~---gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~-p 171 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQL---GLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVP-P 171 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHc---CChhhhheEEEecccccCCCCcHHHHHHHHHcCCC-c
Confidence 357999999999999998 999999999999999999999 6889999998 44677899999999999999998 9
Q ss_pred CcEEEEeCCH-hhHHHHHHcCCcEEEEcCCCCCC-CCCCCCceeeCCccCC
Q 010820 452 SEILFVTDVY-QEATAAKAAGLEVVISIRPGNGP-LPENHGFKTINSFAEI 500 (500)
Q Consensus 452 ~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~-~~~~~~~~~i~~l~el 500 (500)
++|+||||+. +||.+|+++||++||+++++... ......++.+.++.+|
T Consensus 172 ~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l 222 (229)
T COG1011 172 EEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAEL 222 (229)
T ss_pred ceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcCHHHH
Confidence 9999999998 78899999999999999875432 1112347888877653
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.3e-21 Score=174.09 Aligned_cols=101 Identities=29% Similarity=0.428 Sum_probs=93.2
Q ss_pred cccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCC
Q 010820 373 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDK 450 (500)
Q Consensus 373 ~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~ 450 (500)
...+++||+.++|+.|+++|++++++||++...+...++++ ++..+|+.++ +.....||+|++|.+++++++++
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~---~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~- 149 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERL---GLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIP- 149 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHT---THGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSS-
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCccccccccccc---ccccccccccccchhhhhhhHHHHHHHHHHHcCCC-
Confidence 45689999999999999999999999999999999999999 6677788777 44666899999999999999998
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCcEEEE
Q 010820 451 PSEILFVTDVYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 451 p~~~l~VGDs~~Di~aA~~aG~~~i~v 477 (500)
|++|+||||+..|+++|+++||.+|+|
T Consensus 150 p~~~~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 150 PEEILFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp GGGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred cceEEEEeCCHHHHHHHHHcCCeEEeC
Confidence 999999999999999999999999986
|
... |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.8e-20 Score=212.21 Aligned_cols=203 Identities=16% Similarity=0.149 Sum_probs=140.8
Q ss_pred CCCCceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccc---cccCCCC
Q 010820 280 SGLFPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAG---AVPIPPG 354 (500)
Q Consensus 280 ~~~~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 354 (500)
..+++++|+|||||||+ |+...+ +++.+.+.++..+. .+.++...+......+.. .++....
T Consensus 71 ~~~~ikaVIFDlDGTLi------DS~~~~~~a~~~~~~~~G~~it-------~e~~~~~~G~~~~~~~~~~~~~~~l~~~ 137 (1057)
T PLN02919 71 EWGKVSAVLFDMDGVLC------NSEEPSRRAAVDVFAEMGVEVT-------VEDFVPFMGTGEANFLGGVASVKGVKGF 137 (1057)
T ss_pred cCCCCCEEEECCCCCeE------eChHHHHHHHHHHHHHcCCCCC-------HHHHHHHhCCCHHHHHHHHHHhcCCCCC
Confidence 45678999999999999 655444 55555555555422 112233333322222211 1111100
Q ss_pred CCChhhHHHHHHhhccc---CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccc-ccccccc--cc
Q 010820 355 DAGKEEGHIWRTGFESN---ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR-KYLSGFF--DT 428 (500)
Q Consensus 355 ~~~~~~~~~~~~~~~~~---~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~-~~f~~~~--d~ 428 (500)
. .......+.+.|... .....++||+.++|++|+++|++++|+||+....+...++++ ++. .+|+.++ +.
T Consensus 138 ~-~~~~~~~~~~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~---gl~~~~Fd~iv~~~~ 213 (1057)
T PLN02919 138 D-PDAAKKRFFEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAA---GLPLSMFDAIVSADA 213 (1057)
T ss_pred C-HHHHHHHHHHHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHc---CCChhHCCEEEECcc
Confidence 1 111111222222211 112357999999999999999999999999999999999999 554 5677777 44
Q ss_pred cccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCC-CceeeCCccCC
Q 010820 429 AVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENH-GFKTINSFAEI 500 (500)
Q Consensus 429 ~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~-~~~~i~~l~el 500 (500)
....||+|++|+.++++++++ |++|+||||+..|+++|+++||++|++.++.....+... ++++++++.|+
T Consensus 214 ~~~~KP~Pe~~~~a~~~lgv~-p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el 285 (1057)
T PLN02919 214 FENLKPAPDIFLAAAKILGVP-TSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNI 285 (1057)
T ss_pred cccCCCCHHHHHHHHHHcCcC-cccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHC
Confidence 567899999999999999998 999999999999999999999999999998554444333 38999999875
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.1e-20 Score=170.00 Aligned_cols=97 Identities=25% Similarity=0.389 Sum_probs=86.8
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--ccccc----CCCCHHHHHHHHHHcC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVG----NKRETPSYVEITNSLG 447 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~----~KP~p~~~~~~l~~l~ 447 (500)
...++||+.++|++|+ ++++|+||++...+...++.+ ++.++|+.++ +.... .||+|++|+.++++++
T Consensus 82 ~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~---gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~ 155 (184)
T TIGR01993 82 KLKPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRL---GIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAG 155 (184)
T ss_pred hCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHc---CcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhC
Confidence 3579999999999997 479999999999999999999 6778888777 33333 4999999999999999
Q ss_pred CCCCCcEEEEeCCHhhHHHHHHcCCcEEEE
Q 010820 448 VDKPSEILFVTDVYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 448 v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v 477 (500)
++ |++|+||||+..|+++|+++|+++|+|
T Consensus 156 ~~-~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 156 VD-PERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred CC-ccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 98 999999999999999999999999875
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.7e-20 Score=173.14 Aligned_cols=118 Identities=16% Similarity=0.205 Sum_probs=93.0
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccc---cccCCCCHHHHHHHHHHcCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT---AVGNKRETPSYVEITNSLGVDK 450 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~---~~~~KP~p~~~~~~l~~l~v~~ 450 (500)
...++||+.++|+.|++. ++++++||+........++.+ ++..+|..+|+. ....||+|++|..++++++
T Consensus 72 ~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~~---~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--- 144 (197)
T PHA02597 72 YLSAYDDALDVINKLKED-YDFVAVTALGDSIDALLNRQF---NLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--- 144 (197)
T ss_pred hccCCCCHHHHHHHHHhc-CCEEEEeCCccchhHHHHhhC---CHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC---
Confidence 357999999999999987 568899998887777777777 455555444421 2235889999999999999
Q ss_pred CCcEEEEeCCHhhHHHHHHc--CCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 451 PSEILFVTDVYQEATAAKAA--GLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 451 p~~~l~VGDs~~Di~aA~~a--G~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
|++|+||||+..|+++|+++ ||++|+++|+.. ......++.|+++.||
T Consensus 145 ~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~--~~~~~~~~~~~~~~~~ 194 (197)
T PHA02597 145 DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGER--DHIPKLAHRVKSWNDI 194 (197)
T ss_pred CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchhh--ccccchhhhhccHHHH
Confidence 57899999999999999999 999999998843 2222336888888764
|
2 hypothetical protein; Provisional |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.5e-19 Score=165.86 Aligned_cols=98 Identities=26% Similarity=0.338 Sum_probs=88.3
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
.+++||+.++|+.|+++|++++|+||+.... ..+++++ ++..+|+.++ +.....||+|++|.+++++++++ |+
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~---~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~-~~ 158 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQEL---GLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLK-PE 158 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhc---CCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCC-cc
Confidence 5799999999999999999999999999888 6666667 6777888776 34567899999999999999998 99
Q ss_pred cEEEEeCCHhhHHHHHHcCCcEEEE
Q 010820 453 EILFVTDVYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 453 ~~l~VGDs~~Di~aA~~aG~~~i~v 477 (500)
+|+||||+..|+++|+++|+.+|++
T Consensus 159 ~~~~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 159 ECLFVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred eEEEEcCCHHHHHHHHHcCCEEEeC
Confidence 9999999999999999999999975
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.6e-20 Score=174.04 Aligned_cols=124 Identities=17% Similarity=0.233 Sum_probs=100.2
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--c--ccccCCCCHHHHHHHHHHcC--
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--D--TAVGNKRETPSYVEITNSLG-- 447 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d--~~~~~KP~p~~~~~~l~~l~-- 447 (500)
...++||+.++|+.|+++|++++|+||+.+......+.... ++.++|+.++ + .....||+|++|..++++++
T Consensus 76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~--~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~ 153 (220)
T PLN02811 76 TSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHG--ELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDG 153 (220)
T ss_pred hCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccH--HHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCC
Confidence 46789999999999999999999999998765554333221 5567777666 4 45567999999999999997
Q ss_pred -CCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 448 -VDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 448 -v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
++ |++|+||||+..|+++|+++|+.+|++.++.........++++++++.||
T Consensus 154 ~~~-~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~ 206 (220)
T PLN02811 154 PVD-PGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDF 206 (220)
T ss_pred CCC-ccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhC
Confidence 98 99999999999999999999999999988743322223348899998775
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.6e-20 Score=172.02 Aligned_cols=103 Identities=16% Similarity=0.166 Sum_probs=86.8
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHH--HHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLA--QRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVD 449 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~--~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~ 449 (500)
...++||+.++|+.|+++|++++|+||+.... ....+... ++..+|+.++ +.....||+|++|..++++++++
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~---~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~ 168 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPG---DIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVA 168 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhh---hhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCC
Confidence 45789999999999999999999999987543 22223333 5567788777 33456899999999999999998
Q ss_pred CCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 450 KPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 450 ~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
|++|+||||+..|+.+|+++||++|++.++
T Consensus 169 -~~~~l~i~D~~~di~aA~~aG~~~i~v~~~ 198 (211)
T TIGR02247 169 -PEECVFLDDLGSNLKPAAALGITTIKVSDE 198 (211)
T ss_pred -HHHeEEEcCCHHHHHHHHHcCCEEEEECCH
Confidence 999999999999999999999999999864
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.9e-19 Score=167.78 Aligned_cols=102 Identities=18% Similarity=0.258 Sum_probs=89.3
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCCc
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSE 453 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~~ 453 (500)
.++||+.++|+.|+++|++++|+||++.......+.... ++..+|+.++ +.....||+|++|+.++++++++ |++
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~--~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~-p~~ 160 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYP--EVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFS-AAD 160 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhch--hHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCC-hhH
Confidence 589999999999999999999999999887666554331 4567788777 44677899999999999999998 999
Q ss_pred EEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 454 ILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 454 ~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
|+||||+..|+++|+++||+++++.++
T Consensus 161 ~l~vgD~~~di~aA~~aG~~~i~~~~~ 187 (199)
T PRK09456 161 AVFFDDNADNIEAANALGITSILVTDK 187 (199)
T ss_pred eEEeCCCHHHHHHHHHcCCEEEEecCC
Confidence 999999999999999999999999875
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.1e-19 Score=164.54 Aligned_cols=90 Identities=13% Similarity=0.166 Sum_probs=80.4
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCCc
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSE 453 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~~ 453 (500)
.+.+++.++|+.|+++|++++|+||++...+..+++.+ ++..+|+.++ +.... ||+|++|..++++++++ |++
T Consensus 106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~---gl~~~f~~~~~~~~~~~-KP~p~~~~~~~~~~~~~-~~~ 180 (197)
T TIGR01548 106 ETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTH---GLEILFPVQIWMEDCPP-KPNPEPLILAAKALGVE-ACH 180 (197)
T ss_pred ccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHc---CchhhCCEEEeecCCCC-CcCHHHHHHHHHHhCcC-ccc
Confidence 45667799999999999999999999999999999999 6778887666 33344 99999999999999998 999
Q ss_pred EEEEeCCHhhHHHHHHc
Q 010820 454 ILFVTDVYQEATAAKAA 470 (500)
Q Consensus 454 ~l~VGDs~~Di~aA~~a 470 (500)
|+||||+.+|+++|+++
T Consensus 181 ~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 181 AAMVGDTVDDIITGRKA 197 (197)
T ss_pred EEEEeCCHHHHHHHHhC
Confidence 99999999999999875
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.6e-19 Score=163.31 Aligned_cols=123 Identities=17% Similarity=0.150 Sum_probs=93.5
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcH---------------HHHHHHHhccCcccccccccccc---------ccccc
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSR---------------LAQRLIFGNSNYGDLRKYLSGFF---------DTAVG 431 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~---------------~~~~~~l~~~~~~~l~~~f~~~~---------d~~~~ 431 (500)
.++||+.++|++|+++|++++|+||.+. ......++.+++. +...+.+.. +....
T Consensus 26 ~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~ 104 (176)
T TIGR00213 26 EFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD-LDGIYYCPHHPEGVEEFRQVCDC 104 (176)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC-ccEEEECCCCCcccccccCCCCC
Confidence 4899999999999999999999999884 3334455554321 112111110 12335
Q ss_pred CCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcE-EEEcCCCCCCCCC-CCCceeeCCccCC
Q 010820 432 NKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV-VISIRPGNGPLPE-NHGFKTINSFAEI 500 (500)
Q Consensus 432 ~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~-i~v~~~~~~~~~~-~~~~~~i~~l~el 500 (500)
+||+|++|.+++++++++ |++|+||||+..|+++|+++|+.+ +++.++....... ..++++|+++.||
T Consensus 105 ~KP~p~~~~~a~~~~~~~-~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 105 RKPKPGMLLQARKELHID-MAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred CCCCHHHHHHHHHHcCcC-hhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence 799999999999999998 999999999999999999999998 7998874433323 2359999999875
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.9e-19 Score=161.80 Aligned_cols=119 Identities=19% Similarity=0.207 Sum_probs=92.7
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcH---------------HHHHHHHhccCcccccccccccc-------cccccCC
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSR---------------LAQRLIFGNSNYGDLRKYLSGFF-------DTAVGNK 433 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~---------------~~~~~~l~~~~~~~l~~~f~~~~-------d~~~~~K 433 (500)
.++||+.++|++|+++|++++|+||+.. ......+++++ + .|+.++ +.....|
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g---~--~f~~i~~~~~~~~~~~~~~K 103 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRG---G--RLDGIYYCPHHPEDGCDCRK 103 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcC---C--ccceEEECCCCCCCCCcCCC
Confidence 5899999999999999999999999863 23344555553 2 244433 1235689
Q ss_pred CCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCC-CCCC--ceeeCCccCC
Q 010820 434 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLP-ENHG--FKTINSFAEI 500 (500)
Q Consensus 434 P~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~-~~~~--~~~i~~l~el 500 (500)
|+|++|..++++++++ |++|+||||+.+|+.+|+++|+.++++.++...... ...+ +++++++.||
T Consensus 104 P~p~~~~~~~~~l~~~-~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el 172 (181)
T PRK08942 104 PKPGMLLSIAERLNID-LAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADL 172 (181)
T ss_pred CCHHHHHHHHHHcCCC-hhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHH
Confidence 9999999999999998 999999999999999999999999999876432222 2233 7889888664
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.1e-19 Score=159.70 Aligned_cols=121 Identities=11% Similarity=0.087 Sum_probs=94.1
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHH--------HHHHHHhccCcccccccccccc---cccccCCCCHHHHHHHHH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRL--------AQRLIFGNSNYGDLRKYLSGFF---DTAVGNKRETPSYVEITN 444 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~--------~~~~~l~~~~~~~l~~~f~~~~---d~~~~~KP~p~~~~~~l~ 444 (500)
.++||+.++|++|+++|++++|+||+... .....++.+ ++.++|.... +.....||+|++|.++++
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~---g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~ 104 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGF---GFDDIYLCPHKHGDGCECRKPSTGMLLQAAE 104 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhC---CcCEEEECcCCCCCCCCCCCCCHHHHHHHHH
Confidence 48999999999999999999999998742 123335555 4555544332 224568999999999999
Q ss_pred HcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCC-------CCCC-CCCceeeCCccCC
Q 010820 445 SLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNG-------PLPE-NHGFKTINSFAEI 500 (500)
Q Consensus 445 ~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~-------~~~~-~~~~~~i~~l~el 500 (500)
+++++ |++|+||||+..|+++|+++|+.+|++.++... +.+. ..++++++++.||
T Consensus 105 ~l~~~-p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el 167 (173)
T PRK06769 105 KHGLD-LTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDA 167 (173)
T ss_pred HcCCC-HHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHH
Confidence 99998 999999999999999999999999999987422 1122 2348888888764
|
|
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.3e-18 Score=158.56 Aligned_cols=207 Identities=18% Similarity=0.186 Sum_probs=143.6
Q ss_pred CCCCceEEEEecCCcccccccccccchHhHHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCC-h
Q 010820 280 SGLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAG-K 358 (500)
Q Consensus 280 ~~~~~k~vlFD~DGTL~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 358 (500)
....+.+++||+||||+|+ +..+..+++.+...++..+.+ +......|....+..+.++....+... +
T Consensus 6 ~~~~~~~~lfD~dG~lvdt----e~~y~~~~~~~~~~ygk~~~~-------~~~~~~mG~~~~eaa~~~~~~~~dp~s~e 74 (222)
T KOG2914|consen 6 LSLKVSACLFDMDGTLVDT----EDLYTEAWQELLDRYGKPYPW-------DVKVKSMGKRTSEAARLFVKKLPDPVSRE 74 (222)
T ss_pred cccceeeEEEecCCcEEec----HHHHHHHHHHHHHHcCCCChH-------HHHHHHcCCCHHHHHHHHHhhcCCCCCHH
Confidence 3456789999999999943 222233677777777765332 222224444444444443311111111 1
Q ss_pred hhHHHHHHhhcccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc----cccccCCC
Q 010820 359 EEGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF----DTAVGNKR 434 (500)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~----d~~~~~KP 434 (500)
+......+..........+.||+.++++.|+.+|++++++|+..+.....++++++ ++...|.... ..+..+||
T Consensus 75 e~~~e~~~~~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~--~~~~~f~~~v~~d~~~v~~gKP 152 (222)
T KOG2914|consen 75 EFNKEEEEILDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHE--DIFKNFSHVVLGDDPEVKNGKP 152 (222)
T ss_pred HHHHHHHHHHHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhh--HHHHhcCCCeecCCccccCCCC
Confidence 11222233333445567899999999999999999999999999999999998884 4566666555 22566799
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccC
Q 010820 435 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE 499 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e 499 (500)
+|++|..++++++..+|+.||+++|++..+++|+++||++|++.............+.+++++.+
T Consensus 153 ~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~~~~~~ 217 (222)
T KOG2914|consen 153 DPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLILESLED 217 (222)
T ss_pred CchHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceecccccc
Confidence 99999999999999833999999999999999999999999999854444444445777777654
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.3e-18 Score=153.80 Aligned_cols=104 Identities=21% Similarity=0.187 Sum_probs=84.4
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcH---------------HHHHHHHhccCcccccccccccc--cccccCCCCHHH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSR---------------LAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPS 438 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~---------------~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~ 438 (500)
.++||+.++|+.|+++|++++|+||+.. ......++++++.....++...+ +.....||+|++
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~~~ 106 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKPGL 106 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCHHH
Confidence 4899999999999999999999999873 45666777774321112222222 223456999999
Q ss_pred HHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 439 YVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 439 ~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
|+.++++++++ |++|+||||+..|+++|+++||.+||++++
T Consensus 107 ~~~~~~~~~~~-~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 107 ILEALKRLGVD-ASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHcCCC-hHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 99999999998 999999999999999999999999999875
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >COG3347 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.8e-18 Score=165.00 Aligned_cols=195 Identities=15% Similarity=0.136 Sum_probs=148.0
Q ss_pred HHHHHHHHHHH-HcCCccccCCceeEEeCCCCC-CCCccEEEEecCCCCcCCCCCCCEEEEeCCCC--c-ccC-------
Q 010820 32 VLISELCRHFY-TLGWVSGTGGSITIKVHDDSI-PKPQQLILMSPSGVQKERMEPEDMYVLSGNGT--T-LSS------- 99 (500)
Q Consensus 32 ~~l~~~~r~l~-~~gl~~~~~GniS~R~~~~~~-~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~--~-~~g------- 99 (500)
.+++...|.+- +..++.+.|||.|+++.+... +++-+.+||+.||.+++.++.+.++-|.++.- . ..+
T Consensus 18 ~~lvY~S~liGsdp~lv~~GGGNTS~K~~~~dl~G~~v~vmwVKgSG~dl~ti~~~gf~~v~l~~Ll~l~~~~~~~d~eM 97 (404)
T COG3347 18 ELLVYRSRLIGSDPDLVLHGGGNTSVKTGETDLVGEEVEVLWVKGSGWDLATIKADGFVPVRLDPLLALKKLDKLPDEEM 97 (404)
T ss_pred HHHHHHHhhhcCChhheecCCCccceeeeccccCCceeEEEEEeccccchhhhccCCCcccchHhHHHHHhcCCCCHHHH
Confidence 34555555553 346888999999999976422 44556899999999999999999988876520 0 000
Q ss_pred ------CCCCCCCCCCCCCCCChHHHHHHHhhCCccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcce
Q 010820 100 ------PSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELV 173 (500)
Q Consensus 100 ------~~~~p~~~~p~~~S~e~~~H~~iy~~~~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 173 (500)
....|+.. ++|.|+.+|..+ ..+.|.|+|+..++++++.... .+.++.+.|. .
T Consensus 98 V~~l~~~~~n~~~P---rPSIET~LHAfl----P~k~VdHtH~dAiiaIa~~~n~--------~~l~~~I~Gd------~ 156 (404)
T COG3347 98 VGYLRHCMLNPSAP---RPSIETLLHAFL----PFKVVDHTHADAIIAIAVQANG--------KALIREIFGD------R 156 (404)
T ss_pred HHHHHHhhcCCCCC---CcchhhhhHhhc----CcccccccCccceeeeccCCCH--------HHHHHHhcCC------e
Confidence 11122212 349999999998 9999999999999999887431 2233444453 4
Q ss_pred eeeeeCCCCchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Q 010820 174 VPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNH 249 (500)
Q Consensus 174 vp~~~~~~~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~ 249 (500)
+.++||....-+|+..+++.++.+|+..+++|.|||+++||+|.++||+++..+-.-|+-++..+ |++...+..
T Consensus 157 ~~~vPYvrPGf~La~~iae~~~~~p~~~glvL~~HGL~t~gdtak~~Ye~~I~~V~~Ae~~l~~~--~g~~~~~~a 230 (404)
T COG3347 157 VVWVPYVRPGFPLAKAIAERFKANPDAEGLVLENHGLFTFGDTAKEAYERMISIVNEAEEYLARR--GGKVAKSLA 230 (404)
T ss_pred EEEEeccCCCchHHHHHHHHHhhCCCceEEEeccccceEecccHHHHHHHHHHHHHHHHHHHHhh--CCcccccCC
Confidence 88899977778899999999999999999999999999999999999999999999999888776 444433333
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=99.76 E-value=8.5e-18 Score=149.88 Aligned_cols=91 Identities=30% Similarity=0.438 Sum_probs=79.3
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
....+||+.++|+.|+++|++++|+||+.+..+...++.+ +..+|+.++ +... .||+|++|.+++++++++ |
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~----l~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~-~ 135 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH----LGDYFDLILGSDEFG-AKPEPEIFLAALESLGLP-P 135 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH----HHhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCC-C
Confidence 3457799999999999999999999999999999998774 245565555 3344 899999999999999998 8
Q ss_pred CcEEEEeCCHhhHHHHHHcC
Q 010820 452 SEILFVTDVYQEATAAKAAG 471 (500)
Q Consensus 452 ~~~l~VGDs~~Di~aA~~aG 471 (500)
+|+||||+..|+++|+++|
T Consensus 136 -~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 136 -EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred -CEEEEeCCHHHHHHHHHcc
Confidence 9999999999999999987
|
HAD subfamilies caused by an overly broad single model. |
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-17 Score=155.34 Aligned_cols=101 Identities=20% Similarity=0.246 Sum_probs=89.9
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccccccccc--ccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFD--TAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d--~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
-...+++.++|+.||++|..++++||...... ..+..+ ++..+||.++. ..+..||+|.+|+.+++++++. |+
T Consensus 112 ~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~---~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~-Pe 186 (237)
T KOG3085|consen 112 WKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLLLPL---GLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVK-PE 186 (237)
T ss_pred ceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHhhcc---CHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCC-hH
Confidence 35668899999999999999999999888777 667777 67788888883 3677899999999999999998 99
Q ss_pred cEEEEeCCH-hhHHHHHHcCCcEEEEcCC
Q 010820 453 EILFVTDVY-QEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 453 ~~l~VGDs~-~Di~aA~~aG~~~i~v~~~ 480 (500)
+|+||||+. +|+++|+++||+++.|...
T Consensus 187 e~vhIgD~l~nD~~gA~~~G~~ailv~~~ 215 (237)
T KOG3085|consen 187 ECVHIGDLLENDYEGARNLGWHAILVDNS 215 (237)
T ss_pred HeEEecCccccccHhHHHcCCEEEEEccc
Confidence 999999998 8999999999999999865
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.74 E-value=2e-17 Score=156.54 Aligned_cols=114 Identities=18% Similarity=0.204 Sum_probs=89.5
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc------------cccccCCCCHHHHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF------------DTAVGNKRETPSYVEI 442 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~------------d~~~~~KP~p~~~~~~ 442 (500)
.+++||+.++|+.|+++|++++|+||+....+..+++.++ +..+|...+ ......+|+|.+|.++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 160 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLG---LDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLIL 160 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcC---CCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHH
Confidence 4699999999999999999999999999999999999984 444553221 0112346799999999
Q ss_pred HHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCC
Q 010820 443 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINS 496 (500)
Q Consensus 443 l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~ 496 (500)
+++++++ |++|+||||+.+|+++|+++|+..++ +. + +.....++++|.+
T Consensus 161 ~~~~~~~-~~~~i~iGDs~~Di~aa~~ag~~i~~-~~--~-~~~~~~a~~~i~~ 209 (219)
T TIGR00338 161 LRKEGIS-PENTVAVGDGANDLSMIKAAGLGIAF-NA--K-PKLQQKADICINK 209 (219)
T ss_pred HHHcCCC-HHHEEEEECCHHHHHHHHhCCCeEEe-CC--C-HHHHHhchhccCC
Confidence 9999998 99999999999999999999998643 21 2 2223344677664
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=99.74 E-value=1e-17 Score=145.45 Aligned_cols=98 Identities=22% Similarity=0.300 Sum_probs=83.9
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCc--------HHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHc-
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGS--------RLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSL- 446 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~--------~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l- 446 (500)
.++||+.++|+.|+++|++++|+||+. ...+...+++++ +..++. ++.. ...||+|++|+.+++++
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~---l~~~~~-~~~~-~~~KP~~~~~~~~~~~~~ 99 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELG---VPIDVL-YACP-HCRKPKPGMFLEALKRFN 99 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCC---CCEEEE-EECC-CCCCCChHHHHHHHHHcC
Confidence 489999999999999999999999999 788888998884 332221 2222 45799999999999999
Q ss_pred CCCCCCcEEEEeC-CHhhHHHHHHcCCcEEEEcC
Q 010820 447 GVDKPSEILFVTD-VYQEATAAKAAGLEVVISIR 479 (500)
Q Consensus 447 ~v~~p~~~l~VGD-s~~Di~aA~~aG~~~i~v~~ 479 (500)
+++ |++++|||| +..|+.+|+++|+.+|++++
T Consensus 100 ~~~-~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~~ 132 (132)
T TIGR01662 100 EID-PEESVYVGDQDLTDLQAAKRAGLAFILVAP 132 (132)
T ss_pred CCC-hhheEEEcCCCcccHHHHHHCCCeEEEeeC
Confidence 598 999999999 68999999999999999874
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.74 E-value=6.4e-17 Score=145.52 Aligned_cols=216 Identities=48% Similarity=0.777 Sum_probs=183.4
Q ss_pred CCceEEEEecCCcccccccccccchHhHHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccC----------
Q 010820 282 LFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPI---------- 351 (500)
Q Consensus 282 ~~~k~vlFD~DGTL~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 351 (500)
.+.+.++.|+.||...+.++.|.+|+++.+++.+++..+|..+..+.....++....... +......++
T Consensus 6 ~~~k~~llDIegttt~isfVkd~LFpya~~nV~~~v~~~~~~~~~~~iv~~l~~~~~e~~-~~~~~~v~i~~~~~~~e~~ 84 (254)
T KOG2630|consen 6 RKWKELLLDIEGTTTSISFVKDVLFPYAKENVEELVQEPYETKIGQEIVSELRQRPEEQL-GSTNNIVPITDVTAAEEAD 84 (254)
T ss_pred hhhhhheEeEEeeecchHHHHHhhhHHHHHHHHHHhcCccccchHHHHHHHHhhhHHHHh-ccccCcccccccchhhhhh
Confidence 457899999999999999999999999999999999999988777777777776655444 111111111
Q ss_pred ------------CCC-CCChh-hHHHHHHhhcccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccc
Q 010820 352 ------------PPG-DAGKE-EGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGD 417 (500)
Q Consensus 352 ------------~~~-~~~~~-~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~ 417 (500)
+.. ...+. ++..|...|..+..+.+.|+++.+.++.++..|++++|.|+++...+..+..+.+-++
T Consensus 85 v~v~~v~~~~~~d~k~t~~K~lQg~iw~~gy~sg~lk~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gd 164 (254)
T KOG2630|consen 85 VHVANVEKLISFDEKRTILKQLQGRIWAAGYESGELKAHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGD 164 (254)
T ss_pred hHHHHHHHHHhhhcccchhHHHHHHHHHhhcccccccccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcch
Confidence 111 11111 1899999999999999999999999999999999999999999999999999999899
Q ss_pred ccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCC--ceeeC
Q 010820 418 LRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHG--FKTIN 495 (500)
Q Consensus 418 l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~--~~~i~ 495 (500)
+..+++++||...+.|-....|..|.+.++.+ +++++|.-|.+.-..+|+.+|+.+.++.|+++.+....+. .-++.
T Consensus 165 l~~y~~gyfDt~iG~K~e~~sy~~I~~~Ig~s-~~eiLfLTd~~~Ea~aa~~aGl~a~l~~rPgna~l~dd~~~~y~~i~ 243 (254)
T KOG2630|consen 165 LRKYISGYFDTTIGLKVESQSYKKIGHLIGKS-PREILFLTDVPREAAAARKAGLQAGLVSRPGNAPLPDDAKVEYCVIW 243 (254)
T ss_pred HHHHhhhhhhccccceehhHHHHHHHHHhCCC-hhheEEeccChHHHHHHHhcccceeeeecCCCCCCCcccccceeeec
Confidence 99999999999888899999999999999998 9999999999999999999999999999999988777765 66677
Q ss_pred CccC
Q 010820 496 SFAE 499 (500)
Q Consensus 496 ~l~e 499 (500)
+|..
T Consensus 244 ~F~~ 247 (254)
T KOG2630|consen 244 SFEI 247 (254)
T ss_pred cchh
Confidence 7654
|
|
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.5e-18 Score=158.24 Aligned_cols=86 Identities=23% Similarity=0.290 Sum_probs=76.9
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
...++||+.++|+ +++|+||++...+...++++ ++..+|+.++ +.....||+|++|+.+++++|++ |
T Consensus 88 ~~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~---~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~-p 156 (175)
T TIGR01493 88 NLPPWPDSAAALA-------RVAILSNASHWAFDQFAQQA---GLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLP-P 156 (175)
T ss_pred cCCCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHC---CCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCC-H
Confidence 4569999999998 38999999999999999999 6788888776 44567899999999999999998 9
Q ss_pred CcEEEEeCCHhhHHHHHHc
Q 010820 452 SEILFVTDVYQEATAAKAA 470 (500)
Q Consensus 452 ~~~l~VGDs~~Di~aA~~a 470 (500)
++|+||||+..|+.+|+++
T Consensus 157 ~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 157 DRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHeEeEecChhhHHHHhcC
Confidence 9999999999999999864
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.6e-17 Score=155.25 Aligned_cols=122 Identities=16% Similarity=0.206 Sum_probs=91.2
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccc--------cc---cc---cccCCCCHHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSG--------FF---DT---AVGNKRETPSYV 440 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~--------~~---d~---~~~~KP~p~~~~ 440 (500)
..++||+.++|+.|+++|++++|+||+....+..+++.+++.. ..+|.. ++ +. ....+|+|+++.
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~-~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~ 161 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPP-ENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQ 161 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCCh-hhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHH
Confidence 4589999999999999999999999999999999999985421 123321 11 00 123577899999
Q ss_pred HHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCC-CCCCCCCceeeCCccCC
Q 010820 441 EITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNG-PLPENHGFKTINSFAEI 500 (500)
Q Consensus 441 ~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~-~~~~~~~~~~i~~l~el 500 (500)
+++++++. ++|+||||+.+|+.+|+++|+.++...+++.. +.....++++|+++.||
T Consensus 162 ~~~~~~~~---~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el 219 (224)
T PLN02954 162 HIKKKHGY---KTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDL 219 (224)
T ss_pred HHHHHcCC---CceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHH
Confidence 99999875 48999999999999999988887655443322 22222348999998764
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.3e-17 Score=145.62 Aligned_cols=99 Identities=14% Similarity=0.077 Sum_probs=85.6
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCC---------------cHHHHHHHHhccCcccccccccccc-------cccccCC
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSG---------------SRLAQRLIFGNSNYGDLRKYLSGFF-------DTAVGNK 433 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~---------------~~~~~~~~l~~~~~~~l~~~f~~~~-------d~~~~~K 433 (500)
+++||+.++|++|+++|++++|+||. ....+...++.+|+ . |+.++ +.....|
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl---~--fd~ii~~~~~~~~~~~~~K 103 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGI---I--FDDVLICPHFPDDNCDCRK 103 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCC---c--eeEEEECCCCCCCCCCCCC
Confidence 59999999999999999999999996 35567778888854 2 43222 3455679
Q ss_pred CCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 434 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 434 P~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
|+|++|..++++++++ |++|+||||+..|+++|+++||+++++.++
T Consensus 104 P~~~~~~~~~~~~~~~-~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~ 149 (161)
T TIGR01261 104 PKIKLLEPYLKKNLID-KARSYVIGDRETDMQLAENLGIRGIQYDEE 149 (161)
T ss_pred CCHHHHHHHHHHcCCC-HHHeEEEeCCHHHHHHHHHCCCeEEEEChh
Confidence 9999999999999998 999999999999999999999999999875
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.1e-17 Score=146.68 Aligned_cols=104 Identities=14% Similarity=0.111 Sum_probs=88.6
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCC-cHHHHHHHHhccCccccc---------ccccccc--cccccCCCCHHHHHH
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSG-SRLAQRLIFGNSNYGDLR---------KYLSGFF--DTAVGNKRETPSYVE 441 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~-~~~~~~~~l~~~~~~~l~---------~~f~~~~--d~~~~~KP~p~~~~~ 441 (500)
..++|||+.++|+.|+++|++++|+||+ ....+...++.+ ++. ++|+.++ +.....||.+.++..
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~---~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~ 119 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTF---EITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQK 119 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhC---CcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHH
Confidence 4579999999999999999999999998 888989999988 455 7777766 333345667777777
Q ss_pred HHHHc--CCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCC
Q 010820 442 ITNSL--GVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPG 481 (500)
Q Consensus 442 ~l~~l--~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~ 481 (500)
+.+++ +++ |++|+||||++.|+++|+++|+.++++.++.
T Consensus 120 ~~~~~~~gl~-p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~ 160 (174)
T TIGR01685 120 VNKVDPSVLK-PAQILFFDDRTDNVREVWGYGVTSCYCPSGM 160 (174)
T ss_pred hhhcccCCCC-HHHeEEEcChhHhHHHHHHhCCEEEEcCCCc
Confidence 77777 798 9999999999999999999999999998764
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.7e-16 Score=144.90 Aligned_cols=103 Identities=14% Similarity=0.042 Sum_probs=84.1
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccC----------CCCHHHHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGN----------KRETPSYVEI 442 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~----------KP~p~~~~~~ 442 (500)
.+++||+.++|+.|+++|++++|+||+....+..+++.+ ++..+|...+ +..+.. +++++.+.++
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~---g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~ 155 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKL---NPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERL 155 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHh---CCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHH
Confidence 469999999999999999999999999999999999998 4455554333 111111 3344789999
Q ss_pred HHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCC
Q 010820 443 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPG 481 (500)
Q Consensus 443 l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~ 481 (500)
+++++++ +++|+||||+.+|+.+|+.+|+.++....+.
T Consensus 156 ~~~~~~~-~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~ 193 (201)
T TIGR01491 156 KRELNPS-LTETVAVGDSKNDLPMFEVADISISLGDEGH 193 (201)
T ss_pred HHHhCCC-HHHEEEEcCCHhHHHHHHhcCCeEEECCCcc
Confidence 9999998 9999999999999999999999887765543
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.67 E-value=8.8e-16 Score=137.46 Aligned_cols=186 Identities=16% Similarity=0.207 Sum_probs=130.4
Q ss_pred CCCCceEEEEecCCcccccccccccchHhHHhhhhhhhcccc--CchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCC
Q 010820 280 SGLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTY--DTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAG 357 (500)
Q Consensus 280 ~~~~~k~vlFD~DGTL~~~~~~~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (500)
+.+++++++||+|+||+..+ ........+.+.+++-... .+.+.......+...+|.............+
T Consensus 11 ~~~~~~~l~FDiDdtLYp~S---t~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~~~~~~~d----- 82 (244)
T KOG3109|consen 11 SGPNYKCLFFDIDDTLYPLS---TGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLKAVGYIFD----- 82 (244)
T ss_pred CCccceEEEEecccccccCc---hhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHHHhcccCC-----
Confidence 44589999999999999654 3333334444444443322 2333344455555555555554333222111
Q ss_pred hhhHHHHHHhhccc-C-cccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--c------
Q 010820 358 KEEGHIWRTGFESN-E-LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--D------ 427 (500)
Q Consensus 358 ~~~~~~~~~~~~~~-~-~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d------ 427 (500)
...|.++.... + ...+|-+-.+++|-.|+.++ ..+.||+.+..+.++++++ |+.+.|+++. +
T Consensus 83 ---~deY~~~V~~~LPlq~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~L---GieDcFegii~~e~~np~~ 154 (244)
T KOG3109|consen 83 ---ADEYHRFVHGRLPLQDLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKL---GIEDCFEGIICFETLNPIE 154 (244)
T ss_pred ---HHHHHHHhhccCcHhhcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHh---ChHHhccceeEeeccCCCC
Confidence 11222222211 1 12567777899999998764 8999999999999999999 7788888777 2
Q ss_pred ccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCC
Q 010820 428 TAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPG 481 (500)
Q Consensus 428 ~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~ 481 (500)
.....||.+.+|+.+.+..|+.+|.+++|++||.++|++|++.||.++++.+..
T Consensus 155 ~~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~ 208 (244)
T KOG3109|consen 155 KTVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGREH 208 (244)
T ss_pred CceeecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEEeee
Confidence 234579999999999999999889999999999999999999999999997763
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.1e-16 Score=140.20 Aligned_cols=94 Identities=16% Similarity=0.264 Sum_probs=78.3
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHH------------HHHHHHhccCcccccccccccc--cccccCCCCHHHHHHH
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRL------------AQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEI 442 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~------------~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~ 442 (500)
+|||+.++|+.|+++|++++|+||++.. .+..++++++ +.. +.++ +.....||+|++|..+
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~g---l~~--~~ii~~~~~~~~KP~p~~~~~~ 117 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLK---VPI--QVLAATHAGLYRKPMTGMWEYL 117 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcC---CCE--EEEEecCCCCCCCCccHHHHHH
Confidence 7899999999999999999999998763 4677788884 322 1222 2234579999999999
Q ss_pred HHHcC--CCCCCcEEEEeCCH--------hhHHHHHHcCCcEEE
Q 010820 443 TNSLG--VDKPSEILFVTDVY--------QEATAAKAAGLEVVI 476 (500)
Q Consensus 443 l~~l~--v~~p~~~l~VGDs~--------~Di~aA~~aG~~~i~ 476 (500)
+++++ ++ |++++||||+. .|+++|+++|+.+++
T Consensus 118 ~~~~~~~~~-~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 118 QSQYNSPIK-MTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred HHHcCCCCC-chhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 99999 88 99999999996 699999999999875
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.8e-15 Score=142.85 Aligned_cols=95 Identities=13% Similarity=0.142 Sum_probs=76.7
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCC----cHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSG----SRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGV 448 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~----~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v 448 (500)
..+++++.++|+.|+++|++++++||. .......+++.+ ++..+|+.++ +.....||++. .+++++++
T Consensus 113 s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~l---Gi~~~f~~i~~~d~~~~~Kp~~~---~~l~~~~i 186 (237)
T TIGR01672 113 SIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNF---HIPAMNPVIFAGDKPGQYQYTKT---QWIQDKNI 186 (237)
T ss_pred CcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHh---CCchheeEEECCCCCCCCCCCHH---HHHHhCCC
Confidence 457788999999999999999999998 667888888889 5566676666 22333566654 35556554
Q ss_pred CCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 449 DKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 449 ~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
++||||+.+|+.+|+++|+.++.+.|+
T Consensus 187 -----~i~vGDs~~DI~aAk~AGi~~I~V~~g 213 (237)
T TIGR01672 187 -----RIHYGDSDNDITAAKEAGARGIRILRA 213 (237)
T ss_pred -----eEEEeCCHHHHHHHHHCCCCEEEEEec
Confidence 699999999999999999999999988
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.9e-15 Score=149.63 Aligned_cols=113 Identities=18% Similarity=0.197 Sum_probs=89.1
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccccc-------ccc-----cccccCCCCHHHHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS-------GFF-----DTAVGNKRETPSYVEI 442 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~-------~~~-----d~~~~~KP~p~~~~~~ 442 (500)
.+++||+.++|+.|+++|++++|+|++.......+.+++++ ...+. +.+ ......|||++.++++
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgl---d~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~l 256 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRL---DAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRL 256 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCC---CeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHH
Confidence 56999999999999999999999999999888888888843 32221 222 1123468999999999
Q ss_pred HHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeC
Q 010820 443 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTIN 495 (500)
Q Consensus 443 l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~ 495 (500)
++++|++ +++|++|||+.+|+.+++.+|+..++ + + .+.....+++.++
T Consensus 257 a~~lgi~-~~qtIaVGDg~NDl~m~~~AGlgiA~-n-A--kp~Vk~~Ad~~i~ 304 (322)
T PRK11133 257 AQEYEIP-LAQTVAIGDGANDLPMIKAAGLGIAY-H-A--KPKVNEQAQVTIR 304 (322)
T ss_pred HHHcCCC-hhhEEEEECCHHHHHHHHHCCCeEEe-C-C--CHHHHhhCCEEec
Confidence 9999998 99999999999999999999998887 2 1 2222333466665
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.8e-15 Score=133.62 Aligned_cols=96 Identities=11% Similarity=0.163 Sum_probs=81.8
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCc-HHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcE
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGS-RLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 454 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~-~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~ 454 (500)
.++||+.++|+.|+++|++++|+||++ ......+++.+ ++..++ ...||+|++|..++++++++ |++|
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~---gl~~~~-------~~~KP~p~~~~~~l~~~~~~-~~~~ 111 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKAL---GIPVLP-------HAVKPPGCAFRRAHPEMGLT-SEQV 111 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHc---CCEEEc-------CCCCCChHHHHHHHHHcCCC-HHHE
Confidence 378999999999999999999999998 56666666666 322211 23699999999999999998 9999
Q ss_pred EEEeCCH-hhHHHHHHcCCcEEEEcCCCC
Q 010820 455 LFVTDVY-QEATAAKAAGLEVVISIRPGN 482 (500)
Q Consensus 455 l~VGDs~-~Di~aA~~aG~~~i~v~~~~~ 482 (500)
+||||+. .|+.+|+++|+.+|++.++..
T Consensus 112 l~IGDs~~~Di~aA~~aGi~~i~v~~g~~ 140 (170)
T TIGR01668 112 AVVGDRLFTDVMGGNRNGSYTILVEPLVH 140 (170)
T ss_pred EEECCcchHHHHHHHHcCCeEEEEccCcC
Confidence 9999998 799999999999999998843
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.60 E-value=9.2e-15 Score=138.21 Aligned_cols=119 Identities=12% Similarity=0.051 Sum_probs=87.3
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccc--cccc--cccccCCCCHHH----------HH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL--SGFF--DTAVGNKRETPS----------YV 440 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f--~~~~--d~~~~~KP~p~~----------~~ 440 (500)
..++||+.++|+.|+++|++++|+||+....+..+++++ +.. ..++ +..+ +.....||+|.. ..
T Consensus 73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~-~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~ 150 (219)
T PRK09552 73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK-EQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKP 150 (219)
T ss_pred CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc-CcEEEeEEEecCCeeEEeccCCccccccccCCCchH
Confidence 579999999999999999999999999999999999876 422 1222 2223 223456887764 46
Q ss_pred HHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCC--CCCCCceeeCCccC
Q 010820 441 EITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPL--PENHGFKTINSFAE 499 (500)
Q Consensus 441 ~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~--~~~~~~~~i~~l~e 499 (500)
.++++++.. +.+|+||||+.+|+.+|+++|+.++ ++..... ....+.+.+++|.|
T Consensus 151 ~~l~~~~~~-~~~~i~iGDs~~Di~aa~~Ag~~~a---~~~l~~~~~~~~~~~~~~~~f~e 207 (219)
T PRK09552 151 SLIRKLSDT-NDFHIVIGDSITDLEAAKQADKVFA---RDFLITKCEELGIPYTPFETFHD 207 (219)
T ss_pred HHHHHhccC-CCCEEEEeCCHHHHHHHHHCCccee---HHHHHHHHHHcCCCccccCCHHH
Confidence 899999998 9999999999999999999999444 2211111 12223666677665
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.5e-15 Score=139.61 Aligned_cols=119 Identities=12% Similarity=0.078 Sum_probs=86.0
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--c-c---cccCCCCHHHHHHHHHHcC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--D-T---AVGNKRETPSYVEITNSLG 447 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d-~---~~~~KP~p~~~~~~l~~l~ 447 (500)
..+++||+.++|+.|+++ ++++|+||+....+...++++ ++..+|...+ + . ....+++|+....++++++
T Consensus 66 ~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~---gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~ 141 (205)
T PRK13582 66 TLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQL---GWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALK 141 (205)
T ss_pred hCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHc---CCchhhcceEEECCCCeEECccccccchHHHHHHHHH
Confidence 346899999999999999 999999999999999999999 4455554333 1 1 1112345556677788888
Q ss_pred CCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCc-eeeCCccCC
Q 010820 448 VDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGF-KTINSFAEI 500 (500)
Q Consensus 448 v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~-~~i~~l~el 500 (500)
.. +++|+||||+.+|+.+++++|+... +.+. . ......++ .+++++.||
T Consensus 142 ~~-~~~~v~iGDs~~D~~~~~aa~~~v~-~~~~-~-~~~~~~~~~~~~~~~~el 191 (205)
T PRK13582 142 SL-GYRVIAAGDSYNDTTMLGEADAGIL-FRPP-A-NVIAEFPQFPAVHTYDEL 191 (205)
T ss_pred Hh-CCeEEEEeCCHHHHHHHHhCCCCEE-ECCC-H-HHHHhCCcccccCCHHHH
Confidence 77 8999999999999999999998553 3322 1 11122233 378877654
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2e-14 Score=143.23 Aligned_cols=100 Identities=17% Similarity=0.137 Sum_probs=83.7
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCC---------------cHHHHHHHHhccCcccccccccccc-------cccccC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSG---------------SRLAQRLIFGNSNYGDLRKYLSGFF-------DTAVGN 432 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~---------------~~~~~~~~l~~~~~~~l~~~f~~~~-------d~~~~~ 432 (500)
..++||+.++|++|+++|++++|+||. .......+++.+++ . |+.++ +....+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl---~--fd~i~i~~~~~sd~~~~r 103 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGI---K--FDEVLICPHFPEDNCSCR 103 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCC---c--eeeEEEeCCcCcccCCCC
Confidence 469999999999999999999999995 34456667777743 1 33322 234567
Q ss_pred CCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 433 KRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 433 KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
||+|.+|..++++++++ |++++||||+.+|+++|+++||++|++++.
T Consensus 104 KP~p~~l~~a~~~l~v~-~~~svmIGDs~sDi~aAk~aGi~~I~v~~~ 150 (354)
T PRK05446 104 KPKTGLVEEYLAEGAID-LANSYVIGDRETDVQLAENMGIKGIRYARE 150 (354)
T ss_pred CCCHHHHHHHHHHcCCC-cccEEEEcCCHHHHHHHHHCCCeEEEEECC
Confidence 99999999999999998 999999999999999999999999999764
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.2e-14 Score=123.04 Aligned_cols=99 Identities=28% Similarity=0.339 Sum_probs=84.9
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccc--ccc----------------CCCCH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT--AVG----------------NKRET 436 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~--~~~----------------~KP~p 436 (500)
..+++++.++|+.|+++|++++++||+....++..++.+ ++..+++..+.. ... .||++
T Consensus 23 ~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (139)
T cd01427 23 LELYPGVKEALKELKEKGIKLALATNKSRREVLELLEEL---GLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNP 99 (139)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHc---CCchhhhheeccchhhhhcccccccccccccccCCCCH
Confidence 469999999999999999999999999999999999888 444445544411 111 29999
Q ss_pred HHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEE
Q 010820 437 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 437 ~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v 477 (500)
..+..++++++.+ +++++||||+.+|+++++++|+.++++
T Consensus 100 ~~~~~~~~~~~~~-~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 100 DKLLAALKLLGVD-PEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred HHHHHHHHHcCCC-hhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 9999999999997 999999999999999999999999875
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.8e-13 Score=115.99 Aligned_cols=92 Identities=13% Similarity=0.198 Sum_probs=80.4
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEEE
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILF 456 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~ 456 (500)
..|.+++-+.+++++|.++.|+||+...-+....+++++ +|+ ....||-+..|.+++++++++ |++|+|
T Consensus 47 ~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v----~fi------~~A~KP~~~~fr~Al~~m~l~-~~~vvm 115 (175)
T COG2179 47 ATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV----PFI------YRAKKPFGRAFRRALKEMNLP-PEEVVM 115 (175)
T ss_pred CCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC----cee------ecccCccHHHHHHHHHHcCCC-hhHEEE
Confidence 445577889999999999999999999999999988842 221 234799999999999999998 999999
Q ss_pred EeCCH-hhHHHHHHcCCcEEEEcC
Q 010820 457 VTDVY-QEATAAKAAGLEVVISIR 479 (500)
Q Consensus 457 VGDs~-~Di~aA~~aG~~~i~v~~ 479 (500)
|||.. .||.+++++||.+|.|..
T Consensus 116 VGDqL~TDVlggnr~G~~tIlV~P 139 (175)
T COG2179 116 VGDQLFTDVLGGNRAGMRTILVEP 139 (175)
T ss_pred EcchhhhhhhcccccCcEEEEEEE
Confidence 99998 999999999999999964
|
|
| >KOG3699 consensus Cytoskeletal protein Adducin [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.7e-13 Score=139.17 Aligned_cols=160 Identities=16% Similarity=0.188 Sum_probs=119.3
Q ss_pred CCcCCCCCCCEEEEeCCCCcccCCCCCCCCCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccc
Q 010820 77 VQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRIT 155 (500)
Q Consensus 77 ~~~~~l~~~di~~vd~~g~~~~g~~~~p~~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~ 155 (500)
..+.+++.+.++.|+..|++++-....-.++ .+.+.+|.+||.+| +++||||.|.+...|.+...+ ..+|++
T Consensus 87 ~~~he~tas~l~kv~~~g~iv~qgs~~~~vn-----~sgf~lhsai~~a~p~vrc~ihi~t~~~aavs~mk~--gllp~s 159 (598)
T KOG3699|consen 87 LLYHEITASSLVKVNIQGEIVDQGSTNLGVN-----QSGFFLHSAIYAARPDVRCIIHIHTSAVAAVSSMKC--GLLPLS 159 (598)
T ss_pred hhhhhcccccceeecccchhhhccccccccc-----ccccchhhhhhccCCceeEEEEeccchHHHHHHhhh--cccccc
Confidence 6778899999999999999996432322222 35799999999999 999999999999999998866 355655
Q ss_pred hhhHhhhhcCCcccCcceeeeeeCCCC--chhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHH
Q 010820 156 HMEMIKGIKGHGYYDELVVPIIENTAY--ENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDA 233 (500)
Q Consensus 156 ~~~~~~~~~g~~~~~~~~vp~~~~~~~--~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~ 233 (500)
+..+. + | .|.+++|.++ .++--..+...|+. . ++++|+|||++++|++++|||..+..+.-+|++
T Consensus 160 ~~a~~--l-g-------~~~~~dy~~~~e~~~~~~~~~~~lg~--~-kvl~lrN~g~~~~g~t~eeA~~~~~~~~~ace~ 226 (598)
T KOG3699|consen 160 QEALV--L-G-------EVAYYDYQGILEDEEERIPLQKNLGP--K-KVLVLRNHGVVSVGETVEEAFYYIFNLVLACEI 226 (598)
T ss_pred ccccc--c-c-------ceeeeecccccccchhhhhHHhhcCc--c-ceEEEecccccccchhHHHHHHHhhcchhhhhh
Confidence 54332 2 3 3777777653 22223334455554 3 999999999999999999999999999999999
Q ss_pred HHHHHhcCCC-CCCCCCCCccccc
Q 010820 234 AIKLHQLGLD-WSTPNHGPTRNFK 256 (500)
Q Consensus 234 ~~~a~~~g~~-~~~~~~~~~~~~~ 256 (500)
++.+..-|.. ..+++++..+...
T Consensus 227 qv~~~a~g~dnl~~~~~~~~~~~~ 250 (598)
T KOG3699|consen 227 QVSASAGGLDNLILLEEEKYKAIN 250 (598)
T ss_pred hhhhcccCccccccCcHhhhhhhh
Confidence 9996655543 4455555555444
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.6e-13 Score=123.90 Aligned_cols=93 Identities=9% Similarity=0.110 Sum_probs=75.7
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccc----------------------cccC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT----------------------AVGN 432 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~----------------------~~~~ 432 (500)
.+++||+.++|+.|+++|++++|+||+....+...++.+ ++..+|+.++.. ...+
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g 147 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGI---GEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCG 147 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHc---CChhheeEEeccCceECCCCcEEEecCCCCccCcCCCC
Confidence 579999999999999999999999999999999999998 556666655511 1122
Q ss_pred CCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcE
Q 010820 433 KRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV 474 (500)
Q Consensus 433 KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~ 474 (500)
.+|++++++..++. +++++||||+.+|+.+|+++++.+
T Consensus 148 ~~K~~~~~~~~~~~----~~~~i~iGD~~~D~~aa~~~d~~~ 185 (188)
T TIGR01489 148 CCKGKVIHKLSEPK----YQHIIYIGDGVTDVCPAKLSDVVF 185 (188)
T ss_pred CCHHHHHHHHHhhc----CceEEEECCCcchhchHhcCCccc
Confidence 34788888887764 578999999999999999987644
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.2e-13 Score=123.01 Aligned_cols=99 Identities=12% Similarity=0.117 Sum_probs=80.4
Q ss_pred HHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhh
Q 010820 384 ALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQE 463 (500)
Q Consensus 384 ~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~D 463 (500)
+|++|+++|++++|+||.....+...++.+ ++..+|+. .||+|+++.+++++++++ +++|+||||+.+|
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~---gi~~~~~~-------~~~k~~~~~~~~~~~~~~-~~~~~~vGDs~~D 104 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTL---GITHLYQG-------QSNKLIAFSDILEKLALA-PENVAYIGDDLID 104 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHc---CCCEEEec-------ccchHHHHHHHHHHcCCC-HHHEEEECCCHHH
Confidence 899999999999999999999999999888 45555542 389999999999999998 9999999999999
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCC
Q 010820 464 ATAAKAAGLEVVISIRPGNGPLPENHGFKTINS 496 (500)
Q Consensus 464 i~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~ 496 (500)
+.+++++|+. +.+..... .....+++++++
T Consensus 105 ~~~~~~ag~~-~~v~~~~~--~~~~~a~~i~~~ 134 (154)
T TIGR01670 105 WPVMEKVGLS-VAVADAHP--LLIPRADYVTRI 134 (154)
T ss_pred HHHHHHCCCe-EecCCcCH--HHHHhCCEEecC
Confidence 9999999997 55554422 122223566554
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.6e-13 Score=123.22 Aligned_cols=86 Identities=20% Similarity=0.288 Sum_probs=76.3
Q ss_pred HHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHh
Q 010820 383 EALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQ 462 (500)
Q Consensus 383 ~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~ 462 (500)
-.++.|+++|++++|+||.....++..++.+ ++..+|+. .||+|+.|..++++++++ +++|+||||+.+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~l---gi~~~f~~-------~kpkp~~~~~~~~~l~~~-~~ev~~iGD~~n 109 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEEL---KIKRFHEG-------IKKKTEPYAQMLEEMNIS-DAEVCYVGDDLV 109 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHC---CCcEEEec-------CCCCHHHHHHHHHHcCcC-HHHEEEECCCHH
Confidence 3678889999999999999999999999999 55555542 389999999999999998 999999999999
Q ss_pred hHHHHHHcCCcEEEEcC
Q 010820 463 EATAAKAAGLEVVISIR 479 (500)
Q Consensus 463 Di~aA~~aG~~~i~v~~ 479 (500)
|+.+++.+|+..+.-+-
T Consensus 110 Di~~~~~ag~~~am~nA 126 (169)
T TIGR02726 110 DLSMMKRVGLAVAVGDA 126 (169)
T ss_pred HHHHHHHCCCeEECcCc
Confidence 99999999998877654
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.4e-12 Score=121.58 Aligned_cols=97 Identities=11% Similarity=0.138 Sum_probs=75.4
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCc----HHHHHHHHhccCcccc--cccccccccccccCCCCHHHHHHHHHHcC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGS----RLAQRLIFGNSNYGDL--RKYLSGFFDTAVGNKRETPSYVEITNSLG 447 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~----~~~~~~~l~~~~~~~l--~~~f~~~~d~~~~~KP~p~~~~~~l~~l~ 447 (500)
...++||+.++|+.|+++|++++++||.. ......+++.+ ++ .++|...+......||++.. .+++++
T Consensus 112 ~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~---gip~~~~f~vil~gd~~~K~~K~~---~l~~~~ 185 (237)
T PRK11009 112 FSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDF---HIPADNMNPVIFAGDKPGQYTKTQ---WLKKKN 185 (237)
T ss_pred cCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHc---CCCcccceeEEEcCCCCCCCCHHH---HHHhcC
Confidence 46799999999999999999999999953 55777777767 45 45565555221235777653 445554
Q ss_pred CCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCC
Q 010820 448 VDKPSEILFVTDVYQEATAAKAAGLEVVISIRPG 481 (500)
Q Consensus 448 v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~ 481 (500)
+ ++||||+.+|+.+|+++|+.+|.+.|+.
T Consensus 186 i-----~I~IGDs~~Di~aA~~AGi~~I~v~~G~ 214 (237)
T PRK11009 186 I-----RIFYGDSDNDITAAREAGARGIRILRAA 214 (237)
T ss_pred C-----eEEEcCCHHHHHHHHHcCCcEEEEecCC
Confidence 3 7999999999999999999999999983
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.44 E-value=7.4e-13 Score=124.74 Aligned_cols=94 Identities=14% Similarity=0.115 Sum_probs=76.3
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccc---cccc--cccccCCCCHHHH----------
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL---SGFF--DTAVGNKRETPSY---------- 439 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f---~~~~--d~~~~~KP~p~~~---------- 439 (500)
.+++||+.++|+.|+++|++++|+|++....+..+++.++ ....+ +..+ +.....||+|..+
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~---~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K 145 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIV---EKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCK 145 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhC---CcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCH
Confidence 5799999999999999999999999999999999998762 22332 1222 2234468887775
Q ss_pred HHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCC
Q 010820 440 VEITNSLGVDKPSEILFVTDVYQEATAAKAAGL 472 (500)
Q Consensus 440 ~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~ 472 (500)
..++++++.. +++++||||+.+|+.+|+.+|+
T Consensus 146 ~~~l~~~~~~-~~~~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 146 PSLIRKLSEP-NDYHIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred HHHHHHHhhc-CCcEEEEeCCHHHHHHHHhCCe
Confidence 4788888887 8999999999999999999998
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.44 E-value=7.7e-13 Score=124.30 Aligned_cols=88 Identities=26% Similarity=0.331 Sum_probs=77.6
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccc--cccccccccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK--YLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~--~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
.+++|++.++|+.|+++|++++++|+........+.+.+ ++.+ .|...+ .||++.+|.+++++++++ ++
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~l---gi~~~~v~a~~~-----~kP~~k~~~~~i~~l~~~-~~ 196 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQL---GIFDSIVFARVI-----GKPEPKIFLRIIKELQVK-PG 196 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHT---TSCSEEEEESHE-----TTTHHHHHHHHHHHHTCT-GG
T ss_pred CcchhhhhhhhhhhhccCcceeeeecccccccccccccc---cccccccccccc-----ccccchhHHHHHHHHhcC-CC
Confidence 478999999999999999999999999999999999988 4433 222211 699999999999999998 99
Q ss_pred cEEEEeCCHhhHHHHHHcC
Q 010820 453 EILFVTDVYQEATAAKAAG 471 (500)
Q Consensus 453 ~~l~VGDs~~Di~aA~~aG 471 (500)
+|+||||+.||+.+++++|
T Consensus 197 ~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 197 EVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp GEEEEESSGGHHHHHHHSS
T ss_pred EEEEEccCHHHHHHHHhCc
Confidence 9999999999999999987
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.1e-12 Score=120.44 Aligned_cols=99 Identities=8% Similarity=0.108 Sum_probs=81.1
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc----c---------ccccCCCCHHHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF----D---------TAVGNKRETPSYVE 441 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~----d---------~~~~~KP~p~~~~~ 441 (500)
..++||+.++|+.++++|++++|+|++....++.+++.+++ ..+|..-+ + ....++++...++.
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~---~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~ 162 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGI---DNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAE 162 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCC---cceEecceEEcCCCEEeCCccCCCCCChHHHHHHHH
Confidence 46899999999999999999999999999999999998854 44443211 1 11234667788999
Q ss_pred HHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEE
Q 010820 442 ITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 442 ~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v 477 (500)
.+++.+++ +++|++|||+.+|+.+++.+|...+..
T Consensus 163 ~~~~~~~~-~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 163 LLAEEQID-LKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred HHHHcCCC-HHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 99999998 999999999999999999999876543
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=1e-12 Score=126.08 Aligned_cols=70 Identities=19% Similarity=0.079 Sum_probs=59.3
Q ss_pred ccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCH-hhHHHHHHcCCcEEEEcCCCCCC-CCC---CCCceeeCCccCC
Q 010820 430 VGNKRETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAAGLEVVISIRPGNGP-LPE---NHGFKTINSFAEI 500 (500)
Q Consensus 430 ~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~-~~~---~~~~~~i~~l~el 500 (500)
..+||+|++|..++++++++ |++|+||||+. .|+.+|+++|+.+++|.++.... ... ..++++++++.||
T Consensus 171 ~~gKP~~~~~~~~~~~~~~~-~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el 245 (248)
T PRK10444 171 YVGKPSPWIIRAALNKMQAH-SEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI 245 (248)
T ss_pred ccCCCCHHHHHHHHHHcCCC-cccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence 34699999999999999998 99999999997 89999999999999999884332 222 2359999998775
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.3e-12 Score=118.74 Aligned_cols=99 Identities=13% Similarity=0.049 Sum_probs=77.5
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccccc--------cccc-ccccCCCCHHHHHHHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS--------GFFD-TAVGNKRETPSYVEITNS 445 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~--------~~~d-~~~~~KP~p~~~~~~l~~ 445 (500)
.+++||+.++|+.|++.| +++|+||+....+..+++.+ ++..+|. +.+. .....||.+..+.+.+++
T Consensus 67 i~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~l---gi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~ 142 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQL---GFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKS 142 (203)
T ss_pred CCCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHc---CCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHh
Confidence 468999999999999975 99999999999999999999 4455554 2221 112346666666666655
Q ss_pred cCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCC
Q 010820 446 LGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPG 481 (500)
Q Consensus 446 l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~ 481 (500)
.+ .+|++|||+.+|+.+++.+|...++...+.
T Consensus 143 ~~----~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~ 174 (203)
T TIGR02137 143 LY----YRVIAAGDSYNDTTMLSEAHAGILFHAPEN 174 (203)
T ss_pred hC----CCEEEEeCCHHHHHHHHhCCCCEEecCCHH
Confidence 44 379999999999999999999999987763
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=99.35 E-value=7.6e-13 Score=127.41 Aligned_cols=121 Identities=17% Similarity=0.127 Sum_probs=84.3
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCCcE
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSEI 454 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~~~ 454 (500)
.|+.+..++..|+ +|.+ .++||.+.......--..+-+.+...+.... +....+||+|++|..++++++++ ++++
T Consensus 122 ~y~~l~~a~~~l~-~g~~-~i~tN~D~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~-~~~~ 198 (249)
T TIGR01457 122 DYEKFATATLAIR-KGAH-FIGTNGDLAIPTERGLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTE-REET 198 (249)
T ss_pred CHHHHHHHHHHHH-CCCe-EEEECCCCCCCCCCCCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCC-cccE
Confidence 4556666777774 5776 8899977654422100111112223333222 23445799999999999999998 9999
Q ss_pred EEEeCCH-hhHHHHHHcCCcEEEEcCCCCCCC-CC---CCCceeeCCccCC
Q 010820 455 LFVTDVY-QEATAAKAAGLEVVISIRPGNGPL-PE---NHGFKTINSFAEI 500 (500)
Q Consensus 455 l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~-~~---~~~~~~i~~l~el 500 (500)
+||||+. .|+.+|+++||++++|.++..... .. ..++++++++.|+
T Consensus 199 ~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 199 LMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred EEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence 9999997 899999999999999998843322 22 2348999999875
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.34 E-value=6e-12 Score=114.70 Aligned_cols=92 Identities=13% Similarity=0.095 Sum_probs=73.4
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--c-c-----------cccCCCCHHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--D-T-----------AVGNKRETPSYV 440 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d-~-----------~~~~KP~p~~~~ 440 (500)
.+++||+.++|+.++++|++++|+|++....++..++.++ +..+|...+ + . ......|+..+.
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g---~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~ 148 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLG---IDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLK 148 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcC---CchheeeeEEECCCCEEeCccCCcccCCcchHHHHHH
Confidence 3578999999999999999999999999999999999984 444433222 1 0 111234677889
Q ss_pred HHHHHcCCCCCCcEEEEeCCHhhHHHHHHc
Q 010820 441 EITNSLGVDKPSEILFVTDVYQEATAAKAA 470 (500)
Q Consensus 441 ~~l~~l~v~~p~~~l~VGDs~~Di~aA~~a 470 (500)
+.+++++++ +++++||||+.+|+.+++.+
T Consensus 149 ~~~~~~~~~-~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 149 ELLEESKIT-LKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHhCCC-HHHEEEEeCCHHHHHHHhcC
Confidence 999999997 99999999999999998753
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=99.30 E-value=4.9e-13 Score=133.00 Aligned_cols=113 Identities=11% Similarity=0.038 Sum_probs=78.7
Q ss_pred HHHHHHhCCcEEEEEcCCcHHH-HHHHHhccCccccccccccccc--c---cccCCCCHHHHHHHHHHcCCCCCCcEEEE
Q 010820 384 ALEKWHSLGTKVYIYSSGSRLA-QRLIFGNSNYGDLRKYLSGFFD--T---AVGNKRETPSYVEITNSLGVDKPSEILFV 457 (500)
Q Consensus 384 ~L~~L~~~G~~l~v~Tn~~~~~-~~~~l~~~~~~~l~~~f~~~~d--~---~~~~KP~p~~~~~~l~~l~v~~p~~~l~V 457 (500)
.+..|+.++-.++|+||.+... ....+... +...+|..+.. . ...+||+|.+|..++++++++ +++++||
T Consensus 178 a~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~---g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~-~~~~~~V 253 (311)
T PLN02645 178 ATLCIRENPGCLFIATNRDAVTHLTDAQEWA---GAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIE-KSQICMV 253 (311)
T ss_pred HHHHHhcCCCCEEEEeCCCCCCCCCCCCCcc---chHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCC-cccEEEE
Confidence 4455554333589999988643 22222333 33444544441 1 123599999999999999998 9999999
Q ss_pred eCCH-hhHHHHHHcCCcEEEEcCCCCC-CCCC-----CCCceeeCCccCC
Q 010820 458 TDVY-QEATAAKAAGLEVVISIRPGNG-PLPE-----NHGFKTINSFAEI 500 (500)
Q Consensus 458 GDs~-~Di~aA~~aG~~~i~v~~~~~~-~~~~-----~~~~~~i~~l~el 500 (500)
||+. +|+.+|+++|+++++|.++... .... ..++++++++.+|
T Consensus 254 GD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l 303 (311)
T PLN02645 254 GDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDF 303 (311)
T ss_pred cCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHH
Confidence 9997 9999999999999999887332 2211 2348999988764
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=8.2e-12 Score=123.96 Aligned_cols=102 Identities=14% Similarity=0.050 Sum_probs=89.3
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccc-cccccc--c-------ccccCCCCHHHHHHHHHH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSGFF--D-------TAVGNKRETPSYVEITNS 445 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~-~f~~~~--d-------~~~~~KP~p~~~~~~l~~ 445 (500)
.++|++.++|+.|+++|++++++||.+.......++++ ++.+ +|+... + .....||+|+++..++++
T Consensus 187 ~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l---~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~ 263 (300)
T PHA02530 187 KPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWL---RQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWE 263 (300)
T ss_pred CCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHH---HHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHH
Confidence 58999999999999999999999999999999999998 5554 565554 2 233569999999999999
Q ss_pred cCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 446 LGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 446 l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
++.++|++|+||||+.+|+++|+++|+.+++|.||
T Consensus 264 ~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g 298 (300)
T PHA02530 264 KIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPG 298 (300)
T ss_pred HhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCC
Confidence 98833899999999999999999999999999876
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.6e-12 Score=127.49 Aligned_cols=119 Identities=13% Similarity=0.153 Sum_probs=89.7
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHH-HHhccCcccccccccccc-----cccccCCCCHHHHHHHHHHcCCCC
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRL-IFGNSNYGDLRKYLSGFF-----DTAVGNKRETPSYVEITNSLGVDK 450 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~-~l~~~~~~~l~~~f~~~~-----d~~~~~KP~p~~~~~~l~~l~v~~ 450 (500)
.|+++.++|+.|+++|. ++|+||.+...... .+... ++..+|..+. +....+||+|.+|..++++++++
T Consensus 144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~---~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~- 218 (279)
T TIGR01452 144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTP---GTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSID- 218 (279)
T ss_pred CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCccc---ChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCC-
Confidence 47899999999998887 89999988654321 12222 3333433322 22345799999999999999998
Q ss_pred CCcEEEEeCCH-hhHHHHHHcCCcEEEEcCCCC-CCCCC---------CCCceeeCCccCC
Q 010820 451 PSEILFVTDVY-QEATAAKAAGLEVVISIRPGN-GPLPE---------NHGFKTINSFAEI 500 (500)
Q Consensus 451 p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~-~~~~~---------~~~~~~i~~l~el 500 (500)
|++|+||||+. .||.+|+++||++++|.+|.. .+... ..++++++++.||
T Consensus 219 ~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 219 PARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred hhhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 99999999995 999999999999999998833 22221 2359999999886
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.29 E-value=7.6e-12 Score=125.04 Aligned_cols=90 Identities=13% Similarity=0.131 Sum_probs=78.9
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhc----cCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN----SNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~----~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
+|+|+.++|+.|+++|++++|+||+.......++++ + ++.++|+.+. ...||+|+.+..+++++++. ++
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~---~~~~~f~~~~---~~~~pk~~~i~~~~~~l~i~-~~ 104 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFI---LQAEDFDARS---INWGPKSESLRKIAKKLNLG-TD 104 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCcccc---CcHHHeeEEE---EecCchHHHHHHHHHHhCCC-cC
Confidence 688999999999999999999999999999999988 5 4455554432 33699999999999999998 99
Q ss_pred cEEEEeCCHhhHHHHHHcCCc
Q 010820 453 EILFVTDVYQEATAAKAAGLE 473 (500)
Q Consensus 453 ~~l~VGDs~~Di~aA~~aG~~ 473 (500)
+++||||++.|+.++++++-.
T Consensus 105 ~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 105 SFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred cEEEECCCHHHHHHHHHHCCC
Confidence 999999999999999997764
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=8.1e-12 Score=114.50 Aligned_cols=82 Identities=12% Similarity=0.221 Sum_probs=72.1
Q ss_pred HHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHh
Q 010820 383 EALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQ 462 (500)
Q Consensus 383 ~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~ 462 (500)
..++.|+++|++++|+||.....+...++.+ ++..+|. ..+++++.+.+++++++++ |++|+||||+.+
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~l---gl~~~f~-------g~~~k~~~l~~~~~~~gl~-~~ev~~VGDs~~ 123 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTL---GITHLYQ-------GQSNKLIAFSDLLEKLAIA-PEQVAYIGDDLI 123 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHc---CCceeec-------CCCcHHHHHHHHHHHhCCC-HHHEEEECCCHH
Confidence 3778888899999999999999999999988 4444443 2477899999999999998 999999999999
Q ss_pred hHHHHHHcCCcEE
Q 010820 463 EATAAKAAGLEVV 475 (500)
Q Consensus 463 Di~aA~~aG~~~i 475 (500)
|+.+++++|+.++
T Consensus 124 D~~~a~~aG~~~~ 136 (183)
T PRK09484 124 DWPVMEKVGLSVA 136 (183)
T ss_pred HHHHHHHCCCeEe
Confidence 9999999999854
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.4e-11 Score=107.80 Aligned_cols=103 Identities=18% Similarity=0.191 Sum_probs=79.4
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCc---------------HHHHHHHHhccCccccccc-ccccc--cccccCCCCHH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGS---------------RLAQRLIFGNSNYGDLRKY-LSGFF--DTAVGNKRETP 437 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~---------------~~~~~~~l~~~~~~~l~~~-f~~~~--d~~~~~KP~p~ 437 (500)
.+.||+.++|..|++.||+++|+||-+ ...+...++..|. .+... ++... +....+||++-
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv-~id~i~~Cph~p~~~c~cRKP~~g 109 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGV-KIDGILYCPHHPEDNCDCRKPKPG 109 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCC-ccceEEECCCCCCCCCcccCCChH
Confidence 488999999999999999999999922 1223333444421 22222 11111 22466899999
Q ss_pred HHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 438 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 438 ~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
+|+.++++++++ +++.+||||+..|+++|.++|++.+.+.++
T Consensus 110 m~~~~~~~~~iD-~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~ 151 (181)
T COG0241 110 MLLSALKEYNID-LSRSYVVGDRLTDLQAAENAGIKGVLVLTG 151 (181)
T ss_pred HHHHHHHHhCCC-ccceEEecCcHHHHHHHHHCCCCceEEEcC
Confidence 999999999998 999999999999999999999999888876
|
|
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.4e-11 Score=95.53 Aligned_cols=69 Identities=26% Similarity=0.329 Sum_probs=59.9
Q ss_pred cCCCCHHHHHHHHHHcCCCCCCcEEEEeCC-HhhHHHHHHcCCcEEEEcCCCCCC-CC---CCCCceeeCCccCC
Q 010820 431 GNKRETPSYVEITNSLGVDKPSEILFVTDV-YQEATAAKAAGLEVVISIRPGNGP-LP---ENHGFKTINSFAEI 500 (500)
Q Consensus 431 ~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs-~~Di~aA~~aG~~~i~v~~~~~~~-~~---~~~~~~~i~~l~el 500 (500)
.+||+|.+|..++++++++ |++|+||||+ ..||.+|+++|+.+|+|.++.... .. ...++++++||.|+
T Consensus 2 ~gKP~p~~~~~a~~~~~~~-~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVD-PSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSG-GGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCCCcHHHHHHHHHHcCCC-HHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 3799999999999999998 9999999999 799999999999999999984433 22 23459999999874
|
... |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.2e-10 Score=108.84 Aligned_cols=101 Identities=18% Similarity=0.209 Sum_probs=83.5
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc---c---------ccccCCCCHHHHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF---D---------TAVGNKRETPSYVEI 442 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~---d---------~~~~~KP~p~~~~~~ 442 (500)
.+++||+.++++.++++|++++|+|++.....+.+.+.+|+ ...+...+ + .....+-|.....+.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~---d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~ 152 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGI---DYVVANELEIDDGKLTGRVVGPICDGEGKAKALREL 152 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCC---chheeeEEEEeCCEEeceeeeeecCcchHHHHHHHH
Confidence 57999999999999999999999999999999999999953 43333222 1 112234488899999
Q ss_pred HHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcC
Q 010820 443 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIR 479 (500)
Q Consensus 443 l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~ 479 (500)
++++|++ +++++++||+.||+..-..+|...++-..
T Consensus 153 ~~~~g~~-~~~~~a~gDs~nDlpml~~ag~~ia~n~~ 188 (212)
T COG0560 153 AAELGIP-LEETVAYGDSANDLPMLEAAGLPIAVNPK 188 (212)
T ss_pred HHHcCCC-HHHeEEEcCchhhHHHHHhCCCCeEeCcC
Confidence 9999998 99999999999999999999998776544
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.1e-11 Score=104.96 Aligned_cols=91 Identities=18% Similarity=0.166 Sum_probs=75.6
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCC-cHHHHHHHHhccC----cccccccccccccccccCCCCHHHHHHHHHHcC--C
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSG-SRLAQRLIFGNSN----YGDLRKYLSGFFDTAVGNKRETPSYVEITNSLG--V 448 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~-~~~~~~~~l~~~~----~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~--v 448 (500)
+++||+.++|+.|+++|++++|+||+ ....+...++.++ +..+.++|+.++. ...+|+|++|..++++++ +
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~--~~~~pkp~~~~~a~~~lg~~~ 106 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTI--GYWLPKSPRLVEIALKLNGVL 106 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhh--cCCCcHHHHHHHHHHHhcCCC
Confidence 48999999999999999999999999 8888888888873 0014555655442 224799999999999999 9
Q ss_pred CCCCcEEEEeCCHhhHHHHHH
Q 010820 449 DKPSEILFVTDVYQEATAAKA 469 (500)
Q Consensus 449 ~~p~~~l~VGDs~~Di~aA~~ 469 (500)
. |++|+||||+..|++..++
T Consensus 107 ~-p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 107 K-PKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred C-cceEEEECCCHhHHHHHHh
Confidence 8 9999999999999887664
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=99.22 E-value=5.4e-12 Score=122.04 Aligned_cols=120 Identities=14% Similarity=0.129 Sum_probs=93.1
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc---c--ccccCCCCHHHHHHHHHHcCCCCC
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF---D--TAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~---d--~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
.|+++.++++.|++.+.+++|+||.+.......+... ++..+|+.+. + ....+||+|++|+.++++++++ |
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~---g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~-~ 196 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLAL---DVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCE-P 196 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCC---CchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCC-h
Confidence 4678899999999989999999998887766555555 4444454333 1 1223699999999999999998 9
Q ss_pred CcEEEEeCCH-hhHHHHHHcCCcEEEEcCCC-CCCC--C-CCCCceeeCCccCC
Q 010820 452 SEILFVTDVY-QEATAAKAAGLEVVISIRPG-NGPL--P-ENHGFKTINSFAEI 500 (500)
Q Consensus 452 ~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~-~~~~--~-~~~~~~~i~~l~el 500 (500)
++|+||||+. +|+.+|+++|+.+++|.++. .... . ...++++++++.||
T Consensus 197 ~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el 250 (257)
T TIGR01458 197 EEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHA 250 (257)
T ss_pred hhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHH
Confidence 9999999996 99999999999999998873 2221 1 22348999998764
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.5e-11 Score=107.28 Aligned_cols=92 Identities=20% Similarity=0.177 Sum_probs=79.3
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccc-ccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY-LSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~-f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
..++||+.++|+.|+ ++++++|+||+....+..+++++ ++..+ |+.++ +.....||+ |.+++++++.+ |
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l---~~~~~~f~~i~~~~d~~~~KP~---~~k~l~~l~~~-p 115 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLL---DPKKYFGYRRLFRDECVFVKGK---YVKDLSLLGRD-L 115 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHh---CcCCCEeeeEEECccccccCCe---EeecHHHcCCC-h
Confidence 568999999999998 57999999999999999999998 45443 56655 345556776 99999999998 9
Q ss_pred CcEEEEeCCHhhHHHHHHcCCcE
Q 010820 452 SEILFVTDVYQEATAAKAAGLEV 474 (500)
Q Consensus 452 ~~~l~VGDs~~Di~aA~~aG~~~ 474 (500)
++|+||||++.|+++|.++|+..
T Consensus 116 ~~~i~i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 116 SNVIIIDDSPDSWPFHPENLIPI 138 (148)
T ss_pred hcEEEEECCHHHhhcCccCEEEe
Confidence 99999999999999999998865
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.14 E-value=3.5e-11 Score=115.10 Aligned_cols=120 Identities=23% Similarity=0.262 Sum_probs=77.7
Q ss_pred CCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCCcEE
Q 010820 378 FDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSEIL 455 (500)
Q Consensus 378 ~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~~~l 455 (500)
|....+++..+++ | ...|+||.+......---..+-+-+...+...- +....+||++.+|+.++++++.+ +++++
T Consensus 135 ~e~l~~a~~~i~~-g-~~fI~tNpD~~~p~~~g~~pgaGai~~~~~~~tg~~~~~~GKP~~~i~~~al~~~~~~-~~~~~ 211 (269)
T COG0647 135 YEKLAEALLAIAA-G-APFIATNPDLTVPTERGLRPGAGAIAALLEQATGREPTVIGKPSPAIYEAALEKLGLD-RSEVL 211 (269)
T ss_pred HHHHHHHHHHHHc-C-CcEEEeCCCccccCCCCCccCcHHHHHHHHHhhCCcccccCCCCHHHHHHHHHHhCCC-cccEE
Confidence 3445666666654 4 688899976533211100000000000010000 11245799999999999999998 99999
Q ss_pred EEeCCH-hhHHHHHHcCCcEEEEcCCCC-CCCCC---CCCceeeCCccCC
Q 010820 456 FVTDVY-QEATAAKAAGLEVVISIRPGN-GPLPE---NHGFKTINSFAEI 500 (500)
Q Consensus 456 ~VGDs~-~Di~aA~~aG~~~i~v~~~~~-~~~~~---~~~~~~i~~l~el 500 (500)
||||+. +||.+|+++||.+++|..|-. ..... ..++++++++.++
T Consensus 212 mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~ 261 (269)
T COG0647 212 MVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAEL 261 (269)
T ss_pred EEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHH
Confidence 999998 999999999999999999833 22222 2348888887663
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.4e-10 Score=121.29 Aligned_cols=90 Identities=20% Similarity=0.326 Sum_probs=72.8
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcH------------HHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHH
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSR------------LAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEI 442 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~------------~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~ 442 (500)
++||+.+.|+.|++.|++++|+||... ..+..+++.+++ . |+.++ +....+||+|.++..+
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgi---p--fdviia~~~~~~RKP~pGm~~~a 272 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGV---P--FQVFIAIGAGFYRKPLTGMWDHL 272 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCC---c--eEEEEeCCCCCCCCCCHHHHHHH
Confidence 789999999999999999999999766 346777888843 2 44444 3345679999999999
Q ss_pred HHHcC----CCCCCcEEEEeCCHhhHHHHHHcCC
Q 010820 443 TNSLG----VDKPSEILFVTDVYQEATAAKAAGL 472 (500)
Q Consensus 443 l~~l~----v~~p~~~l~VGDs~~Di~aA~~aG~ 472 (500)
+++++ ++ +++++||||+..|+++++++|-
T Consensus 273 ~~~~~~~~~Id-~~~S~~VGDaagr~~~g~~ag~ 305 (526)
T TIGR01663 273 KEEANDGTEIQ-EDDCFFVGDAAGRPANGKAAGK 305 (526)
T ss_pred HHhcCcccCCC-HHHeEEeCCcccchHHHHhcCC
Confidence 99995 77 9999999999988777666554
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=99.10 E-value=4.9e-10 Score=99.94 Aligned_cols=103 Identities=20% Similarity=0.273 Sum_probs=72.2
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEc-CCcHHHHHHHHhccCcc-------cccccccccccccccCCCCHHHHHHHHHH
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYS-SGSRLAQRLIFGNSNYG-------DLRKYLSGFFDTAVGNKRETPSYVEITNS 445 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~T-n~~~~~~~~~l~~~~~~-------~l~~~f~~~~d~~~~~KP~p~~~~~~l~~ 445 (500)
...+||++.++|+.|+++|++++++| +...+.++.+|+.+++. .+.++|+. ..+..-.+...|..+.++
T Consensus 43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~---~eI~~gsK~~Hf~~i~~~ 119 (169)
T PF12689_consen 43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDY---LEIYPGSKTTHFRRIHRK 119 (169)
T ss_dssp EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECE---EEESSS-HHHHHHHHHHH
T ss_pred EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcch---hheecCchHHHHHHHHHh
Confidence 45799999999999999999999999 56688999999999543 00033332 123334788899999999
Q ss_pred cCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 446 LGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 446 l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
.|++ .++++|++|..++++...+.|+.++++.+|
T Consensus 120 tgI~-y~eMlFFDDe~~N~~~v~~lGV~~v~v~~G 153 (169)
T PF12689_consen 120 TGIP-YEEMLFFDDESRNIEVVSKLGVTCVLVPDG 153 (169)
T ss_dssp H----GGGEEEEES-HHHHHHHHTTT-EEEE-SSS
T ss_pred cCCC-hhHEEEecCchhcceeeEecCcEEEEeCCC
Confidence 9998 999999999999999999999999999875
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.4e-09 Score=102.23 Aligned_cols=100 Identities=11% Similarity=0.045 Sum_probs=67.6
Q ss_pred cccCCCHHHHH-HHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccccccccccc----ccCCC--CHHHHHHHHHHcC
Q 010820 375 GEVFDDVPEAL-EKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTA----VGNKR--ETPSYVEITNSLG 447 (500)
Q Consensus 375 ~~~~pgv~~~L-~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~----~~~KP--~p~~~~~~l~~l~ 447 (500)
..++||+.++| +.|+++|++++|+||+....+..+++.+++......+..-++.. ..+.+ ...=..++.+.++
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~~ 173 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLIASQMQRRYGGWVLTLRCLGHEKVAQLERKIG 173 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceEEEEEEEEEccEECCccCCChHHHHHHHHHhC
Confidence 46799999999 67888999999999999999999998885311122222221111 11111 1122233444456
Q ss_pred CCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 010820 448 VDKPSEILFVTDVYQEATAAKAAGLEVV 475 (500)
Q Consensus 448 v~~p~~~l~VGDs~~Di~aA~~aG~~~i 475 (500)
.+ ...+.+-|||.+|+.....+|-..+
T Consensus 174 ~~-~~~~~aY~Ds~~D~pmL~~a~~~~~ 200 (211)
T PRK11590 174 TP-LRLYSGYSDSKQDNPLLYFCQHRWR 200 (211)
T ss_pred CC-cceEEEecCCcccHHHHHhCCCCEE
Confidence 55 7788899999999999998887654
|
|
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=7.9e-10 Score=100.24 Aligned_cols=104 Identities=15% Similarity=0.210 Sum_probs=80.5
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHH---------------HHHHHhccCcc-cccccc---cccccc------cc
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLA---------------QRLIFGNSNYG-DLRKYL---SGFFDT------AV 430 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~---------------~~~~l~~~~~~-~l~~~f---~~~~d~------~~ 430 (500)
.+.|+...++.+|++.|++++|+|=+++.. +...+++.+-. .+...+ -.+++. .+
T Consensus 75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~g 154 (219)
T PTZ00445 75 SVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLG 154 (219)
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhc
Confidence 366778899999999999999999887744 66667655311 111111 111222 35
Q ss_pred cCCCCHHH--H--HHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 431 GNKRETPS--Y--VEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 431 ~~KP~p~~--~--~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
..||+|.+ | +++++++|++ |++|+||+|+..++++|++.|++++.+..+
T Consensus 155 l~KPdp~iK~yHle~ll~~~gl~-peE~LFIDD~~~NVeaA~~lGi~ai~f~~~ 207 (219)
T PTZ00445 155 LDAPMPLDKSYHLKQVCSDFNVN-PDEILFIDDDMNNCKNALKEGYIALHVTGN 207 (219)
T ss_pred ccCCCccchHHHHHHHHHHcCCC-HHHeEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence 57999999 9 9999999998 999999999999999999999999999753
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.5e-10 Score=109.59 Aligned_cols=97 Identities=12% Similarity=0.122 Sum_probs=78.2
Q ss_pred CCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccccccc--c--cccccCCCCHHHHHHHHHHcCCCCCCc
Q 010820 378 FDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGF--F--DTAVGNKRETPSYVEITNSLGVDKPSE 453 (500)
Q Consensus 378 ~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~--~--d~~~~~KP~p~~~~~~l~~l~v~~p~~ 453 (500)
|+++.++|+.|+++|.++ |+||.+.......+...+ ...+|..+ . +....+||+|.+|+.++++++..++++
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~---~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~ 215 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYG---AGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNR 215 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEec---ccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCccc
Confidence 689999999998899987 889998887766666663 33333322 1 234468999999999999999753679
Q ss_pred EEEEeCC-HhhHHHHHHcCCcEEEEc
Q 010820 454 ILFVTDV-YQEATAAKAAGLEVVISI 478 (500)
Q Consensus 454 ~l~VGDs-~~Di~aA~~aG~~~i~v~ 478 (500)
|+||||+ .+|+.+|+++|+.+++|.
T Consensus 216 ~~~vGD~~~~Di~~a~~~G~~~i~v~ 241 (242)
T TIGR01459 216 MLMVGDSFYTDILGANRLGIDTALVL 241 (242)
T ss_pred EEEECCCcHHHHHHHHHCCCeEEEEe
Confidence 9999999 599999999999999985
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.99 E-value=6.7e-10 Score=98.02 Aligned_cols=119 Identities=16% Similarity=0.143 Sum_probs=79.0
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccc---cc---c-ccccc---cc---cccCCCCHHHHH
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDL---RK---Y-LSGFF---DT---AVGNKRETPSYV 440 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l---~~---~-f~~~~---d~---~~~~KP~p~~~~ 440 (500)
+.++.||+++++..|+++|.+++++|++.+..+..+-..+|+.-- .+ + .++-| +. ...+--+++.+.
T Consensus 86 k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~ 165 (227)
T KOG1615|consen 86 KPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIA 165 (227)
T ss_pred CCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHH
Confidence 457899999999999999999999999999999999988865320 00 0 11222 11 111223777888
Q ss_pred HHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCC--CceeeCCcc
Q 010820 441 EITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENH--GFKTINSFA 498 (500)
Q Consensus 441 ~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~--~~~~i~~l~ 498 (500)
.+.+ ++. .+.++||||..+|+++..- |. .|+..+++....... ..+.+++|.
T Consensus 166 ~lrk--~~~-~~~~~mvGDGatDlea~~p-a~--afi~~~g~~~r~~vk~nak~~~~~f~ 219 (227)
T KOG1615|consen 166 LLRK--NYN-YKTIVMVGDGATDLEAMPP-AD--AFIGFGGNVIREGVKANAKWYVTDFY 219 (227)
T ss_pred HHHh--CCC-hheeEEecCCccccccCCc-hh--hhhccCCceEcHhhHhccHHHHHHHH
Confidence 8877 554 6699999999999988766 33 333334443332222 255555543
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.98 E-value=6.5e-09 Score=108.51 Aligned_cols=95 Identities=13% Similarity=0.176 Sum_probs=75.0
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
.+++||+.++|++++++|++++++||+.+...+.+++++ ++ |+.++ +.....||++.. ..+.+.++ .+
T Consensus 71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~l---Gl---Fd~Vigsd~~~~~kg~~K~-~~l~~~l~---~~ 140 (479)
T PRK08238 71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHL---GL---FDGVFASDGTTNLKGAAKA-AALVEAFG---ER 140 (479)
T ss_pred CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc---CC---CCEEEeCCCccccCCchHH-HHHHHHhC---cc
Confidence 357799999999999999999999999999999999888 33 55555 333445665543 23445555 35
Q ss_pred cEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 453 EILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 453 ~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
+++|+||+.+|+.+++.+| ..+.|+.+
T Consensus 141 ~~~yvGDS~~Dlp~~~~A~-~av~Vn~~ 167 (479)
T PRK08238 141 GFDYAGNSAADLPVWAAAR-RAIVVGAS 167 (479)
T ss_pred CeeEecCCHHHHHHHHhCC-CeEEECCC
Confidence 7999999999999999999 77788765
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.6e-08 Score=97.20 Aligned_cols=93 Identities=15% Similarity=0.181 Sum_probs=76.5
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccccccc------c--cccccCCCCH---------
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGF------F--DTAVGNKRET--------- 436 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~------~--d~~~~~KP~p--------- 436 (500)
...+.||+.++|+.|+++|++++|+|++....++.+++.++ +...+..+ | +....++|.|
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lg---l~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~ 195 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAG---VYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNH 195 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcC---CCCcCceEEeeeEEECCCCeEeCCCCCcccccccHH
Confidence 46799999999999999999999999999999999999984 43333333 3 2344457777
Q ss_pred HHHHHHHHHcC--CCCCCcEEEEeCCHhhHHHHHHc
Q 010820 437 PSYVEITNSLG--VDKPSEILFVTDVYQEATAAKAA 470 (500)
Q Consensus 437 ~~~~~~l~~l~--v~~p~~~l~VGDs~~Di~aA~~a 470 (500)
.+++...+.++ .. +++|++|||+.+|+.+|.-.
T Consensus 196 ~v~~~~~~~~~~~~~-~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 196 DVALRNTEYFNQLKD-RSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred HHHHHHHHHhCccCC-cceEEEECcChhhhhHhcCC
Confidence 78888999998 66 99999999999999997655
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=98.91 E-value=3.1e-09 Score=94.72 Aligned_cols=93 Identities=18% Similarity=0.189 Sum_probs=65.9
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCc--------------HHHHHHHHhccCcccccccccccc--cccccCCCCHHHHH
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGS--------------RLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYV 440 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~--------------~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~ 440 (500)
+.|++.+.|++|.+.||.++|+||-. ...+..+++.+++ . +..++ .....+||.+-|++
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~i---p--~~~~~a~~~d~~RKP~~GM~~ 104 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGI---P--IQVYAAPHKDPCRKPNPGMWE 104 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS------EEEEECGCSSTTSTTSSHHHH
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCC---c--eEEEecCCCCCCCCCchhHHH
Confidence 44689999999999999999999942 1334455555532 2 11122 22367899999999
Q ss_pred HHHHHcCC----CCCCcEEEEeCC-----------HhhHHHHHHcCCcEE
Q 010820 441 EITNSLGV----DKPSEILFVTDV-----------YQEATAAKAAGLEVV 475 (500)
Q Consensus 441 ~~l~~l~v----~~p~~~l~VGDs-----------~~Di~aA~~aG~~~i 475 (500)
.++++++. + .++++||||. ..|..-|.+.|+++.
T Consensus 105 ~~~~~~~~~~~id-~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 105 FALKDYNDGVEID-LANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY 153 (159)
T ss_dssp HHCCCTSTT--S--CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred HHHHhcccccccc-ccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence 99999975 6 8999999996 589999999999864
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.6e-08 Score=95.06 Aligned_cols=103 Identities=17% Similarity=0.143 Sum_probs=79.3
Q ss_pred ccccCCCHHHHHHHH--HhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc------cccc------------cCC
Q 010820 374 EGEVFDDVPEALEKW--HSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF------DTAV------------GNK 433 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L--~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~------d~~~------------~~K 433 (500)
..++.||+.++++.+ ++.|+.+.|+|+++..+++.+|++. ++...|+.++ +..+ ..-
T Consensus 69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~---gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C 145 (234)
T PF06888_consen 69 SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHH---GLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLC 145 (234)
T ss_pred cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhC---CCccccceEEeCCceecCCceEEEeCccCCCCCcC
Confidence 567899999999999 4579999999999999999999999 5666666655 1100 011
Q ss_pred C----CHHHHHHHHHHc---CCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 434 R----ETPSYVEITNSL---GVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 434 P----~p~~~~~~l~~l---~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
| |..++.+.++.. |+. .++++||||+.+|+-++.+.+-.-+.+.|-
T Consensus 146 ~~NmCK~~il~~~~~~~~~~g~~-~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~ 198 (234)
T PF06888_consen 146 PPNMCKGKILERLLQEQAQRGVP-YDRVIYIGDGRNDFCPALRLRPRDVVFPRK 198 (234)
T ss_pred CCccchHHHHHHHHHHHhhcCCC-cceEEEECCCCCCcCcccccCCCCEEecCC
Confidence 2 566777777663 665 789999999999999999987766555553
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.2e-08 Score=98.20 Aligned_cols=103 Identities=17% Similarity=0.103 Sum_probs=83.0
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCc-----ccccccccccccccccCCC---------------
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNY-----GDLRKYLSGFFDTAVGNKR--------------- 434 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~-----~~l~~~f~~~~d~~~~~KP--------------- 434 (500)
....||+.++|++|+++|++++|+||+....+...++.+.. .++.++|+.++. ...||
T Consensus 183 v~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt--~a~KP~FF~~~~pf~~v~~~ 260 (343)
T TIGR02244 183 VLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIV--DARKPGFFTEGRPFRQVDVE 260 (343)
T ss_pred hccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEe--CCCCCcccCCCCceEEEeCC
Confidence 46799999999999999999999999999999999998621 246777776551 12333
Q ss_pred ------CH------------HHHHHHHHHcCCCCCCcEEEEeCCH-hhHHHHH-HcCCcEEEEcCC
Q 010820 435 ------ET------------PSYVEITNSLGVDKPSEILFVTDVY-QEATAAK-AAGLEVVISIRP 480 (500)
Q Consensus 435 ------~p------------~~~~~~l~~l~v~~p~~~l~VGDs~-~Di~aA~-~aG~~~i~v~~~ 480 (500)
.. -......+.++++ +++++||||+. .||.+++ .+||.+++|.+.
T Consensus 261 ~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~-~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~pE 325 (343)
T TIGR02244 261 TGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWR-GKEVLYFGDHIYGDLLRSKKKRGWRTAAIIPE 325 (343)
T ss_pred CCcccCCccccccCCCeEeCCCHHHHHHHHCCC-CCcEEEECCcchHHHHhhHHhcCcEEEEEchh
Confidence 11 1345677888998 99999999998 8999998 899999999864
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.9e-08 Score=88.26 Aligned_cols=93 Identities=16% Similarity=0.141 Sum_probs=66.5
Q ss_pred cCCCHHHHHHHHHhCCc--EEEEEcCCc-------HHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcC
Q 010820 377 VFDDVPEALEKWHSLGT--KVYIYSSGS-------RLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLG 447 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~--~l~v~Tn~~-------~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~ 447 (500)
+.|.+.+.+++|++.+. .+.|+||+. ...++.+-+.+++ .+|. ....|| ..+..+++.++
T Consensus 60 i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgI----pvl~-----h~~kKP--~~~~~i~~~~~ 128 (168)
T PF09419_consen 60 IPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGI----PVLR-----HRAKKP--GCFREILKYFK 128 (168)
T ss_pred CCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCC----cEEE-----eCCCCC--ccHHHHHHHHh
Confidence 44556678888888866 499999984 5556666555531 1111 113566 56666776664
Q ss_pred C----CCCCcEEEEeCCH-hhHHHHHHcCCcEEEEcCC
Q 010820 448 V----DKPSEILFVTDVY-QEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 448 v----~~p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~ 480 (500)
. ..|++++||||.. .||.+|.++|+.+||+..|
T Consensus 129 ~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~g 166 (168)
T PF09419_consen 129 CQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDG 166 (168)
T ss_pred hccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecC
Confidence 2 1399999999998 9999999999999999875
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=98.77 E-value=7.8e-08 Score=90.04 Aligned_cols=101 Identities=12% Similarity=0.116 Sum_probs=67.9
Q ss_pred cccCCCHHHHHH-HHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccC----CC--CHHHHHHHHHHcC
Q 010820 375 GEVFDDVPEALE-KWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGN----KR--ETPSYVEITNSLG 447 (500)
Q Consensus 375 ~~~~pgv~~~L~-~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~----KP--~p~~~~~~l~~l~ 447 (500)
..++||+.++|+ .++++|++++|+||+....++.+.+..++.+..+.+..-++....+ .+ ..+=..++.+.++
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~~ 172 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLNLIASQIERGNGGWVLPLRCLGHEKVAQLEQKIG 172 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCcEEEEEeEEeCCceEcCccCCChHHHHHHHHHhC
Confidence 358999999995 8888999999999999999999987764423233332222110001 11 1122223434445
Q ss_pred CCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 010820 448 VDKPSEILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 448 v~~p~~~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
.+ .+.+.+-|||.+|+.....+|-..+.
T Consensus 173 ~~-~~~~~aYsDS~~D~pmL~~a~~~~~V 200 (210)
T TIGR01545 173 SP-LKLYSGYSDSKQDNPLLAFCEHRWRV 200 (210)
T ss_pred CC-hhheEEecCCcccHHHHHhCCCcEEE
Confidence 44 67888999999999999998876543
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.5e-08 Score=97.20 Aligned_cols=89 Identities=10% Similarity=0.090 Sum_probs=69.0
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHH--HHHhccCcccccc-cccccccccccCCCCHHHHHHHHHHcCCCCCCc
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQR--LIFGNSNYGDLRK-YLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 453 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~--~~l~~~~~~~l~~-~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~ 453 (500)
++||+.++|++|+++|++++++||+++.... ..++++ ++.. +|+.++..... ....+.++++++++. |++
T Consensus 25 ~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~---gl~~~~~~~Ii~s~~~---~~~~l~~~~~~~~~~-~~~ 97 (242)
T TIGR01459 25 TYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSL---GINADLPEMIISSGEI---AVQMILESKKRFDIR-NGI 97 (242)
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHC---CCCccccceEEccHHH---HHHHHHhhhhhccCC-Cce
Confidence 7999999999999999999999999887665 678888 5555 66665522111 125777778888987 999
Q ss_pred EEEEeCCHhhHHHHHHcCC
Q 010820 454 ILFVTDVYQEATAAKAAGL 472 (500)
Q Consensus 454 ~l~VGDs~~Di~aA~~aG~ 472 (500)
|++|||+..|++.....|.
T Consensus 98 ~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 98 IYLLGHLENDIINLMQCYT 116 (242)
T ss_pred EEEeCCcccchhhhcCCCc
Confidence 9999999988887755544
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=5.3e-08 Score=95.12 Aligned_cols=113 Identities=12% Similarity=0.070 Sum_probs=72.0
Q ss_pred CCCHHHHHHHHHhCCcEEEEEcCCc-----HHHHHHHHhccCccccccc--ccccccccccCCCCHHHHHHHHHHcCCCC
Q 010820 378 FDDVPEALEKWHSLGTKVYIYSSGS-----RLAQRLIFGNSNYGDLRKY--LSGFFDTAVGNKRETPSYVEITNSLGVDK 450 (500)
Q Consensus 378 ~pgv~~~L~~L~~~G~~l~v~Tn~~-----~~~~~~~l~~~~~~~l~~~--f~~~~d~~~~~KP~p~~~~~~l~~l~v~~ 450 (500)
++++.++++.++..+..+.++++.. ......+.+.++ +.-. ...+++.....-.++..++.++++++++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~- 214 (272)
T PRK10530 139 FTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHELG---LECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWS- 214 (272)
T ss_pred eEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhcC---ceEEEecCceEEEecCCCChHHHHHHHHHHcCCC-
Confidence 4667777777777676677777644 223334444442 2211 1123344333445788999999999998
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCc
Q 010820 451 PSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSF 497 (500)
Q Consensus 451 p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l 497 (500)
++++++|||+.||+++++.+|+..+. +...+.....+++++++-
T Consensus 215 ~~e~i~~GD~~NDi~m~~~ag~~vam---gna~~~lk~~Ad~v~~~n 258 (272)
T PRK10530 215 MKNVVAFGDNFNDISMLEAAGLGVAM---GNADDAVKARADLVIGDN 258 (272)
T ss_pred HHHeEEeCCChhhHHHHHhcCceEEe---cCchHHHHHhCCEEEecC
Confidence 99999999999999999999974433 322223333347776553
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=98.73 E-value=1e-07 Score=91.70 Aligned_cols=85 Identities=11% Similarity=0.098 Sum_probs=61.9
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcH---HHHHHHHhccCccccccc-ccccccccccCCCCHHHHHHHHHHcCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSR---LAQRLIFGNSNYGDLRKY-LSGFFDTAVGNKRETPSYVEITNSLGVD 449 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~---~~~~~~l~~~~~~~l~~~-f~~~~d~~~~~KP~p~~~~~~l~~l~v~ 449 (500)
...++||+.++|+.|+++|++++++||+.. ......++.+| +... ++.++ .....++++..+..+.+.+++
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~G---i~~~~~d~ll-lr~~~~~K~~rr~~I~~~y~I- 190 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFG---FPQADEEHLL-LKKDKSSKESRRQKVQKDYEI- 190 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcC---cCCCCcceEE-eCCCCCCcHHHHHHHHhcCCE-
Confidence 456999999999999999999999999874 44456677774 4333 23333 111236778888888776655
Q ss_pred CCCcEEEEeCCHhhHHHH
Q 010820 450 KPSEILFVTDVYQEATAA 467 (500)
Q Consensus 450 ~p~~~l~VGDs~~Di~aA 467 (500)
++||||+..|+...
T Consensus 191 ----vl~vGD~~~Df~~~ 204 (266)
T TIGR01533 191 ----VLLFGDNLLDFDDF 204 (266)
T ss_pred ----EEEECCCHHHhhhh
Confidence 69999999999653
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.73 E-value=8.1e-08 Score=88.49 Aligned_cols=88 Identities=17% Similarity=0.231 Sum_probs=60.8
Q ss_pred CCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccc-------cccCC---CCHHHHHHH---HHH
Q 010820 379 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT-------AVGNK---RETPSYVEI---TNS 445 (500)
Q Consensus 379 pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~-------~~~~K---P~p~~~~~~---l~~ 445 (500)
|++.++|+.++++|++++|+|++....++.+++.+++....-+-...++. ....+ -|...+..+ ...
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~ 171 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIRDEE 171 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHHhhc
Confidence 44449999999999999999999999999999988543311111111110 00111 155566666 444
Q ss_pred cCCCCCCcEEEEeCCHhhHHHHH
Q 010820 446 LGVDKPSEILFVTDVYQEATAAK 468 (500)
Q Consensus 446 l~v~~p~~~l~VGDs~~Di~aA~ 468 (500)
+.. +..+++|||+.+|+.+++
T Consensus 172 -~~~-~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 172 -DID-PDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp -THT-CCEEEEEESSGGGHHHHH
T ss_pred -CCC-CCeEEEEECCHHHHHHhC
Confidence 776 889999999999998875
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.67 E-value=2.3e-08 Score=85.59 Aligned_cols=84 Identities=18% Similarity=0.279 Sum_probs=72.1
Q ss_pred HHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhh
Q 010820 384 ALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQE 463 (500)
Q Consensus 384 ~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~D 463 (500)
.|+.|.+.|++++|+|+......+...+.+| +..++.+ .+.+...|..+++++++. +++|.||||..+|
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LG---I~~~~qG-------~~dK~~a~~~L~~~~~l~-~e~~ayiGDD~~D 111 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLG---IKHLYQG-------ISDKLAAFEELLKKLNLD-PEEVAYVGDDLVD 111 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcC---Cceeeec-------hHhHHHHHHHHHHHhCCC-HHHhhhhcCcccc
Confidence 5777888999999999999999999998884 4444433 455888999999999999 9999999999999
Q ss_pred HHHHHHcCCcEEEEc
Q 010820 464 ATAAKAAGLEVVISI 478 (500)
Q Consensus 464 i~aA~~aG~~~i~v~ 478 (500)
+....+.|+.++..+
T Consensus 112 lpvm~~vGls~a~~d 126 (170)
T COG1778 112 LPVMEKVGLSVAVAD 126 (170)
T ss_pred HHHHHHcCCcccccc
Confidence 999999999887554
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.67 E-value=6.2e-09 Score=92.87 Aligned_cols=69 Identities=25% Similarity=0.306 Sum_probs=55.9
Q ss_pred cccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCH-hhHHHHHHcCCcEEEEcCCCCCCCCCC----CCceeeCCcc
Q 010820 429 AVGNKRETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAAGLEVVISIRPGNGPLPEN----HGFKTINSFA 498 (500)
Q Consensus 429 ~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~~~----~~~~~i~~l~ 498 (500)
...+||+|.+|+.+++.+|++ |++++||||.. .|+-+|++.||+.|+|..+.-++..+. .++.+.++|.
T Consensus 177 ~vvGKP~~~fFe~al~~~gv~-p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~ 250 (262)
T KOG3040|consen 177 TVVGKPSPFFFESALQALGVD-PEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFA 250 (262)
T ss_pred EEecCCCHHHHHHHHHhcCCC-hHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHH
Confidence 456799999999999999998 99999999887 799999999999999998844332222 2366666654
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=3.4e-07 Score=87.06 Aligned_cols=82 Identities=17% Similarity=0.220 Sum_probs=56.3
Q ss_pred EEEEcCCcHHHHHHHHhccCcccccccccc-cccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCc
Q 010820 395 VYIYSSGSRLAQRLIFGNSNYGDLRKYLSG-FFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLE 473 (500)
Q Consensus 395 l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~-~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~ 473 (500)
+.+.++.........+++++. .+.-.... .++.......|+..+..++++++++ ++++++|||+.||+.+++.+|+.
T Consensus 118 ~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~-~~~~i~~GD~~NDi~m~~~ag~~ 195 (230)
T PRK01158 118 VALRRTVPVEEVRELLEELGL-DLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGID-PEEVAAIGDSENDLEMFEVAGFG 195 (230)
T ss_pred eeecccccHHHHHHHHHHcCC-cEEEEecceEEEEeeCCCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHHhcCce
Confidence 445555555566666665521 11111111 1233444566899999999999998 99999999999999999999997
Q ss_pred EEEEc
Q 010820 474 VVISI 478 (500)
Q Consensus 474 ~i~v~ 478 (500)
++.-+
T Consensus 196 vam~N 200 (230)
T PRK01158 196 VAVAN 200 (230)
T ss_pred EEecC
Confidence 65544
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.49 E-value=2.3e-07 Score=99.32 Aligned_cols=109 Identities=17% Similarity=0.195 Sum_probs=81.2
Q ss_pred cccCCCHHHHHHHHHhCCc-EEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCc
Q 010820 375 GEVFDDVPEALEKWHSLGT-KVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 453 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~-~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~ 453 (500)
.+++||+.++|++|+++|+ +++++||.+.......++++ ++.++|.... .+++ ..++++++.+ +++
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~l---gi~~~f~~~~-----p~~K----~~~i~~l~~~-~~~ 427 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVAREL---GIDEVHAELL-----PEDK----LEIVKELREK-YGP 427 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHc---CChhhhhccC-----cHHH----HHHHHHHHhc-CCE
Confidence 4789999999999999999 99999999999999999999 4555543221 1223 3466666666 789
Q ss_pred EEEEeCCHhhHHHHHHcCCcEEEEcCCCC-CCCCCCCCceee--CCccC
Q 010820 454 ILFVTDVYQEATAAKAAGLEVVISIRPGN-GPLPENHGFKTI--NSFAE 499 (500)
Q Consensus 454 ~l~VGDs~~Di~aA~~aG~~~i~v~~~~~-~~~~~~~~~~~i--~~l~e 499 (500)
++||||+.+|+.+++++|+ .+.++.. .+.....+|+++ +++.+
T Consensus 428 v~~vGDg~nD~~al~~A~v---gia~g~~~~~~~~~~ad~vl~~~~l~~ 473 (536)
T TIGR01512 428 VAMVGDGINDAPALAAADV---GIAMGASGSDVAIETADVVLLNDDLSR 473 (536)
T ss_pred EEEEeCCHHHHHHHHhCCE---EEEeCCCccHHHHHhCCEEEECCCHHH
Confidence 9999999999999999995 5555522 222233347777 66654
|
. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.46 E-value=3.6e-07 Score=98.37 Aligned_cols=105 Identities=14% Similarity=0.142 Sum_probs=77.8
Q ss_pred cccCCCHHHHHHHHHhCC-cEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCc
Q 010820 375 GEVFDDVPEALEKWHSLG-TKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 453 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G-~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~ 453 (500)
..++||+.++|++|+++| ++++|+||........+++++ ++.++|.... .+++++ ++++++.. +++
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~l---gi~~~f~~~~-----p~~K~~----~v~~l~~~-~~~ 449 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAEL---GIDEVHAELL-----PEDKLA----IVKELQEE-GGV 449 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHh---CCCeeeccCC-----HHHHHH----HHHHHHHc-CCE
Confidence 479999999999999999 999999999999999999999 5555554321 223344 44455445 789
Q ss_pred EEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeC
Q 010820 454 ILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTIN 495 (500)
Q Consensus 454 ~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~ 495 (500)
|+||||+.+|+.+++++| +.+.++...+.....+|+++.
T Consensus 450 v~~vGDg~nD~~al~~A~---vgia~g~~~~~~~~~Ad~vi~ 488 (556)
T TIGR01525 450 VAMVGDGINDAPALAAAD---VGIAMGAGSDVAIEAADIVLL 488 (556)
T ss_pred EEEEECChhHHHHHhhCC---EeEEeCCCCHHHHHhCCEEEe
Confidence 999999999999999999 455555222222223477776
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=98.45 E-value=4.5e-07 Score=87.00 Aligned_cols=56 Identities=13% Similarity=0.172 Sum_probs=46.9
Q ss_pred CCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHH
Q 010820 379 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETP 437 (500)
Q Consensus 379 pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~ 437 (500)
||+.++|++|+++|++++|+||+.+..+...++.+ ++..+|+.++ +.....||+|+
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~l---GLd~YFdvIIs~Gdv~~~kp~~e 206 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKV---KLDRYFDIIISGGHKAEEYSTMS 206 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHc---CCCcccCEEEECCccccCCCCcc
Confidence 88999999999999999999999999999999999 6777887666 33455566554
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.40 E-value=4.3e-06 Score=75.81 Aligned_cols=102 Identities=15% Similarity=0.114 Sum_probs=74.7
Q ss_pred ccccCCCHHHHHHHHHhCCc-EEEEEcCCcHHHHHHHHhccCccccccccccccc------ccc-----cC--------C
Q 010820 374 EGEVFDDVPEALEKWHSLGT-KVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFD------TAV-----GN--------K 433 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~-~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d------~~~-----~~--------K 433 (500)
..+..||+.++++.+++.|. .+.|+|..+..+++..+++. ++.++|..+|. ..+ .+ -
T Consensus 82 ~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~---~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~C 158 (256)
T KOG3120|consen 82 SIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAA---GIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLC 158 (256)
T ss_pred cCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHc---cHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcC
Confidence 45788999999999999985 99999999999999999999 67777887772 111 11 1
Q ss_pred C----CHHHHHHHHHH---cCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcC
Q 010820 434 R----ETPSYVEITNS---LGVDKPSEILFVTDVYQEATAAKAAGLEVVISIR 479 (500)
Q Consensus 434 P----~p~~~~~~l~~---l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~ 479 (500)
| +..++.++... -|+. .++.+||||+.+|+-+-....-.-+...|
T Consensus 159 PsNmCKg~Vl~~~~~s~~~~gv~-yer~iYvGDG~nD~CP~l~Lr~~D~ampR 210 (256)
T KOG3120|consen 159 PSNMCKGLVLDELVASQLKDGVR-YERLIYVGDGANDFCPVLRLRACDVAMPR 210 (256)
T ss_pred chhhhhhHHHHHHHHHHhhcCCc-eeeEEEEcCCCCCcCcchhcccCceeccc
Confidence 2 33333333332 2665 77999999999999888776554444444
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.36 E-value=7.9e-07 Score=84.19 Aligned_cols=83 Identities=14% Similarity=0.091 Sum_probs=58.4
Q ss_pred EEEEEcCCcHHHHHHHHhccCccccccc-ccccccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCC
Q 010820 394 KVYIYSSGSRLAQRLIFGNSNYGDLRKY-LSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGL 472 (500)
Q Consensus 394 ~l~v~Tn~~~~~~~~~l~~~~~~~l~~~-f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~ 472 (500)
...+.+..........++.++.. +... ....++......+|...+..++++++++ ++++++|||+.||+.+++.+|+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~-~~~~i~~GD~~NDi~m~~~ag~ 186 (225)
T TIGR01482 109 LVKMRYGIDVDTVREIIKELGLN-LVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIK-PGETLVCGDSENDIDLFEVPGF 186 (225)
T ss_pred eEEEeecCCHHHHHHHHHhcCce-EEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCC-HHHEEEECCCHhhHHHHHhcCc
Confidence 34555555666667777776321 1100 0112244445567889999999999998 9999999999999999999999
Q ss_pred cEEEEc
Q 010820 473 EVVISI 478 (500)
Q Consensus 473 ~~i~v~ 478 (500)
.++.-+
T Consensus 187 ~vam~N 192 (225)
T TIGR01482 187 GVAVAN 192 (225)
T ss_pred eEEcCC
Confidence 765554
|
catalyze the same reaction as SPP. |
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=98.35 E-value=3.7e-07 Score=84.31 Aligned_cols=107 Identities=18% Similarity=0.157 Sum_probs=61.9
Q ss_pred CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHH----HHHHHHhccCcccccccccccc-cccccCCCCHHHHHHHHHHc
Q 010820 372 ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRL----AQRLIFGNSNYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSL 446 (500)
Q Consensus 372 ~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~----~~~~~l~~~~~~~l~~~f~~~~-d~~~~~KP~p~~~~~~l~~l 446 (500)
....+++||+.++|++|.+.|+.+.++|..+.. ......+.+ ..+|...+ +.....+.+. .+
T Consensus 69 f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl-----~~hf~~i~~~~~~~~~~K~--------~v 135 (191)
T PF06941_consen 69 FSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWL-----ERHFPFIPYDNLIFTGDKT--------LV 135 (191)
T ss_dssp TTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHH-----HHHHTHHHHCCEEEESSGG--------GC
T ss_pred hcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHH-----HHHcCCCchheEEEecCCC--------eE
Confidence 345789999999999999999778877776543 123333323 22233222 2211112221 22
Q ss_pred CCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccC
Q 010820 447 GVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE 499 (500)
Q Consensus 447 ~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e 499 (500)
+.+ ++|+|++..+..+...|+.++.++.++++... ....+.|..|
T Consensus 136 ~~D-----vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~---~~~Rv~~W~e 180 (191)
T PF06941_consen 136 GGD-----VLIDDRPHNLEQFANAGIPVILFDQPYNRDES---NFPRVNNWEE 180 (191)
T ss_dssp --S-----EEEESSSHHHSS-SSESSEEEEE--GGGTT-----TSEEE-STTS
T ss_pred ecc-----EEecCChHHHHhccCCCceEEEEcCCCCCCCC---CCccCCCHHH
Confidence 333 89999999999999999999999998776544 3466666655
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=98.34 E-value=2.9e-07 Score=82.50 Aligned_cols=96 Identities=14% Similarity=0.106 Sum_probs=79.1
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccc-cccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~-~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
....||+.++|++|.+. +.++|.|++.+.++..+++.+ +... +|...+ +.....+|+ |.+.+++++.+ +
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~l---dp~~~~f~~~l~r~~~~~~~~~---~~K~L~~l~~~-~ 112 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDIL---DRGGKVISRRLYRESCVFTNGK---YVKDLSLVGKD-L 112 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHH---CcCCCEEeEEEEccccEEeCCC---EEeEchhcCCC-h
Confidence 46889999999999987 999999999999999999998 4443 565555 333333555 77889999997 9
Q ss_pred CcEEEEeCCHhhHHHHHHcCCcEEEEc
Q 010820 452 SEILFVTDVYQEATAAKAAGLEVVISI 478 (500)
Q Consensus 452 ~~~l~VGDs~~Di~aA~~aG~~~i~v~ 478 (500)
++++||||++.++.++..+|+......
T Consensus 113 ~~vIiVDD~~~~~~~~~~NgI~i~~f~ 139 (162)
T TIGR02251 113 SKVIIIDNSPYSYSLQPDNAIPIKSWF 139 (162)
T ss_pred hhEEEEeCChhhhccCccCEeecCCCC
Confidence 999999999999999999998876655
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.34 E-value=7.7e-07 Score=95.72 Aligned_cols=104 Identities=9% Similarity=0.048 Sum_probs=75.0
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcE
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 454 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~ 454 (500)
.+++||+.++|++|+++|++++++||......+.+.+.+|+ . +|. .. ..+++++. ++++..+ +++|
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi---~-~~~----~~-~p~~K~~~----v~~l~~~-~~~v 469 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGI---N-VRA----EV-LPDDKAAL----IKELQEK-GRVV 469 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCC---c-EEc----cC-ChHHHHHH----HHHHHHc-CCEE
Confidence 46899999999999999999999999999999999999954 2 222 11 12334444 4444445 8899
Q ss_pred EEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeC
Q 010820 455 LFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTIN 495 (500)
Q Consensus 455 l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~ 495 (500)
+||||+.+|+.+++++|+. +.++...+.....+|+++.
T Consensus 470 ~~VGDg~nD~~al~~A~vg---ia~g~g~~~a~~~Advvl~ 507 (562)
T TIGR01511 470 AMVGDGINDAPALAQADVG---IAIGAGTDVAIEAADVVLM 507 (562)
T ss_pred EEEeCCCccHHHHhhCCEE---EEeCCcCHHHHhhCCEEEe
Confidence 9999999999999999963 4444222222223477773
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=98.33 E-value=5.1e-07 Score=86.30 Aligned_cols=50 Identities=24% Similarity=0.325 Sum_probs=45.6
Q ss_pred ccCCCCHHHHHHHHHHcCCCCCCcE-EEEeCCH-hhHHHHHHcCCcEEEEcCC
Q 010820 430 VGNKRETPSYVEITNSLGVDKPSEI-LFVTDVY-QEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 430 ~~~KP~p~~~~~~l~~l~v~~p~~~-l~VGDs~-~Di~aA~~aG~~~i~v~~~ 480 (500)
...||+|++|+.++++++++ ++++ +||||+. +||.+|+++|+++++|.++
T Consensus 185 ~~~KP~~~~~~~~~~~~~~~-~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 185 VVGKPSPAIYRAALNLLQAR-PERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred eecCCCHHHHHHHHHHhCCC-CccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 35799999999999999998 7776 9999998 8999999999999999764
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.22 E-value=3.7e-06 Score=79.13 Aligned_cols=81 Identities=17% Similarity=0.218 Sum_probs=58.5
Q ss_pred EEEEEcCCcHHHHHHHHhccCccccccccccc-ccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCC
Q 010820 394 KVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGF-FDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGL 472 (500)
Q Consensus 394 ~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~-~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~ 472 (500)
.+.+.++.........++.. ++..+.... ++.......+...++.++++++++ ++++++|||+.+|+.+++.+|+
T Consensus 109 ~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~-~~~~i~iGDs~ND~~ml~~ag~ 184 (215)
T TIGR01487 109 LVIMREGKDVDEVREIIKER---GLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIK-PEEVAAIGDSENDIDLFRVVGF 184 (215)
T ss_pred EEEecCCccHHHHHHHHHhC---CeEEEecCceEEEecCCCChHHHHHHHHHHhCCC-HHHEEEECCCHHHHHHHHhCCC
Confidence 34455666666667677665 333333222 233333455788999999999998 9999999999999999999998
Q ss_pred cEEEEc
Q 010820 473 EVVISI 478 (500)
Q Consensus 473 ~~i~v~ 478 (500)
.++.-+
T Consensus 185 ~vam~n 190 (215)
T TIGR01487 185 KVAVAN 190 (215)
T ss_pred eEEcCC
Confidence 876655
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.22 E-value=1.3e-05 Score=78.29 Aligned_cols=90 Identities=12% Similarity=0.024 Sum_probs=59.0
Q ss_pred HHHHhCCcEEEEE---cCCcHHHHHHHHhccCcccccccccccc-cccccCCCCHHHHHHHHHHcCCCCC-CcEEEEeCC
Q 010820 386 EKWHSLGTKVYIY---SSGSRLAQRLIFGNSNYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSLGVDKP-SEILFVTDV 460 (500)
Q Consensus 386 ~~L~~~G~~l~v~---Tn~~~~~~~~~l~~~~~~~l~~~f~~~~-d~~~~~KP~p~~~~~~l~~l~v~~p-~~~l~VGDs 460 (500)
+.++..++...++ ++.........++.. ++.-.....+ +..... .+...+.++++.++++ + +++++|||+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~~i~-~~~~v~~~GDs 216 (273)
T PRK00192 142 RLAKDREFSEPFLWNGSEAAKERFEEALKRL---GLKVTRGGRFLHLLGGG-DKGKAVRWLKELYRRQ-DGVETIALGDS 216 (273)
T ss_pred HHHHhcccCCceeecCchHHHHHHHHHHHHc---CCEEEECCeEEEEeCCC-CHHHHHHHHHHHHhcc-CCceEEEEcCC
Confidence 3344555554444 433344444444443 2221111222 333344 6777899999999998 9 999999999
Q ss_pred HhhHHHHHHcCCcEEEEcCC
Q 010820 461 YQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 461 ~~Di~aA~~aG~~~i~v~~~ 480 (500)
.||+.+++.+|+.++.-|..
T Consensus 217 ~NDi~m~~~ag~~vam~NA~ 236 (273)
T PRK00192 217 PNDLPMLEAADIAVVVPGPD 236 (273)
T ss_pred hhhHHHHHhCCeeEEeCCCC
Confidence 99999999999988877754
|
|
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.21 E-value=9.2e-07 Score=84.23 Aligned_cols=118 Identities=12% Similarity=0.116 Sum_probs=80.0
Q ss_pred CCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccc---ccccc--cccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 378 FDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY---LSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 378 ~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~---f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
|+-...+++.|.+-+. +.++||.+.... ......+.|--.+ +.... +....+||++.++..++++++++ |+
T Consensus 167 y~KL~kA~~yLqnP~c-lflatn~D~~~p--~~~~~~ipG~G~~v~av~~~t~R~P~v~GKP~~~m~~~l~~~~~i~-ps 242 (306)
T KOG2882|consen 167 YPKLMKALNYLQNPGC-LFLATNRDATTP--PTPGVEIPGAGSFVAAVKFATGRQPIVLGKPSTFMFEYLLEKFNID-PS 242 (306)
T ss_pred HHHHHHHHHHhCCCCc-EEEeccCccccC--CCCCeeccCCccHHHHHHHHhcCCCeecCCCCHHHHHHHHHHcCCC-cc
Confidence 4456668888886666 778998765333 1111111121112 11111 23456799999999999999999 99
Q ss_pred cEEEEeCCH-hhHHHHHHcCCcEEEEcCCCCCCC--------CCCCCceeeCCccC
Q 010820 453 EILFVTDVY-QEATAAKAAGLEVVISIRPGNGPL--------PENHGFKTINSFAE 499 (500)
Q Consensus 453 ~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~--------~~~~~~~~i~~l~e 499 (500)
+++||||+. .||.-+++.|++++++-.+.+... ....+||+++++.+
T Consensus 243 Rt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d 298 (306)
T KOG2882|consen 243 RTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGD 298 (306)
T ss_pred eEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHH
Confidence 999999998 899999999999999998844221 11123777776654
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=5.8e-06 Score=79.56 Aligned_cols=80 Identities=18% Similarity=0.168 Sum_probs=60.5
Q ss_pred CCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccc-cccC------------------CC-----
Q 010820 379 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT-AVGN------------------KR----- 434 (500)
Q Consensus 379 pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~-~~~~------------------KP----- 434 (500)
|++.++|++|+++|++++|+||+.+..+...++.+ ++..+|+.+... .... ||
T Consensus 151 p~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~l---gL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~ 227 (303)
T PHA03398 151 PFVYDSLDELKERGCVLVLWSYGNREHVVHSLKET---KLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDV 227 (303)
T ss_pred hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHc---CCCccccEEEECCCcccccccceeecccceeEEecCceeEeC
Confidence 78899999999999999999999999999999999 556666544411 1011 12
Q ss_pred --------CHHHHHHHHHHcCCCCCCcEEEEeCCH
Q 010820 435 --------ETPSYVEITNSLGVDKPSEILFVTDVY 461 (500)
Q Consensus 435 --------~p~~~~~~l~~l~v~~p~~~l~VGDs~ 461 (500)
.|.+....+++.|+.--+.+-.|+|-.
T Consensus 228 ~~~~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~ 262 (303)
T PHA03398 228 TDVKNLPKSPRVVLWYLRKKGVNYFKTITLVDDLK 262 (303)
T ss_pred CcccCCCCCCeehHHHHHHcCcceeccEEEeccCc
Confidence 567777888888886456677788776
|
|
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.17 E-value=3.3e-06 Score=69.93 Aligned_cols=87 Identities=18% Similarity=0.152 Sum_probs=67.1
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCH---HHHHHHHHHc----
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRET---PSYVEITNSL---- 446 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p---~~~~~~l~~l---- 446 (500)
...+||.++++|+++|.+|+-++.+|=+...-....+..+ ++.+||+..+ .+|+| .|+-++++.+
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral---~~~~yFhy~V-----iePhP~K~~ML~~llr~i~~er 110 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRAL---DLLQYFHYIV-----IEPHPYKFLMLSQLLREINTER 110 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHh---chhhhEEEEE-----ecCCChhHHHHHHHHHHHHHhh
Confidence 4579999999999999999999999988888888888888 7778887555 35544 3555555554
Q ss_pred --CCCCCCcEEEEeCCHhhHHHHHH
Q 010820 447 --GVDKPSEILFVTDVYQEATAAKA 469 (500)
Q Consensus 447 --~v~~p~~~l~VGDs~~Di~aA~~ 469 (500)
.++ |++++|++|....+.--..
T Consensus 111 ~~~ik-P~~Ivy~DDR~iH~~~Iwe 134 (164)
T COG4996 111 NQKIK-PSEIVYLDDRRIHFGNIWE 134 (164)
T ss_pred ccccC-cceEEEEecccccHHHHHH
Confidence 456 9999999999855544433
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.14 E-value=6e-06 Score=68.55 Aligned_cols=113 Identities=16% Similarity=0.205 Sum_probs=90.5
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcE
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 454 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~ 454 (500)
..+|+.+.+.|++|++. +.++|+|+..........+-.|+ . ....| .-.++++-.++++.++-. .+.|
T Consensus 29 Gklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi---~--~~rv~-----a~a~~e~K~~ii~eLkk~-~~k~ 96 (152)
T COG4087 29 GKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGI---P--VERVF-----AGADPEMKAKIIRELKKR-YEKV 96 (152)
T ss_pred cEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCC---c--eeeee-----cccCHHHHHHHHHHhcCC-CcEE
Confidence 47999999999999999 99999999999998888866632 1 11222 234777888899999875 8999
Q ss_pred EEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccC
Q 010820 455 LFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE 499 (500)
Q Consensus 455 l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e 499 (500)
+||||..||+.+-+++.+..+-+...+..+.....+|+++.+..|
T Consensus 97 vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e 141 (152)
T COG4087 97 VMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAE 141 (152)
T ss_pred EEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHH
Confidence 999999999999999999888887766665655666888877654
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=98.13 E-value=3.4e-06 Score=84.35 Aligned_cols=70 Identities=17% Similarity=0.082 Sum_probs=55.3
Q ss_pred cCCCCHHHHHHHHHHc--------CCC----CCCcEEEEeCCH-hhHHHHHHcCCcEEEEcCC-CCCCCC--CCCCceee
Q 010820 431 GNKRETPSYVEITNSL--------GVD----KPSEILFVTDVY-QEATAAKAAGLEVVISIRP-GNGPLP--ENHGFKTI 494 (500)
Q Consensus 431 ~~KP~p~~~~~~l~~l--------~v~----~p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~-~~~~~~--~~~~~~~i 494 (500)
.+||++.+|+.+++.+ +++ ++++++||||++ .||.+|+++||.+++|.+| ...... ...+++++
T Consensus 231 ~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~vv 310 (321)
T TIGR01456 231 LGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTLIV 310 (321)
T ss_pred cCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCEEE
Confidence 4799999999999888 432 257999999998 9999999999999999887 222221 22348999
Q ss_pred CCccCC
Q 010820 495 NSFAEI 500 (500)
Q Consensus 495 ~~l~el 500 (500)
+|+.|+
T Consensus 311 ~~l~e~ 316 (321)
T TIGR01456 311 NDVFDA 316 (321)
T ss_pred CCHHHH
Confidence 998764
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=8.8e-06 Score=91.86 Aligned_cols=86 Identities=16% Similarity=0.262 Sum_probs=71.2
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEE
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 455 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l 455 (500)
+++||+.++|++|+++|++++++|+........+.+.+ ++.++|.... |+--.+++++++.. +++++
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~l---gi~~~~~~~~---------p~~K~~~i~~l~~~-~~~v~ 716 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEA---GIDEVIAGVL---------PDGKAEAIKRLQSQ-GRQVA 716 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc---CCCEEEeCCC---------HHHHHHHHHHHhhc-CCEEE
Confidence 78899999999999999999999999999999999998 4444443221 22345677788877 88999
Q ss_pred EEeCCHhhHHHHHHcCCcE
Q 010820 456 FVTDVYQEATAAKAAGLEV 474 (500)
Q Consensus 456 ~VGDs~~Di~aA~~aG~~~ 474 (500)
||||+.||+.+++++|+..
T Consensus 717 ~vGDg~nD~~al~~Agvgi 735 (834)
T PRK10671 717 MVGDGINDAPALAQADVGI 735 (834)
T ss_pred EEeCCHHHHHHHHhCCeeE
Confidence 9999999999999999933
|
|
| >PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3 | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00012 Score=75.63 Aligned_cols=103 Identities=17% Similarity=0.180 Sum_probs=72.6
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcc------cccccccccccccccCCC--------------
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYG------DLRKYLSGFFDTAVGNKR-------------- 434 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~------~l~~~f~~~~d~~~~~KP-------------- 434 (500)
...-|.+..+|++||++|-++.++||+...++...+..+-.. ++.++||-++ +...||
T Consensus 182 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVI--v~A~KP~FF~~~~pfr~vd~ 259 (448)
T PF05761_consen 182 IHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVI--VDARKPGFFTEGRPFREVDT 259 (448)
T ss_dssp EE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEE--ES--CCHHHCT---EEEEET
T ss_pred ccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEE--EcCCCCcccCCCCceEEEEC
Confidence 345688999999999999999999999999999999888555 6777787666 122344
Q ss_pred --------------------CHHHHHHHHHHcCCCCCCcEEEEeCCH-hhHHHHHHc-CCcEEEEcCC
Q 010820 435 --------------------ETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAA-GLEVVISIRP 480 (500)
Q Consensus 435 --------------------~p~~~~~~l~~l~v~~p~~~l~VGDs~-~Di~aA~~a-G~~~i~v~~~ 480 (500)
.---.....+.++.. .++++||||+. .||...+.. ||.|+.|.+.
T Consensus 260 ~~g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~-g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~E 326 (448)
T PF05761_consen 260 ETGKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWR-GKEVLYFGDHIYGDILKSKKRHGWRTAAIIPE 326 (448)
T ss_dssp TTSSEECS---SS--TC-EEEE--HHHHHHHCT---GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TT
T ss_pred CCCccccccccccccCCCEeecCCHHHHHHHHccC-CCeEEEECCchhhhhhhhccccceEEEEEehh
Confidence 111345667778888 89999999998 899988886 9999999754
|
1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A .... |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.0001 Score=65.05 Aligned_cols=93 Identities=15% Similarity=0.064 Sum_probs=65.0
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc----------------cccccCCCCHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF----------------DTAVGNKRETPS 438 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~----------------d~~~~~KP~p~~ 438 (500)
..+-||.+++++++++++++.+|+|+|....+..+++.....+-....+-++ +....+..++..
T Consensus 72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~v 151 (220)
T COG4359 72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSSV 151 (220)
T ss_pred cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcchh
Confidence 5688999999999999999999999999999999998885221111121111 011111223333
Q ss_pred HHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCC
Q 010820 439 YVEITNSLGVDKPSEILFVTDVYQEATAAKAAGL 472 (500)
Q Consensus 439 ~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~ 472 (500)
.+.+.-. ++.++|.||+..|+.+|+....
T Consensus 152 ----I~~l~e~-~e~~fy~GDsvsDlsaaklsDl 180 (220)
T COG4359 152 ----IHELSEP-NESIFYCGDSVSDLSAAKLSDL 180 (220)
T ss_pred ----HHHhhcC-CceEEEecCCcccccHhhhhhh
Confidence 3444444 8889999999999999988655
|
|
| >KOG3699 consensus Cytoskeletal protein Adducin [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=97.88 E-value=1.1e-05 Score=83.19 Aligned_cols=176 Identities=19% Similarity=0.225 Sum_probs=117.2
Q ss_pred HcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCC-CCCCCCCCCChHHHHH
Q 010820 43 TLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPY-PHKPPKCSDCAPLFMK 121 (500)
Q Consensus 43 ~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~-~~~p~~~S~e~~~H~~ 121 (500)
..+|..++.+++.+|+.+ +-+..-++++|.+..+.+....+...+|.+|....+....-- ..+ +.-...|.+
T Consensus 363 ~~~~ne~s~~~~pVrIed---P~qfvp~~~NP~Evle~rnkIreqnr~D~ksAGPQSqlL~~V~~e~----s~~~~~~Sa 435 (598)
T KOG3699|consen 363 KEDWNEGSASHTPVRIED---PNQFVPLLINPKEVLEMRNKIREQNRQDVKSAGPQSQLLASVTAEK----SRSLSTHSA 435 (598)
T ss_pred eccccccccCCceeeccC---CCCccccccCHHHHHHHHhhHHHhhhccccccCCCcceecceeccc----ccccchhhh
Confidence 346888999999999864 123347999999999999999999999998765543211000 011 222448999
Q ss_pred HHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCc-ccCcceeeeeeCCCCchhHHHHHHHHHhhCCC
Q 010820 122 AYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHG-YYDELVVPIIENTAYENELTDSLAKAIDAYPK 199 (500)
Q Consensus 122 iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~vp~~~~~~~~~~l~~~v~~~l~~~~~ 199 (500)
|++.+ +++||+|.|.+....-++... .+.....+..+ .+.+ +++...++.- ++.. + +.+. .
T Consensus 436 i~~~r~e~k~v~h~~~~pnpf~~ltd~---eL~EYkqever--k~~~~~~d~d~~~~d---~~e~--a----kd~~---~ 498 (598)
T KOG3699|consen 436 IHQVRPEVKCVCHRHYPPNPFVSLTDH---ELLEYKQEVER--KGKGVYHDYDGILSD---PGEQ--A----KDLA---D 498 (598)
T ss_pred hhhcCCcccceeecccCCCcccccCch---hhhhhhhhhhc--cCccccccccccccc---cccc--c----cccc---c
Confidence 99999 999999999998866666543 22211222221 1211 2221112221 1111 1 2233 3
Q ss_pred ccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 010820 200 ATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDW 244 (500)
Q Consensus 200 ~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~ 244 (500)
.+ ++++|||+.+.|++++ |...+...|-+|+.+.....++.+.
T Consensus 499 ~p-v~~~nh~i~Tq~~~V~-aa~~~sl~~~a~~~q~s~as~~~~~ 541 (598)
T KOG3699|consen 499 SP-VILRNHGIMTQGESVE-AAYLLSLMELACETQLSIASATAPG 541 (598)
T ss_pred CC-cccccccceecccccc-cchhhHHHHHHHHhhhhhccccCCC
Confidence 57 9999999999999999 8888999999999998877776553
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=97.83 E-value=4.6e-05 Score=72.22 Aligned_cols=90 Identities=16% Similarity=0.134 Sum_probs=56.2
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCc---HHHHHHHHhccCcccccccccccccccccC---CC-CHHHHHHHHHHcC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGS---RLAQRLIFGNSNYGDLRKYLSGFFDTAVGN---KR-ETPSYVEITNSLG 447 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~---~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~---KP-~p~~~~~~l~~l~ 447 (500)
.+++||+.++++.++++|+.++++||.+ +.....-|.+.|+.++..++-..... ... .. +..-...+.++ |
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~-~~~~~~~~yK~~~r~~i~~~-G 191 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKD-PSKKSAVEYKSERRKEIEKK-G 191 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESS-TSS------SHHHHHHHHHT-T
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccc-cccccccccchHHHHHHHHc-C
Confidence 3799999999999999999999999966 44555667677533333322111111 001 01 33444444444 3
Q ss_pred CCCCCcEEEEeCCHhhHHHHHH
Q 010820 448 VDKPSEILFVTDVYQEATAAKA 469 (500)
Q Consensus 448 v~~p~~~l~VGDs~~Di~aA~~ 469 (500)
.. =+++|||..+|+..++.
T Consensus 192 y~---Ii~~iGD~~~D~~~~~~ 210 (229)
T PF03767_consen 192 YR---IIANIGDQLSDFSGAKT 210 (229)
T ss_dssp EE---EEEEEESSGGGCHCTHH
T ss_pred Cc---EEEEeCCCHHHhhcccc
Confidence 32 35789999999998443
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.83 E-value=2.9e-05 Score=88.14 Aligned_cols=117 Identities=16% Similarity=0.108 Sum_probs=85.9
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc------------------cccccCCCCHH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF------------------DTAVGNKRETP 437 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~------------------d~~~~~KP~p~ 437 (500)
+++||+.++|+.|++.|+++.++|+........+.+..|+ ...+.... +......+.|+
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi---~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~ 604 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGM---PSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPE 604 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC---CCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHH
Confidence 7899999999999999999999999999999999999954 33222111 01123456777
Q ss_pred HHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCC-CCCCCCCceee--CCccC
Q 010820 438 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNG-PLPENHGFKTI--NSFAE 499 (500)
Q Consensus 438 ~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~-~~~~~~~~~~i--~~l~e 499 (500)
--..+.+.++-. .+.++||||+.||+.+.+++++ ++..+... +.....+|+++ +||+.
T Consensus 605 ~K~~iv~~lq~~-g~~v~mvGDGvND~pAl~~AdV---Gia~g~~g~~va~~aaDivl~dd~~~~ 665 (884)
T TIGR01522 605 HKMKIVKALQKR-GDVVAMTGDGVNDAPALKLADI---GVAMGQTGTDVAKEAADMILTDDDFAT 665 (884)
T ss_pred HHHHHHHHHHHC-CCEEEEECCCcccHHHHHhCCe---eEecCCCcCHHHHHhcCEEEcCCCHHH
Confidence 778888888776 7899999999999999999995 44444222 12223448887 44543
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=97.80 E-value=4.8e-05 Score=62.35 Aligned_cols=84 Identities=12% Similarity=0.068 Sum_probs=48.9
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHH---HHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRL---AQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~---~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
.++||+.++|+.|+++|.++.++||++.. .....++.+| +.--.+.++. ........+++. .. ..
T Consensus 14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~G---i~~~~~~i~t-------s~~~~~~~l~~~-~~-~~ 81 (101)
T PF13344_consen 14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLG---IPVDEDEIIT-------SGMAAAEYLKEH-KG-GK 81 (101)
T ss_dssp EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTT---TT--GGGEEE-------HHHHHHHHHHHH-TT-SS
T ss_pred CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcC---cCCCcCEEEC-------hHHHHHHHHHhc-CC-CC
Confidence 38999999999999999999999998743 3444456663 2211222221 233444444443 22 55
Q ss_pred cEEEEeCCHhhHHHHHHcCC
Q 010820 453 EILFVTDVYQEATAAKAAGL 472 (500)
Q Consensus 453 ~~l~VGDs~~Di~aA~~aG~ 472 (500)
.+++||-. ...+..+.+|+
T Consensus 82 ~v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 82 KVYVLGSD-GLREELREAGF 100 (101)
T ss_dssp EEEEES-H-HHHHHHHHTTE
T ss_pred EEEEEcCH-HHHHHHHHcCC
Confidence 88888854 44444555553
|
... |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00012 Score=70.58 Aligned_cols=53 Identities=15% Similarity=0.162 Sum_probs=46.3
Q ss_pred cccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 427 DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 427 d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
+......+|...++.++++++++ +++|++|||+.||+.+.+.++..++.+...
T Consensus 160 di~~~~~~K~~al~~l~~~~~i~-~~~~i~~GD~~ND~~ml~~~~~~~va~~na 212 (249)
T TIGR01485 160 DILPQGSGKGQALQYLLQKLAME-PSQTLVCGDSGNDIELFEIGSVRGVIVSNA 212 (249)
T ss_pred EEEeCCCChHHHHHHHHHHcCCC-ccCEEEEECChhHHHHHHccCCcEEEECCC
Confidence 44556788999999999999998 999999999999999999988778877654
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00019 Score=70.02 Aligned_cols=43 Identities=9% Similarity=0.232 Sum_probs=39.1
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEc
Q 010820 435 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISI 478 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~ 478 (500)
|...++.+++.+|++ +++++.|||+.||+++-+.+|...+.-+
T Consensus 189 Kg~al~~l~~~~gi~-~~~v~afGD~~NDi~Ml~~ag~~vAm~N 231 (272)
T PRK15126 189 KGAALAVLSQHLGLS-LADCMAFGDAMNDREMLGSVGRGFIMGN 231 (272)
T ss_pred hHHHHHHHHHHhCCC-HHHeEEecCCHHHHHHHHHcCCceeccC
Confidence 888999999999998 9999999999999999999998665554
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00025 Score=63.10 Aligned_cols=96 Identities=10% Similarity=0.104 Sum_probs=61.0
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHH---HHHhcc---Cccccc--cccc---ccc----cccccCCC---CHHH
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQR---LIFGNS---NYGDLR--KYLS---GFF----DTAVGNKR---ETPS 438 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~---~~l~~~---~~~~l~--~~f~---~~~----d~~~~~KP---~p~~ 438 (500)
..|++.+++++|+++|+++.++|+.+..... ..++.+ +. ++. ..+. ..+ ......+| +.+.
T Consensus 28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~-~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~~~ 106 (157)
T smart00775 28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGH-NLPHGPVLLSPDRLFAALHREVISKKPEVFKIAC 106 (157)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccc-cCCCceEEEcCCcchhhhhcccccCCHHHHHHHH
Confidence 4688999999999999999999999876663 455441 10 111 1110 011 11223445 5566
Q ss_pred HHHHHHHcCCCCCCcE-EEEeCCHhhHHHHHHcCCcE
Q 010820 439 YVEITNSLGVDKPSEI-LFVTDVYQEATAAKAAGLEV 474 (500)
Q Consensus 439 ~~~~l~~l~v~~p~~~-l~VGDs~~Di~aA~~aG~~~ 474 (500)
...+.+.+.-. .-.. +-+||+.+|+++=+++|+..
T Consensus 107 l~~i~~~~~~~-~~~f~~~~gn~~~D~~~y~~~gi~~ 142 (157)
T smart00775 107 LRDIKSLFPPQ-GNPFYAGFGNRITDVISYSAVGIPP 142 (157)
T ss_pred HHHHHHhcCCC-CCCEEEEeCCCchhHHHHHHcCCCh
Confidence 66766665422 2233 33778899999999999987
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00034 Score=68.59 Aligned_cols=87 Identities=16% Similarity=0.241 Sum_probs=55.3
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCc---HHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCc
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGS---RLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 453 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~---~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~ 453 (500)
++||+.++|++|+++|.+++++||++ +......++.+| +....+.++ +........+++.... +.+
T Consensus 19 ~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G---~~~~~~~i~-------ts~~~~~~~l~~~~~~-~~~ 87 (279)
T TIGR01452 19 VVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLG---FNGLAEQLF-------SSALCAARLLRQPPDA-PKA 87 (279)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcC---CCCChhhEe-------cHHHHHHHHHHhhCcC-CCE
Confidence 78889999999999999999999976 333334555663 221112211 1233444555664444 678
Q ss_pred EEEEeCCHhhHHHHHHcCCcEE
Q 010820 454 ILFVTDVYQEATAAKAAGLEVV 475 (500)
Q Consensus 454 ~l~VGDs~~Di~aA~~aG~~~i 475 (500)
++++|+.. ..+..+..|+..+
T Consensus 88 v~~iG~~~-~~~~l~~~g~~~~ 108 (279)
T TIGR01452 88 VYVIGEEG-LRAELDAAGIRLA 108 (279)
T ss_pred EEEEcCHH-HHHHHHHCCCEEe
Confidence 99999863 3445567787754
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.0004 Score=65.15 Aligned_cols=97 Identities=11% Similarity=0.084 Sum_probs=57.8
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHH---HHHHHhccCcccccccccccccccccCCC----CHHHHHHHHHHc
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLA---QRLIFGNSNYGDLRKYLSGFFDTAVGNKR----ETPSYVEITNSL 446 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~---~~~~l~~~~~~~l~~~f~~~~d~~~~~KP----~p~~~~~~l~~l 446 (500)
+.++.|++.++++.|+++|++++++||.+... ...-|.+.|+.++..++-.-. ....|+ |.+...++.+ -
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~~--~d~~~~~~~yKs~~R~~l~~-~ 194 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRGL--EDSNKTVVTYKSEVRKSLME-E 194 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecCC--CCCCchHhHHHHHHHHHHHh-C
Confidence 45799999999999999999999999998655 556666775443322211111 111222 2223322221 1
Q ss_pred CCCCCCcEEEEeCCHhhHHHHHHcCCcEEEE
Q 010820 447 GVDKPSEILFVTDVYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 447 ~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v 477 (500)
|. .=+..|||..+|+.+. .+|.++.-+
T Consensus 195 GY---rIv~~iGDq~sDl~G~-~~~~RtFKL 221 (229)
T TIGR01675 195 GY---RIWGNIGDQWSDLLGS-PPGRRTFKL 221 (229)
T ss_pred Cc---eEEEEECCChHHhcCC-CccCceeeC
Confidence 22 1346689999999653 344444443
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00024 Score=68.98 Aligned_cols=49 Identities=16% Similarity=0.219 Sum_probs=42.4
Q ss_pred ccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcC
Q 010820 430 VGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIR 479 (500)
Q Consensus 430 ~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~ 479 (500)
...--|....+.++++++++ +++++.|||+.||+++-+.+|...+.-+.
T Consensus 185 ~~g~~K~~al~~l~~~lgi~-~~~v~afGD~~ND~~Ml~~ag~gvam~Na 233 (264)
T COG0561 185 PKGVSKGYALQRLAKLLGIK-LEEVIAFGDSTNDIEMLEVAGLGVAMGNA 233 (264)
T ss_pred cCCCchHHHHHHHHHHhCCC-HHHeEEeCCccccHHHHHhcCeeeeccCC
Confidence 33445888999999999998 99999999999999999999987766654
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00058 Score=66.54 Aligned_cols=51 Identities=16% Similarity=0.289 Sum_probs=43.2
Q ss_pred cccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEc
Q 010820 427 DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISI 478 (500)
Q Consensus 427 d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~ 478 (500)
|.....-.|...++.+++.+|++ +++++.|||+.||+++.+.+|...+.-+
T Consensus 189 eI~~~gvsKg~al~~l~~~~gi~-~~~v~afGD~~NDi~Ml~~ag~~vAm~N 239 (270)
T PRK10513 189 EILDKRVNKGTGVKSLAEHLGIK-PEEVMAIGDQENDIAMIEYAGVGVAMGN 239 (270)
T ss_pred EEeCCCCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHHhCCceEEecC
Confidence 44444455889999999999998 9999999999999999999999666554
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00043 Score=66.05 Aligned_cols=49 Identities=16% Similarity=0.156 Sum_probs=42.7
Q ss_pred cccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 010820 427 DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 427 d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
+......+|+..+..++++++++ ++++++|||+.||+.+.+.+|...+.
T Consensus 152 ei~~~~~~K~~al~~l~~~~g~~-~~~~i~~GD~~nD~~ml~~~~~~iav 200 (236)
T TIGR02471 152 DVLPLRASKGLALRYLSYRWGLP-LEQILVAGDSGNDEEMLRGLTLGVVV 200 (236)
T ss_pred EEeeCCCChHHHHHHHHHHhCCC-HHHEEEEcCCccHHHHHcCCCcEEEE
Confidence 44555688999999999999998 99999999999999999999876654
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00042 Score=77.09 Aligned_cols=84 Identities=19% Similarity=0.210 Sum_probs=65.9
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCC--CHHHHHHHHHHcCCCCCCc
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKR--ETPSYVEITNSLGVDKPSE 453 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP--~p~~~~~~l~~l~v~~p~~ 453 (500)
+++||+.++|++|+++|++++++|+........+.+.+|+ ..++ + ..| |++ ++++++ . +..
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi---~~~~----~----~~p~~K~~----~v~~l~-~-~~~ 630 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGI---DFRA----G----LLPEDKVK----AVTELN-Q-HAP 630 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC---Ceec----C----CCHHHHHH----HHHHHh-c-CCC
Confidence 7899999999999999999999999999999999999953 2212 1 122 333 445555 3 568
Q ss_pred EEEEeCCHhhHHHHHHcCCcEEE
Q 010820 454 ILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 454 ~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
++||||+.||..+.+.+++...+
T Consensus 631 v~mvGDgiNDapAl~~A~vgia~ 653 (741)
T PRK11033 631 LAMVGDGINDAPAMKAASIGIAM 653 (741)
T ss_pred EEEEECCHHhHHHHHhCCeeEEe
Confidence 99999999999999999954433
|
|
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0048 Score=59.29 Aligned_cols=104 Identities=14% Similarity=0.269 Sum_probs=73.2
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHH---HhccCcccccccc-c--ccc----------------cc--cccC
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLI---FGNSNYGDLRKYL-S--GFF----------------DT--AVGN 432 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~---l~~~~~~~l~~~f-~--~~~----------------d~--~~~~ 432 (500)
.-+.+.+++..|.++|+++..+|.......... |+.+|+ ++.... . .++ +. ....
T Consensus 82 ie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi-~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~ 160 (252)
T PF11019_consen 82 IESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGI-DFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGG 160 (252)
T ss_pred cchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCC-CccccccccCcceecccccCCCCCCceeecCeEEeCC
Confidence 447889999999999999999999886655444 444443 111110 0 000 00 1223
Q ss_pred CCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHH----HcCCcEEEEcCCCC
Q 010820 433 KRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAK----AAGLEVVISIRPGN 482 (500)
Q Consensus 433 KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~----~aG~~~i~v~~~~~ 482 (500)
-++..++...+.+.+.. |+.++||+|+..++.+.. ..|+.++++...+.
T Consensus 161 ~~KG~~L~~fL~~~~~~-pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~~ 213 (252)
T PF11019_consen 161 QDKGEVLKYFLDKINQS-PKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTGA 213 (252)
T ss_pred CccHHHHHHHHHHcCCC-CCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcch
Confidence 55889999999999998 999999999997665544 47999998877643
|
The function is not known. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0063 Score=59.36 Aligned_cols=51 Identities=10% Similarity=-0.022 Sum_probs=42.6
Q ss_pred cccccCCCCHHHHHHHHHHcCC---CCCCcEEEEeCCHhhHHHHHHcCCcEEEEc
Q 010820 427 DTAVGNKRETPSYVEITNSLGV---DKPSEILFVTDVYQEATAAKAAGLEVVISI 478 (500)
Q Consensus 427 d~~~~~KP~p~~~~~~l~~l~v---~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~ 478 (500)
+.....-.|....+.+++.+++ + +++++.|||+.||+.+-+.+|...+.-+
T Consensus 180 Ei~~~g~sKg~al~~l~~~lgi~~~~-~~~viafGDs~NDi~Ml~~ag~gvAM~~ 233 (271)
T PRK03669 180 HVLDASAGKDQAANWLIATYQQLSGT-RPTTLGLGDGPNDAPLLDVMDYAVVVKG 233 (271)
T ss_pred EEecCCCCHHHHHHHHHHHHHhhcCC-CceEEEEcCCHHHHHHHHhCCEEEEecC
Confidence 4333445588899999999999 8 9999999999999999999998666553
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.00062 Score=77.63 Aligned_cols=118 Identities=14% Similarity=0.162 Sum_probs=81.4
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccc-----cccc-----cc---------cccccCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-----YLSG-----FF---------DTAVGNKRE 435 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~-----~f~~-----~~---------d~~~~~KP~ 435 (500)
-+++|++.++|+.|++.|+++.++|+........+.+..|+..-.. .+++ .. ......+-.
T Consensus 536 Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~ 615 (917)
T TIGR01116 536 DPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVE 615 (917)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecC
Confidence 3789999999999999999999999999999999999996532100 1111 00 011122334
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCC
Q 010820 436 TPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINS 496 (500)
Q Consensus 436 p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~ 496 (500)
|+-=.++++.++-. .+.+.|+||+.||+.+.+.+++.... .. + .+.....+|+++.+
T Consensus 616 P~~K~~iV~~lq~~-g~~va~iGDG~ND~~alk~AdVGia~-g~-g-~~~ak~aAD~vl~d 672 (917)
T TIGR01116 616 PSHKSELVELLQEQ-GEIVAMTGDGVNDAPALKKADIGIAM-GS-G-TEVAKEASDMVLAD 672 (917)
T ss_pred HHHHHHHHHHHHhc-CCeEEEecCCcchHHHHHhCCeeEEC-CC-C-cHHHHHhcCeEEcc
Confidence 45456777777765 78999999999999999999994332 21 2 22223344888876
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >COG5663 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.00081 Score=58.52 Aligned_cols=95 Identities=18% Similarity=0.192 Sum_probs=66.7
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccc-ccccccccccCCCCHHHHHHHHHHcCCCCCCcE
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY-LSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 454 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~-f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~ 454 (500)
.+-.++...|..|+++ .+++-+|.......+.....+ ..... ++..+-.....| ..+.+.++++
T Consensus 72 l~~q~v~~~L~~~~e~-~~L~~itar~~dl~~iT~~~l---~~q~ih~~~l~i~g~h~K------V~~vrth~id----- 136 (194)
T COG5663 72 LLAQLVKQVLPSLKEE-HRLIYITARKADLTRITYAWL---FIQNIHYDHLEIVGLHHK------VEAVRTHNID----- 136 (194)
T ss_pred HHHHHHHHHhHHHHhh-ceeeeeehhhHHHHHHHHHHH---HHhccchhhhhhhccccc------chhhHhhccC-----
Confidence 4557788999999886 678888987777766655444 22222 333321112222 4577888888
Q ss_pred EEEeCCH-hhHHHHHHcCCcEEEEcCCCCCCC
Q 010820 455 LFVTDVY-QEATAAKAAGLEVVISIRPGNGPL 485 (500)
Q Consensus 455 l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~ 485 (500)
+|+.|+. +-++.|+++|++.+.++.++++..
T Consensus 137 lf~ed~~~na~~iAk~~~~~vilins~ynRkp 168 (194)
T COG5663 137 LFFEDSHDNAGQIAKNAGIPVILINSPYNRKP 168 (194)
T ss_pred ccccccCchHHHHHHhcCCcEEEecCcccccc
Confidence 9999997 889999999999999999866543
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0017 Score=62.04 Aligned_cols=102 Identities=14% Similarity=0.187 Sum_probs=57.4
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHH---HHHHHHhccCcccccccccccccccccCCCCHHHHHHH-HH---Hc
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRL---AQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEI-TN---SL 446 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~---~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~-l~---~l 446 (500)
..++.|++.++++.++++|+++.++||.... ....-|++.|+.+...++-. +.....+.+.--|... .+ +-
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~~~LiLR--~~~D~~~~~av~yKs~~R~~li~e 220 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTWEKLILK--DPQDNSAENAVEYKTAARAKLIQE 220 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCcceeeec--CCCCCccchhHHHHHHHHHHHHHc
Confidence 4578999999999999999999999998853 33444555543332222111 1111112222222211 11 12
Q ss_pred CCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 447 GVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 447 ~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
|. .=+..|||..+|+.+....+-++.-+..+
T Consensus 221 GY---rIv~~iGDq~sDl~G~~~g~~RtFKLPNP 251 (275)
T TIGR01680 221 GY---NIVGIIGDQWNDLKGEHRGAIRSFKLPNP 251 (275)
T ss_pred Cc---eEEEEECCCHHhccCCCccCcceecCCCc
Confidence 22 23466899999996554223455555443
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0017 Score=57.05 Aligned_cols=91 Identities=14% Similarity=0.234 Sum_probs=57.2
Q ss_pred HHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccc-ccccc-cccccCCCCHHHHHH--HHHHcCCCCCCcEEE
Q 010820 381 VPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY-LSGFF-DTAVGNKRETPSYVE--ITNSLGVDKPSEILF 456 (500)
Q Consensus 381 v~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~-f~~~~-d~~~~~KP~p~~~~~--~l~~l~v~~p~~~l~ 456 (500)
++++++.-.++|=.++.+|+..+.-.+-+-+.+. .+| +.... -...+.||+|.-|.+ .+...++. ++
T Consensus 119 A~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~La----k~F~i~~m~pv~f~Gdk~k~~qy~Kt~~i~~~~~~-----Ih 189 (237)
T COG3700 119 ARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLA----KNFHITNMNPVIFAGDKPKPGQYTKTQWIQDKNIR-----IH 189 (237)
T ss_pred HHHHHHHHHhcCCeEEEEecCCCCcccccchhHH----hhcccCCCcceeeccCCCCcccccccHHHHhcCce-----EE
Confidence 5677777778899999999977653333222220 011 11111 001234665554433 34444444 89
Q ss_pred EeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 457 VTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 457 VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
-||+.+||.+|+.+|++.|.+.|.
T Consensus 190 YGDSD~Di~AAkeaG~RgIRilRA 213 (237)
T COG3700 190 YGDSDNDITAAKEAGARGIRILRA 213 (237)
T ss_pred ecCCchhhhHHHhcCccceeEEec
Confidence 999999999999999999999886
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0037 Score=62.26 Aligned_cols=89 Identities=17% Similarity=0.226 Sum_probs=63.6
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHH---HHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCc
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQ---RLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 453 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~---~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~ 453 (500)
++||+.++|+.|+++|++++++||++.... ...++.+ |+.-.++.++. ........+++.+.. ...
T Consensus 45 ~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~l---Gi~~~~~~I~t-------s~~~~~~~l~~~~~~-~~~ 113 (311)
T PLN02645 45 LIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESL---GLNVTEEEIFS-------SSFAAAAYLKSINFP-KDK 113 (311)
T ss_pred cCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHC---CCCCChhhEee-------hHHHHHHHHHhhccC-CCC
Confidence 789999999999999999999999884333 3344555 33322333331 223555666666664 556
Q ss_pred EEEEeCCHhhHHHHHHcCCcEEE
Q 010820 454 ILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 454 ~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
.+||+++..+.+.++.+|+.++.
T Consensus 114 ~V~viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 114 KVYVIGEEGILEELELAGFQYLG 136 (311)
T ss_pred EEEEEcCHHHHHHHHHCCCEEec
Confidence 78888899999999999998765
|
|
| >KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0099 Score=51.03 Aligned_cols=47 Identities=17% Similarity=0.011 Sum_probs=37.4
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEeCCH-hhHHHHHHcCCcEEEEcCCC
Q 010820 435 ETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAAGLEVVISIRPG 481 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~~p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~ 481 (500)
..+.+......-.+..+++++||||.+ .||..|...|-..||..++.
T Consensus 123 t~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv 170 (190)
T KOG2961|consen 123 TAEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGV 170 (190)
T ss_pred cHHHHHHHhCCcccCChhHeEEEccchhhhHhhhhhccceeEEecccc
Confidence 455555555444454489999999998 99999999999999998873
|
|
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.011 Score=60.07 Aligned_cols=90 Identities=12% Similarity=0.176 Sum_probs=70.0
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccccc---ccccccccCCCCHHHHHHHHHHcCCCCCCc
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS---GFFDTAVGNKRETPSYVEITNSLGVDKPSE 453 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~---~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~ 453 (500)
+|....+.+..|+++|+-++|+|-+....+..++.+.+ +.+- ++-.....=-|+.+-+.++++++++- .+.
T Consensus 256 ~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp-----~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg-~dS 329 (574)
T COG3882 256 AFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHP-----DMILKEEDFAVFQINWDPKAENIRKIAKKLNLG-LDS 329 (574)
T ss_pred hHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCC-----CeEeeHhhhhhheecCCcchhhHHHHHHHhCCC-ccc
Confidence 33334578999999999999999999999888886663 2211 11122344588999999999999998 999
Q ss_pred EEEEeCCHhhHHHHHHcCC
Q 010820 454 ILFVTDVYQEATAAKAAGL 472 (500)
Q Consensus 454 ~l~VGDs~~Di~aA~~aG~ 472 (500)
.+||+|++...+--++-+-
T Consensus 330 mvFiDD~p~ErE~vk~~~~ 348 (574)
T COG3882 330 MVFIDDNPAERELVKRELP 348 (574)
T ss_pred eEEecCCHHHHHHHHhcCc
Confidence 9999999988888888765
|
|
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0032 Score=55.86 Aligned_cols=78 Identities=17% Similarity=0.161 Sum_probs=57.1
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccc-cc-cccc--cccccCCCCHHHHHHHH-HHcCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YL-SGFF--DTAVGNKRETPSYVEIT-NSLGV 448 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~-~f-~~~~--d~~~~~KP~p~~~~~~l-~~l~v 448 (500)
...++||+.++|++|++. ++++|+||+.+.++..+++.+ +... +| +.++ +... .+ +.+-+ ..++.
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~l---dp~~~~F~~ri~~rd~~~--~~----~~KdL~~i~~~ 125 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLI---DPDGKYFGDRIISRDESG--SP----HTKSLLRLFPA 125 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHh---CcCCCeeccEEEEeccCC--CC----ccccHHHHcCC
Confidence 357999999999999854 999999999999999999999 5553 56 3333 2211 11 12223 33466
Q ss_pred CCCCcEEEEeCCHh
Q 010820 449 DKPSEILFVTDVYQ 462 (500)
Q Consensus 449 ~~p~~~l~VGDs~~ 462 (500)
+ .+.+++|+|++.
T Consensus 126 d-~~~vvivDd~~~ 138 (156)
T TIGR02250 126 D-ESMVVIIDDRED 138 (156)
T ss_pred C-cccEEEEeCCHH
Confidence 6 889999999984
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0058 Score=66.61 Aligned_cols=88 Identities=14% Similarity=0.229 Sum_probs=68.1
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEE
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 455 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l 455 (500)
++.|++++.+++|+++|+++.++|+........+.+.+| +.+++. +.+| +-=..+++++.-. .+.+.
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lG---I~~v~a-------~~~P--edK~~~v~~lq~~-g~~Va 512 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAG---VDDFIA-------EATP--EDKIALIRQEQAE-GKLVA 512 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC---CCEEEc-------CCCH--HHHHHHHHHHHHc-CCeEE
Confidence 788999999999999999999999999999999999994 433332 2334 2223344444333 56799
Q ss_pred EEeCCHhhHHHHHHcCCcEEE
Q 010820 456 FVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 456 ~VGDs~~Di~aA~~aG~~~i~ 476 (500)
|+||+.||..+-+.+++....
T Consensus 513 mvGDG~NDapAL~~AdvGiAm 533 (675)
T TIGR01497 513 MTGDGTNDAPALAQADVGVAM 533 (675)
T ss_pred EECCCcchHHHHHhCCEeEEe
Confidence 999999999999999887654
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0024 Score=61.81 Aligned_cols=39 Identities=10% Similarity=0.108 Sum_probs=31.9
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHH---HHHHHHhccCc
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRL---AQRLIFGNSNY 415 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~---~~~~~l~~~~~ 415 (500)
++|++.++|++|+++|++++++||++.. .....++.+|+
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~ 63 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGF 63 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCC
Confidence 7889999999999999999999997654 45566666643
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0088 Score=65.28 Aligned_cols=88 Identities=10% Similarity=0.206 Sum_probs=69.7
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEE
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 455 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l 455 (500)
++.|++++.+++||+.|+++.++|+........+-+.+| +.++|. +. .|+-=.++.+++.-. .+-+.
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elG---I~~v~A-------~~--~PedK~~iV~~lQ~~-G~~Va 507 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAG---VDRFVA-------EC--KPEDKINVIREEQAK-GHIVA 507 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC---CceEEc-------CC--CHHHHHHHHHHHHhC-CCEEE
Confidence 788999999999999999999999999999999999994 443332 12 344445566666554 66789
Q ss_pred EEeCCHhhHHHHHHcCCcEEE
Q 010820 456 FVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 456 ~VGDs~~Di~aA~~aG~~~i~ 476 (500)
|+||+.||..+-+++.+....
T Consensus 508 MtGDGvNDAPALa~ADVGIAM 528 (673)
T PRK14010 508 MTGDGTNDAPALAEANVGLAM 528 (673)
T ss_pred EECCChhhHHHHHhCCEEEEe
Confidence 999999999999999875433
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0087 Score=65.54 Aligned_cols=87 Identities=22% Similarity=0.254 Sum_probs=66.9
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEE
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 455 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l 455 (500)
++.|++.+++++|+++|+++.++|+.++...+.+-+.+ |+.+++.. .+| +=-....+++.-. .+.++
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~l---GId~v~Ae-------llP--edK~~~V~~l~~~-g~~Va 603 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKEL---GIDEVRAE-------LLP--EDKAEIVRELQAE-GRKVA 603 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc---ChHhhecc-------CCc--HHHHHHHHHHHhc-CCEEE
Confidence 78899999999999999999999999999999999999 44444322 233 2223455555544 67899
Q ss_pred EEeCCHhhHHHHHHcCCcEE
Q 010820 456 FVTDVYQEATAAKAAGLEVV 475 (500)
Q Consensus 456 ~VGDs~~Di~aA~~aG~~~i 475 (500)
||||..||--+-..+.+...
T Consensus 604 mVGDGINDAPALA~AdVGiA 623 (713)
T COG2217 604 MVGDGINDAPALAAADVGIA 623 (713)
T ss_pred EEeCCchhHHHHhhcCeeEe
Confidence 99999999988887765443
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.01 Score=64.88 Aligned_cols=89 Identities=13% Similarity=0.204 Sum_probs=69.3
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEE
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 455 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l 455 (500)
++.||+++.+++|++.|+++.++|+........+-+..| +.++|. +. .|+-=.++.++++-. .+-+.
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elG---Id~v~A-------~~--~PedK~~iV~~lQ~~-G~~Va 511 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAG---VDDFLA-------EA--TPEDKLALIRQEQAE-GRLVA 511 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC---CcEEEc-------cC--CHHHHHHHHHHHHHc-CCeEE
Confidence 678999999999999999999999999999999999994 433321 12 344444555565554 56789
Q ss_pred EEeCCHhhHHHHHHcCCcEEEE
Q 010820 456 FVTDVYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 456 ~VGDs~~Di~aA~~aG~~~i~v 477 (500)
|+||+.||..+-+++.+....-
T Consensus 512 MtGDGvNDAPALa~ADVGIAMg 533 (679)
T PRK01122 512 MTGDGTNDAPALAQADVGVAMN 533 (679)
T ss_pred EECCCcchHHHHHhCCEeEEeC
Confidence 9999999999999998755443
|
|
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0082 Score=55.75 Aligned_cols=85 Identities=14% Similarity=0.129 Sum_probs=58.2
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHH-H---HHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLA-Q---RLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVD 449 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~-~---~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~ 449 (500)
++.+.||+.++|+..-++|..+.-+||..++. . ..-|++. |+.......+-.....|++..-++.+-+ .
T Consensus 120 ~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~---g~~~~~~~~~llkk~~k~Ke~R~~~v~k----~ 192 (274)
T COG2503 120 KSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSE---GLPQVLESHLLLKKDKKSKEVRRQAVEK----D 192 (274)
T ss_pred ccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHc---CcccccccceEEeeCCCcHHHHHHHHhh----c
Confidence 45699999999999999999999999988776 2 3335555 3444432222112335677766666655 2
Q ss_pred CCCcEEEEeCCHhhHHH
Q 010820 450 KPSEILFVTDVYQEATA 466 (500)
Q Consensus 450 ~p~~~l~VGDs~~Di~a 466 (500)
-+-+++|||+..|...
T Consensus 193 -~~iVm~vGDNl~DF~d 208 (274)
T COG2503 193 -YKIVMLVGDNLDDFGD 208 (274)
T ss_pred -cceeeEecCchhhhcc
Confidence 4467899999977643
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.011 Score=55.70 Aligned_cols=40 Identities=13% Similarity=0.014 Sum_probs=36.6
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 010820 435 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 475 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i 475 (500)
++.....++++++++ ++++++|||+.||+.+.+.+|...+
T Consensus 180 Kg~al~~l~~~lgi~-~~~vi~~GD~~NDi~ml~~ag~~va 219 (221)
T TIGR02463 180 KGKAANWLKATYNQP-DVKTLGLGDGPNDLPLLEVADYAVV 219 (221)
T ss_pred HHHHHHHHHHHhCCC-CCcEEEECCCHHHHHHHHhCCceEE
Confidence 566789999999998 9999999999999999999998765
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.027 Score=49.61 Aligned_cols=100 Identities=12% Similarity=0.131 Sum_probs=57.8
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHH---HHHhccCcccccccccc--------cc----cccccCCC---CHHH
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQR---LIFGNSNYGDLRKYLSG--------FF----DTAVGNKR---ETPS 438 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~---~~l~~~~~~~l~~~f~~--------~~----d~~~~~KP---~p~~ 438 (500)
..+|+.++.+.+.++||++.-+|+.+..... ..|+...-++ ..+-.+ .+ .+....+| |..+
T Consensus 28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~-~~lP~Gpv~~sP~~l~~al~rEvi~~~p~~fK~~~ 106 (157)
T PF08235_consen 28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQG-HNLPDGPVLLSPDSLFSALHREVISKDPEEFKIAC 106 (157)
T ss_pred hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCC-ccCCCCCEEECCcchhhhhhccccccChHHHHHHH
Confidence 6689999999999999999999998854443 3343330000 011111 11 12222333 2333
Q ss_pred HHHHHHHcCCCCCCcE--EEEeCCHhhHHHHHHcCCcE--EEEcC
Q 010820 439 YVEITNSLGVDKPSEI--LFVTDVYQEATAAKAAGLEV--VISIR 479 (500)
Q Consensus 439 ~~~~l~~l~v~~p~~~--l~VGDs~~Di~aA~~aG~~~--i~v~~ 479 (500)
+..+...+.-. ..- .-+|++.+|+.+=+++|+.. |++..
T Consensus 107 L~~l~~~f~~~--~~pf~agfGN~~tDv~aY~~vGip~~rIF~I~ 149 (157)
T PF08235_consen 107 LRDLRALFPPD--GNPFYAGFGNRSTDVIAYKAVGIPKSRIFIIN 149 (157)
T ss_pred HHHHHHhcCCC--CCeEEEecCCcHHHHHHHHHcCCChhhEEEEC
Confidence 33333333311 222 33689999999999999987 55433
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0068 Score=58.27 Aligned_cols=16 Identities=25% Similarity=0.505 Sum_probs=14.5
Q ss_pred CCCceEEEEecCCccc
Q 010820 281 GLFPRCIVLDIEGTTT 296 (500)
Q Consensus 281 ~~~~k~vlFD~DGTL~ 296 (500)
-|++|.|+||+||||+
T Consensus 2 ~~~~klia~DlDGTLL 17 (247)
T PTZ00174 2 EMKKTILLFDVDGTLT 17 (247)
T ss_pred CCCCeEEEEECcCCCc
Confidence 3668999999999999
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.0075 Score=58.55 Aligned_cols=43 Identities=14% Similarity=0.185 Sum_probs=33.9
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcC
Q 010820 436 TPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIR 479 (500)
Q Consensus 436 p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~ 479 (500)
...++.+++.+|++ +++++.|||+.||+++.+.+|...+.-+.
T Consensus 192 g~al~~l~~~lgi~-~~~viafGD~~NDi~Ml~~ag~~vAm~NA 234 (266)
T PRK10976 192 GHALEAVAKKLGYS-LKDCIAFGDGMNDAEMLSMAGKGCIMGNA 234 (266)
T ss_pred HHHHHHHHHHcCCC-HHHeEEEcCCcccHHHHHHcCCCeeecCC
Confidence 33556667777887 89999999999999999999987665543
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.0083 Score=58.19 Aligned_cols=34 Identities=15% Similarity=0.153 Sum_probs=29.3
Q ss_pred HHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccC
Q 010820 381 VPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN 414 (500)
Q Consensus 381 v~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~ 414 (500)
+.++|++|+++|++++++|+.....+..+.+.++
T Consensus 23 a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lg 56 (302)
T PRK12702 23 ARQALAALERRSIPLVLYSLRTRAQLEHLCRQLR 56 (302)
T ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhC
Confidence 4578899999999999999999888888888885
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.13 Score=55.82 Aligned_cols=46 Identities=4% Similarity=0.052 Sum_probs=39.9
Q ss_pred CCCCHHHHHHHHHHcCCCCCCcEEEE--eCCHhhHHHHHHcCCcEEEEc
Q 010820 432 NKRETPSYVEITNSLGVDKPSEILFV--TDVYQEATAAKAAGLEVVISI 478 (500)
Q Consensus 432 ~KP~p~~~~~~l~~l~v~~p~~~l~V--GDs~~Di~aA~~aG~~~i~v~ 478 (500)
.-.|....+.+++.++++ .++++.| ||+.||+.+-+.+|...+.-.
T Consensus 611 gvdKG~AL~~L~e~~gI~-~~eViafalGDs~NDisMLe~Ag~gVAM~~ 658 (694)
T PRK14502 611 GNDKGKAIKILNELFRLN-FGNIHTFGLGDSENDYSMLETVDSPILVQR 658 (694)
T ss_pred CCCHHHHHHHHHHHhCCC-ccceEEEEcCCcHhhHHHHHhCCceEEEcC
Confidence 456888999999999998 8888888 999999999999999766543
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.022 Score=48.41 Aligned_cols=31 Identities=26% Similarity=0.250 Sum_probs=26.0
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHH
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQR 407 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~ 407 (500)
+.+++.+.|++|+++|+.++++|+.+.....
T Consensus 25 ~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 25 PILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 6667889999999999999999998765544
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.016 Score=55.25 Aligned_cols=27 Identities=22% Similarity=0.319 Sum_probs=24.5
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcH
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSR 403 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~ 403 (500)
++|++.+.|+.|+++|+++.++||+..
T Consensus 15 ~~~~a~e~i~~l~~~g~~~~~~tN~~~ 41 (236)
T TIGR01460 15 PIPGAAEALNRLRAKGKPVVFLTNNSS 41 (236)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCC
Confidence 678999999999999999999998773
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >TIGR01658 EYA-cons_domain eyes absent protein conserved domain | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.12 Score=48.44 Aligned_cols=44 Identities=20% Similarity=0.170 Sum_probs=39.6
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcC
Q 010820 435 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIR 479 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~ 479 (500)
+..+|++|.+++|-+ .-..++|||+..--.+|+..+|+++-|..
T Consensus 215 K~~cFe~I~~Rfg~p-~~~f~~IGDG~eEe~aAk~l~wPFw~I~~ 258 (274)
T TIGR01658 215 KLQCFKWIKERFGHP-KVRFCAIGDGWEECTAAQAMNWPFVKIDL 258 (274)
T ss_pred hHHHHHHHHHHhCCC-CceEEEeCCChhHHHHHHhcCCCeEEeec
Confidence 678999999999985 66778899999999999999999999875
|
This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.013 Score=56.36 Aligned_cols=45 Identities=13% Similarity=0.189 Sum_probs=36.4
Q ss_pred CCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 434 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 434 P~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
-|......++++++++ +++++.+|||.||+.+- ..+...|.|...
T Consensus 165 ~K~~Al~~L~~~~~~~-~~~vl~aGDSgND~~mL-~~~~~~vvV~Na 209 (247)
T PF05116_consen 165 SKGAALRYLMERWGIP-PEQVLVAGDSGNDLEML-EGGDHGVVVGNA 209 (247)
T ss_dssp SHHHHHHHHHHHHT---GGGEEEEESSGGGHHHH-CCSSEEEE-TTS
T ss_pred CHHHHHHHHHHHhCCC-HHHEEEEeCCCCcHHHH-cCcCCEEEEcCC
Confidence 3778899999999998 99999999999999877 777788888653
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.018 Score=64.40 Aligned_cols=100 Identities=17% Similarity=0.111 Sum_probs=71.9
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccc----ccc-------------ccccc-cccccCCCCHH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDL----RKY-------------LSGFF-DTAVGNKRETP 437 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l----~~~-------------f~~~~-d~~~~~KP~p~ 437 (500)
++.|++.+++++|++.|+++.++|+........+.+.+|+.+- ..+ ++... +.....+-.|+
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe 521 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPE 521 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHH
Confidence 7889999999999999999999999999999999999965320 000 00111 00012233455
Q ss_pred HHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 010820 438 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 438 ~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
-=.++.+.+.-. .+.+.|+||+.||..+-+.+.+....
T Consensus 522 ~K~~iV~~lq~~-G~~VamvGDGvNDapAL~~AdVGIAm 559 (755)
T TIGR01647 522 HKYEIVEILQKR-GHLVGMTGDGVNDAPALKKADVGIAV 559 (755)
T ss_pred HHHHHHHHHHhc-CCEEEEEcCCcccHHHHHhCCeeEEe
Confidence 555566666655 67899999999999999999877543
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.011 Score=57.51 Aligned_cols=102 Identities=11% Similarity=0.056 Sum_probs=73.1
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccc-------cccCCC--------CH-----
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT-------AVGNKR--------ET----- 436 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~-------~~~~KP--------~p----- 436 (500)
-.|....+|+.|+++|-++.++||++...+..-+..+-..++.++||-++-. ....+| ..
T Consensus 241 r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdk 320 (510)
T KOG2470|consen 241 RNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDK 320 (510)
T ss_pred ccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhh
Confidence 3456778999999999999999999999998887777656777777766510 011122 00
Q ss_pred ------------HHHHHHHHHcCCCCCCcEEEEeCCH-hhHHHHH-HcCCcEEEEcC
Q 010820 437 ------------PSYVEITNSLGVDKPSEILFVTDVY-QEATAAK-AAGLEVVISIR 479 (500)
Q Consensus 437 ------------~~~~~~l~~l~v~~p~~~l~VGDs~-~Di~aA~-~aG~~~i~v~~ 479 (500)
-.....++.-+.. ..+++|+||+. +|+..-. +.||.+-.+..
T Consensus 321 v~klekgkiYy~G~l~~flelt~Wr-G~~VlYFGDHlySDLad~tlkhgWRTgAII~ 376 (510)
T KOG2470|consen 321 VDKLEKGKIYYQGNLKSFLELTGWR-GPRVLYFGDHLYSDLADLTLKHGWRTGAIIP 376 (510)
T ss_pred hhhcccCceeeeccHHHHHHHhccC-CCeeEEecCcchhhhhhhHhhcccccccchH
Confidence 1223445555666 78999999998 8887766 89999976654
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.079 Score=54.89 Aligned_cols=47 Identities=15% Similarity=0.144 Sum_probs=39.6
Q ss_pred CCCCHHHHHHHHHHc---CCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcC
Q 010820 432 NKRETPSYVEITNSL---GVDKPSEILFVTDVYQEATAAKAAGLEVVISIR 479 (500)
Q Consensus 432 ~KP~p~~~~~~l~~l---~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~ 479 (500)
.--|...+..+++++ +++ +++++.+||+.||+++-+.+|...|.+..
T Consensus 173 g~sKg~Al~~L~~~~~~~gi~-~~~~iafGDs~NDleMl~~ag~~gvam~N 222 (413)
T PLN02382 173 GAGKGQALAYLLKKLKAEGKA-PVNTLVCGDSGNDAELFSVPDVYGVMVSN 222 (413)
T ss_pred CCCHHHHHHHHHHHhhhcCCC-hhcEEEEeCCHHHHHHHhcCCCCEEEEcC
Confidence 344788999999999 897 99999999999999999999965555543
|
|
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.032 Score=53.76 Aligned_cols=96 Identities=11% Similarity=0.031 Sum_probs=54.5
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEEE
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILF 456 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~ 456 (500)
+.||+.++|+.|+..|-.+.++||++...-+...+++.-.|+. .+-+..+ .-|.-.+... +++.... .+.++.
T Consensus 39 ~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~----~v~e~~i-~ssa~~~a~y-lk~~~~~-~k~Vyv 111 (306)
T KOG2882|consen 39 PIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN----SVKEENI-FSSAYAIADY-LKKRKPF-GKKVYV 111 (306)
T ss_pred CCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc----ccCcccc-cChHHHHHHH-HHHhCcC-CCeEEE
Confidence 8899999999999999999999999876666555444111222 1111111 1222222222 2222222 567777
Q ss_pred EeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 457 VTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 457 VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
+|-..- -+..+++|+....-...
T Consensus 112 ig~~gi-~~eL~~aG~~~~g~~~~ 134 (306)
T KOG2882|consen 112 IGEEGI-REELDEAGFEYFGGGPD 134 (306)
T ss_pred ecchhh-hHHHHHcCceeecCCCC
Confidence 774431 12356677666655444
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.037 Score=59.55 Aligned_cols=36 Identities=33% Similarity=0.456 Sum_probs=29.5
Q ss_pred HHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEc
Q 010820 442 ITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISI 478 (500)
Q Consensus 442 ~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~ 478 (500)
+++.+|++ +++++.|||+.||+++-+.+|...+.-|
T Consensus 515 L~e~lGI~-~eeviAFGDs~NDIeMLe~AG~gVAMgN 550 (580)
T PLN02887 515 LLNHLGVS-PDEIMAIGDGENDIEMLQLASLGVALSN 550 (580)
T ss_pred HHHHcCCC-HHHEEEEecchhhHHHHHHCCCEEEeCC
Confidence 44566787 8899999999999999999998655544
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.028 Score=64.06 Aligned_cols=99 Identities=17% Similarity=0.163 Sum_probs=72.4
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccccc-------------ccc-cccccCCCCHHHHHH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS-------------GFF-DTAVGNKRETPSYVE 441 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~-------------~~~-d~~~~~KP~p~~~~~ 441 (500)
++.|++.+++++|++.|+++.++|+........+.+.+|+.+ ...+. ... +.....+-.|+-=.+
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~-~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~ 628 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA-GEVLIGSDIETLSDDELANLAERTTLFARLTPMHKER 628 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc-cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHH
Confidence 788999999999999999999999999999999999996531 00010 011 001122335555566
Q ss_pred HHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 010820 442 ITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 442 ~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
+.+.+.-. .+-+.|+||+.||..+-+++.+....
T Consensus 629 IV~~Lq~~-G~vVam~GDGvNDaPALk~ADVGIAm 662 (902)
T PRK10517 629 IVTLLKRE-GHVVGFMGDGINDAPALRAADIGISV 662 (902)
T ss_pred HHHHHHHC-CCEEEEECCCcchHHHHHhCCEEEEe
Confidence 66666655 67899999999999999999876544
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.023 Score=53.76 Aligned_cols=35 Identities=29% Similarity=0.281 Sum_probs=28.3
Q ss_pred CHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccC
Q 010820 380 DVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN 414 (500)
Q Consensus 380 gv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~ 414 (500)
.+.++|++|+++|++++++|+.+...+...++.++
T Consensus 19 ~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg 53 (225)
T TIGR02461 19 PAREALEELKDLGFPIVFVSSKTRAEQEYYREELG 53 (225)
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcC
Confidence 35678888888899999999888888777777774
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.032 Score=63.44 Aligned_cols=100 Identities=13% Similarity=0.140 Sum_probs=71.2
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccccc-------------ccccc-cccCCCCHHHHHH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS-------------GFFDT-AVGNKRETPSYVE 441 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~-------------~~~d~-~~~~KP~p~~~~~ 441 (500)
++.|++++++++|++.|+++.++|+........+-+.+|+.+ .+.+. ...+. .....-.|+-=.+
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~-~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~ 593 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA-NDFLLGADIEELSDEELARELRKYHIFARLTPMQKSR 593 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC-CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHH
Confidence 788999999999999999999999999999999999996531 00110 00000 1112224444455
Q ss_pred HHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEE
Q 010820 442 ITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 442 ~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v 477 (500)
+.+.+.-. .+.+.|+||+.||..+-+.+.+....-
T Consensus 594 iV~~lq~~-G~vVam~GDGvNDapALk~AdVGIAmg 628 (867)
T TIGR01524 594 IIGLLKKA-GHTVGFLGDGINDAPALRKADVGISVD 628 (867)
T ss_pred HHHHHHhC-CCEEEEECCCcccHHHHHhCCEEEEeC
Confidence 55555544 568999999999999999998876543
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.08 Score=50.69 Aligned_cols=82 Identities=18% Similarity=0.145 Sum_probs=59.6
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccccccccccc---c----------------cCCC---
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTA---V----------------GNKR--- 434 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~---~----------------~~KP--- 434 (500)
..|.+.+.|.+|+++|..+++=|.|.++++...++++ ++.++|+.++... + ..||
T Consensus 143 r~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~---~L~~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~Fyl 219 (297)
T PF05152_consen 143 RDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKEL---KLEGYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYL 219 (297)
T ss_pred CChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHh---CCccccEEEEeCCccCCcCCccceeecccceEEeccceEE
Confidence 3456778899999999989999999999999999999 5667777666110 0 0011
Q ss_pred ----------CHHHHHHHHHHcCCCCCCcEEEEeCCH
Q 010820 435 ----------ETPSYVEITNSLGVDKPSEILFVTDVY 461 (500)
Q Consensus 435 ----------~p~~~~~~l~~l~v~~p~~~l~VGDs~ 461 (500)
.|.+....+++.|+.--+.+-.|+|-.
T Consensus 220 Dv~~~~~LPKSPrVVL~yL~k~gvny~KtiTLVDDL~ 256 (297)
T PF05152_consen 220 DVTNVNNLPKSPRVVLWYLRKKGVNYFKTITLVDDLK 256 (297)
T ss_pred eCCcCCCCCCCCeehHHHHHHcCCceeeeEEEeccCc
Confidence 567777888888886456667788766
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.069 Score=53.45 Aligned_cols=85 Identities=15% Similarity=0.149 Sum_probs=52.0
Q ss_pred cCCCHHHHHHHHHhC----CcEEEEEcCCc---HHH-HHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCC
Q 010820 377 VFDDVPEALEKWHSL----GTKVYIYSSGS---RLA-QRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGV 448 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~----G~~l~v~Tn~~---~~~-~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v 448 (500)
++|++.++|+.|+.+ |.++.++||+. ... ...+.+++|+ .--.+.++.. .. .....++++
T Consensus 17 ~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~---~~~~~~i~~s------~~-~~~~ll~~~-- 84 (321)
T TIGR01456 17 PIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGV---DVSPLQVIQS------HS-PYKSLVNKY-- 84 (321)
T ss_pred ccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCC---CCCHHHHHhh------hH-HHHHHHHHc--
Confidence 577888999999998 99999999986 333 4444466642 1112222211 11 234444443
Q ss_pred CCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 010820 449 DKPSEILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 449 ~~p~~~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
. ..+++||-+. -.+.++..|+..+.
T Consensus 85 ~--~~v~viG~~~-~~~~l~~~G~~~vv 109 (321)
T TIGR01456 85 E--KRILAVGTGS-VRGVAEGYGFQNVV 109 (321)
T ss_pred C--CceEEEeChH-HHHHHHHcCCcccc
Confidence 2 2678888654 46666788987654
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.028 Score=54.20 Aligned_cols=40 Identities=18% Similarity=0.360 Sum_probs=30.4
Q ss_pred HHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEE
Q 010820 437 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 437 ~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v 477 (500)
..++.+++.++++ ++++++|||+.||+.+.+.+|+..+..
T Consensus 191 ~~i~~~~~~~~~~-~~~~~~~GD~~nD~~m~~~~~~~~a~~ 230 (256)
T TIGR00099 191 SALQSLAEALGIS-LEDVIAFGDGMNDIEMLEAAGYGVAMG 230 (256)
T ss_pred HHHHHHHHHcCCC-HHHEEEeCCcHHhHHHHHhCCceeEec
Confidence 3555566666666 788999999999999999999865553
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.023 Score=54.48 Aligned_cols=60 Identities=7% Similarity=-0.062 Sum_probs=47.7
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHc-------CCcEEEEcCCCCCCCCCCCCceeeCCccC
Q 010820 435 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAA-------GLEVVISIRPGNGPLPENHGFKTINSFAE 499 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~a-------G~~~i~v~~~~~~~~~~~~~~~~i~~l~e 499 (500)
|...+..++++++.. +++++||||+.+|+.+++.+ |..++.+..+.. ...+++++++..+
T Consensus 168 Kg~a~~~~~~~~~~~-~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~~----~~~A~~~~~~~~~ 234 (244)
T TIGR00685 168 KGEIVKRLLWHQPGS-GISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGSK----KTVAKFHLTGPQQ 234 (244)
T ss_pred HHHHHHHHHHhcccC-CCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCCc----CCCceEeCCCHHH
Confidence 468999999999998 99999999999999999998 777777764321 2224778877654
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.025 Score=52.44 Aligned_cols=48 Identities=19% Similarity=0.200 Sum_probs=42.4
Q ss_pred cccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 010820 427 DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 475 (500)
Q Consensus 427 d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i 475 (500)
+......+|+..++.++++++++ ++++++|||+.+|+.+++.+|+..+
T Consensus 156 ev~p~~~~K~~~~~~~~~~~~~~-~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 156 EVLPAGVDKGSALQALLKELNGK-RDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred EEecCCCChHHHHHHHHHHhCCC-HHHEEEEcCCHHHHHHHHHcCCceE
Confidence 44455678999999999999998 9999999999999999999998754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.048 Score=62.69 Aligned_cols=101 Identities=14% Similarity=0.060 Sum_probs=70.7
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccc------cc--------cccc-ccccCCCCHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY------LS--------GFFD-TAVGNKRETPSY 439 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~------f~--------~~~d-~~~~~KP~p~~~ 439 (500)
-++.|++.++++.|++.|+++.++|+........+-+..|+..-... |+ ...+ ......-.|+-=
T Consensus 578 Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K 657 (941)
T TIGR01517 578 DPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDK 657 (941)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHH
Confidence 37889999999999999999999999999999999999965310000 11 0110 011122244444
Q ss_pred HHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 010820 440 VEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 440 ~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
.++.+.+.-. .+-+.|+||+.||..+-++|.+....
T Consensus 658 ~~iV~~lq~~-g~vVam~GDGvNDapALk~AdVGIAm 693 (941)
T TIGR01517 658 QLLVLMLKDM-GEVVAVTGDGTNDAPALKLADVGFSM 693 (941)
T ss_pred HHHHHHHHHC-CCEEEEECCCCchHHHHHhCCcceec
Confidence 5555555544 56799999999999999998776543
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.052 Score=61.91 Aligned_cols=98 Identities=12% Similarity=0.121 Sum_probs=71.7
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccc-----cc--------ccc-cccccCCCCHHHHHH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY-----LS--------GFF-DTAVGNKRETPSYVE 441 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~-----f~--------~~~-d~~~~~KP~p~~~~~ 441 (500)
++.|++.+++++|++.|+++.++|+........+-+.+|+.+ ... ++ ... +......-.|+-=.+
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~-~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~ 628 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP-GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSR 628 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC-CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHH
Confidence 788999999999999999999999999999999999996531 000 11 000 001122335555566
Q ss_pred HHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 010820 442 ITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 475 (500)
Q Consensus 442 ~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i 475 (500)
+.+.+.-. .+-+.|+||+.||..+-+.+.+...
T Consensus 629 iV~~Lq~~-G~vVamtGDGvNDaPALk~ADVGIA 661 (903)
T PRK15122 629 VLKALQAN-GHTVGFLGDGINDAPALRDADVGIS 661 (903)
T ss_pred HHHHHHhC-CCEEEEECCCchhHHHHHhCCEEEE
Confidence 66666655 6789999999999999999987644
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.34 Score=44.73 Aligned_cols=41 Identities=7% Similarity=-0.027 Sum_probs=34.3
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCc
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNY 415 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~ 415 (500)
..++.||+.++++.|.+. ++-+|+|.+...+.++..+..|+
T Consensus 81 sa~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~ 121 (315)
T COG4030 81 SAKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGV 121 (315)
T ss_pred hcccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCC
Confidence 367999999999999765 77888888899999988877754
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.038 Score=52.51 Aligned_cols=42 Identities=19% Similarity=0.338 Sum_probs=36.4
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEE
Q 010820 435 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v 477 (500)
|....+.+++.++++ +++++.|||+.||+.+.+.+|...+.-
T Consensus 187 K~~ai~~l~~~~~i~-~~~~~~~GD~~ND~~Ml~~~~~~~am~ 228 (254)
T PF08282_consen 187 KGSAIKYLLEYLGIS-PEDIIAFGDSENDIEMLELAGYSVAMG 228 (254)
T ss_dssp HHHHHHHHHHHHTTS-GGGEEEEESSGGGHHHHHHSSEEEEET
T ss_pred HHHHHHHHhhhcccc-cceeEEeecccccHhHHhhcCeEEEEc
Confidence 455888899999998 999999999999999999998875544
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.044 Score=51.55 Aligned_cols=34 Identities=12% Similarity=0.111 Sum_probs=30.3
Q ss_pred HHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccC
Q 010820 381 VPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN 414 (500)
Q Consensus 381 v~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~ 414 (500)
..++|+.|+++|++++++||++...+...++.++
T Consensus 21 ~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~ 54 (221)
T TIGR02463 21 AAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALG 54 (221)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcC
Confidence 4578999999999999999999999999998884
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.25 Score=45.44 Aligned_cols=37 Identities=14% Similarity=0.003 Sum_probs=33.7
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccC
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN 414 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~ 414 (500)
..|++.++|+.+.+ .|.++|-|.+...++..+++.++
T Consensus 46 kRP~l~eFL~~~~~-~feIvVwTAa~~~ya~~~l~~l~ 82 (195)
T TIGR02245 46 MRPYLHEFLTSAYE-DYDIVIWSATSMKWIEIKMTELG 82 (195)
T ss_pred eCCCHHHHHHHHHh-CCEEEEEecCCHHHHHHHHHHhc
Confidence 66999999999988 69999999999999999998774
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.09 Score=60.92 Aligned_cols=100 Identities=15% Similarity=0.143 Sum_probs=71.2
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccc----------c-cccc-----ccc---------cc
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR----------K-YLSG-----FFD---------TA 429 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~----------~-~f~~-----~~d---------~~ 429 (500)
-++.|++.++++.|++.|+++.++|+........+.+..|+.+-. . .+++ ..+ ..
T Consensus 645 Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~ 724 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCL 724 (1053)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCe
Confidence 378999999999999999999999999999999999999653110 0 0000 000 00
Q ss_pred ccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 010820 430 VGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 475 (500)
Q Consensus 430 ~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i 475 (500)
....-.|+-=.++.+.+.-. .+.+.|+||+.||..+-+.+.+...
T Consensus 725 V~ar~sP~~K~~iV~~lq~~-g~~Vam~GDGvNDapaLk~AdVGIA 769 (1053)
T TIGR01523 725 VIARCAPQTKVKMIEALHRR-KAFCAMTGDGVNDSPSLKMANVGIA 769 (1053)
T ss_pred EEEecCHHHHHHHHHHHHhc-CCeeEEeCCCcchHHHHHhCCccEe
Confidence 11223455445566666544 5678999999999999999987665
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.081 Score=51.11 Aligned_cols=105 Identities=16% Similarity=0.184 Sum_probs=62.0
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCc-ccccccccccccc-------cccCCC-------CHHHHH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNY-GDLRKYLSGFFDT-------AVGNKR-------ETPSYV 440 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~-~~l~~~f~~~~d~-------~~~~KP-------~p~~~~ 440 (500)
.++||+.++|+.|+++|.++.++||++...-+...+++.- ++...-.+.++.+ ....+| -.+.+.
T Consensus 24 ~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~~at~~~l~~~~~~~kv~viG~~~l~ 103 (269)
T COG0647 24 EAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSGDATADYLAKQKPGKKVYVIGEEGLK 103 (269)
T ss_pred ccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHHHHHHHHHHhhCCCCEEEEECCcchH
Confidence 3999999999999999999999999886554433333311 1332334444411 112222 345666
Q ss_pred HHHHHcCCC----CCC---cEEEEeCCH----hh---HHHHHHcCCcEEEEcCC
Q 010820 441 EITNSLGVD----KPS---EILFVTDVY----QE---ATAAKAAGLEVVISIRP 480 (500)
Q Consensus 441 ~~l~~l~v~----~p~---~~l~VGDs~----~D---i~aA~~aG~~~i~v~~~ 480 (500)
..++.+|+. +.. .++.+|... .+ ..-+.+.|+.+|.-|.+
T Consensus 104 ~~l~~~G~~~~~~~~~~~~d~Vv~g~d~~~~~e~l~~a~~~i~~g~~fI~tNpD 157 (269)
T COG0647 104 EELEGAGFELVDEEEPARVDAVVVGLDRTLTYEKLAEALLAIAAGAPFIATNPD 157 (269)
T ss_pred HHHHhCCcEEeccCCCCcccEEEEecCCCCCHHHHHHHHHHHHcCCcEEEeCCC
Confidence 777777752 012 467777443 23 23344467777777755
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.21 Score=52.76 Aligned_cols=88 Identities=11% Similarity=0.078 Sum_probs=50.7
Q ss_pred HHHHHHhCCcEEEEEcCCcHHHHHHHHhc-cCccccccc-----ccccccccccCC-C--CHHHHHHHHHHcCCCCCCcE
Q 010820 384 ALEKWHSLGTKVYIYSSGSRLAQRLIFGN-SNYGDLRKY-----LSGFFDTAVGNK-R--ETPSYVEITNSLGVDKPSEI 454 (500)
Q Consensus 384 ~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~-~~~~~l~~~-----f~~~~d~~~~~K-P--~p~~~~~~l~~l~v~~p~~~ 454 (500)
.++.++++|.. +|+|...+...+.+.+. +|+..+-.- .++.+....... + ...-..++.+.++.+ ...
T Consensus 115 a~~~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~g~~-~~~- 191 (497)
T PLN02177 115 TWRVFNSFGKR-YIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKKPGVLVGDHKRDAVLKEFGDA-LPD- 191 (497)
T ss_pred HHHHHHhCCCE-EEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecCCCCCccHHHHHHHHHHhCCC-Cce-
Confidence 44455677864 99999999999999965 654322110 133331111111 1 111223333556643 333
Q ss_pred EEEeCCHhhHHHHHHcCCcE
Q 010820 455 LFVTDVYQEATAAKAAGLEV 474 (500)
Q Consensus 455 l~VGDs~~Di~aA~~aG~~~ 474 (500)
+..||+.+|...-..++-..
T Consensus 192 ~aYgDS~sD~plL~~a~e~y 211 (497)
T PLN02177 192 LGLGDRETDHDFMSICKEGY 211 (497)
T ss_pred EEEECCccHHHHHHhCCccE
Confidence 88999999999888877543
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.49 E-value=0.13 Score=56.69 Aligned_cols=87 Identities=20% Similarity=0.256 Sum_probs=65.3
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCC--CHHHHHHHHHHcCCCCCCc
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKR--ETPSYVEITNSLGVDKPSE 453 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP--~p~~~~~~l~~l~v~~p~~ 453 (500)
++.|++..++..||+.|++++++|+.+....+..-+.. | ++.++.. -+| +.+.++++. -. ...
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~V---G----i~~V~ae---v~P~~K~~~Ik~lq----~~-~~~ 787 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQV---G----IDNVYAE---VLPEQKAEKIKEIQ----KN-GGP 787 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhh---C----cceEEec---cCchhhHHHHHHHH----hc-CCc
Confidence 67899999999999999999999999999999999888 3 3444411 355 444544443 33 567
Q ss_pred EEEEeCCHhhHHHHHHcCCcEEEE
Q 010820 454 ILFVTDVYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 454 ~l~VGDs~~Di~aA~~aG~~~i~v 477 (500)
+.||||+.||--+-..+.+.....
T Consensus 788 VaMVGDGINDaPALA~AdVGIaig 811 (951)
T KOG0207|consen 788 VAMVGDGINDAPALAQADVGIAIG 811 (951)
T ss_pred EEEEeCCCCccHHHHhhccceeec
Confidence 899999999987777666544433
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.42 E-value=0.11 Score=59.57 Aligned_cols=103 Identities=19% Similarity=0.188 Sum_probs=76.3
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccc---ccccc-----cc---------ccccCCCCHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK---YLSGF-----FD---------TAVGNKRETP 437 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~---~f~~~-----~d---------~~~~~KP~p~ 437 (500)
-+|.++++++++.|++.|+++.++|+........+-+..|+..-.. .+++. .+ ....++-.|+
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~ 625 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPE 625 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHH
Confidence 4899999999999999999999999999999999999997432211 11111 11 0122233566
Q ss_pred HHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEc
Q 010820 438 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISI 478 (500)
Q Consensus 438 ~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~ 478 (500)
-=.++.+.+.-. .+-+.|.||+.||+-+-+.|.+......
T Consensus 626 qK~~IV~~lq~~-g~vVamtGDGvNDapALk~ADVGIamg~ 665 (917)
T COG0474 626 QKARIVEALQKS-GHVVAMTGDGVNDAPALKAADVGIAMGG 665 (917)
T ss_pred HHHHHHHHHHhC-CCEEEEeCCCchhHHHHHhcCccEEecc
Confidence 666666666665 6789999999999999999988775554
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=94.21 E-value=0.19 Score=53.53 Aligned_cols=82 Identities=17% Similarity=0.253 Sum_probs=64.9
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEE
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 455 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l 455 (500)
++.|++.++++.|++.|+++.++|+........+-+.+| + + ..-.|+--..+.+++.-. ...+.
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lg---i-------~-----~~~~p~~K~~~v~~l~~~-g~~v~ 410 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELG---I-------F-----ARVTPEEKAALVEALQKK-GRVVA 410 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcC---c-------e-----eccCHHHHHHHHHHHHHC-CCEEE
Confidence 788999999999999999999999999999999988884 2 1 112344444555555443 56899
Q ss_pred EEeCCHhhHHHHHHcCCc
Q 010820 456 FVTDVYQEATAAKAAGLE 473 (500)
Q Consensus 456 ~VGDs~~Di~aA~~aG~~ 473 (500)
||||..||..+-+.+++.
T Consensus 411 ~vGDg~nD~~al~~Advg 428 (499)
T TIGR01494 411 MTGDGVNDAPALKKADVG 428 (499)
T ss_pred EECCChhhHHHHHhCCCc
Confidence 999999999999988765
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.096 Score=50.53 Aligned_cols=44 Identities=9% Similarity=0.050 Sum_probs=34.9
Q ss_pred CHHHHHHHHHHcCCCC--CCcEEEEeCCHhhHHHHHHcCCcEEEEcC
Q 010820 435 ETPSYVEITNSLGVDK--PSEILFVTDVYQEATAAKAAGLEVVISIR 479 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~~--p~~~l~VGDs~~Di~aA~~aG~~~i~v~~ 479 (500)
+......+++.+++ + .+++++|||+.||+.+.+.+|...+.-+.
T Consensus 177 Kg~ai~~l~~~~~i-~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na 222 (256)
T TIGR01486 177 KGKAANALKQFYNQ-PGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGP 222 (256)
T ss_pred HHHHHHHHHHHHhh-cCCCceEEEEcCCHhhHHHHHHCCEEEEeCCC
Confidence 44455666777765 3 78899999999999999999988777664
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=94.16 E-value=0.085 Score=48.85 Aligned_cols=35 Identities=23% Similarity=0.272 Sum_probs=30.1
Q ss_pred CCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhcc
Q 010820 379 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 413 (500)
Q Consensus 379 pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~ 413 (500)
+.+.+.|++|+++|.+++++|+.....+..+++.+
T Consensus 20 ~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~ 54 (204)
T TIGR01484 20 PETIEALERLREAGVKVVLVTGRSLAEIKELLKQL 54 (204)
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhC
Confidence 44668999999999999999999999988888764
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=93.76 E-value=0.14 Score=59.27 Aligned_cols=101 Identities=17% Similarity=0.170 Sum_probs=70.9
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccc-------------------------cccc-----
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-------------------------YLSG----- 424 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~-------------------------~f~~----- 424 (500)
-++.|++++++++|+++|+++.++|+........+.+.+|+..-.. .+++
T Consensus 567 Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~ 646 (997)
T TIGR01106 567 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD 646 (997)
T ss_pred CCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh
Confidence 3789999999999999999999999999999999998886521000 0000
Q ss_pred --------cccc---cccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 010820 425 --------FFDT---AVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 425 --------~~d~---~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
.... ....+-.|+--.++.+.+.-. ..-+.|+||+.||+.+-+.+.+....
T Consensus 647 l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~-g~vv~~~GDG~ND~paLk~AdVGiam 708 (997)
T TIGR01106 647 MTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAM 708 (997)
T ss_pred CCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHC-CCEEEEECCCcccHHHHhhCCcceec
Confidence 0000 012233455555555555544 56789999999999999998876554
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=93.43 E-value=0.3 Score=56.96 Aligned_cols=41 Identities=7% Similarity=0.127 Sum_probs=38.2
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCc
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNY 415 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~ 415 (500)
-++.|++.++++.|++.|+++.++|+........+-+..|+
T Consensus 655 d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gi 695 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGI 695 (1054)
T ss_pred cCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC
Confidence 37889999999999999999999999999999999888865
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=93.40 E-value=0.11 Score=50.12 Aligned_cols=14 Identities=21% Similarity=0.377 Sum_probs=9.1
Q ss_pred EEEEeCCCCcccCC
Q 010820 87 MYVLSGNGTTLSSP 100 (500)
Q Consensus 87 i~~vd~~g~~~~g~ 100 (500)
++..|+||..+...
T Consensus 1 li~~DlDGTLl~~~ 14 (256)
T TIGR00099 1 LIFIDLDGTLLNDD 14 (256)
T ss_pred CEEEeCCCCCCCCC
Confidence 35677787777543
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.23 E-value=0.17 Score=49.09 Aligned_cols=42 Identities=12% Similarity=0.057 Sum_probs=33.5
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHc---CCcEEEE
Q 010820 435 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAA---GLEVVIS 477 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~a---G~~~i~v 477 (500)
|.....++++.+++. .++++++||+.+|+.+-+.+ +..+|.|
T Consensus 175 Kg~al~~ll~~~~~~-~~~v~~~GD~~nD~~mf~~~~~~~g~~vav 219 (266)
T PRK10187 175 KGEAIAAFMQEAPFA-GRTPVFVGDDLTDEAGFAVVNRLGGISVKV 219 (266)
T ss_pred HHHHHHHHHHhcCCC-CCeEEEEcCCccHHHHHHHHHhcCCeEEEE
Confidence 566777788888887 88999999999999998877 3444555
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=92.88 E-value=0.1 Score=50.53 Aligned_cols=12 Identities=25% Similarity=0.537 Sum_probs=5.7
Q ss_pred eEEEEecCCccc
Q 010820 285 RCIVLDIEGTTT 296 (500)
Q Consensus 285 k~vlFD~DGTL~ 296 (500)
|+|+||+||||+
T Consensus 3 kli~~DlDGTLl 14 (266)
T PRK10976 3 QVVASDLDGTLL 14 (266)
T ss_pred eEEEEeCCCCCc
Confidence 444444444444
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.58 E-value=0.39 Score=52.52 Aligned_cols=100 Identities=16% Similarity=0.170 Sum_probs=73.6
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccc----------ccccccc-c--------ccCCCCH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY----------LSGFFDT-A--------VGNKRET 436 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~----------f~~~~d~-~--------~~~KP~p 436 (500)
+|.|++.+.++.+++.|+++.++|+........+.++.|+.+-.+- ||..-+. . ....-.|
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P 663 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEP 663 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCc
Confidence 8999999999999999999999999999999999999965433221 2222211 0 0112255
Q ss_pred HHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 010820 437 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 437 ~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
.--.++.+.|.-. .+=+.|-||+.||--+-+.+.+....
T Consensus 664 ~HK~kIVeaLq~~-geivAMTGDGVNDApALK~AdIGIAM 702 (972)
T KOG0202|consen 664 QHKLKIVEALQSR-GEVVAMTGDGVNDAPALKKADIGIAM 702 (972)
T ss_pred hhHHHHHHHHHhc-CCEEEecCCCccchhhhhhcccceee
Confidence 5566777777765 67889999999999998888765433
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=92.54 E-value=0.25 Score=47.36 Aligned_cols=30 Identities=17% Similarity=0.029 Sum_probs=25.2
Q ss_pred CCcEEEEeC----CHhhHHHHHHcCCcEEEEcCC
Q 010820 451 PSEILFVTD----VYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 451 p~~~l~VGD----s~~Di~aA~~aG~~~i~v~~~ 480 (500)
+++++.+|| +.||+++-+.-|+.++-|..+
T Consensus 200 ~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~ 233 (245)
T PLN02423 200 FDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSP 233 (245)
T ss_pred cCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCH
Confidence 678999999 689999988888888888654
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.40 E-value=0.48 Score=43.66 Aligned_cols=35 Identities=17% Similarity=0.134 Sum_probs=29.4
Q ss_pred HHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcc
Q 010820 382 PEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYG 416 (500)
Q Consensus 382 ~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~ 416 (500)
.+.+.+|++.|+++..+|+.++..+...-+.++..
T Consensus 29 ~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 29 APVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred chHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 36788899999999999999999988888888543
|
|
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=92.29 E-value=0.088 Score=46.71 Aligned_cols=82 Identities=21% Similarity=0.224 Sum_probs=53.1
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccc-cccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDL-RKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l-~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
..+.||+.++|+.|.+. +.++|.|.+.+.+...+++.+. - ..+|...+ +.... ... .+.+-+++++-+ .
T Consensus 35 v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ld---p~~~~~~~~~~r~~~~~-~~~--~~~KdL~~l~~~-~ 106 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALD---PNGKLFSRRLYRDDCTF-DKG--SYIKDLSKLGRD-L 106 (159)
T ss_dssp EEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHT---TTTSSEEEEEEGGGSEE-ETT--EEE--GGGSSS--G
T ss_pred EeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhh---hhccccccccccccccc-ccc--ccccchHHHhhc-c
Confidence 35789999999999664 9999999999999999998883 2 23465555 11111 111 112566677765 8
Q ss_pred CcEEEEeCCHhhH
Q 010820 452 SEILFVTDVYQEA 464 (500)
Q Consensus 452 ~~~l~VGDs~~Di 464 (500)
+++++|+|++.-.
T Consensus 107 ~~vvivDD~~~~~ 119 (159)
T PF03031_consen 107 DNVVIVDDSPRKW 119 (159)
T ss_dssp GGEEEEES-GGGG
T ss_pred ccEEEEeCCHHHe
Confidence 9999999998643
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=91.68 E-value=0.42 Score=47.72 Aligned_cols=98 Identities=16% Similarity=0.194 Sum_probs=58.8
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcH--------HHHHHHHhccCcc-ccc-ccccccccccccCCCCHHHHHHHHHHc
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSR--------LAQRLIFGNSNYG-DLR-KYLSGFFDTAVGNKRETPSYVEITNSL 446 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~--------~~~~~~l~~~~~~-~l~-~~f~~~~d~~~~~KP~p~~~~~~l~~l 446 (500)
++|.+..=|+.|.+.|+.+++.||... .....+++++-.. ++. .++... .....+||..-|++...+..
T Consensus 105 l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~anl~vPi~~~~A~-~~~~yRKP~tGMwe~~~~~~ 183 (422)
T KOG2134|consen 105 LFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVANLGVPIQLLAAI-IKGKYRKPSTGMWEFLKRLE 183 (422)
T ss_pred eccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHhcCCceEEeeec-cCCcccCcchhHHHHHHHHh
Confidence 667777788888888999999888431 1222222222000 110 001111 11345799999999988777
Q ss_pred CCC-C--CCcEEEEeCC---------------HhhHHHHHHcCCcEE
Q 010820 447 GVD-K--PSEILFVTDV---------------YQEATAAKAAGLEVV 475 (500)
Q Consensus 447 ~v~-~--p~~~l~VGDs---------------~~Di~aA~~aG~~~i 475 (500)
+-. + -+.+.||||. ..|+.-|.++|+.+.
T Consensus 184 nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN~gvkF~ 230 (422)
T KOG2134|consen 184 NDSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFAANAGVKFK 230 (422)
T ss_pred hccceeeechhhhhhhhccCccccccCcccccHHHHHHHHhcCCccC
Confidence 532 1 4455688773 368999999998764
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.12 E-value=0.63 Score=48.22 Aligned_cols=85 Identities=13% Similarity=0.194 Sum_probs=65.0
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEE
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 455 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l 455 (500)
...||.+|.+.+||+.|++...||+.++-....+-+.. |+++|+. ..||. --....++.+-+ .+=+.
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EA---GVDdfiA-------eatPE--dK~~~I~~eQ~~-grlVA 513 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA---GVDDFIA-------EATPE--DKLALIRQEQAE-GRLVA 513 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHh---Cchhhhh-------cCChH--HHHHHHHHHHhc-CcEEE
Confidence 47799999999999999999999999999999888888 4444431 24553 334556666665 77889
Q ss_pred EEeCCHhhHHHHHHcCCc
Q 010820 456 FVTDVYQEATAAKAAGLE 473 (500)
Q Consensus 456 ~VGDs~~Di~aA~~aG~~ 473 (500)
|.||..||.-+-..+...
T Consensus 514 MtGDGTNDAPALAqAdVg 531 (681)
T COG2216 514 MTGDGTNDAPALAQADVG 531 (681)
T ss_pred EcCCCCCcchhhhhcchh
Confidence 999999998776666543
|
|
| >COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.55 E-value=0.69 Score=47.11 Aligned_cols=99 Identities=12% Similarity=0.083 Sum_probs=75.3
Q ss_pred cccCC--CHHHHHHHHHhCCcEEEEEcCCc--HHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCC
Q 010820 375 GEVFD--DVPEALEKWHSLGTKVYIYSSGS--RLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGV 448 (500)
Q Consensus 375 ~~~~p--gv~~~L~~L~~~G~~l~v~Tn~~--~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v 448 (500)
..++| ...++.+.+.+.|.++.++|... .+..+.+|-..|. .-.-..++ ......|-..+.|..+++.-++
T Consensus 96 evLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~---d~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnV 172 (635)
T COG5610 96 EVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGP---DFNNIPIYMSSEFRLKKNSGNLFKAVLKLENV 172 (635)
T ss_pred eEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCC---CccCceeeecceeehhcccchHHHHHHhhcCC
Confidence 34554 45789999999999999999954 5666777766632 11111112 2234468889999999999999
Q ss_pred CCCCcEEEEeCCH-hhHHHHHHcCCcEEEE
Q 010820 449 DKPSEILFVTDVY-QEATAAKAAGLEVVIS 477 (500)
Q Consensus 449 ~~p~~~l~VGDs~-~Di~aA~~aG~~~i~v 477 (500)
+ |...+++||+. .|+..+++.|+.|.+.
T Consensus 173 d-~~~w~H~GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 173 D-PKKWIHCGDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred C-hhheEEecCchhhhhcCccccchhHHHH
Confidence 9 99999999998 8999999999999766
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=89.69 E-value=0.89 Score=43.76 Aligned_cols=9 Identities=33% Similarity=0.331 Sum_probs=3.8
Q ss_pred EEeCCCCcc
Q 010820 89 VLSGNGTTL 97 (500)
Q Consensus 89 ~vd~~g~~~ 97 (500)
.+|+||..+
T Consensus 3 ~~DlDGTll 11 (256)
T TIGR01486 3 FTDLDGTLL 11 (256)
T ss_pred EEcCCCCCc
Confidence 344444443
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=89.68 E-value=0.4 Score=45.35 Aligned_cols=21 Identities=19% Similarity=0.400 Sum_probs=15.9
Q ss_pred CHHHHHHHHHhCCcEEEEEcC
Q 010820 380 DVPEALEKWHSLGTKVYIYSS 400 (500)
Q Consensus 380 gv~~~L~~L~~~G~~l~v~Tn 400 (500)
-+.++++.++++++.+.+.|+
T Consensus 83 ~~~~i~~~~~~~~~~~~~~~~ 103 (254)
T PF08282_consen 83 DVKKILKYLKEHNISFFFYTD 103 (254)
T ss_dssp HHHHHHHHHHHTTCEEEEEES
T ss_pred chhheeehhhhcccccccccc
Confidence 356788888888887777764
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=89.57 E-value=0.52 Score=44.56 Aligned_cols=40 Identities=8% Similarity=0.046 Sum_probs=32.5
Q ss_pred CHHHHHHHHHHcCC--CCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 010820 435 ETPSYVEITNSLGV--DKPSEILFVTDVYQEATAAKAAGLEVV 475 (500)
Q Consensus 435 ~p~~~~~~l~~l~v--~~p~~~l~VGDs~~Di~aA~~aG~~~i 475 (500)
++.....+++.+++ + +.++++|||+.||+.+.+.+|+..+
T Consensus 182 K~~al~~l~~~~~~~~~-~~~~i~~GD~~nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 182 KGKAIKRLLDLYKLRPG-AIESVGLGDSENDFPMFEVVDLAFL 223 (225)
T ss_pred HHHHHHHHHHHhccccC-cccEEEEcCCHHHHHHHHhCCCcEe
Confidence 45566677777755 5 7799999999999999999999764
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=89.42 E-value=0.66 Score=46.86 Aligned_cols=43 Identities=9% Similarity=-0.001 Sum_probs=25.2
Q ss_pred cEEEEeCCHhhHHHHHHcC----CcEEEEcCCCCCCCCCCCCceeeCCccC
Q 010820 453 EILFVTDVYQEATAAKAAG----LEVVISIRPGNGPLPENHGFKTINSFAE 499 (500)
Q Consensus 453 ~~l~VGDs~~Di~aA~~aG----~~~i~v~~~~~~~~~~~~~~~~i~~l~e 499 (500)
-.+||||...|-.+.+.+. .-.|.|... .. ...+.|.+++..|
T Consensus 304 ~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~-~k---~T~A~y~L~dp~e 350 (366)
T PLN03017 304 FPVYIGDDRTDEDAFKMLRDRGEGFGILVSKF-PK---DTDASYSLQDPSE 350 (366)
T ss_pred eEEEeCCCCccHHHHHHHhhcCCceEEEECCC-CC---CCcceEeCCCHHH
Confidence 3699999998877777652 234555321 11 1223677777654
|
|
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=89.24 E-value=2.9 Score=43.78 Aligned_cols=91 Identities=11% Similarity=-0.011 Sum_probs=51.1
Q ss_pred HHHHHHhCCcEEEEEcCCcHHHHHHHHhc-cCcccccc----cc-cccccccccCCCCHHH-HHHHHHHcCCCCCCcEEE
Q 010820 384 ALEKWHSLGTKVYIYSSGSRLAQRLIFGN-SNYGDLRK----YL-SGFFDTAVGNKRETPS-YVEITNSLGVDKPSEILF 456 (500)
Q Consensus 384 ~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~-~~~~~l~~----~f-~~~~d~~~~~KP~p~~-~~~~l~~l~v~~p~~~l~ 456 (500)
.++..+..| +++|+|..++...+..++. +|.+.+-. .. .+++......+.-.+. ..++.+.++- ....+=
T Consensus 101 ~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D~VvGTEL~v~~~G~~TG~~~G~n~~ek~~~rl~~~~g~--~~~~vg 177 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRADEVIGSELVVNRFGFATGFIRGTDVDQSVANRVANLFVD--ERPQLG 177 (498)
T ss_pred HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCceEEeeeEEEeeccEEEEEEecCccHHHHHHHHHHHhCc--cCceec
Confidence 667777778 9999999999999999998 65332200 01 1333111112222333 3344444653 344666
Q ss_pred EeCCHhhHHHHHHcCCcEEEEcC
Q 010820 457 VTDVYQEATAAKAAGLEVVISIR 479 (500)
Q Consensus 457 VGDs~~Di~aA~~aG~~~i~v~~ 479 (500)
+||+..|-.-..- ++.+.+..
T Consensus 178 ~~~~~~~~~f~~~--ck~~~~~~ 198 (498)
T PLN02499 178 LGRISASSSFLSL--CKEQIHPP 198 (498)
T ss_pred ccCCcccchhhhh--CceEEecC
Confidence 7787755544433 44555543
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=89.09 E-value=0.49 Score=51.07 Aligned_cols=18 Identities=22% Similarity=0.097 Sum_probs=15.7
Q ss_pred CCCceEEEEecCCccccc
Q 010820 281 GLFPRCIVLDIEGTTTPI 298 (500)
Q Consensus 281 ~~~~k~vlFD~DGTL~~~ 298 (500)
.+++|+|+||+||||++.
T Consensus 305 ~~~iKLIa~DLDGTLLn~ 322 (580)
T PLN02887 305 KPKFSYIFCDMDGTLLNS 322 (580)
T ss_pred ccCccEEEEeCCCCCCCC
Confidence 457999999999999954
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=88.90 E-value=1.1 Score=52.47 Aligned_cols=40 Identities=18% Similarity=0.248 Sum_probs=35.9
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCc
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNY 415 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~ 415 (500)
++.||+.++++.|++.|+++.++|+........+-...++
T Consensus 631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~i 670 (1057)
T TIGR01652 631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRL 670 (1057)
T ss_pred hhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCC
Confidence 7899999999999999999999999999888888666653
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=88.50 E-value=0.75 Score=46.84 Aligned_cols=35 Identities=20% Similarity=0.096 Sum_probs=27.4
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhc
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN 412 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~ 412 (500)
+-|++.++|+.|.+. .+++|+|+.....+...+.-
T Consensus 142 ~s~~~~~aL~~La~~-~~VAIVSGR~~~~L~~~l~~ 176 (384)
T PLN02580 142 MSDAMRSAVKNVAKY-FPTAIISGRSRDKVYELVGL 176 (384)
T ss_pred CCHHHHHHHHHHhhC-CCEEEEeCCCHHHHHHHhCC
Confidence 556778888888877 57999999888888777653
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=88.17 E-value=2.6 Score=40.41 Aligned_cols=101 Identities=9% Similarity=0.029 Sum_probs=60.4
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCc---HHHHHHHHhccCcccccccccccccc-------cccCCC-------CHHHH
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGS---RLAQRLIFGNSNYGDLRKYLSGFFDT-------AVGNKR-------ETPSY 439 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~---~~~~~~~l~~~~~~~l~~~f~~~~d~-------~~~~KP-------~p~~~ 439 (500)
++|++.++|++|+++|.+++++||++ .......++.+|+ ....+.++.. ....++ -.+.+
T Consensus 18 ~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~---~~~~~~iit~~~~~~~~l~~~~~~~~v~~lg~~~l 94 (249)
T TIGR01457 18 RIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDI---PATLETVFTASMATADYMNDLKLEKTVYVIGEEGL 94 (249)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCC---CCChhhEeeHHHHHHHHHHhcCCCCEEEEEcChhH
Confidence 67789999999999999999999844 6667777877754 2222223210 011111 12345
Q ss_pred HHHHHHcCCC---CCCcEEEEeCC-H---hhHHHHH---HcCCcEEEEcCC
Q 010820 440 VEITNSLGVD---KPSEILFVTDV-Y---QEATAAK---AAGLEVVISIRP 480 (500)
Q Consensus 440 ~~~l~~l~v~---~p~~~l~VGDs-~---~Di~aA~---~aG~~~i~v~~~ 480 (500)
...++..|+. +..+.++||.. . .++..|. +.|+..+..+.+
T Consensus 95 ~~~l~~~g~~~~~~~~~~Vvvg~~~~~~y~~l~~a~~~l~~g~~~i~tN~D 145 (249)
T TIGR01457 95 KEAIKEAGYVEDKEKPDYVVVGLDRQIDYEKFATATLAIRKGAHFIGTNGD 145 (249)
T ss_pred HHHHHHcCCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCeEEEECCC
Confidence 6677776743 12356777743 2 3443332 458887776654
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=87.82 E-value=1.3 Score=50.24 Aligned_cols=36 Identities=11% Similarity=0.092 Sum_probs=27.8
Q ss_pred CHHHHHHHHH---HcCCCCCCcEEEEeCCHhhHHHHHHcC
Q 010820 435 ETPSYVEITN---SLGVDKPSEILFVTDVYQEATAAKAAG 471 (500)
Q Consensus 435 ~p~~~~~~l~---~l~v~~p~~~l~VGDs~~Di~aA~~aG 471 (500)
|......+++ .++.. ++.+++|||..+|..+-+.++
T Consensus 763 KG~Al~~Ll~~~~~~g~~-~d~vl~~GDD~nDedMF~~~~ 801 (854)
T PLN02205 763 KGLVAKRLLSIMQERGML-PDFVLCIGDDRSDEDMFEVIT 801 (854)
T ss_pred HHHHHHHHHHHHHhcCCC-cccEEEEcCCccHHHHHHHhh
Confidence 4445555653 35777 899999999999999988876
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=87.70 E-value=0.9 Score=45.71 Aligned_cols=42 Identities=12% Similarity=0.066 Sum_probs=24.1
Q ss_pred EEEEeCCHhhHHHHHHcC----CcEEEEcCCCCCCCCCCCCceeeCCccC
Q 010820 454 ILFVTDVYQEATAAKAAG----LEVVISIRPGNGPLPENHGFKTINSFAE 499 (500)
Q Consensus 454 ~l~VGDs~~Di~aA~~aG----~~~i~v~~~~~~~~~~~~~~~~i~~l~e 499 (500)
.+||||...|-.+.+.+. --.|.|..+. ....+.|.+++..|
T Consensus 291 pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~----k~T~A~y~L~dp~e 336 (354)
T PLN02151 291 PIYIGDDRTDEDAFKILRDKKQGLGILVSKYA----KETNASYSLQEPDE 336 (354)
T ss_pred EEEEcCCCcHHHHHHHHhhcCCCccEEeccCC----CCCcceEeCCCHHH
Confidence 699999998877766542 1234443211 12234677777654
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=85.57 E-value=1.4 Score=51.65 Aligned_cols=36 Identities=25% Similarity=0.338 Sum_probs=31.9
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHh
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFG 411 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~ 411 (500)
++.+|+.++++.|+++|+++.++|+........+-.
T Consensus 726 ~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~ 761 (1178)
T PLN03190 726 KLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGY 761 (1178)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH
Confidence 789999999999999999999999988777766643
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=85.53 E-value=1.5 Score=49.14 Aligned_cols=48 Identities=13% Similarity=-0.031 Sum_probs=29.7
Q ss_pred CCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccC
Q 010820 447 GVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE 499 (500)
Q Consensus 447 ~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e 499 (500)
+++ ++.++++||+.+|..+.+.++.....|.-+.. ...+.+++++..|
T Consensus 668 ~~~-~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~s~A~~~l~~~~e 715 (726)
T PRK14501 668 AGP-YDFVLAIGDDTTDEDMFRALPETAITVKVGPG----ESRARYRLPSQRE 715 (726)
T ss_pred cCC-CCEEEEECCCCChHHHHHhcccCceEEEECCC----CCcceEeCCCHHH
Confidence 344 67999999999999999987432222222221 1223666666443
|
|
| >COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.55 E-value=3 Score=42.40 Aligned_cols=44 Identities=5% Similarity=-0.031 Sum_probs=28.3
Q ss_pred cccCCC---CHHHHHHHHHHcCCCCCCcEE-EEeCCHhhHHHHHHcCCcE
Q 010820 429 AVGNKR---ETPSYVEITNSLGVDKPSEIL-FVTDVYQEATAAKAAGLEV 474 (500)
Q Consensus 429 ~~~~KP---~p~~~~~~l~~l~v~~p~~~l-~VGDs~~Di~aA~~aG~~~ 474 (500)
.+..|| +..++..+.+.+.. +...+ =+|+...|+.+=++.|++.
T Consensus 470 lIlrkpE~FKiayLndl~slf~e--~~PFyAGFGNriTDvisY~~vgIp~ 517 (580)
T COG5083 470 LILRKPEVFKIAYLNDLKSLFIE--FDPFYAGFGNRITDVISYSNVGIPK 517 (580)
T ss_pred hhhcChHHHHHHHHHHHHHhhCc--CChhhccccccchhheeeccccCCh
Confidence 444566 44455555555544 33332 4789999999999998876
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=84.54 E-value=1.7 Score=42.27 Aligned_cols=14 Identities=29% Similarity=0.503 Sum_probs=9.7
Q ss_pred eEEEEecCCccccc
Q 010820 285 RCIVLDIEGTTTPI 298 (500)
Q Consensus 285 k~vlFD~DGTL~~~ 298 (500)
.+|+||+||||++.
T Consensus 15 ~li~~D~DGTLl~~ 28 (266)
T PRK10187 15 YAWFFDLDGTLAEI 28 (266)
T ss_pred EEEEEecCCCCCCC
Confidence 56777777777743
|
|
| >KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.08 E-value=2.3 Score=45.35 Aligned_cols=100 Identities=14% Similarity=0.226 Sum_probs=60.3
Q ss_pred CHHHHHHHHHhCCcEEEEEcCCc---HHHHHHHHhccCc-------ccc----cccccccccccccCCC---CHHHHHHH
Q 010820 380 DVPEALEKWHSLGTKVYIYSSGS---RLAQRLIFGNSNY-------GDL----RKYLSGFFDTAVGNKR---ETPSYVEI 442 (500)
Q Consensus 380 gv~~~L~~L~~~G~~l~v~Tn~~---~~~~~~~l~~~~~-------~~l----~~~f~~~~d~~~~~KP---~p~~~~~~ 442 (500)
||.++..+++++||++.-+|... ....+..|..+.- +.+ ...|...+-.++.+|| +-+++..+
T Consensus 562 GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdGPViLSPd~lf~Al~REVI~RkPe~FKIAcL~DI 641 (738)
T KOG2116|consen 562 GVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDGPVILSPDSLFAALHREVIERKPEVFKIACLTDI 641 (738)
T ss_pred hHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCCCEEeCCCcchHHHHHHHHHcCchhhhHHHHHHH
Confidence 56677778888888888888744 3333444444320 000 1112222234566788 56677777
Q ss_pred HHHcCCCCCCcE-EEEeCCHhhHHHHHHcCCcE--EEEcCC
Q 010820 443 TNSLGVDKPSEI-LFVTDVYQEATAAKAAGLEV--VISIRP 480 (500)
Q Consensus 443 l~~l~v~~p~~~-l~VGDs~~Di~aA~~aG~~~--i~v~~~ 480 (500)
...+.-. .... .-+|+..+|+.+=++.|+.. |++..+
T Consensus 642 k~LF~p~-~nPFYAgFGNR~TDviSY~~VgVP~~RIFtINp 681 (738)
T KOG2116|consen 642 KNLFPPS-GNPFYAGFGNRITDVISYRQVGVPLSRIFTINP 681 (738)
T ss_pred HHhcCCC-CCceeeecCCCcccceeeeeecCCccceEEECC
Confidence 7777632 3333 33789999999999999987 555444
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.73 E-value=2.6 Score=40.74 Aligned_cols=35 Identities=26% Similarity=0.147 Sum_probs=20.5
Q ss_pred cCCCHHHHHHHHHhC-CcEEEEEcCCcHHHHHHHHh
Q 010820 377 VFDDVPEALEKWHSL-GTKVYIYSSGSRLAQRLIFG 411 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~-G~~l~v~Tn~~~~~~~~~l~ 411 (500)
+.+++.++|+.|..+ ...++|+|+.+....+..+.
T Consensus 41 ~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~ 76 (266)
T COG1877 41 PDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG 76 (266)
T ss_pred CCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC
Confidence 555566666666554 22366666666666666554
|
|
| >KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.97 E-value=1.9 Score=43.54 Aligned_cols=100 Identities=15% Similarity=0.135 Sum_probs=71.5
Q ss_pred CCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCC------------------------
Q 010820 378 FDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNK------------------------ 433 (500)
Q Consensus 378 ~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~K------------------------ 433 (500)
.+-.+.+|..++++|-++.++||+...+........-..++..+|+-.. +...|
T Consensus 200 d~~~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~--~~a~Kp~ff~e~~vlreV~t~~g~l~~g~ 277 (424)
T KOG2469|consen 200 DGTIVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVE--TRAAKPGFFHEGTVLREVEPQEGLLKNGD 277 (424)
T ss_pred cCccccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEE--EeccCCccccccceeeeeccccccccccc
Confidence 3444559999999999999999999888888776663235555554333 11112
Q ss_pred ----------CCHHHHHHHHHHcCCCCCCcEEEEeCCH-hhHHHH-HHcCCcEEEEcCC
Q 010820 434 ----------RETPSYVEITNSLGVDKPSEILFVTDVY-QEATAA-KAAGLEVVISIRP 480 (500)
Q Consensus 434 ----------P~p~~~~~~l~~l~v~~p~~~l~VGDs~-~Di~aA-~~aG~~~i~v~~~ 480 (500)
+.+-.-..+++.+++. ..++++|||+. .||.-- ++-|+.++.|...
T Consensus 278 ~~~p~e~~~~ySggs~~~~~~~l~~~-g~diLy~gdHi~~dvl~skk~~~wrt~lv~pe 335 (424)
T KOG2469|consen 278 NTGPLEQGGVYSGGSLKTVETSMKVK-GKDILYGGDHIWGDVLVSKKRRGWRTVLVAPE 335 (424)
T ss_pred cCCcchhcccCCcchHHHHHHHhccc-ccceeecccceeeeEEecceecceEEEEEehh
Confidence 2445667788888887 89999999998 566544 5589999988754
|
|
| >PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3 | Back alignment and domain information |
|---|
Probab=82.51 E-value=6.4 Score=37.58 Aligned_cols=72 Identities=13% Similarity=0.140 Sum_probs=51.1
Q ss_pred CcEEEEEcCCcHHHHHHHHhccCccccccc---ccccccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHH
Q 010820 392 GTKVYIYSSGSRLAQRLIFGNSNYGDLRKY---LSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAK 468 (500)
Q Consensus 392 G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~---f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~ 468 (500)
-++++++|..+...-.+.++.+ ..| ++..| ...+-||.. +++.++-. +|++|....++.|.
T Consensus 186 piRtalVTAR~apah~RvI~TL-----r~Wgv~vDEaf--FLgG~~K~~----vL~~~~ph-----IFFDDQ~~H~~~a~ 249 (264)
T PF06189_consen 186 PIRTALVTARSAPAHERVIRTL-----RSWGVRVDEAF--FLGGLPKGP----VLKAFRPH-----IFFDDQDGHLESAS 249 (264)
T ss_pred ceEEEEEEcCCCchhHHHHHHH-----HHcCCcHhHHH--HhCCCchhH----HHHhhCCC-----EeecCchhhhhHhh
Confidence 4689999998866668887766 333 33322 223445544 45565544 99999999999999
Q ss_pred HcCCcEEEEcCC
Q 010820 469 AAGLEVVISIRP 480 (500)
Q Consensus 469 ~aG~~~i~v~~~ 480 (500)
.++.++.|..+
T Consensus 250 -~~vps~hVP~g 260 (264)
T PF06189_consen 250 -KVVPSGHVPYG 260 (264)
T ss_pred -cCCCEEeccCC
Confidence 89999999876
|
1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=81.34 E-value=1.2 Score=42.88 Aligned_cols=36 Identities=8% Similarity=0.063 Sum_probs=29.4
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhc
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN 412 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~ 412 (500)
++|++.++|+.|+++|.++.++||+.........++
T Consensus 18 ~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~ 53 (248)
T PRK10444 18 AVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANR 53 (248)
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHH
Confidence 789999999999999999999999886544443333
|
|
| >PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional | Back alignment and domain information |
|---|
Probab=81.00 E-value=16 Score=36.16 Aligned_cols=97 Identities=16% Similarity=0.170 Sum_probs=65.8
Q ss_pred ccCCCHHHHHHHHHhC---CcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 376 EVFDDVPEALEKWHSL---GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~---G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
.++|+..++++..++. |+.+.++++.+....+++. .+|-.-+.++ -..+.+ +.+-.+|+.+..+.+..+++
T Consensus 178 ~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~-~~g~~avmPl-~~pIGs-g~gv~~p~~i~~~~e~~~vp--- 251 (326)
T PRK11840 178 TLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLE-DAGAVAVMPL-GAPIGS-GLGIQNPYTIRLIVEGATVP--- 251 (326)
T ss_pred CcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-hcCCEEEeec-cccccC-CCCCCCHHHHHHHHHcCCCc---
Confidence 4778888888877776 9999666666766666654 3321000111 111111 11222999999999997765
Q ss_pred cEEEEeCCH---hhHHHHHHcCCcEEEEcCC
Q 010820 453 EILFVTDVY---QEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 453 ~~l~VGDs~---~Di~aA~~aG~~~i~v~~~ 480 (500)
++||-.. .|+..|-..|...++++.+
T Consensus 252 --VivdAGIg~~sda~~AmelGadgVL~nSa 280 (326)
T PRK11840 252 --VLVDAGVGTASDAAVAMELGCDGVLMNTA 280 (326)
T ss_pred --EEEeCCCCCHHHHHHHHHcCCCEEEEcce
Confidence 8888654 8999999999999999976
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=80.71 E-value=0.89 Score=38.74 Aligned_cols=14 Identities=29% Similarity=0.382 Sum_probs=12.2
Q ss_pred eEEEEecCCccccc
Q 010820 285 RCIVLDIEGTTTPI 298 (500)
Q Consensus 285 k~vlFD~DGTL~~~ 298 (500)
|+++||+||||++.
T Consensus 1 kli~~DlD~Tl~~~ 14 (128)
T TIGR01681 1 KVIVFDLDNTLWTG 14 (128)
T ss_pred CEEEEeCCCCCCCC
Confidence 57999999999954
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism | Back alignment and domain information |
|---|
Probab=80.09 E-value=28 Score=33.10 Aligned_cols=97 Identities=15% Similarity=0.146 Sum_probs=64.5
Q ss_pred ccCCCHHHHHHHHHhC---CcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 376 EVFDDVPEALEKWHSL---GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~---G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
.++|+..++++..++. |+.+..+++.+....+++. .+|-.-+.. +-..+.+ +.+--+|+.+..+.+..+++
T Consensus 104 ~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~-~~G~~~vmP-lg~pIGs-g~Gi~~~~~I~~I~e~~~vp--- 177 (248)
T cd04728 104 TLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLE-DAGCAAVMP-LGSPIGS-GQGLLNPYNLRIIIERADVP--- 177 (248)
T ss_pred ccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HcCCCEeCC-CCcCCCC-CCCCCCHHHHHHHHHhCCCc---
Confidence 4788888888888777 9988856666666666654 332111111 1111111 12333688998888875554
Q ss_pred cEEEEe---CCHhhHHHHHHcCCcEEEEcCC
Q 010820 453 EILFVT---DVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 453 ~~l~VG---Ds~~Di~aA~~aG~~~i~v~~~ 480 (500)
+++| .++.|+..|...|...+.++..
T Consensus 178 --VI~egGI~tpeda~~AmelGAdgVlV~SA 206 (248)
T cd04728 178 --VIVDAGIGTPSDAAQAMELGADAVLLNTA 206 (248)
T ss_pred --EEEeCCCCCHHHHHHHHHcCCCEEEEChH
Confidence 6776 4469999999999999999876
|
ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH). |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 500 | ||||
| 1yns_A | 261 | Crystal Structure Of Human Enolase-Phosphatase E1 A | 7e-46 | ||
| 1zs9_A | 261 | Crystal Structure Of Human Enolase-Phosphatase E1 L | 8e-45 | ||
| 2g80_A | 253 | Crystal Structure Of Utr4 Protein (Unknown Transcri | 2e-24 | ||
| 2irp_A | 208 | Crystal Structure Of The L-fuculose-1-phosphate Ald | 4e-10 | ||
| 1e46_P | 215 | L-Fuculose 1-Phosphate Aldolase From Escherichia Co | 5e-04 | ||
| 1e47_P | 215 | L-Fuculose 1-Phosphate Aldolase From Escherichia Co | 8e-04 | ||
| 1e48_P | 215 | L-Fuculose 1-Phosphate Aldolase From Escherichia Co | 8e-04 |
| >pdb|1YNS|A Chain A, Crystal Structure Of Human Enolase-Phosphatase E1 And Its Complex With A Substrate Analog Length = 261 | Back alignment and structure |
|
| >pdb|1ZS9|A Chain A, Crystal Structure Of Human Enolase-Phosphatase E1 Length = 261 | Back alignment and structure |
|
| >pdb|2G80|A Chain A, Crystal Structure Of Utr4 Protein (Unknown Transcript 4 Protein) (Yel038w) From Saccharomyces Cerevisiae At 2.28 A Resolution Length = 253 | Back alignment and structure |
|
| >pdb|2IRP|A Chain A, Crystal Structure Of The L-fuculose-1-phosphate Aldolase (aq_1979) From Aquifex Aeolicus Vf5 Length = 208 | Back alignment and structure |
|
| >pdb|1E46|P Chain P, L-Fuculose 1-Phosphate Aldolase From Escherichia Coli Mutant E73s Length = 215 | Back alignment and structure |
|
| >pdb|1E47|P Chain P, L-Fuculose 1-Phosphate Aldolase From Escherichia Coli Mutant E73q Length = 215 | Back alignment and structure |
|
| >pdb|1E48|P Chain P, L-Fuculose 1-Phosphate Aldolase From Escherichia Coli Mutant E73qY113FY209F Length = 215 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A Length = 261 | Back alignment and structure |
|---|
Score = 235 bits (599), Expect = 2e-74
Identities = 95/246 (38%), Positives = 140/246 (56%), Gaps = 31/246 (12%)
Query: 285 RCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQG 344
I+LDIEGTTTPI+FV ++LFPY +NV ++L ++ E Q D+ LLR Q E+D
Sbjct: 11 TVILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQAEEDAHLD 70
Query: 345 VAGAVPIPPGDAGKE----------------------------EGHIWRTGFESNELEGE 376
A +P G+ + +GH+WR F + ++ E
Sbjct: 71 GAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTAGRMKAE 130
Query: 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRET 436
F DV A+ KW G KVYIYSSGS AQ+L+FG+S GD+ + + G FDT +G+K E+
Sbjct: 131 FFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVES 190
Query: 437 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHG--FKTI 494
SY +I +S+G + ILF+TDV +EA+AA+ A + V + +RPGN L ++ + I
Sbjct: 191 ESYRKIADSIGCS-TNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLI 249
Query: 495 NSFAEI 500
SF+E+
Sbjct: 250 TSFSEL 255
|
| >2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus} Length = 208 | Back alignment and structure |
|---|
Score = 216 bits (553), Expect = 3e-68
Identities = 48/216 (22%), Positives = 86/216 (39%), Gaps = 20/216 (9%)
Query: 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDM 87
E I E R ++ GWV T G+I+ KV ++ I ++ SG K ++ PED+
Sbjct: 10 SEKVEEIIEAGRILHSRGWVPATSGNISAKVSEE-------YIAITASGKHKGKLTPEDI 62
Query: 88 YVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMIN 146
++ G + P S L Y+ + AV+H+H + +++++
Sbjct: 63 LLIDYEGRPVGGGKP----------SAETLLHTTVYKLFPEVNAVVHTHSPNATVISIVE 112
Query: 147 PMSKEFRITHMEMIKGIKG-HGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLV 205
+ E++K H + ++ +PI N L + L+
Sbjct: 113 K-KDFVELEDYELLKAFPDIHTHEVKIKIPIFPNEQNIPLLAKEVENYFKTSEDKYGFLI 171
Query: 206 RNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLG 241
R HG+Y WG S A E ++F+ +KL
Sbjct: 172 RGHGLYTWGRSMEEALIHTEALEFIFECELKLLSFH 207
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 Length = 253 | Back alignment and structure |
|---|
Score = 216 bits (552), Expect = 1e-67
Identities = 69/227 (30%), Positives = 113/227 (49%), Gaps = 16/227 (7%)
Query: 285 RCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQG 344
+LDIEGT PISFV E LFPY + V + + + + + ++ L+
Sbjct: 32 STYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQAH 91
Query: 345 VAGAVPIPPGDAGKEE--GHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGS 402
+ V D ++ G++W G+ES +++ V+ D + +++ +V+IYSSGS
Sbjct: 92 ILELVAKDVKDPILKQLQGYVWAHGYESGQIKAPVYADAIDFIKRKK----RVFIYSSGS 147
Query: 403 RLAQRLIFGN--------SNYGDLRKYLSGFFDT-AVGNKRETPSYVEITNSLGVDKPSE 453
AQ+L+FG + DL Y+ G+FD G K ET SY I +G SE
Sbjct: 148 VKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANILRDIGAK-ASE 206
Query: 454 ILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500
+LF++D E AA G+ ++ RPGN P+P+ ++ +F +
Sbjct: 207 VLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 253
|
| >2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A Length = 200 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 2e-26
Identities = 34/199 (17%), Positives = 70/199 (35%), Gaps = 34/199 (17%)
Query: 34 ISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN 93
++ + G +S T G+ +++ L++ SGVQK R+ PED+ +
Sbjct: 9 FRQVGEDLFAQGLISATAGNFSVRTKG--------GFLITKSGVQKARLTPEDLLEVPLE 60
Query: 94 GTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFR 153
G S + + + + Y + A A++H+H + ++ R
Sbjct: 61 GPIPEGAS-----------VE-SVVHREVYRRTGARALVHAHPRVAVALSFHL---SRLR 105
Query: 154 ITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAI-DAYPKATAVLVRNHGIYV 212
+E + + T+ A ++ +A + A L+R HG +
Sbjct: 106 PLDLEG----------QHYLKEVPVLAPKTVSATEEAALSVAEALREHRACLLRGHGAFA 155
Query: 213 WGDSWINAKTQAECYHYLF 231
G + E Y +
Sbjct: 156 VGLKEAPEEALLEAYGLMT 174
|
| >1k0w_A L-ribulose 5 phosphate 4-epimerase; aldolase, isomerase; 2.10A {Escherichia coli} SCOP: c.74.1.1 PDB: 1jdi_A Length = 231 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 3e-24
Identities = 42/220 (19%), Positives = 76/220 (34%), Gaps = 22/220 (10%)
Query: 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPED 86
+++ + + E V+ T G+++ + + ++ PSGV M +D
Sbjct: 2 LEDLKRQVLEANLALPKHNLVTLTWGNVSAVDRER------GVFVIKPSGVDYSIMTADD 55
Query: 87 MYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMI 145
M V+S + + KP SD P Y+ G ++H+H S T+
Sbjct: 56 MVVVSIETGEVVEGAKKP-------SSDT-PTHRLLYQAFPSIGGIVHTH---SRHATIW 104
Query: 146 NPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAID----AYPKAT 201
+ T G + N YE E + + + + +
Sbjct: 105 AQAGQSIPATGTTHANYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDAAQMP 164
Query: 202 AVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLG 241
VLV +HG + WG + +A A + I QL
Sbjct: 165 GVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLA 204
|
| >1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P Length = 215 | Back alignment and structure |
|---|
Score = 90.4 bits (225), Expect = 5e-21
Identities = 38/191 (19%), Positives = 74/191 (38%), Gaps = 33/191 (17%)
Query: 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDM 87
+ I + C LG GT G+++++ D +L++P+G+ E++ +
Sbjct: 4 NKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQD--------GMLITPTGIPYEKLTESHI 55
Query: 88 YVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMIN 146
+ GNG P S+ M AY+ R DA AV+H+H + T ++
Sbjct: 56 VFIDGNGKHEE-------GKLPQ--SE-WRFHMAAYQSRPDANAVVHNH---AVHCTAVS 102
Query: 147 PMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAI-DAYPKATAVLV 205
+++ H + +P Y T L++ + A A L+
Sbjct: 103 ILNRSIPAIHYMIAAAGGNS-------IPCAP---YATFGTRELSEHVALALKNRKATLL 152
Query: 206 RNHGIYVWGDS 216
++HG+ +
Sbjct: 153 QHHGLIACEVN 163
|
| >2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron} Length = 212 | Back alignment and structure |
|---|
Score = 89.6 bits (223), Expect = 9e-21
Identities = 34/200 (17%), Positives = 72/200 (36%), Gaps = 30/200 (15%)
Query: 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDM 87
E L + + + G+++ ++ + L+S +G + E +
Sbjct: 4 DEHIELFLAQAHRYGDAKLMLCSSGNLSWRIGE--------EALISGTGSWVPTLAKEKV 55
Query: 88 YVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMIN 146
+ + T ++ KP + + + +R D V+H + ++ +
Sbjct: 56 SICNIASGTPTN------GVKPS--ME-STFHLGVLRERPDVNVVLHFQSEYATAISCMK 106
Query: 147 PMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAI-DAYPKATAVLV 205
F +T E+ + +P+I Y + LAKA+ +A K +VL+
Sbjct: 107 NKPTNFNVTA-EIPCHVGSE-------IPVIP---YYRPGSPELAKAVVEAMLKHNSVLL 155
Query: 206 RNHGIYVWGDSWINAKTQAE 225
NHG V G + +A
Sbjct: 156 TNHGQVVCGKDFDQVYERAT 175
|
| >1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1 Length = 238 | Back alignment and structure |
|---|
Score = 86.0 bits (213), Expect = 3e-19
Identities = 29/215 (13%), Positives = 70/215 (32%), Gaps = 38/215 (17%)
Query: 26 AVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDD--------------SIPKPQQLIL 71
++ET I ++ G G+I++++ + P+ +L
Sbjct: 2 HMRETIREIQKVAYWLAIKGLSEANAGNISVRLDERPEGYEVKSVNEYGFDYDGPEMYLL 61
Query: 72 MSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR----- 126
++ +G + + +D + + KP + P + + K
Sbjct: 62 ITATGSRMREVYEDDSKICLLHVLPGKHYEILHGNGKP---TSEFPTHLMIHAKFKEMNP 118
Query: 127 DAGAVIHSHGIESCLVTMINPMSKEFR----ITHMEMIKGIKGHGYYDELVVPIIENTAY 182
+ A++H+H + + + + I +I +G + ++E +
Sbjct: 119 EKKAIVHTHPLNLLTLMNLEEFQELLPKMMKIHPEVLIFFPQG--------ISVVE---F 167
Query: 183 ENELTDSLAKAI-DAYPKATAVLVRNHGIYVWGDS 216
E + L + AVL HG+ +G
Sbjct: 168 EKPGSVELGLKTVEKSEGKDAVLWDKHGVVAFGKD 202
|
| >2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A Length = 274 | Back alignment and structure |
|---|
Score = 68.1 bits (166), Expect = 7e-13
Identities = 30/240 (12%), Positives = 68/240 (28%), Gaps = 45/240 (18%)
Query: 19 QAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPK------------- 65
Q V+ + + + GW GG++T+++ D I
Sbjct: 2 QNITYSWFVQG----MIKATTDAWLKGWDERNGGNLTLRLDDADIAPYHDNFHQQPRYIP 57
Query: 66 --------PQQLILMSPSGVQKERM--EPED---MYVLSGNGTTLSSPSPKPYPHKPPKC 112
+++ SG + +P + + +G P
Sbjct: 58 LSQPMPLLANTPFIVTGSGKFFRNVQLDPAANLGIVKVDSDGAGYHILWGLTNEAVPT-- 115
Query: 113 SDCAPLFMKAYEKR------DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGH 166
S+ P ++ +R ++H H +T + + +G
Sbjct: 116 SEL-PAHFLSHCERIKATNGKDRVIMHCHATNLIALTYVLENDTAVFTRQL-----WEGS 169
Query: 167 GYYDELVVPIIENTAYENELTDSLAKAI-DAYPKATAVLVRNHGIYVWGDSWINAKTQAE 225
+ + + TD++ +A K + VL HG++ G + +
Sbjct: 170 TECLVVFPDGVGILPWMVPGTDAIGQATAQEMQKHSLVLWPFHGVFGSGPTLDETFGLID 229
|
| >2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti} Length = 270 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 7e-09
Identities = 31/198 (15%), Positives = 66/198 (33%), Gaps = 38/198 (19%)
Query: 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDM 87
++ + + G + T G I+ + P+ + + + +D+
Sbjct: 39 RKVFEELVTATKILLNEGIM-DTFGHISARD-----PEDPASFFL-AQKLAPSLITVDDI 91
Query: 88 YVLSGNGTTLSSPSPKP--YPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIE----SC 140
+ +G T + Y H + Y+ R D V+H+H
Sbjct: 92 QRFNLDGETSDNRPSYLERYIH------------SEIYKTRPDVQCVLHTHSPAVLPYCF 139
Query: 141 LVTMINPMSKEFRITHMEMIKGIKGHGYYD--ELVVPIIENTAYENELTDSLAKAIDAYP 198
+ T + P +THM G + Y+ + + ++ +A+++
Sbjct: 140 VDTPLRP------VTHMGAFIG-ESVPVYEIRDKHGDETDLFGGSPDVCADIAESLG--- 189
Query: 199 KATAVLVRNHGIYVWGDS 216
T VL+ HG+ G S
Sbjct: 190 SQTVVLMARHGVVNVGKS 207
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.5 bits (125), Expect = 3e-07
Identities = 80/613 (13%), Positives = 165/613 (26%), Gaps = 219/613 (35%)
Query: 19 QAYLEGRAVKET-----RVLISELCRHF----------YTLGWVSGTGGSITIKVHDDSI 63
A+++ K+ +L E H L W + ++ + +
Sbjct: 27 DAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEV 86
Query: 64 PKPQQLILMSPSGVQKERMEPE---DMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFM 120
+ LMSP ++ E+ +P MY+ + + Y + L
Sbjct: 87 LRINYKFLMSP--IKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYL--KLRQ 142
Query: 121 KAYEKRDAGAVIHSHGI----ESCLVTMINPMSKEFRITHMEMIKGI----KGHGYYDEL 172
E R A V+ G+ ++ + + +++ M I + E
Sbjct: 143 ALLELRPAKNVL-IDGVLGSGKTWVALDV---CLSYKVQCK-MDFKIFWLNLKNCNSPET 197
Query: 173 VVPIIENTAYE-------------------NELTDSLAKAIDA--YPKATAVLVRNHGIY 211
V+ +++ Y+ + + L + + + Y VL N
Sbjct: 198 VLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL-LN---- 252
Query: 212 VWGDSW-INAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL--GLGSNGNVNTS 268
V ++ NA F+ + K+ L T TR ++ L + + S
Sbjct: 253 VQ-NAKAWNA----------FNLSCKI----L--LT-----TRFKQVTDFLSAATTTHIS 290
Query: 269 AKAVTEG--SDYGSGLFPRCIVLDIEG------TTTP--ISFVSEVL--FP--------Y 308
+ D L + + + TT P +S ++E +
Sbjct: 291 LDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHV 350
Query: 309 ARDNVGKHLSVTYDTAETQDDIKLLRSQV--EDDLKQGVAGAVPIPPGDAGKEEGHIWRT 366
D + + + + E + K+ IP IW
Sbjct: 351 NCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPS--------AHIPT----ILLSLIW-- 396
Query: 367 GFESNELEGEVFDDVPE-----ALEKW--------HSLGTKV------------------ 395
+ ++ +V V + +EK S+ ++
Sbjct: 397 ---FDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHY 453
Query: 396 ------------------YIYS------SGSRLAQ-----RLIFGNSNY----------- 415
Y YS + R++F + +
Sbjct: 454 NIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTA 513
Query: 416 -----------GDLRKYLSGFFDTAVGNKRETPSYVEITNSLG--VDKPSEILFV---TD 459
L+ Y D P Y + N++ + K E L TD
Sbjct: 514 WNASGSILNTLQQLKFYKPYICD-------NDPKYERLVNAILDFLPKIEENLICSKYTD 566
Query: 460 VYQEATAAKAAGL 472
+ + A A+ +
Sbjct: 567 LLRIALMAEDEAI 579
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} Length = 234 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 3e-06
Identities = 28/156 (17%), Positives = 52/156 (33%), Gaps = 24/156 (15%)
Query: 357 GKEEGHIWRTGFESNELEGEVFDDVPEALEKWHSLGT-KVYIYSSGSRLAQRLIFGNSNY 415
I G ++ E+ V E L+ G K+ + + G L Q S
Sbjct: 86 ADIIRQIVDLGKSLLKMPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSG- 144
Query: 416 GDLRKYLSGFFDTA-VGNKRETPSYVEITNSLGVDKPSEILFV-----TDVYQEATAAKA 469
LS +FD V + + Y+ + + L + PSE+L V +D+ +
Sbjct: 145 ------LSPYFDHIEVMSDKTEKEYLRLLSILQIA-PSELLMVGNSFKSDI----QPVLS 193
Query: 470 AGLEVV-----ISIRPGNGPLPENHGFKTINSFAEI 500
G V + + + K + ++
Sbjct: 194 LGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDL 229
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384 | Back alignment and structure |
|---|
Score = 46.3 bits (109), Expect = 1e-05
Identities = 31/280 (11%), Positives = 74/280 (26%), Gaps = 37/280 (13%)
Query: 251 PTRNFKLGLGSNGNVNTSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLFPYAR 310
+ + + V + ++ L + + ++ + + L +A
Sbjct: 97 SHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFAT 156
Query: 311 DNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEGHIWRTGFES 370
+ + + + L +V + G K ++TG+
Sbjct: 157 TELHVSDA---TLFSLKGALWTLAQEVYQEWYLGSKLY----EDVEKKIARTTFKTGYIY 209
Query: 371 NELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLI---FGNSNY---------GDL 418
E+ D+V L G ++ I + + G Y D+
Sbjct: 210 QEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDV 269
Query: 419 RKYLSGFFDTAVGNK-------------RETPSYVEITNSLGVDKPSEILFVTDVYQEAT 465
+ + + K I + ++ V D +
Sbjct: 270 LEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLL 329
Query: 466 AAKAAGLEVV-----ISIRPGNGPLPENHGFKTINSFAEI 500
+A+ G + + + G L +H IN E+
Sbjct: 330 SAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGEL 369
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 1e-05
Identities = 17/107 (15%), Positives = 30/107 (28%), Gaps = 16/107 (14%)
Query: 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY-LSGFFDTAVG--- 431
E L G I S+ +R+ +G D +
Sbjct: 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAP--------IRELETNGVVDKVLLSGE 69
Query: 432 ---NKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 475
K E ++ +++ + + + V D A AGL V
Sbjct: 70 LGVEKPEEAAFQAAADAIDLP-MRDCVLVDDSILNVRGAVEAGLVGV 115
|
| >3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum} Length = 222 | Back alignment and structure |
|---|
Score = 44.7 bits (104), Expect = 2e-05
Identities = 23/202 (11%), Positives = 60/202 (29%), Gaps = 17/202 (8%)
Query: 45 GWVSGTGGSITIKVHD-DSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPK 103
V GG+ ++K + D + ++ + SG ++ + + L++
Sbjct: 32 DLVLHGGGNTSVKTTERDHAGRIISVLRVKNSGSNLGTIDSRGFTGIRMDDA-LAAAKID 90
Query: 104 PYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGI 163
+ + + +H+ ++ +H + I I
Sbjct: 91 KMTDEAMVDYLKKSMVNPSEPSPSVETFLHAFLPYKFVMH-----------SHADAILSI 139
Query: 164 KGHGYYDELVVPIIENTAYENELTDSLAKAIDAY----PKATAVLVRNHGIYVWGDSWIN 219
+ + I+ N + A + +++R HG+ +GD+
Sbjct: 140 TNTDLPSDQIAKILGNVVVLPYIPPGFTLAKEVMNCFKKGIDGIVLRKHGLLTFGDTGKE 199
Query: 220 AKTQAECYHYLFDAAIKLHQLG 241
A + + I+ G
Sbjct: 200 AYDRHINIVSRAENFIREKTDG 221
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 8e-05
Identities = 45/242 (18%), Positives = 76/242 (31%), Gaps = 47/242 (19%)
Query: 285 RCIVLDIEGTTTPISFVSEVLFPY------ARDNVGKHLSVTYDTA-----ETQDDIKLL 333
+ + D+ T L + K + E +++IK +
Sbjct: 5 KLVTFDVWNT----------LLDLNIMLDEFSHQLAKISGLHIKDVANAVIEVRNEIKKM 54
Query: 334 RSQVEDDLKQGVAGAVPIPPGDAGKEEGHIWRTG--FESNELEGEVFDDVPEALEKWHSL 391
R+Q +D ++ + G+ G + + R N E V + EAL+
Sbjct: 55 RAQASEDPRKVLTGSQEALAGKLKVDVELVKRATARAILNVDESLVLEGTKEALQFVKER 114
Query: 392 GTKVYIYSSGSRLA---QRLIFGNSNYGDLRKYLSGFFDTAVG------NKRETPS---Y 439
G K + + RL+ L F D K P +
Sbjct: 115 GLKTAVIGNVMFWPGSYTRLLLERFG-------LMEFIDKTFFADEVLSYK---PRKEMF 164
Query: 440 VEITNSLGVDKPSEILFVTDVYQE-ATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFA 498
++ NS V KP E L + D Y E A+ G+ V + G+ I S A
Sbjct: 165 EKVLNSFEV-KPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIA 223
Query: 499 EI 500
+
Sbjct: 224 NL 225
|
| >3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV} Length = 273 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 34/242 (14%), Positives = 74/242 (30%), Gaps = 51/242 (21%)
Query: 1 MATLAVNGGGGAAAATHTQAYLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHD 60
++ L + G + + + E RV ++ R W + +V
Sbjct: 6 VSALPLQPGTTPSGGGSVRDRVS-PQEWEVRVKLAAAYRLAALKRWTDHIYTHFSARV-- 62
Query: 61 DSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYP------HKPPKCSD 114
P P + L++ G+ + + ++ + +GT + P+ H
Sbjct: 63 ---PGPDEHFLINAFGLLFDEITASNLVKVDIDGTIVDDPTGLGINYAGYVIHSA----- 114
Query: 115 CAPLFMKAYEKR-DAGAVIHSHGIE----SCLVTMINPMSKEFRITHMEMIKGIKGHGYY 169
+ R D AV+H+H + S + P+S+ +
Sbjct: 115 -------IHAARHDLQAVLHTHTRDGIAVSAQKDGLLPISQH-------------SIAFS 154
Query: 170 DELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHY 229
+ E A + + L + + +++RNHG+ G +
Sbjct: 155 GRVAYHGYEGIALDLSERERLVADLG---DKSVMILRNHGLLTGG------VSVEHAIQQ 205
Query: 230 LF 231
L
Sbjct: 206 LH 207
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} Length = 226 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 1e-04
Identities = 18/121 (14%), Positives = 38/121 (31%), Gaps = 30/121 (24%)
Query: 369 ESNELEGEVFDDVPEALEKWHSLGTKVYIYSS-GSRLAQRLI--FGNSNYGDLRKYLSGF 425
E +V+D + L G + + +S + +++++ F L+ +
Sbjct: 79 AKGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFK----------LAFY 128
Query: 426 FDTAVGNKRETPSYV-------EITNSLGVDKPSEILFV----TDVYQEATAAKAAGLEV 474
FD VG+ SL + + + + DV A L
Sbjct: 129 FDAIVGS-SLDGKLSTKEDVIRYAMESLNIK-SDDAIMIGDREYDV----IGALKNNLPS 182
Query: 475 V 475
+
Sbjct: 183 I 183
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} Length = 263 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 2e-04
Identities = 23/135 (17%), Positives = 44/135 (32%), Gaps = 19/135 (14%)
Query: 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT-----AV 430
+V D + L + + G ++ + S+ R + ++ G L FD A
Sbjct: 106 QVLDGAEDTLRECRTRGLRLAVISNFDRRLEGIL---GGLG-----LREHFDFVLTSEAA 157
Query: 431 G-NKRETPSYVEITNSLGVDKPSEILFVTDVYQE-ATAAKAAGLEVVISIRPGNGPLPEN 488
G K + + E + +P V D Y +A G+ + + P
Sbjct: 158 GWPKPDPRIFQEALRLAHM-EPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVR 216
Query: 489 HGFK---TINSFAEI 500
+ S A +
Sbjct: 217 DSVPKEHILPSLAHL 231
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} Length = 240 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 5e-04
Identities = 17/121 (14%), Positives = 45/121 (37%), Gaps = 29/121 (23%)
Query: 369 ESNELEGEVFDDVPEALEKWHSLGTKVYIYSS-GSRLAQRLI--FGNSNYGDLRKYLSGF 425
+ E ++++++ E LE + G + + +S + A+ ++ F + +
Sbjct: 103 DKGIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFD----------IDRY 152
Query: 426 FDTAVGNKRETPSYV-------EITNSLGVDKPSEILFV----TDVYQEATAAKAAGLEV 474
F G+ + V + + V +++ V D+ AK G++
Sbjct: 153 FKYIAGS-NLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDI----IGAKKIGIDS 207
Query: 475 V 475
+
Sbjct: 208 I 208
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 6e-04
Identities = 22/139 (15%), Positives = 47/139 (33%), Gaps = 37/139 (26%)
Query: 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRE 435
++DD E LE S G K+ + S+ S + L+ + L +FD
Sbjct: 95 FLYDDTLEFLEGLKSNGYKLALVSNASPRVKTLL---EKFD-----LKKYFDALA----- 141
Query: 436 TPSYVEITNSLGVDKPS-------------EILFVTDVYQE-ATAAKAAGLEVVISIRPG 481
++ + KP+ + V D+Y+ AK + ++ ++ +
Sbjct: 142 ------LSYEIKAVKPNPKIFGFALAKVGYPAVHVGDIYELDYIGAKRSYVDPIL-LDRY 194
Query: 482 NGPLPENHGFKTINSFAEI 500
+ + + E
Sbjct: 195 DFYPDVRD---RVKNLREA 210
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 500 | |||
| 1e4c_P | 215 | L-fuculose 1-phosphate aldolase; aldolase (class I | 100.0 | |
| 2irp_A | 208 | Putative aldolase class 2 protein AQ_1979; aldehyd | 100.0 | |
| 3ocr_A | 273 | Class II aldolase/adducin domain protein; PSI-2, m | 100.0 | |
| 2opi_A | 212 | L-fuculose-1-phosphate aldolase; L-fuculose-1-phos | 100.0 | |
| 2fk5_A | 200 | Fuculose-1-phosphate aldolase; class II aldolase, | 100.0 | |
| 1k0w_A | 231 | L-ribulose 5 phosphate 4-epimerase; aldolase, isom | 100.0 | |
| 2z7b_A | 270 | MLR6791 protein; class II aldolase superfamily, ly | 100.0 | |
| 1pvt_A | 238 | Sugar-phosphate aldolase; structural genomics, PSI | 100.0 | |
| 2v9l_A | 274 | Rhamnulose-1-phosphate aldolase; entropy index, me | 100.0 | |
| 3m4r_A | 222 | Uncharacterized protein; short chain dehydrogenase | 100.0 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.94 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.94 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.93 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 99.93 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 99.92 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 99.91 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 99.91 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 99.91 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.91 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 99.9 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 99.9 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 99.9 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 99.89 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 99.89 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 99.89 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.89 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.89 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 99.89 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 99.88 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.88 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 99.88 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.88 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 99.88 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 99.88 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.88 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.88 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 99.87 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 99.87 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.87 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 99.87 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 99.87 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.87 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 99.87 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.86 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 99.86 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 99.86 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 99.86 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 99.86 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 99.86 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 99.86 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.86 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 99.86 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.86 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.85 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.85 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.85 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 99.85 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.85 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.84 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 99.84 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.84 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 99.83 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 99.83 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 99.82 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 99.82 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 99.82 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 99.81 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.81 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 99.81 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 99.81 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 99.8 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.8 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 99.78 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.78 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.77 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 99.75 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 99.74 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.74 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 99.74 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.74 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 99.73 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.73 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 99.73 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.72 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.69 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.69 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 99.69 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.69 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.68 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.67 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.67 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.65 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 99.64 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 99.64 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 99.64 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 99.62 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.61 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.61 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.59 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.59 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.58 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 99.58 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.57 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.57 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.57 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.57 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.56 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.56 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.55 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.31 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.54 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.51 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.51 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.51 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.49 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.49 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 99.49 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.47 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.37 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 99.35 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.34 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 99.27 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 99.27 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.22 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.18 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.08 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 99.07 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.02 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.99 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 98.99 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.97 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 98.89 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.88 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.85 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.85 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.83 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 98.79 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 98.77 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.72 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.67 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.62 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.58 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 98.55 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 98.47 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.46 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.43 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.24 | |
| 4g63_A | 470 | Cytosolic IMP-GMP specific 5'-nucleotidase; struct | 98.22 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 98.11 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.1 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.01 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 97.97 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 97.81 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 97.78 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 97.74 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 97.73 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 97.66 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 97.34 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 96.89 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 96.79 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 96.79 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 96.6 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 96.5 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 95.98 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 95.93 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 95.83 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 95.73 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 95.11 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 95.09 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 95.04 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 94.93 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 94.03 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 92.91 | |
| 3geb_A | 274 | EYES absent homolog 2; hydrolase, activator, alter | 89.95 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 88.79 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 87.28 |
| >1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-45 Score=341.78 Aligned_cols=201 Identities=22% Similarity=0.334 Sum_probs=176.9
Q ss_pred ccHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCC
Q 010820 25 RAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKP 104 (500)
Q Consensus 25 ~~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p 104 (500)
|+.+++|++|++++|.|+++||+.+++||||+|+++ .|||||||++|++++++||++||++|++++|. +|
T Consensus 1 m~~~~~r~~l~~~~r~l~~~gl~~~~~GNiS~R~~~--------~~lItpsG~~~~~l~~~dlv~vd~~G~~~~g~--~p 70 (215)
T 1e4c_P 1 MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQD--------GMLITPTGIPYEKLTESHIVFIDGNGKHEEGK--LP 70 (215)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTSCCTTCCEEEEEETT--------EEEECCTTCCGGGCCGGGCEEECTTCCBCTTC--CC
T ss_pred CCHHHHHHHHHHHHHHHHHCcCCCCCCCeEEEEeCC--------cEEEeCCCCCcccCCHHHEEEEcCCCCCCCCC--CC
Confidence 567889999999999999999999999999999987 79999999999999999999999999999875 35
Q ss_pred CCCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeC-CCC
Q 010820 105 YPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIEN-TAY 182 (500)
Q Consensus 105 ~~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~-~~~ 182 (500)
|+|+.+|+.|||+| |++||+|+||+|+++||+.+. ++++.++ +...++|. .||+++| .++
T Consensus 71 --------Sse~~lH~~iy~~rpdv~aVvHtHs~~~~a~s~~~~---~l~~~~~-~~~~~~~~------~ip~~~y~~~g 132 (215)
T 1e4c_P 71 --------QSEWRFHMAAYQSRPDANAVVHNHAVHCTAVSILNR---SIPAIHY-MIAAAGGN------SIPCAPYATFG 132 (215)
T ss_dssp --------CTTHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTC---CBCSSSG-GGGGGTSS------CBCEECCCCTT
T ss_pred --------ChHHHHHHHHHHhCCCCCEEEEcCcHHHHHHHHhCC---CCCcccH-HHHHhCCC------CcceeeCCCCC
Confidence 99999999999999 999999999999999999975 3444433 33334321 3999999 468
Q ss_pred chhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccccc
Q 010820 183 ENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFK 256 (500)
Q Consensus 183 ~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~ 256 (500)
+.++++.++++|++ .+++||+|||+++||+|+++||.+++.+|++|++++.++++|.+....++++++++.
T Consensus 133 ~~~la~~i~~~l~~---~~avll~nHG~~~~G~~~~eA~~~~~~lE~~a~~~~~a~~~g~~~~~l~~~~~~~~~ 203 (215)
T 1e4c_P 133 TRELSEHVALALKN---RKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAITDPVPVLSDEEIAVVL 203 (215)
T ss_dssp CHHHHHHHHHHTSS---CSEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCSSCCCCCHHHHHHHH
T ss_pred cHHHHHHHHHHhcc---CCEEEEcCCCcEEEeCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHH
Confidence 99999999999986 499999999999999999999999999999999999999999884445555776665
|
| >2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-45 Score=338.82 Aligned_cols=198 Identities=24% Similarity=0.446 Sum_probs=176.6
Q ss_pred cHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCC
Q 010820 26 AVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPY 105 (500)
Q Consensus 26 ~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~ 105 (500)
+.+++|++|++++|.|+++||+.+++||||+|++++ .|||||||+++++++++||++||++|+++ |. .+|
T Consensus 8 ~~~~~r~~l~~~~r~l~~~gl~~~~~GNiS~R~~~~-------~~~ItpsG~~~~~l~~~dlv~vd~~g~~v-~~-~~p- 77 (208)
T 2irp_A 8 KFSEKVEEIIEAGRILHSRGWVPATSGNISAKVSEE-------YIAITASGKHKGKLTPEDILLIDYEGRPV-GG-GKP- 77 (208)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSGGGCCEEEEECSSS-------EEEEECTTSCGGGCCGGGEEEEETTSCBT-TS-CCC-
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCeEEEEeCCC-------EEEEecCCCCcccCCcccEEEEcCCCCCC-CC-CCC-
Confidence 356789999999999999999999999999999884 89999999999999999999999999998 43 355
Q ss_pred CCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCc-ceeeeeeCCCCc
Q 010820 106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDE-LVVPIIENTAYE 183 (500)
Q Consensus 106 ~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~vp~~~~~~~~ 183 (500)
|+|+.+|..|||+| |++||+|+||+|+++||+.+.. .++|..++++++.++|..+++. ..||+++|.+++
T Consensus 78 -------Sse~~lH~~iy~~rpdv~aVvHtHs~~a~a~s~~~~~-~~lp~~~~~~~~~~~g~~~~~~~~~vp~~~~~~g~ 149 (208)
T 2irp_A 78 -------SAETLLHTTVYKLFPEVNAVVHTHSPNATVISIVEKK-DFVELEDYELLKAFPDIHTHEVKIKIPIFPNEQNI 149 (208)
T ss_dssp -------CHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHCCS-SEEECCCHHHHTTCTTCCCSCSSCEEEEECCCSCH
T ss_pred -------CccHHHHHHHHHhCCCCCEEEecCCHHHHHHHhhcCC-CCCCccHHHHHHHhCCccccccccceeeecCCCCH
Confidence 99999999999999 9999999999999999999753 4577777777766655444421 259999999999
Q ss_pred hhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcC
Q 010820 184 NELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLG 241 (500)
Q Consensus 184 ~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g 241 (500)
++|++.++++|++++..+++||+|||+++||+|+++||.+++.+|++|++++.++++|
T Consensus 150 ~~La~~i~~~l~~~~~~~avll~nHG~~~~G~~~~eA~~~~~~lE~~a~~~~~~~~~g 207 (208)
T 2irp_A 150 PLLAKEVENYFKTSEDKYGFLIRGHGLYTWGRSMEEALIHTEALEFIFECELKLLSFH 207 (208)
T ss_dssp HHHHHHHHHHHHHCSCCSCEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhcCCCceEEEEcCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999998655679999999999999999999999999999999999999887
|
| >3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-44 Score=343.13 Aligned_cols=208 Identities=16% Similarity=0.174 Sum_probs=177.7
Q ss_pred hhccHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCC-
Q 010820 23 EGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPS- 101 (500)
Q Consensus 23 ~~~~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~- 101 (500)
.+.+++++|++|++++|.++++||+.+++||||+|++++ .+.|||||||++|++|+++||++||++|++++|..
T Consensus 27 ~~~~e~~~R~~la~~~r~l~~~G~~~~~~GNiS~R~~~~-----~~~flItPsG~~~~~lt~~dlv~vdldG~~v~g~~~ 101 (273)
T 3ocr_A 27 VSPQEWEVRVKLAAAYRLAALKRWTDHIYTHFSARVPGP-----DEHFLINAFGLLFDEITASNLVKVDIDGTIVDDPTG 101 (273)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTCCBTTBCCEEEECSSS-----SCEEEECCTTCCGGGCCGGGCEEEETTCCEEECTTS
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCccCCCcEEEEEecCC-----CCEEEEeCCCCChhhCCccCEEEEeCCCCCccCCCC
Confidence 345688999999999999999999999999999999863 24899999999999999999999999999998731
Q ss_pred -CCCCCCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeC
Q 010820 102 -PKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIEN 179 (500)
Q Consensus 102 -~~p~~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~ 179 (500)
.+| |+|+.+|..||++| |++||+|+||+|++++|+.+.. +++..++.... .| .||+++|
T Consensus 102 ~~~p--------sse~~iH~~Iy~~rpdv~aVvHtHs~~a~a~s~~~~~---l~p~~~~~~~~-~g-------~v~~~~y 162 (273)
T 3ocr_A 102 LGIN--------YAGYVIHSAIHAARHDLQAVLHTHTRDGIAVSAQKDG---LLPISQHSIAF-SG-------RVAYHGY 162 (273)
T ss_dssp CCCC--------TTTTHHHHHHHHHCTTCCEEEEECCHHHHHHHTSTTC---SCSCSHHHHTT-TT-------TEEEECC
T ss_pred CCCC--------ChHHHHHHHHHHhCCCCcEEEEcCChHHHHHHHccCC---CCCccHHHHHh-CC-------CEEEECC
Confidence 223 89999999999999 9999999999999999999753 33333344432 23 3999999
Q ss_pred C-CC-chhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCCCCCCccccc
Q 010820 180 T-AY-ENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLG-LDWSTPNHGPTRNFK 256 (500)
Q Consensus 180 ~-~~-~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g-~~~~~~~~~~~~~~~ 256 (500)
. ++ +.++++.+++.|++ .+++||+|||+++||+|+++||.+++.+|++|++++.++++| .+....++++++++.
T Consensus 163 ~~~~~~~el~~~i~~~l~~---~~avlL~nHG~~~~G~tl~eA~~~~~~lE~~a~i~l~a~~~G~~~~~~l~~~~~~~~~ 239 (273)
T 3ocr_A 163 EGIALDLSERERLVADLGD---KSVMILRNHGLLTGGVSVEHAIQQLHALEYACNIQIAAQSAGNAELVFPPREVIAKVE 239 (273)
T ss_dssp CCSSCCHHHHHHHHHHHTT---CSEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHHHHGGGCGGGCCCCCHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHhCc---CCEEEEcCCceEEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence 5 44 88999999999986 499999999999999999999999999999999999999999 455555666777665
Q ss_pred c
Q 010820 257 L 257 (500)
Q Consensus 257 ~ 257 (500)
.
T Consensus 240 ~ 240 (273)
T 3ocr_A 240 E 240 (273)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-43 Score=327.78 Aligned_cols=198 Identities=15% Similarity=0.187 Sum_probs=169.7
Q ss_pred ccHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeC-CCCcccCCCCC
Q 010820 25 RAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSG-NGTTLSSPSPK 103 (500)
Q Consensus 25 ~~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~-~g~~~~g~~~~ 103 (500)
|..+++|++|++++|+|+++||+.+++||||+|+++ .|||||||+++++++++||++||+ +|++++|. +
T Consensus 1 m~~~~~r~~l~~~~r~l~~~gl~~~~~GNiS~R~~~--------~~lItpsG~~~~~l~~~dlv~vd~~~G~~~~g~--~ 70 (212)
T 2opi_A 1 MITDEHIELFLAQAHRYGDAKLMLCSSGNLSWRIGE--------EALISGTGSWVPTLAKEKVSICNIASGTPTNGV--K 70 (212)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTSSCTTCCEEEEEETT--------EEEEEBTTCCGGGCCGGGEEEEETTTCCBSSSC--C
T ss_pred CccHHHHHHHHHHHHHHHHCCCCCCCCCeEEEEeCC--------eEEEeCCCCChhHCCCCcEEEEECCCCCCCCCC--C
Confidence 345788999999999999999999999999999987 699999999999999999999999 99999874 5
Q ss_pred CCCCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCC---CcccccchhhHhhhhcCCcccCcceeeeeeC
Q 010820 104 PYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPM---SKEFRITHMEMIKGIKGHGYYDELVVPIIEN 179 (500)
Q Consensus 104 p~~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~ 179 (500)
| |+|+.+|+.||++| |++||+|+||+|+++||+.+.. ...+|.. .+ .+++ .||++||
T Consensus 71 p--------Sse~~lH~~iy~~rpdv~aVvHtHs~~~~a~s~~~~~~~~~~~lp~~--~~--~~g~-------~v~~~~y 131 (212)
T 2opi_A 71 P--------SMESTFHLGVLRERPDVNVVLHFQSEYATAISCMKNKPTNFNVTAEI--PC--HVGS-------EIPVIPY 131 (212)
T ss_dssp B--------CTTHHHHHHHHHHCTTCCEEEEECCHHHHHHHHBSSCCSCCCCSTHH--HH--HTCS-------CCCEECC
T ss_pred C--------ChhHHHHHHHHHhCCCCCEEEEeCcHHHHHHHhcCccccccccCchH--HH--HhCC-------CeEEEcC
Confidence 5 99999999999999 9999999999999999998731 0234432 11 2322 3999999
Q ss_pred C-CCchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccc
Q 010820 180 T-AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL 257 (500)
Q Consensus 180 ~-~~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~ 257 (500)
. +++.++++.++++|++ .+++||+|||+++||+|+++||.+++.+|++|++++.+ .|.+.. .++++++++..
T Consensus 132 ~~~g~~~la~~i~~~l~~---~~avll~nHG~~~~G~t~~eA~~~~~~lE~~a~~~~~a--~g~~~~-l~~~~~~~~~~ 204 (212)
T 2opi_A 132 YRPGSPELAKAVVEAMLK---HNSVLLTNHGQVVCGKDFDQVYERATFFEMACRIIVQS--GGDYSV-LTPEEIEDLEI 204 (212)
T ss_dssp CCTTCHHHHHHHHHHTSS---CSEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHHHT--TTCCCC-CCHHHHHHCC-
T ss_pred CCCCcHHHHHHHHHHhcc---CCEEEEcCCCcEEEcCCHHHHHHHHHHHHHHHHHHHHh--cCCCCC-CCHHHHHHHHH
Confidence 5 6999999999999986 49999999999999999999999999999999999998 565544 45557666653
|
| >2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-42 Score=319.07 Aligned_cols=187 Identities=19% Similarity=0.268 Sum_probs=166.8
Q ss_pred HHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCCCC
Q 010820 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPH 107 (500)
Q Consensus 28 ~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~~~ 107 (500)
+++|++|++++|.|+++||+.+++||||+|+++ .|||||||.+|++++++||++||++|+++ + +|
T Consensus 3 ~~~r~~l~~~~r~l~~~Gl~~~~~GNiS~R~~~--------~~lItpsG~~~~~l~~~dlv~vd~~G~~~-~---~p--- 67 (200)
T 2fk5_A 3 ARLYAAFRQVGEDLFAQGLISATAGNFSVRTKG--------GFLITKSGVQKARLTPEDLLEVPLEGPIP-E---GA--- 67 (200)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCTTCCEEEEECSS--------EEEEEBTTCCGGGCCGGGEEEEESSSCCC-T---TB---
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC--------EEEEeCCCCCcccCCcccEEEEeCCCCCc-c---CC---
Confidence 678999999999999999999999999999943 89999999999999999999999999988 2 45
Q ss_pred CCCCCCCChHHHHHHHhhCCccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeee-eC-CCCchh
Q 010820 108 KPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPII-EN-TAYENE 185 (500)
Q Consensus 108 ~p~~~S~e~~~H~~iy~~~~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~-~~-~~~~~~ 185 (500)
|+|+.+|+.|||+.|++||+|+||+|+++||+.+. ++++..++... +.| .||++ || .+++.+
T Consensus 68 -----SsE~~~H~~iy~~pdv~aVvHtHs~~a~a~s~~~~---~l~~~~~~~~~-~~~-------~ip~~~~y~~~g~~e 131 (200)
T 2fk5_A 68 -----SVESVVHREVYRRTGARALVHAHPRVAVALSFHLS---RLRPLDLEGQH-YLK-------EVPVLAPKTVSATEE 131 (200)
T ss_dssp -----CTTHHHHHHHHHHSCCSEEEEECCHHHHHHHTTCS---EECCSSHHHHH-HTS-------CEEEECCSCCSSSHH
T ss_pred -----ChhHHHHHHHHhCCCCCEEEecCCHHHHHHHhcCC---CCCCccHHHHH-hCC-------CceEecCCCCCCcHH
Confidence 99999999999988899999999999999999974 45555555443 323 39999 88 568999
Q ss_pred HHHHHHHHHhhCCCccEEEEccccceeec------CCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 010820 186 LTDSLAKAIDAYPKATAVLVRNHGIYVWG------DSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPN 248 (500)
Q Consensus 186 l~~~v~~~l~~~~~~~~vll~nHG~~~~g------~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~ 248 (500)
+++.++++|+++ +++||+|||+++|| +|+++||.+++.+|++|++++.++++|.+.++..
T Consensus 132 la~~i~~~l~~~---~avll~nHG~~~~G~~~~~~~~~~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~ 197 (200)
T 2fk5_A 132 AALSVAEALREH---RACLLRGHGAFAVGLKEAPEEALLEAYGLMTTLEESAQILLYHRLWQGAGPALG 197 (200)
T ss_dssp HHHHHHHHHHHC---SEEEETTTEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCC-
T ss_pred HHHHHHHHhCcC---CEEEECCCCcEEEeCCCCCcCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccc
Confidence 999999999874 99999999999999 9999999999999999999999999998766643
|
| >1k0w_A L-ribulose 5 phosphate 4-epimerase; aldolase, isomerase; 2.10A {Escherichia coli} SCOP: c.74.1.1 PDB: 1jdi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-43 Score=330.62 Aligned_cols=203 Identities=20% Similarity=0.246 Sum_probs=168.0
Q ss_pred HHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCC-CCcccCCCCCCCC
Q 010820 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN-GTTLSSPSPKPYP 106 (500)
Q Consensus 28 ~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~-g~~~~g~~~~p~~ 106 (500)
+++|++|++++|.|+++||+.+++||||+|++++ +.|||||||+++++++++||++||++ |++++|. .+|
T Consensus 3 ~~~r~~l~~~~r~l~~~gl~~~~~GNiS~R~~~~------~~~~ItpsG~~~~~l~~~dlv~vd~~~G~~v~g~-~~p-- 73 (231)
T 1k0w_A 3 EDLKRQVLEANLALPKHNLVTLTWGNVSAVDRER------GVFVIKPSGVDYSIMTADDMVVVSIETGEVVEGA-KKP-- 73 (231)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCTTCCEEEEEETTT------TEEEECBSSCCTTTCCGGGCEEEETTTCCEEECS-SCB--
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCceEEEEeCCC------CEEEEeCCCCChhhCCHhHEEEEECCCCCCCCCC-CCC--
Confidence 6789999999999999999999999999999763 49999999999999999999999999 9999875 355
Q ss_pred CCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccc-hhhHhhhhcCCcccCcceeee--------
Q 010820 107 HKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRIT-HMEMIKGIKGHGYYDELVVPI-------- 176 (500)
Q Consensus 107 ~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~vp~-------- 176 (500)
|+|+.+|..|||+| |++||+|+||+++++||+.+. ++|.. .+ ....+.| .||+
T Consensus 74 ------Sse~~lH~~iy~~rpdv~aVvHtHs~~a~a~s~~~~---~l~~~~~~-~~~~~~g-------~vp~~~~~~~~~ 136 (231)
T 1k0w_A 74 ------SSDTPTHRLLYQAFPSIGGIVHTHSRHATIWAQAGQ---SIPATGTT-HANYFYG-------TIPCTRKMTDAE 136 (231)
T ss_dssp ------CTTHHHHHHHHHHCTTCCEEEECCCHHHHHHHHHTC---CBCCCSHH-HHTTCSS-------CBCBCCCCCHHH
T ss_pred ------ChhHHHHHHHHHhCCCCCEEEEeCcHHHHHHHHhCC---CCCCccHH-HHHHhCC-------Cceeeccccccc
Confidence 99999999999999 999999999999999999974 34433 33 2222333 3888
Q ss_pred --eeCC-CCchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcc
Q 010820 177 --IENT-AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTR 253 (500)
Q Consensus 177 --~~~~-~~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~ 253 (500)
+||. +++.+|++.+.+.+.+.++.++|||+|||+++||+|+++|+.+++.+|++|++++.++++|.+....++++++
T Consensus 137 i~~~y~~~g~~~La~~~~~~~~~~l~~~avll~nHG~~~~G~~~~eA~~~~~~lE~~a~~~~~a~~~g~~~~~l~~~~~~ 216 (231)
T 1k0w_A 137 INGEYEWETGNVIVETFEKQGIDAAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLN 216 (231)
T ss_dssp HHSSHHHHHHHHHHHHHHHTTCCTTTCCEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCCCHHHHH
T ss_pred cccCcCCCChHHHHHHHHHhhhccccCCEEEEcCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCHHHHH
Confidence 5663 4677777777654333234699999999999999999999999999999999999999999743444555665
Q ss_pred ccc
Q 010820 254 NFK 256 (500)
Q Consensus 254 ~~~ 256 (500)
+..
T Consensus 217 ~~~ 219 (231)
T 1k0w_A 217 KHY 219 (231)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
|
| >2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-41 Score=324.50 Aligned_cols=198 Identities=15% Similarity=0.127 Sum_probs=168.2
Q ss_pred HHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCCCC
Q 010820 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPH 107 (500)
Q Consensus 28 ~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~~~ 107 (500)
+++|++|++++|.|+++||+.+ +||||+|++++ .+.||||||| .+++|+++||++||++|+ ++|. .+|
T Consensus 39 ~~~r~~l~~~~r~l~~~Gl~~~-~GNiSvR~~~~-----~~~~lItpsg-~~~~l~~~dlv~vd~dG~-~~g~-~~p--- 106 (270)
T 2z7b_A 39 RKVFEELVTATKILLNEGIMDT-FGHISARDPED-----PASFFLAQKL-APSLITVDDIQRFNLDGE-TSDN-RPS--- 106 (270)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCS-SCEEEEECTTC-----TTEEEEECSS-CGGGCCGGGEEEEETTSC-CSCC-SCC---
T ss_pred HHHHHHHHHHHHHHHHCCCcCC-ceeEEEEecCC-----CCEEEEeCCC-ChhhCCcccEEEECCCCC-cCCC-CCC---
Confidence 7899999999999999999997 89999999863 2489999998 689999999999999999 5543 345
Q ss_pred CCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCC------
Q 010820 108 KPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT------ 180 (500)
Q Consensus 108 ~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~------ 180 (500)
|+|+.+|+.||++| |++||+|+||+|+++||+.+.. +++..++.. .+++ .||++||.
T Consensus 107 -----SsE~~lH~~Iy~~rpdv~aVvHtHs~~a~a~s~~~~~---l~~~~~~~~-~~g~-------~vpv~~y~~~~g~~ 170 (270)
T 2z7b_A 107 -----YLERYIHSEIYKTRPDVQCVLHTHSPAVLPYCFVDTP---LRPVTHMGA-FIGE-------SVPVYEIRDKHGDE 170 (270)
T ss_dssp -----CTTHHHHHHHHHHCTTCCEEEEECCTTTGGGGSSSSC---CCCCSGGGG-GGCS-------CCCEECTHHHHCSC
T ss_pred -----ChhHHHHHHHHHhCCCCeEEEeeCCHHHHHHHhcCCC---CCCccHHHH-HhCC-------CCceecccccCCcc
Confidence 99999999999999 9999999999999999998753 333233222 2322 39999863
Q ss_pred ----CCchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccccc
Q 010820 181 ----AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFK 256 (500)
Q Consensus 181 ----~~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~ 256 (500)
+++.++++.++++|++ .++|||+|||+++||+|+++||.+++.+|++|++++.++++|.+.. .++++++++.
T Consensus 171 ~~~~~~s~ela~~ia~~l~~---~~avLL~nHG~~~~G~tl~eA~~~~~~lE~~a~i~l~a~~~G~~~~-l~~e~~~~~~ 246 (270)
T 2z7b_A 171 TDLFGGSPDVCADIAESLGS---QTVVLMARHGVVNVGKSVREVVFRAFYLEQEAAALTAGLKIGNVKY-LSPGEIKTAG 246 (270)
T ss_dssp SCCCCCSHHHHHHHHHHHTT---SSEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCCCC-CCHHHHHHHT
T ss_pred cccccCCHHHHHHHHHHhcc---CCEEEEcCCceEEEeCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcC-CCHHHHHHHH
Confidence 3478999999999997 4899999999999999999999999999999999999999998754 4555777666
Q ss_pred c
Q 010820 257 L 257 (500)
Q Consensus 257 ~ 257 (500)
.
T Consensus 247 ~ 247 (270)
T 2z7b_A 247 K 247 (270)
T ss_dssp T
T ss_pred H
Confidence 3
|
| >1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-41 Score=317.22 Aligned_cols=202 Identities=16% Similarity=0.229 Sum_probs=164.0
Q ss_pred HHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCC--------------CCCccEEEEecCCCCcCCCC--CCCEEEEe
Q 010820 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSI--------------PKPQQLILMSPSGVQKERME--PEDMYVLS 91 (500)
Q Consensus 28 ~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~--------------~~~~~~~~itpsg~~~~~l~--~~di~~vd 91 (500)
+++|++|++++|+|+++||+.+++||||+|+++++. ..+.-.|||||||++|++++ ++||++|+
T Consensus 4 ~~~~~~l~~~~r~l~~~Gl~~~~~GNiS~R~~~~~~~~~~~~~~~~~~~~~~~~l~~lItpsG~~~~~l~~p~~dl~~v~ 83 (238)
T 1pvt_A 4 RETIREIQKVAYWLAIKGLSEANAGNISVRLDERPEGYEVKSVNEYGFDYDGPEMYLLITATGSRMREVYEDDSKICLLH 83 (238)
T ss_dssp HHHHHHHHHHHHHHHHTTSSBTTBEEEEEEESSCCSSCCCCEEEEEEEEECSCCEEEEEEBTTCCHHHHTTCGGGEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCcCCCCceEEEEcCCCcccccccccccccccccCcceEEEEcCCCCCHHhccCCcccEEEEE
Confidence 578999999999999999999999999999987410 00000799999999999999 79988887
Q ss_pred CC----CCcccCCCCCCCCCCCCCCCCChHHHHHHHh----hC-CccEEEecCchHHHHHHhhcCCCcc----cccchhh
Q 010820 92 GN----GTTLSSPSPKPYPHKPPKCSDCAPLFMKAYE----KR-DAGAVIHSHGIESCLVTMINPMSKE----FRITHME 158 (500)
Q Consensus 92 ~~----g~~~~g~~~~p~~~~p~~~S~e~~~H~~iy~----~~-~~~av~H~H~~~~~a~s~~~~~~~~----~~~~~~~ 158 (500)
+| |++++|.+ +| |+|+.+|+.||+ .| |++||+|+||+|+++||+... .++ ++....+
T Consensus 84 ~d~~~~g~~v~g~~-~P--------SsE~~~H~~iy~~~~~~rpd~~aVvHtHs~~~~a~s~~~~-l~~~~~~l~~~~~~ 153 (238)
T 1pvt_A 84 VLPGKHYEILHGNG-KP--------TSEFPTHLMIHAKFKEMNPEKKAIVHTHPLNLLTLMNLEE-FQELLPKMMKIHPE 153 (238)
T ss_dssp ECSEEEEEEEECSS-CB--------CTTHHHHHHHHHHHHHSCTTCCEEEEECCHHHHHHTTSGG-GTTTHHHHTTSSHH
T ss_pred ecCCCCcceeCCCC-CC--------ChHHHHHHHHHHhhhccCCCceEEEecCcHHHHHHHhccc-chhhhccccccchH
Confidence 77 56887653 55 999999999999 47 999999999999999999864 121 2222223
Q ss_pred HhhhhcCCcccCcceeeeeeC-CCCchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHH
Q 010820 159 MIKGIKGHGYYDELVVPIIEN-TAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKL 237 (500)
Q Consensus 159 ~~~~~~g~~~~~~~~vp~~~~-~~~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a 237 (500)
....+++ .||++|| .+++.++++.++++|++ .++|||+|||+++||+|+++||.+++.+|++|++++.+
T Consensus 154 ~~~~~~~-------~v~~~~y~~~g~~ela~~i~~~l~~---~~avll~nHG~~~~G~~~~eA~~~~~~lE~~a~~~~~a 223 (238)
T 1pvt_A 154 VLIFFPQ-------GISVVEFEKPGSVELGLKTVEKSEG---KDAVLWDKHGVVAFGKDVAEAYDRVEILEKAAEILLRV 223 (238)
T ss_dssp HHHHCSS-------CCEEECCCSTTCHHHHHHHHHHTSS---CSEEEETTSCEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCC-------CceEecCCCCCcHHHHHHHHHHhcc---CCEEEEcCCCceEecCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3323322 3999999 47899999999999986 49999999999999999999999999999999999999
Q ss_pred HhcCCCCCCCCC
Q 010820 238 HQLGLDWSTPNH 249 (500)
Q Consensus 238 ~~~g~~~~~~~~ 249 (500)
+++|.+....++
T Consensus 224 ~~~g~~~~~l~~ 235 (238)
T 1pvt_A 224 LSLGRNPTGVPE 235 (238)
T ss_dssp HTTTCSCCC---
T ss_pred HHcCCCCCCCCc
Confidence 999965444443
|
| >2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-41 Score=323.35 Aligned_cols=212 Identities=14% Similarity=0.171 Sum_probs=171.8
Q ss_pred cHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCC---------------------CCCccEEEEecCCCCcCCC--
Q 010820 26 AVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSI---------------------PKPQQLILMSPSGVQKERM-- 82 (500)
Q Consensus 26 ~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~---------------------~~~~~~~~itpsg~~~~~l-- 82 (500)
.++++|++|++++|.|+++||+.+++||||+|++++++ ...+++|||||||.+|++|
T Consensus 5 ~~~~~~~~l~~~~r~l~~~Gl~~~~~GNiS~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lItpSG~~~~~l~~ 84 (274)
T 2v9l_A 5 TYSWFVQGMIKATTDAWLKGWDERNGGNLTLRLDDADIAPYHDNFHQQPRYIPLSQPMPLLANTPFIVTGSGKFFRNVQL 84 (274)
T ss_dssp GGSHHHHHHHHHHHHHHHTTCCCTTCEEEEEECCHHHHGGGGGGSCSSCEEEECSSCCGGGTTCEEEEEBTTCCGGGTTT
T ss_pred hHHHHHHHHHHHHHHHHHCCCccCCCceEEEEcCCCCcccccccccccccccccccccccccCcEEEEeCCCCCHHHhcC
Confidence 35678999999999999999999999999999976200 0012389999999999999
Q ss_pred CCCC---EEEEeCCCC---cc---cCCCCCCCCCCCCCCCCChHHHHHHHhh-----C-CccEEEecCchHHHHHHhhcC
Q 010820 83 EPED---MYVLSGNGT---TL---SSPSPKPYPHKPPKCSDCAPLFMKAYEK-----R-DAGAVIHSHGIESCLVTMINP 147 (500)
Q Consensus 83 ~~~d---i~~vd~~g~---~~---~g~~~~p~~~~p~~~S~e~~~H~~iy~~-----~-~~~av~H~H~~~~~a~s~~~~ 147 (500)
+|+| |++||.+|+ ++ ++. .+| |+|+.+|+.||+. | |++||+|+||++++++|+.+.
T Consensus 85 ~p~d~~~iv~vd~dG~~~~~v~~~~~~-~~P--------SsE~~~H~~iy~~r~~~~rpd~~aVvHtHs~~~~a~s~~~~ 155 (274)
T 2v9l_A 85 DPAANLGIVKVDSDGAGYHILWGLTNE-AVP--------TSELPAHFLSHCERIKATNGKDRVIMHCHATNLIALTYVLE 155 (274)
T ss_dssp CHHHHEEEEEECTTSSEEEEEEECTTT-CCB--------CTTHHHHHHHHHHHHHHTTTCCCEEEEECCHHHHHHTTTSC
T ss_pred CHhhCCcEEEEeCCCCeeeeeeccCCC-CCC--------CHHHHHHHHHHHhcccccCCCCeEEEECCcHHHHHHHccCc
Confidence 8998 999999998 55 443 345 9999999999997 8 999999999999999999864
Q ss_pred CCc--ccccch----hhHhhhhcCCcccCcceeeeeeC-CCCchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHH
Q 010820 148 MSK--EFRITH----MEMIKGIKGHGYYDELVVPIIEN-TAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINA 220 (500)
Q Consensus 148 ~~~--~~~~~~----~~~~~~~~g~~~~~~~~vp~~~~-~~~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A 220 (500)
.+ .++... .+....+++ .||++|| .+++.++++.++++|+++ ++|||+|||+++||+|+++|
T Consensus 156 -l~~~~~~~~~~~~~~e~~~~~g~-------~v~v~~y~~~g~~ela~~i~~~l~~~---~avll~nHG~~~~G~~~~eA 224 (274)
T 2v9l_A 156 -NDTAVFTRQLWEGSTECLVVFPD-------GVGILPWMVPGTDAIGQATAQEMQKH---SLVLWPFHGVFGSGPTLDET 224 (274)
T ss_dssp -CCHHHHHHHHHHTSTTHHHHCTT-------CEEECCCCCSSSHHHHHHHHHHHTTC---SEEEETTTEEEEEESSHHHH
T ss_pred -cccccccchhhhcchHHHHHcCC-------ceeEecCCCCCCHHHHHHHHHHHccC---CEEEEcCCCceEecCCHHHH
Confidence 22 222111 122222321 3999999 579999999999999874 99999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccc
Q 010820 221 KTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL 257 (500)
Q Consensus 221 ~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~ 257 (500)
|.+++.+|++|++++.++++|.+....++++++++..
T Consensus 225 ~~~~e~lE~~a~i~~~a~~~g~~~~~l~~e~~~~~~~ 261 (274)
T 2v9l_A 225 FGLIDTAEKSAQVLVKVYSMGGMKQTISREELIALGK 261 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCSSCCCCC-HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 9999999999999999999997444456667776653
|
| >3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-38 Score=292.23 Aligned_cols=182 Identities=15% Similarity=0.122 Sum_probs=146.2
Q ss_pred HHHHHHHHHHHH-HcCCccccCCceeEEeCCCC-CCCCccEEEEecCCCCcCCCCCCCEEEEeCC---------------
Q 010820 31 RVLISELCRHFY-TLGWVSGTGGSITIKVHDDS-IPKPQQLILMSPSGVQKERMEPEDMYVLSGN--------------- 93 (500)
Q Consensus 31 ~~~l~~~~r~l~-~~gl~~~~~GniS~R~~~~~-~~~~~~~~~itpsg~~~~~l~~~di~~vd~~--------------- 93 (500)
.++++..++++. ++||+.+++||||+|+++.+ .+...+.|||||||++|++|+++||++||++
T Consensus 17 L~~~v~~~~~lg~~~~l~~~t~GNiSvR~~~~~~~g~~~~~~~ItpSG~~~~~l~~~dlv~vdl~~l~~~~~~~~~~~~~ 96 (222)
T 3m4r_A 17 IDEVVYGSRLIGSDPDLVLHGGGNTSVKTTERDHAGRIISVLRVKNSGSNLGTIDSRGFTGIRMDDALAAAKIDKMTDEA 96 (222)
T ss_dssp HHHHHHHHHHHHTCTTTCC-CCCEEEEEEEEECTTSCEEEEEEEEBTTSCGGGCCGGGEEEEEHHHHHHGGGCSCCCHHH
T ss_pred HHHHHHHHHHhcccCCeeecCCCeEEEEeCCCccccCcCCEEEEeCCCCChhhCCHHHeEEEchhhhccccccccccchh
Confidence 456788888885 68999999999999997511 0111248999999999999999999999998
Q ss_pred ------CCcccCCCCCCCCCCCCCCCCChHHHHHHHhhCCccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCc
Q 010820 94 ------GTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHG 167 (500)
Q Consensus 94 ------g~~~~g~~~~p~~~~p~~~S~e~~~H~~iy~~~~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~ 167 (500)
|++++|...+| |+|+.||..||+ +||+|+||+|+++||+.+. +++. +...+ |
T Consensus 97 ~~~~~~g~~v~~~~~~p--------SsE~~lH~~iy~----~aVvHtHs~~a~a~s~~~~---~l~~----~~~~~-g-- 154 (222)
T 3m4r_A 97 MVDYLKKSMVNPSEPSP--------SVETFLHAFLPY----KFVMHSHADAILSITNTDL---PSDQ----IAKIL-G-- 154 (222)
T ss_dssp HHHHHHHTBSSTTSCCB--------CTTHHHHHTSCS----SEEEEECCHHHHHHHTSSC---CHHH----HHHHH-C--
T ss_pred hccccCCccccCCCCCc--------chhHHHHHHHHh----CEEEEeCCHHHHHHHhCCC---cHHH----HHHHh-C--
Confidence 78887754445 999999999998 6999999999999999975 3332 12222 3
Q ss_pred ccCcceeeeeeCC-CCchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 010820 168 YYDELVVPIIENT-AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGL 242 (500)
Q Consensus 168 ~~~~~~vp~~~~~-~~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~ 242 (500)
.||++||. +++ ++++.++++|+++ .+++||+|||+++||+|+++||.+++.+|++|++++.++++|.
T Consensus 155 -----~v~~~~y~~~g~-ela~~i~~~l~~~--~~avlL~nHG~~~~G~t~~eA~~~~~~lE~~a~~~l~a~~~G~ 222 (222)
T 3m4r_A 155 -----NVVVLPYIPPGF-TLAKEVMNCFKKG--IDGIVLRKHGLLTFGDTGKEAYDRHINIVSRAENFIREKTDGK 222 (222)
T ss_dssp -----SEEEECCCCSSH-HHHHHHHHHCCTT--CSEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHHC------
T ss_pred -----CceecCCcCCcH-HHHHHHHHHHhcC--CCEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 29999985 576 9999999999864 4899999999999999999999999999999999999998874
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-26 Score=224.69 Aligned_cols=217 Identities=42% Similarity=0.722 Sum_probs=151.7
Q ss_pred CCceEEEEecCCcccccccccccchHhHHhhhhhhhccccCchhhHHHHHHHHHHHhh----------------------
Q 010820 282 LFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVED---------------------- 339 (500)
Q Consensus 282 ~~~k~vlFD~DGTL~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 339 (500)
|++|+|+||+||||+|+.++++..++.+.+.+..++...+...........++...+.
T Consensus 8 m~ikaviFDlDGTL~ds~~~~~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 87 (261)
T 1yns_A 8 AEVTVILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQAEEDAHLDGAVPIPAASGNGVDDLQ 87 (261)
T ss_dssp TTCCEEEECCBTTTBCHHHHHHTHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHTTTSTTCCCCCCCSCSSHHHHH
T ss_pred cCCCEEEEecCCCccchhhHhhcchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhccccccccccccchhhcccccccc
Confidence 3689999999999997766666666777777766655444333333333344433322
Q ss_pred -hhhhhcccc---ccCCCCCC-Chhh-HHHHHHhhcccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhcc
Q 010820 340 -DLKQGVAGA---VPIPPGDA-GKEE-GHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 413 (500)
Q Consensus 340 -~~~~~~~~~---~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~ 413 (500)
........+ +....... .... ...|...|........++||+.++|+.|+++|++++|+||++...++.+++++
T Consensus 88 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~ 167 (261)
T 1yns_A 88 QMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTAGRMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHS 167 (261)
T ss_dssp HHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHTTSCCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTB
T ss_pred cCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHhCCcccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhh
Confidence 011111110 10000000 0111 22255556555556789999999999999999999999999999999999876
Q ss_pred Ccccccccccccccc-cccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCC--CCC
Q 010820 414 NYGDLRKYLSGFFDT-AVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPE--NHG 490 (500)
Q Consensus 414 ~~~~l~~~f~~~~d~-~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~--~~~ 490 (500)
+..++..+|+.++.. .. .||+|++|+.++++++++ |++|+||||+.+|+.+|+++||.+|++.+++...... ..+
T Consensus 168 ~~~~l~~~fd~i~~~~~~-~KP~p~~~~~~~~~lg~~-p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~ 245 (261)
T 1yns_A 168 TEGDILELVDGHFDTKIG-HKVESESYRKIADSIGCS-TNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTY 245 (261)
T ss_dssp TTBCCGGGCSEEECGGGC-CTTCHHHHHHHHHHHTSC-GGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHH
T ss_pred cccChHhhccEEEecCCC-CCCCHHHHHHHHHHhCcC-cccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCC
Confidence 544688888877733 44 899999999999999998 9999999999999999999999999998865432211 123
Q ss_pred ceeeCCccCC
Q 010820 491 FKTINSFAEI 500 (500)
Q Consensus 491 ~~~i~~l~el 500 (500)
+++|+++.||
T Consensus 246 ~~~i~~l~el 255 (261)
T 1yns_A 246 YSLITSFSEL 255 (261)
T ss_dssp SCEESSGGGC
T ss_pred CEEECCHHHh
Confidence 8999999886
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-26 Score=221.93 Aligned_cols=215 Identities=33% Similarity=0.592 Sum_probs=139.8
Q ss_pred CCCceEEEEecCCcccccccccccchHhHHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCC-Chh
Q 010820 281 GLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDA-GKE 359 (500)
Q Consensus 281 ~~~~k~vlFD~DGTL~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 359 (500)
.+++|+|+|||||||+|+..+...++....+.+..++...+...........+.........+.+...++...... ...
T Consensus 28 ~~~ikaviFDlDGTLvDs~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~ 107 (253)
T 2g80_A 28 GDNYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQAHILELVAKDVKDPILKQ 107 (253)
T ss_dssp -CCCSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSCCTTSHHHHHHHTTCCCCHHHHHHHHHHHHHTTCCCHHHHH
T ss_pred CCCCcEEEEcCCCCcccccccchhhHHHHHHHHHHHHHHhcCcHHHHHHHHHhhhccHHHHHHHHHHHHhcccchHHHHH
Confidence 3458999999999999654433333334444444443332221111111111000000111111111111111110 111
Q ss_pred h-HHHHHHhhcccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcc--------cccccccccccccc
Q 010820 360 E-GHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYG--------DLRKYLSGFFDTAV 430 (500)
Q Consensus 360 ~-~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~--------~l~~~f~~~~d~~~ 430 (500)
. ...|...|.......+++||+.++|+. |++++|+||++...+..+++++..+ ++.++|+.+|+...
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~~~ 183 (253)
T 2g80_A 108 LQGYVWAHGYESGQIKAPVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINT 183 (253)
T ss_dssp HHHHHHHHHHHTTSCCBCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHH
T ss_pred HHHHHHHHHHHhCcccCCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceEEeeec
Confidence 1 345666666555567899999999988 8999999999999999999877322 57777888885533
Q ss_pred -cCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 431 -GNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 431 -~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
..||+|++|+.++++++++ |++|+||||+..|+++|+++||.++++.+++........++++|+||.||
T Consensus 184 ~g~KP~p~~~~~a~~~lg~~-p~~~l~vgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL 253 (253)
T 2g80_A 184 SGKKTETQSYANILRDIGAK-ASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 253 (253)
T ss_dssp HCCTTCHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred cCCCCCHHHHHHHHHHcCCC-cccEEEEcCCHHHHHHHHHcCCEEEEEcCCCCCCcccccCCCccCChhhC
Confidence 4699999999999999998 99999999999999999999999999998654332222358999999986
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=99.93 E-value=9.7e-26 Score=210.69 Aligned_cols=181 Identities=19% Similarity=0.186 Sum_probs=126.0
Q ss_pred ceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccC-CCCCCChhh
Q 010820 284 PRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPI-PPGDAGKEE 360 (500)
Q Consensus 284 ~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 360 (500)
+|+|+||+||||+ |+...+ +++.+...++..+.. +..+...+............. .........
T Consensus 1 IkAViFD~DGTL~------ds~~~~~~a~~~~~~~~g~~~~~-------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 67 (216)
T 3kbb_A 1 MEAVIFDMDGVLM------DTEPLYFEAYRRVAESYGKPYTE-------DLHRRIMGVPEREGLPILMEALEIKDSLENF 67 (216)
T ss_dssp CCEEEEESBTTTB------CCGGGHHHHHHHHHHHTTCCCCH-------HHHHHHTTSCHHHHHHHHHHHTTCCSCHHHH
T ss_pred CeEEEECCCCccc------CCHHHHHHHHHHHHHHcCCCCCH-------HHHHHHhccchhhhhhhhhhcccchhhHHHH
Confidence 5899999999999 443322 555565556654331 122222222211111111110 111111111
Q ss_pred HHHHHHhhccc-CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHH
Q 010820 361 GHIWRTGFESN-ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETP 437 (500)
Q Consensus 361 ~~~~~~~~~~~-~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~ 437 (500)
...+.+.+... .....++||+.++|+.|+++|++++++||++...+...++.+ ++.++|+.++ +.....||+|+
T Consensus 68 ~~~~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~---~l~~~fd~~~~~~~~~~~KP~p~ 144 (216)
T 3kbb_A 68 KKRVHEEKKRVFSELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRRL---DLEKYFDVMVFGDQVKNGKPDPE 144 (216)
T ss_dssp HHHHHHHHHHHHHHHCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT---TCGGGCSEEECGGGSSSCTTSTH
T ss_pred HHHHHHHHHHHHHHhcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhc---CCCccccccccccccCCCcccHH
Confidence 22222222222 223578999999999999999999999999999999999999 6788888777 45677899999
Q ss_pred HHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEE-EcCCC
Q 010820 438 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI-SIRPG 481 (500)
Q Consensus 438 ~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~-v~~~~ 481 (500)
+|+.+++++|++ |++|+||||+.+|+++|+++||++|+ +.++.
T Consensus 145 ~~~~a~~~lg~~-p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~ 188 (216)
T 3kbb_A 145 IYLLVLERLNVV-PEKVVVFEDSKSGVEAAKSAGIERIYGVVHSL 188 (216)
T ss_dssp HHHHHHHHHTCC-GGGEEEEECSHHHHHHHHHTTCCCEEEECCSS
T ss_pred HHHHHHHhhCCC-ccceEEEecCHHHHHHHHHcCCcEEEEecCCC
Confidence 999999999998 99999999999999999999999996 66653
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.93 E-value=6.4e-26 Score=211.50 Aligned_cols=198 Identities=15% Similarity=0.193 Sum_probs=137.7
Q ss_pred CCceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCChh
Q 010820 282 LFPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKE 359 (500)
Q Consensus 282 ~~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (500)
|++|+|+||+||||+ |+...+ +++.+...++..... .+.++...+......+...+ . .+....
T Consensus 2 M~~k~viFDlDGTL~------d~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~g~~~~~~~~~~~--~-~~~~~~ 66 (210)
T 2ah5_A 2 TSITAIFFDLDGTLV------DSSIGIHNAFTYTFKELGVPSPD------AKTIRGFMGPPLESSFATCL--S-KDQISE 66 (210)
T ss_dssp TTCCEEEECSBTTTE------ECHHHHHHHHHHHHHHHTCCCCC------HHHHHHTSSSCHHHHHHTTS--C-GGGHHH
T ss_pred CCCCEEEEcCCCcCc------cCHHHHHHHHHHHHHHcCCCCCC------HHHHHHHcCccHHHHHHHHc--C-HHHHHH
Confidence 468999999999999 543322 334444444433211 12233333333333222221 1 011111
Q ss_pred hHHHHHHhhccc-CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc-cccccCCCCHH
Q 010820 360 EGHIWRTGFESN-ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-DTAVGNKRETP 437 (500)
Q Consensus 360 ~~~~~~~~~~~~-~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~-d~~~~~KP~p~ 437 (500)
....+.+.+... .....++||+.++|+.|++ |++++|+||+....+...++++ ++..+|+.++ .. ...||+|+
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~---gl~~~f~~i~~~~-~~~Kp~p~ 141 (210)
T 2ah5_A 67 AVQIYRSYYKAKGIYEAQLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNL---EIHHFFDGIYGSS-PEAPHKAD 141 (210)
T ss_dssp HHHHHHHHHHHTGGGSCEECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHT---TCGGGCSEEEEEC-SSCCSHHH
T ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhc---CchhheeeeecCC-CCCCCChH
Confidence 123344444332 2335789999999999999 9999999999999999999999 6788888777 23 66799999
Q ss_pred HHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCC-CCCCC-CCCceeeCCccCC
Q 010820 438 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGN-GPLPE-NHGFKTINSFAEI 500 (500)
Q Consensus 438 ~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~-~~~~~-~~~~~~i~~l~el 500 (500)
+|+.+++++|++ |++|+||||+.+|+++|+++|+.+|++.++.. ..... ..++++++++.||
T Consensus 142 ~~~~~~~~lg~~-p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el 205 (210)
T 2ah5_A 142 VIHQALQTHQLA-PEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEV 205 (210)
T ss_dssp HHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHH
T ss_pred HHHHHHHHcCCC-cccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHH
Confidence 999999999998 99999999999999999999999999998743 22222 2348999998764
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.92 E-value=7e-25 Score=209.45 Aligned_cols=103 Identities=17% Similarity=0.170 Sum_probs=91.7
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
...++||+.++|+.|+++|++++++||+.. ...+++++ ++..+|+.++ +.....||+|++|+.+++++|++ |
T Consensus 93 ~~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~---gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~-p 166 (243)
T 4g9b_A 93 VNAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAAL---ELREFFTFCADASQLKNSKPDPEIFLAACAGLGVP-P 166 (243)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHT---TCGGGCSEECCGGGCSSCTTSTHHHHHHHHHHTSC-G
T ss_pred cccccccHHHHHHhhhcccccceecccccc--hhhhhhhh---hhccccccccccccccCCCCcHHHHHHHHHHcCCC-h
Confidence 346899999999999999999999999764 45667888 6788888777 45677899999999999999998 9
Q ss_pred CcEEEEeCCHhhHHHHHHcCCcEEEEcCCCC
Q 010820 452 SEILFVTDVYQEATAAKAAGLEVVISIRPGN 482 (500)
Q Consensus 452 ~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~ 482 (500)
++|+||||+.+|+++|+++||++|+|.++..
T Consensus 167 ~e~l~VgDs~~di~aA~~aG~~~I~V~~g~~ 197 (243)
T 4g9b_A 167 QACIGIEDAQAGIDAINASGMRSVGIGAGLT 197 (243)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEEESTTCC
T ss_pred HHEEEEcCCHHHHHHHHHcCCEEEEECCCCC
Confidence 9999999999999999999999999998744
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.5e-24 Score=204.70 Aligned_cols=214 Identities=11% Similarity=0.104 Sum_probs=143.4
Q ss_pred cccccccCCCCCCCCCCceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhh
Q 010820 267 TSAKAVTEGSDYGSGLFPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQG 344 (500)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (500)
.+....++.+.. +.+++|+|+||+||||+ ++...+ .+..+...++..... +.++...+......
T Consensus 14 ~~~~~~~~~m~~-~~~~ik~i~fDlDGTL~------d~~~~~~~~~~~~~~~~g~~~~~-------~~~~~~~g~~~~~~ 79 (250)
T 3l5k_A 14 GTENLYFQSMAA-PPQPVTHLIFDMDGLLL------DTERLYSVVFQEICNRYDKKYSW-------DVKSLVMGKKALEA 79 (250)
T ss_dssp ----CCCSEESS-CCCCCSEEEEETBTTTB------CHHHHHHHHHHHHHHHTTCCCCH-------HHHHHHTTCCHHHH
T ss_pred Cccceeeecccc-cccCCcEEEEcCCCCcC------CCHHHHHHHHHHHHHHhCCCCCH-------HHHHHhcCCCHHHH
Confidence 333444444433 44679999999999999 443222 333444444443221 12222222221111
Q ss_pred cccc---ccCCCCCCChhhHHHHHHhhcccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhc-cCcccccc
Q 010820 345 VAGA---VPIPPGDAGKEEGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN-SNYGDLRK 420 (500)
Q Consensus 345 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~-~~~~~l~~ 420 (500)
.... ++.. .........+...+........++||+.++|+.|+++|++++|+||+....+...+.. + ++..
T Consensus 80 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~---~l~~ 154 (250)
T 3l5k_A 80 AQIIIDVLQLP--MSKEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHK---EFFS 154 (250)
T ss_dssp HHHHHHHHTCS--SCHHHHHHHHHHHHHHHGGGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCH---HHHT
T ss_pred HHHHHHHhCCC--CCHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhcc---CHHh
Confidence 1111 1111 1111113334444443334567999999999999999999999999998888877754 4 5677
Q ss_pred cccccc--c--ccccCCCCHHHHHHHHHHcCCCCC--CcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceee
Q 010820 421 YLSGFF--D--TAVGNKRETPSYVEITNSLGVDKP--SEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTI 494 (500)
Q Consensus 421 ~f~~~~--d--~~~~~KP~p~~~~~~l~~l~v~~p--~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i 494 (500)
+|+.++ + .....||+|++|+.++++++++ | ++|+||||+.+|+++|+++|+.++++.++...+.....+++++
T Consensus 155 ~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~-~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~ 233 (250)
T 3l5k_A 155 LFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPP-PAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVL 233 (250)
T ss_dssp TSSCEECTTCTTCCSCTTSTHHHHHHHHTSSSC-CCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEEC
T ss_pred heeeEEecchhhccCCCCChHHHHHHHHHcCCC-CCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEee
Confidence 787766 4 5567899999999999999998 7 9999999999999999999999999999865544455569999
Q ss_pred CCccCC
Q 010820 495 NSFAEI 500 (500)
Q Consensus 495 ~~l~el 500 (500)
+++.||
T Consensus 234 ~sl~el 239 (250)
T 3l5k_A 234 NSLQDF 239 (250)
T ss_dssp SCGGGC
T ss_pred cCHHHh
Confidence 999886
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.4e-24 Score=205.51 Aligned_cols=117 Identities=13% Similarity=0.118 Sum_probs=99.9
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
...++||+.++|+.|+++|+++++.|+... +...++++ ++.++|+.++ +.....||+|++|+.++++++++ |
T Consensus 114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~~--~~~~L~~~---gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~-p 187 (250)
T 4gib_A 114 SNDILPGIESLLIDVKSNNIKIGLSSASKN--AINVLNHL---GISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNVN-P 187 (250)
T ss_dssp GGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHH---TCGGGCSEECCGGGCCSCTTSSHHHHHHHHHHTCC-G
T ss_pred ccccchhHHHHHHHHHhcccccccccccch--hhhHhhhc---ccccccceeecccccCCCCCcHHHHHHHHHHhCCC-h
Confidence 457899999999999999999999887653 45678888 7788888887 45677899999999999999998 9
Q ss_pred CcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 452 SEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 452 ~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
++|+||||+.+|+++|+++||.+|+|.+... ...++++|+|+.||
T Consensus 188 ~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~----~~~ad~vi~~l~eL 232 (250)
T 4gib_A 188 QNCIGIEDASAGIDAINSANMFSVGVGNYEN----LKKANLVVDSTNQL 232 (250)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEEESCTTT----TTTSSEEESSGGGC
T ss_pred HHeEEECCCHHHHHHHHHcCCEEEEECChhH----hccCCEEECChHhC
Confidence 9999999999999999999999999964322 12358999999886
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-24 Score=202.53 Aligned_cols=134 Identities=19% Similarity=0.232 Sum_probs=111.3
Q ss_pred HHHHHhhccc-CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHH
Q 010820 362 HIWRTGFESN-ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPS 438 (500)
Q Consensus 362 ~~~~~~~~~~-~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~ 438 (500)
..+.+.|... .....++||+.++|+.|+++|++++|+||+....+...++.+ ++..+|+.++ +.....||+|++
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~---gl~~~f~~i~~~~~~~~~Kp~~~~ 144 (222)
T 2nyv_A 68 EVFRKHYLENPVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDIL---NLSGYFDLIVGGDTFGEKKPSPTP 144 (222)
T ss_dssp HHHHHHHHHCSCSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT---TCGGGCSEEECTTSSCTTCCTTHH
T ss_pred HHHHHHHHHhccccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc---CCHHHheEEEecCcCCCCCCChHH
Confidence 3344444433 345689999999999999999999999999999999999999 5677787776 345668999999
Q ss_pred HHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 439 YVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 439 ~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
|..++++++++ |++|+||||+.+|+.+|+++|+.++++.++...... ..++++++++.||
T Consensus 145 ~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el 204 (222)
T 2nyv_A 145 VLKTLEILGEE-PEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDL 204 (222)
T ss_dssp HHHHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHH
T ss_pred HHHHHHHhCCC-chhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHH
Confidence 99999999998 999999999999999999999999999987443332 4458999998764
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.5e-24 Score=203.65 Aligned_cols=204 Identities=19% Similarity=0.234 Sum_probs=141.5
Q ss_pred CCCCceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCC
Q 010820 280 SGLFPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAG 357 (500)
Q Consensus 280 ~~~~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (500)
..+++|+|+||+||||+ ++...+ .+..+...++.... .+.+....+..........+........
T Consensus 15 ~~~~ik~i~fDlDGTL~------d~~~~~~~~~~~~~~~~g~~~~-------~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 81 (237)
T 4ex6_A 15 PAAADRGVILDLDGTLA------DTPAAIATITAEVLAAMGTAVS-------RGAILSTVGRPLPASLAGLLGVPVEDPR 81 (237)
T ss_dssp --CCCEEEEECSBTTTB------CCHHHHHHHHHHHHHHTTCCCC-------HHHHHHHTTSCHHHHHHHHHTSCTTSHH
T ss_pred CcccCCEEEEcCCCCCc------CCHHHHHHHHHHHHHHcCCCCC-------HHHHHHhcCccHHHHHHHHhCCCCCHHH
Confidence 45678999999999999 443222 33444444442211 1223333333333333333322211111
Q ss_pred -hhhHHHHHHhhcccC---cccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--ccccc
Q 010820 358 -KEEGHIWRTGFESNE---LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVG 431 (500)
Q Consensus 358 -~~~~~~~~~~~~~~~---~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~ 431 (500)
......+...+.... ....++||+.++|+.|+++|++++|+||+....+...++.+ ++..+|+.++ +....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~ 158 (237)
T 4ex6_A 82 VAEATEEYGRRFGAHVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELT---GLDTRLTVIAGDDSVER 158 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHH---TGGGTCSEEECTTTSSS
T ss_pred HHHHHHHHHHHHHHhcccccCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHc---CchhheeeEEeCCCCCC
Confidence 111233333343332 44679999999999999999999999999999999999998 6677787776 44667
Q ss_pred CCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCC-CCCCC-CCceeeCCccCC
Q 010820 432 NKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNG-PLPEN-HGFKTINSFAEI 500 (500)
Q Consensus 432 ~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~-~~~~~-~~~~~i~~l~el 500 (500)
.||+|++|+.++++++++ |++|+||||+.+|+.+|+++|+.+++|.++... ..... .++++++++.||
T Consensus 159 ~kp~~~~~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el 228 (237)
T 4ex6_A 159 GKPHPDMALHVARGLGIP-PERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAA 228 (237)
T ss_dssp CTTSSHHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHH
T ss_pred CCCCHHHHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHH
Confidence 899999999999999998 999999999999999999999999999988543 22222 458999998764
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.5e-23 Score=192.54 Aligned_cols=201 Identities=17% Similarity=0.144 Sum_probs=137.7
Q ss_pred CCceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCC-CCCCh
Q 010820 282 LFPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPP-GDAGK 358 (500)
Q Consensus 282 ~~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 358 (500)
|++|+|+||+||||+ ++...+ .+..+...++...... .++...+............... .....
T Consensus 3 ~m~k~i~fDlDGTL~------~~~~~~~~~~~~~~~~~g~~~~~~-------~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 69 (214)
T 3e58_A 3 AMVEAIIFDMDGVLF------DTEKYYYDRRASFLGQKGISIDHL-------PPSFFIGGNTKQVWENILRDEYDKWDVS 69 (214)
T ss_dssp -CCCEEEEESBTTTB------CCHHHHHHHHHHHHHHTTCCCTTS-------CHHHHTTSCGGGCHHHHHGGGGGGSCHH
T ss_pred ccccEEEEcCCCCcc------ccHHHHHHHHHHHHHHcCCCCCHH-------HHHHHcCCCHHHHHHHHHHhhcCCCCHH
Confidence 458999999999999 433222 3333333344432211 1222222222221111111000 00111
Q ss_pred hhHHHHHHhhcccCc--ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCC
Q 010820 359 EEGHIWRTGFESNEL--EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKR 434 (500)
Q Consensus 359 ~~~~~~~~~~~~~~~--~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP 434 (500)
.....+...+..... ...++||+.++|+.|+++|++++++||+....+...++.+ ++..+|+.++ +.....||
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp 146 (214)
T 3e58_A 70 TLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEEN---RLQGFFDIVLSGEEFKESKP 146 (214)
T ss_dssp HHHHHHHHHHHHSCCCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT---TCGGGCSEEEEGGGCSSCTT
T ss_pred HHHHHHHHHHHHhhcccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHc---CcHhheeeEeecccccCCCC
Confidence 113334444443322 2479999999999999999999999999999999999999 6677787776 44567899
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 435 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
+|++|..++++++++ |++|+||||+.+|+.+|+++|+.+++++++..... ...++++++++.||
T Consensus 147 ~~~~~~~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~-~~~a~~~~~~~~el 210 (214)
T 3e58_A 147 NPEIYLTALKQLNVQ-ASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMD-QSAAKGLLDSLTDV 210 (214)
T ss_dssp SSHHHHHHHHHHTCC-GGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCC-CTTSSEEESSGGGG
T ss_pred ChHHHHHHHHHcCCC-hHHeEEEeccHhhHHHHHHCCCEEEEECCCCccch-hccHHHHHHHHHHH
Confidence 999999999999998 99999999999999999999999999998644332 24459999999875
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=99.90 E-value=6.8e-24 Score=201.88 Aligned_cols=134 Identities=10% Similarity=0.178 Sum_probs=108.7
Q ss_pred HHHHHhhccc-CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHH
Q 010820 362 HIWRTGFESN-ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPS 438 (500)
Q Consensus 362 ~~~~~~~~~~-~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~ 438 (500)
..+.+.|... .....++||+.++|+.|+++|++++|+||++...+...++++ ++. +|+.++ +.....||+|++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~---~l~-~f~~~~~~~~~~~~Kp~p~~ 170 (240)
T 2hi0_A 95 EVFKPYYADHCQIKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEEL---FPG-SFDFALGEKSGIRRKPAPDM 170 (240)
T ss_dssp HHHHHHHHHTSSSSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHH---STT-TCSEEEEECTTSCCTTSSHH
T ss_pred HHHHHHHHHhhhhcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc---CCc-ceeEEEecCCCCCCCCCHHH
Confidence 3344444432 334679999999999999999999999999999999999988 556 777666 345678999999
Q ss_pred HHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCC-CCCC-CCCceeeCCccCC
Q 010820 439 YVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNG-PLPE-NHGFKTINSFAEI 500 (500)
Q Consensus 439 ~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~-~~~~-~~~~~~i~~l~el 500 (500)
|..++++++++ |++|+||||+.+|+++|+++|+.+|++.++... .... ..++++++++.||
T Consensus 171 ~~~~~~~l~~~-~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~~~~el 233 (240)
T 2hi0_A 171 TSECVKVLGVP-RDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKL 233 (240)
T ss_dssp HHHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEECSHHHH
T ss_pred HHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEECCHHHH
Confidence 99999999998 999999999999999999999999999887432 2221 2348888888663
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-23 Score=200.22 Aligned_cols=124 Identities=20% Similarity=0.231 Sum_probs=106.4
Q ss_pred cccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCC
Q 010820 373 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDK 450 (500)
Q Consensus 373 ~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~ 450 (500)
....++||+.++|+.|+++|++++|+||+....+..+++.+ ++..+|+.++ +.....||+|++|..++++++++
T Consensus 111 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~---gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~- 186 (243)
T 2hsz_A 111 NISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAF---GIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLY- 186 (243)
T ss_dssp SSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT---TCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCC-
T ss_pred ccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHc---CchheEEEEEecccCCCCCcCHHHHHHHHHHhCcC-
Confidence 34679999999999999999999999999999999999999 5667777666 33566899999999999999998
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCC-CCCC-CCCCceeeCCccCC
Q 010820 451 PSEILFVTDVYQEATAAKAAGLEVVISIRPGN-GPLP-ENHGFKTINSFAEI 500 (500)
Q Consensus 451 p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~-~~~~-~~~~~~~i~~l~el 500 (500)
|++|+||||+.+|+.+|+++|+.++++.++.. .... ...++++++++.||
T Consensus 187 ~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el 238 (243)
T 2hsz_A 187 PKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADI 238 (243)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGG
T ss_pred hhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHH
Confidence 99999999999999999999999999998743 2222 23348999999875
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.5e-22 Score=191.03 Aligned_cols=121 Identities=17% Similarity=0.181 Sum_probs=106.2
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
...++|++.++|+.|+ +|++++++||+....+...++.+ ++..+|+.++ +.....||+|.+|+.++++++++ |
T Consensus 105 ~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~-~ 179 (240)
T 3qnm_A 105 KSGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSA---GVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSE-L 179 (240)
T ss_dssp CCCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHH---TCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHTTCC-G
T ss_pred cCCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHc---ChHhhceeEEEeccCCCCCCCHHHHHHHHHHcCCC-c
Confidence 4679999999999999 99999999999999999999988 6677787776 44667899999999999999998 9
Q ss_pred CcEEEEeCCH-hhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 452 SEILFVTDVY-QEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 452 ~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
++|+||||+. +|+++|+++|+.+++++++.. ......++++++++.|+
T Consensus 180 ~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~-~~~~~~~d~vi~sl~e~ 228 (240)
T 3qnm_A 180 RESLMIGDSWEADITGAHGVGMHQAFYNVTER-TVFPFQPTYHIHSLKEL 228 (240)
T ss_dssp GGEEEEESCTTTTHHHHHHTTCEEEEECCSCC-CCCSSCCSEEESSTHHH
T ss_pred ccEEEECCCchHhHHHHHHcCCeEEEEcCCCC-CCcCCCCceEECCHHHH
Confidence 9999999996 999999999999999998865 23334459999999874
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-22 Score=188.95 Aligned_cols=198 Identities=14% Similarity=0.128 Sum_probs=137.0
Q ss_pred CCceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCChh
Q 010820 282 LFPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKE 359 (500)
Q Consensus 282 ~~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (500)
|++|+|+||+||||+ ++...+ .+..+...++.... .+.++...+.........+ +... .....
T Consensus 2 M~~k~iifDlDGTL~------d~~~~~~~~~~~~~~~~g~~~~-------~~~~~~~~g~~~~~~~~~~-~~~~-~~~~~ 66 (209)
T 2hdo_A 2 MTYQALMFDIDGTLT------NSQPAYTTVMREVLATYGKPFS-------PAQAQKTFPMAAEQAMTEL-GIAA-SEFDH 66 (209)
T ss_dssp CCCSEEEECSBTTTE------ECHHHHHHHHHHHHHTTTCCCC-------HHHHHHHTTSCHHHHHHHT-TCCG-GGHHH
T ss_pred CcccEEEEcCCCCCc------CCHHHHHHHHHHHHHHhCCCCC-------HHHHHHHcCCcHHHHHHHc-CCCH-HHHHH
Confidence 457999999999999 443322 33333333443211 1223333443333333321 2111 11111
Q ss_pred hHHHHHHhhcccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHH
Q 010820 360 EGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETP 437 (500)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~ 437 (500)
....+...+........++||+.++|+.|+++ ++++|+||+....+...++.+ ++..+|+.++ +.....||+|+
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~KP~~~ 142 (209)
T 2hdo_A 67 FQAQYEDVMASHYDQIELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSY---PFMMRMAVTISADDTPKRKPDPL 142 (209)
T ss_dssp HHHHHHHHHTTCGGGCEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTS---GGGGGEEEEECGGGSSCCTTSSH
T ss_pred HHHHHHHHHhhhcccCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHc---ChHhhccEEEecCcCCCCCCCcH
Confidence 11222222222223467999999999999999 999999999999999999999 6677777766 33566899999
Q ss_pred HHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCC-CCCCCCCCceeeCCccCC
Q 010820 438 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGN-GPLPENHGFKTINSFAEI 500 (500)
Q Consensus 438 ~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~-~~~~~~~~~~~i~~l~el 500 (500)
+|..++++++++ |++|+||||+.+|+.+|+++|+.+++++++.. .+.... ++++++++.||
T Consensus 143 ~~~~~~~~~~~~-~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~~~~el 204 (209)
T 2hdo_A 143 PLLTALEKVNVA-PQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQKPLDI 204 (209)
T ss_dssp HHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEESSGGGG
T ss_pred HHHHHHHHcCCC-cccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeCCHHHH
Confidence 999999999998 99999999999999999999999999998743 333333 68999998875
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.89 E-value=6.8e-23 Score=192.75 Aligned_cols=202 Identities=13% Similarity=0.088 Sum_probs=137.6
Q ss_pred CCceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccc---cCCCCCC
Q 010820 282 LFPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAV---PIPPGDA 356 (500)
Q Consensus 282 ~~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 356 (500)
+++|+|+||+||||+ ++...+ .+..+....+..... ..++...+..........+ +......
T Consensus 4 ~~~k~i~fDlDGTL~------~~~~~~~~~~~~~~~~~g~~~~~-------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 70 (233)
T 3s6j_A 4 RPQTSFIFDLDGTLT------DSVYQNVAAWKEALDAENIPLAM-------WRIHRKIGMSGGLMLKSLSRETGMSITDE 70 (233)
T ss_dssp -CCCEEEECCBTTTE------ECHHHHHHHHHHHHHHTTCCCCH-------HHHHHHTTSCHHHHHHHHHHC----CCHH
T ss_pred CcCcEEEEcCCCccc------cChHHHHHHHHHHHHHcCCCCCH-------HHHHHHcCCcHHHHHHHHHHhcCCCCCHH
Confidence 358999999999999 443222 333333444443221 1122223322222111111 1111100
Q ss_pred -ChhhHHHHHHhhcccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCC
Q 010820 357 -GKEEGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNK 433 (500)
Q Consensus 357 -~~~~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~K 433 (500)
.......+...+........++||+.++|+.|+++|++++++||+....+...++.+ ++..+|+.++ +.....|
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~k 147 (233)
T 3s6j_A 71 QAERLSEKHAQAYERLQHQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKAL---KLDINKINIVTRDDVSYGK 147 (233)
T ss_dssp HHHHHHHHHHHHHHHTGGGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTT---TCCTTSSCEECGGGSSCCT
T ss_pred HHHHHHHHHHHHHHHhhccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhc---chhhhhheeeccccCCCCC
Confidence 011123333444433445689999999999999999999999999999999999999 6677777766 4456789
Q ss_pred CCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCC-CCCCCCC-CceeeCCccCC
Q 010820 434 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGN-GPLPENH-GFKTINSFAEI 500 (500)
Q Consensus 434 P~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~-~~~~~~~-~~~~i~~l~el 500 (500)
|++++|+.++++++++ |++|+||||+.+|+.+|+++|+.++++.++.. ....... ++++++++.||
T Consensus 148 p~~~~~~~~~~~l~~~-~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el 215 (233)
T 3s6j_A 148 PDPDLFLAAAKKIGAP-IDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDL 215 (233)
T ss_dssp TSTHHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHH
T ss_pred CChHHHHHHHHHhCCC-HHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHH
Confidence 9999999999999998 99999999999999999999999999998733 2222232 48999998764
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=4.2e-24 Score=200.41 Aligned_cols=123 Identities=14% Similarity=0.139 Sum_probs=106.9
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
...++||+.++|+.|+++|++++++||+....+...++.+ ++..+|+.++ +.....||+|++|..++++++++ |
T Consensus 84 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~-~ 159 (226)
T 3mc1_A 84 ENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHF---KLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIK-S 159 (226)
T ss_dssp SCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHT---TCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCC-G
T ss_pred cCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh---CCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcC-c
Confidence 4679999999999999999999999999999999999999 6677787776 44667899999999999999998 9
Q ss_pred CcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCC--CCCCceeeCCccCC
Q 010820 452 SEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLP--ENHGFKTINSFAEI 500 (500)
Q Consensus 452 ~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~--~~~~~~~i~~l~el 500 (500)
++|+||||+.+|+.+|+++|+.++++.++...... ...++++++++.||
T Consensus 160 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el 210 (226)
T 3mc1_A 160 DDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDEL 210 (226)
T ss_dssp GGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHH
T ss_pred ccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHH
Confidence 99999999999999999999999999987543222 23458999998764
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-21 Score=184.34 Aligned_cols=121 Identities=15% Similarity=0.201 Sum_probs=106.9
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcC-CCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLG-VDKP 451 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~-v~~p 451 (500)
..++||+.++|+.|+++ ++++++||+....+...++.+ ++..+|+.++ +.....||+|++|+.+++++| ++ |
T Consensus 102 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~-~ 176 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDS---GLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFS-A 176 (238)
T ss_dssp CCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHT---TCGGGCSEEEEGGGTTSCTTCHHHHHHHHHTSTTCC-G
T ss_pred CCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHc---ChHhhhheEEEecccCCCCCChHHHHHHHHHcCCCC-h
Confidence 57999999999999999 999999999999999999998 6677787776 446678999999999999999 98 9
Q ss_pred CcEEEEeCCH-hhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 452 SEILFVTDVY-QEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 452 ~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
++|+||||+. +|+++|+++|+.+++++++.........++++++++.||
T Consensus 177 ~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el 226 (238)
T 3ed5_A 177 EHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEEL 226 (238)
T ss_dssp GGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGH
T ss_pred hHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHH
Confidence 9999999998 999999999999999998754444444559999999875
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2.6e-23 Score=199.75 Aligned_cols=124 Identities=19% Similarity=0.197 Sum_probs=106.7
Q ss_pred cccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccc-cc--cccc-cCCCCHHHHHHHHHHcCC
Q 010820 373 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSG-FF--DTAV-GNKRETPSYVEITNSLGV 448 (500)
Q Consensus 373 ~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~-~~--d~~~-~~KP~p~~~~~~l~~l~v 448 (500)
....++||+.++|+.|+++|++++|+||+....+...++.+ ++..+|+. ++ +... ..||+|++|..+++++++
T Consensus 107 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~---~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi 183 (259)
T 4eek_A 107 TGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVA---GLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGI 183 (259)
T ss_dssp TTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHT---TCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHTTC
T ss_pred ccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhc---ChHhhccceEEeHhhcCcCCCCChHHHHHHHHHcCC
Confidence 45679999999999999999999999999999999999999 66778887 66 4456 789999999999999999
Q ss_pred CCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCC-----CCCC-CCCceeeCCccCC
Q 010820 449 DKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNG-----PLPE-NHGFKTINSFAEI 500 (500)
Q Consensus 449 ~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~-----~~~~-~~~~~~i~~l~el 500 (500)
+ |++|+||||+.+|+++|+++|+.++++.++... +... ..++++++++.||
T Consensus 184 ~-~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el 240 (259)
T 4eek_A 184 L-PERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAEL 240 (259)
T ss_dssp C-GGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHH
T ss_pred C-HHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCCHHHH
Confidence 8 999999999999999999999999999987432 1111 2248999998764
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=6e-22 Score=187.97 Aligned_cols=123 Identities=29% Similarity=0.335 Sum_probs=107.8
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
...++||+.++|+.|+++|++++|+||+....+...++.+ ++..+|+.++ +.....||+|++|..++++++++ |
T Consensus 103 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~-~ 178 (240)
T 2no4_A 103 ELSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKAS---KLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVN-P 178 (240)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT---TCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCC-G
T ss_pred cCCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhc---CcHHHcCEEEEccccCCCCCCHHHHHHHHHHcCCC-c
Confidence 3578999999999999999999999999999999999998 6677787776 44567899999999999999998 9
Q ss_pred CcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCC-ceeeCCccCC
Q 010820 452 SEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHG-FKTINSFAEI 500 (500)
Q Consensus 452 ~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~-~~~i~~l~el 500 (500)
++|+||||+.+|+.+|+++|+.++++.++...+.....+ +++++++.||
T Consensus 179 ~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~el 228 (240)
T 2no4_A 179 NEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVNSLSEL 228 (240)
T ss_dssp GGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEESSGGGH
T ss_pred ccEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceeeCCHHHH
Confidence 999999999999999999999999999875533334456 8999998874
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=99.88 E-value=5.3e-22 Score=191.44 Aligned_cols=122 Identities=20% Similarity=0.309 Sum_probs=104.1
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
...++||+.++|+.|++ +++++|+||++...+...++.+ ++..+|+.++ +.....||+|++|..++++++++ |
T Consensus 119 ~~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~---gl~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~-~ 193 (260)
T 2gfh_A 119 HMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEAC---ACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQ-P 193 (260)
T ss_dssp TCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHH---TCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCC-G
T ss_pred cCCCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhc---CHHhhhheEEecCCCCCCCCCHHHHHHHHHHcCCC-h
Confidence 35799999999999997 5999999999999999999998 6778888766 44567899999999999999998 9
Q ss_pred CcEEEEeCC-HhhHHHHHHcCC-cEEEEcCCCCCCCC-CCCCceeeCCccCC
Q 010820 452 SEILFVTDV-YQEATAAKAAGL-EVVISIRPGNGPLP-ENHGFKTINSFAEI 500 (500)
Q Consensus 452 ~~~l~VGDs-~~Di~aA~~aG~-~~i~v~~~~~~~~~-~~~~~~~i~~l~el 500 (500)
++|+||||+ .+|+++|+++|| .++++.++...... ...++++++++.||
T Consensus 194 ~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~~~el 245 (260)
T 2gfh_A 194 GDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLEL 245 (260)
T ss_dssp GGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGH
T ss_pred hhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECCHHHH
Confidence 999999996 899999999999 79999876443222 23348999998874
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.3e-22 Score=188.36 Aligned_cols=123 Identities=17% Similarity=0.210 Sum_probs=108.0
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
...++||+.++|+.|+++|++++|+||+....+...++.+ ++..+|+.++ +.....||+|++|..++++++++ |
T Consensus 97 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~-~ 172 (233)
T 3umb_A 97 CLSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSA---GMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVP-A 172 (233)
T ss_dssp SCEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTT---TCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSC-G
T ss_pred cCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHC---CcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCCC-c
Confidence 4678999999999999999999999999999999999999 6677787766 44667899999999999999998 9
Q ss_pred CcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCC-CCCCCceeeCCccCC
Q 010820 452 SEILFVTDVYQEATAAKAAGLEVVISIRPGNGPL-PENHGFKTINSFAEI 500 (500)
Q Consensus 452 ~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~-~~~~~~~~i~~l~el 500 (500)
++|+||||+.+|+.+|+++|+.++++.++++... ....++++++++.||
T Consensus 173 ~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el 222 (233)
T 3umb_A 173 AQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDL 222 (233)
T ss_dssp GGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHH
T ss_pred ccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHH
Confidence 9999999999999999999999999999855433 333459999998764
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.6e-22 Score=194.03 Aligned_cols=122 Identities=16% Similarity=0.071 Sum_probs=105.0
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccc-ccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY-LSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~-f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
..++||+.++|+.|+++|++++|+||+....+...++.+ ++..+ |+.++ +.....||+|.+|..+++++|++ |
T Consensus 110 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~-~ 185 (277)
T 3iru_A 110 SQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAA---KEQGYTPASTVFATDVVRGRPFPDMALKVALELEVG-H 185 (277)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH---HHTTCCCSEEECGGGSSSCTTSSHHHHHHHHHHTCS-C
T ss_pred CccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhc---CcccCCCceEecHHhcCCCCCCHHHHHHHHHHcCCC-C
Confidence 578999999999999999999999999999999999888 55666 66665 44567899999999999999998 8
Q ss_pred -CcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCC------------------------CCCC-CCCceeeCCccCC
Q 010820 452 -SEILFVTDVYQEATAAKAAGLEVVISIRPGNG------------------------PLPE-NHGFKTINSFAEI 500 (500)
Q Consensus 452 -~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~------------------------~~~~-~~~~~~i~~l~el 500 (500)
++|+||||+.+|+++|+++|+.+++|.++... ..+. ..++++++++.||
T Consensus 186 ~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el 260 (277)
T 3iru_A 186 VNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHYVIDSVADL 260 (277)
T ss_dssp GGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSEEESSGGGT
T ss_pred CccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCEEecCHHHH
Confidence 99999999999999999999999999998542 1112 2249999999886
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=99.88 E-value=6.3e-23 Score=195.15 Aligned_cols=122 Identities=14% Similarity=0.083 Sum_probs=102.0
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccc--cccc--cccccCCCCHHHHHHHHHHcCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL--SGFF--DTAVGNKRETPSYVEITNSLGVD 449 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f--~~~~--d~~~~~KP~p~~~~~~l~~l~v~ 449 (500)
...++||+.++|+.|+++|++++++||+....+...++. + +..+| +.++ +.....||+|++|..++++++++
T Consensus 107 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~---l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~ 182 (243)
T 3qxg_A 107 EAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-N---FPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLK 182 (243)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-H---STTTCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCC
T ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-h---HHHhcCcceEEeHHhCCCCCCChHHHHHHHHHcCCC
Confidence 467999999999999999999999999998887777765 4 45667 5555 44667899999999999999998
Q ss_pred CCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCC--CCCCceeeCCccCC
Q 010820 450 KPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLP--ENHGFKTINSFAEI 500 (500)
Q Consensus 450 ~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~--~~~~~~~i~~l~el 500 (500)
|++|+||||+.+|+.+|+++|+.++++.++...... ...++++++++.||
T Consensus 183 -~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el 234 (243)
T 3qxg_A 183 -ADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTL 234 (243)
T ss_dssp -GGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHHH
T ss_pred -HHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHHH
Confidence 999999999999999999999999999987443221 12358999998764
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.88 E-value=8.4e-22 Score=185.02 Aligned_cols=124 Identities=29% Similarity=0.277 Sum_probs=108.2
Q ss_pred cccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCC
Q 010820 373 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDK 450 (500)
Q Consensus 373 ~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~ 450 (500)
....++||+.++|+.|+++|++++++||+....+...++.+ ++..+|+.++ +.....||+|.+|..++++++++
T Consensus 93 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~- 168 (230)
T 3um9_A 93 LSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNS---GLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLG- 168 (230)
T ss_dssp TSCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH---TCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCC-
T ss_pred hcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHC---CChhhcceeEehhhcccCCCChHHHHHHHHHhCCC-
Confidence 34678999999999999999999999999999999999988 6677787776 44567899999999999999998
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCC-CCCCceeeCCccCC
Q 010820 451 PSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLP-ENHGFKTINSFAEI 500 (500)
Q Consensus 451 p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~-~~~~~~~i~~l~el 500 (500)
|++|+||||+.+|+.+|+++|+.+++++++++.... ...++++++++.||
T Consensus 169 ~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el 219 (230)
T 3um9_A 169 ESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVL 219 (230)
T ss_dssp GGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHH
T ss_pred cccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHH
Confidence 999999999999999999999999999998554333 33459999998764
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-21 Score=185.04 Aligned_cols=120 Identities=16% Similarity=0.177 Sum_probs=102.4
Q ss_pred CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCC
Q 010820 372 ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVD 449 (500)
Q Consensus 372 ~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~ 449 (500)
.....++||+.++|+.|+++|++++|+||+....+...++.+ ++..+|+.++ +.....||+|++|..++++++++
T Consensus 99 ~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~---gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~ 175 (231)
T 3kzx_A 99 SDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHK---NLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIE 175 (231)
T ss_dssp CCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHT---TCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCC
T ss_pred cccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHC---CchhheeeEEcccccCCCCCChHHHHHHHHHcCCC
Confidence 345689999999999999999999999999999999999999 6677787776 44667899999999999999998
Q ss_pred CCC-cEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 450 KPS-EILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 450 ~p~-~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
|+ +|+||||+.+|+++|+++|+.+|++.++.. ..++++++++.||
T Consensus 176 -~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~-----~~~~~~~~~~~el 221 (231)
T 3kzx_A 176 -PSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI-----IKDILSFKNFYDI 221 (231)
T ss_dssp -CSTTEEEEESSHHHHHHHHHTTCEEEEECC----------CCEEESSHHHH
T ss_pred -cccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC-----CCCceeeCCHHHH
Confidence 98 999999999999999999999999965433 2237888887764
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.7e-22 Score=189.66 Aligned_cols=122 Identities=16% Similarity=0.170 Sum_probs=104.2
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
..++||+.++|+.|+++|++++|+||+....+...++.+ ++..+|+.++ +.....||+|++|..++++++++ |+
T Consensus 93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~-~~ 168 (241)
T 2hoq_A 93 LREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRL---ELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVK-PE 168 (241)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHT---TCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCC-GG
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHc---CcHhhccEEEEeCCCCCCCCCHHHHHHHHHHcCCC-cc
Confidence 468999999999999999999999999999999999998 6677787766 44567899999999999999998 99
Q ss_pred cEEEEeCCH-hhHHHHHHcCCcEEEEcCCCCCCCCC---CCCceeeCCccCC
Q 010820 453 EILFVTDVY-QEATAAKAAGLEVVISIRPGNGPLPE---NHGFKTINSFAEI 500 (500)
Q Consensus 453 ~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~~---~~~~~~i~~l~el 500 (500)
+|+||||+. +|+.+|+++|+.++++.++....... ..++++++++.||
T Consensus 169 ~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~~~~el 220 (241)
T 2hoq_A 169 EALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESL 220 (241)
T ss_dssp GEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEESSTTHH
T ss_pred cEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEECCHHHH
Confidence 999999998 99999999999999997654322111 1348899998764
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.5e-22 Score=192.07 Aligned_cols=121 Identities=18% Similarity=0.215 Sum_probs=103.5
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
..++||+.++|+.|+++|++++|+||+... +...++.+ ++..+|+.++ +.....||+|++|..++++++++ |+
T Consensus 105 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~---gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~-~~ 179 (263)
T 3k1z_A 105 WQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGL---GLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHME-PV 179 (263)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHT---TCGGGCSCEEEHHHHSSCTTSHHHHHHHHHHHTCC-GG
T ss_pred ceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhC---CcHHhhhEEEeecccCCCCCCHHHHHHHHHHcCCC-HH
Confidence 579999999999999999999999998874 67888888 6677888777 34567899999999999999998 99
Q ss_pred cEEEEeCCH-hhHHHHHHcCCcEEEEcCCCCCCC---CCCCCceeeCCccCC
Q 010820 453 EILFVTDVY-QEATAAKAAGLEVVISIRPGNGPL---PENHGFKTINSFAEI 500 (500)
Q Consensus 453 ~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~---~~~~~~~~i~~l~el 500 (500)
+|+||||+. +|+.+|+++|+.+++++++..... ....++++++++.||
T Consensus 180 ~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el 231 (263)
T 3k1z_A 180 VAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHL 231 (263)
T ss_dssp GEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGH
T ss_pred HEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHH
Confidence 999999997 999999999999999998853322 112358999999874
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-21 Score=186.81 Aligned_cols=120 Identities=14% Similarity=0.118 Sum_probs=100.5
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
...++|++.++|+.|++. ++++++||+....+...++.++ +. |+.++ +.....||+|++|+.++++++++ |
T Consensus 118 ~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g---~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~-~ 190 (254)
T 3umc_A 118 RLRPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAG---LP--WDMLLCADLFGHYKPDPQVYLGACRLLDLP-P 190 (254)
T ss_dssp SCEECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHT---CC--CSEECCHHHHTCCTTSHHHHHHHHHHHTCC-G
T ss_pred cCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcC---CC--cceEEeecccccCCCCHHHHHHHHHHcCCC-h
Confidence 457899999999999985 9999999999999999998884 32 55555 44567899999999999999998 9
Q ss_pred CcEEEEeCCHhhHHHHHHcCCcEEEEcC----CC-CCCCC--CCCCceeeCCccCC
Q 010820 452 SEILFVTDVYQEATAAKAAGLEVVISIR----PG-NGPLP--ENHGFKTINSFAEI 500 (500)
Q Consensus 452 ~~~l~VGDs~~Di~aA~~aG~~~i~v~~----~~-~~~~~--~~~~~~~i~~l~el 500 (500)
++|+||||+.+|+++|+++|+.++++++ +. ..+.. ...++++++|+.||
T Consensus 191 ~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el 246 (254)
T 3umc_A 191 QEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDL 246 (254)
T ss_dssp GGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHH
T ss_pred HHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHH
Confidence 9999999999999999999999999994 32 22233 23349999998774
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.5e-22 Score=191.96 Aligned_cols=124 Identities=13% Similarity=0.155 Sum_probs=107.7
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
...++||+.++|+.|+++|++++|+||+....+...++.+ ++..+|+.++ +.....||+|++|..+++++++++|
T Consensus 108 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~ 184 (240)
T 3sd7_A 108 ENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYF---DIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDK 184 (240)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHT---TCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCCG
T ss_pred ccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHc---CcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCCC
Confidence 4679999999999999999999999999999999999999 6677888777 4467789999999999999999439
Q ss_pred CcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCC--CCCceeeCCccCC
Q 010820 452 SEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPE--NHGFKTINSFAEI 500 (500)
Q Consensus 452 ~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~--~~~~~~i~~l~el 500 (500)
++|++|||+.+|+++|+++|+.++++.++....... ..++++++++.||
T Consensus 185 ~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el 235 (240)
T 3sd7_A 185 DKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESI 235 (240)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTH
T ss_pred CcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHH
Confidence 999999999999999999999999999874432222 3458999999875
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.3e-22 Score=188.46 Aligned_cols=116 Identities=14% Similarity=0.127 Sum_probs=90.9
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
..++||+.++|+.|+++|++++|+||+.. +...++.+ ++..+|+.++ +.....||+|++|..++++++++ |+
T Consensus 91 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~---gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~-~~ 164 (233)
T 3nas_A 91 EDLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRL---AIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVS-PA 164 (233)
T ss_dssp GGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHT---TCTTTCSEECCC---------CCHHHHHHHHHTSC-GG
T ss_pred CCcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHc---CcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcCCC-HH
Confidence 35899999999999999999999999865 77778888 6677787776 44567899999999999999998 99
Q ss_pred cEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 453 EILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 453 ~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
+|+||||+.+|+.+|+++|+.++++++... .. .++++++++.||
T Consensus 165 ~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~---~~-~ad~v~~s~~el 208 (233)
T 3nas_A 165 DCAAIEDAEAGISAIKSAGMFAVGVGQGQP---ML-GADLVVRQTSDL 208 (233)
T ss_dssp GEEEEECSHHHHHHHHHTTCEEEECC-----------CSEECSSGGGC
T ss_pred HEEEEeCCHHHHHHHHHcCCEEEEECCccc---cc-cCCEEeCChHhC
Confidence 999999999999999999999999976422 12 458999999875
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.87 E-value=3e-21 Score=181.94 Aligned_cols=123 Identities=25% Similarity=0.295 Sum_probs=106.4
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
...++||+.++|+.|+++|++++|+||+....+...++.+ ++..+|+.++ +.....||+|++|..++++++++ |
T Consensus 93 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~-~ 168 (232)
T 1zrn_A 93 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHA---GLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLD-R 168 (232)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT---TCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSC-G
T ss_pred cCCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhc---ChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCC-c
Confidence 3578999999999999999999999999999999999988 6677787766 44567899999999999999998 9
Q ss_pred CcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCC-CCCCCceeeCCccCC
Q 010820 452 SEILFVTDVYQEATAAKAAGLEVVISIRPGNGPL-PENHGFKTINSFAEI 500 (500)
Q Consensus 452 ~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~-~~~~~~~~i~~l~el 500 (500)
++|+||||+.+|+.+|+++|+.++++++++.... ....++++++++.||
T Consensus 169 ~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el 218 (232)
T 1zrn_A 169 SAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAV 218 (232)
T ss_dssp GGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHH
T ss_pred ccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHHH
Confidence 9999999999999999999999999998754322 233458999988764
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.8e-22 Score=188.83 Aligned_cols=122 Identities=15% Similarity=0.100 Sum_probs=99.9
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccc--cccc--cccccCCCCHHHHHHHHHHcCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL--SGFF--DTAVGNKRETPSYVEITNSLGVD 449 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f--~~~~--d~~~~~KP~p~~~~~~l~~l~v~ 449 (500)
...++||+.++|+.|+++|++++|+||+....+...++. + +..+| +.++ +.....||+|++|+.++++++++
T Consensus 106 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~---l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~ 181 (247)
T 3dv9_A 106 KAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-N---FPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFK 181 (247)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-H---STTTCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCC
T ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-h---HHHhcCCCeEEecccCCCCCCCCHHHHHHHHHcCCC
Confidence 467999999999999999999999999998888888776 4 35567 5555 44567899999999999999998
Q ss_pred CCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCC-C-CCCCceeeCCccCC
Q 010820 450 KPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPL-P-ENHGFKTINSFAEI 500 (500)
Q Consensus 450 ~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~-~-~~~~~~~i~~l~el 500 (500)
|++|+||||+.+|+.+|+++|+.++++.++..... + ...++++++++.||
T Consensus 182 -~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el 233 (247)
T 3dv9_A 182 -PNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDF 233 (247)
T ss_dssp -GGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHH
T ss_pred -hhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHH
Confidence 99999999999999999999999999998744322 2 22458999998764
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=9e-22 Score=182.21 Aligned_cols=122 Identities=15% Similarity=0.167 Sum_probs=105.4
Q ss_pred cccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccc--cccc-cccccCCCCHHHHHHHHHHcCCC
Q 010820 373 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL--SGFF-DTAVGNKRETPSYVEITNSLGVD 449 (500)
Q Consensus 373 ~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f--~~~~-d~~~~~KP~p~~~~~~l~~l~v~ 449 (500)
....++||+.++|+.|+++|++++|+||+....+...++.+ ++..+| +.++ ......||+|++|..++++++++
T Consensus 67 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~---~l~~~f~~~~i~~~~~~~~kp~~~~~~~~~~~~g~~ 143 (205)
T 3m9l_A 67 QGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAI---GLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVS 143 (205)
T ss_dssp EEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT---TCGGGSCGGGEECTTTSCCTTSSHHHHHHHHHTTCC
T ss_pred hcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHc---CchhhcCcceEEeCCCCCCCCCHHHHHHHHHHcCCC
Confidence 34579999999999999999999999999999999999999 667777 5555 22467899999999999999998
Q ss_pred CCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 450 KPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 450 ~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
|++|+||||+.+|+++|+++|+.+|++.++.. .....++++++++.||
T Consensus 144 -~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~--~~~~~ad~v~~~~~el 191 (205)
T 3m9l_A 144 -PSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDN--PWPELTDWHARDCAQL 191 (205)
T ss_dssp -GGGEEEEESSHHHHHHHHHHTCEEEECSSSSC--SCGGGCSEECSSHHHH
T ss_pred -HHHEEEECCCHHHHHHHHHcCCEEEEEeCCCC--cccccCCEEeCCHHHH
Confidence 99999999999999999999999999988753 2223358999998764
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.86 E-value=8.5e-22 Score=180.64 Aligned_cols=122 Identities=19% Similarity=0.196 Sum_probs=104.2
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcH---HHHHHHHhccCccccccccccccc--cc----ccCCCCHHHHHHHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSR---LAQRLIFGNSNYGDLRKYLSGFFD--TA----VGNKRETPSYVEITNS 445 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~---~~~~~~l~~~~~~~l~~~f~~~~d--~~----~~~KP~p~~~~~~l~~ 445 (500)
..++||+.++|+.|+++|++++|+||+.. ..+...++.+ ++..+|+.++. .. ...||+|++|+.++++
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~---gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~ 109 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNF---GIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNA 109 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHT---TCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHH
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhc---CchhheEEEEEccccccccCCCCcCHHHHHHHHHH
Confidence 46999999999999999999999999987 8899999999 67778887772 22 5679999999999999
Q ss_pred cCCCCCCcEEEEeCC-HhhHHHHHHcCCcEEEEcCCCCC---CCCCC-CCceeeC--CccCC
Q 010820 446 LGVDKPSEILFVTDV-YQEATAAKAAGLEVVISIRPGNG---PLPEN-HGFKTIN--SFAEI 500 (500)
Q Consensus 446 l~v~~p~~~l~VGDs-~~Di~aA~~aG~~~i~v~~~~~~---~~~~~-~~~~~i~--~l~el 500 (500)
++++ |++|+||||+ .+|+.+|+++||.++++.++... +.... .++++++ ++.+|
T Consensus 110 ~~~~-~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l 170 (189)
T 3ib6_A 110 LQID-KTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADV 170 (189)
T ss_dssp HTCC-GGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGH
T ss_pred cCCC-cccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhH
Confidence 9998 9999999999 69999999999999999987542 22222 4488998 88764
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.6e-21 Score=182.38 Aligned_cols=121 Identities=19% Similarity=0.168 Sum_probs=100.8
Q ss_pred cccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHH---HHHcC
Q 010820 373 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEI---TNSLG 447 (500)
Q Consensus 373 ~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~---l~~l~ 447 (500)
....++||+.++|+.|++ |++++++||+....+...++.+ ..+|+.++ +.....||+|++|..+ +++++
T Consensus 96 ~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l-----~~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lg 169 (240)
T 3smv_A 96 KNWPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKL-----GVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAG 169 (240)
T ss_dssp GGCCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTT-----CSCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTT
T ss_pred hcCCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhc-----CCccCEEEEccccCCCCCCHHHHHHHHHHHHhcC
Confidence 345799999999999999 8999999999999999888775 45677666 4467789999999999 89999
Q ss_pred CCCCCcEEEEeCCH-hhHHHHHHcCCcEEEEcCC------CCCC--CCCCCCceeeCCccCC
Q 010820 448 VDKPSEILFVTDVY-QEATAAKAAGLEVVISIRP------GNGP--LPENHGFKTINSFAEI 500 (500)
Q Consensus 448 v~~p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~------~~~~--~~~~~~~~~i~~l~el 500 (500)
++ |++|+||||+. +|+++|+++|+.+++++++ ++.. .....++++++|+.||
T Consensus 170 i~-~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el 230 (240)
T 3smv_A 170 IE-KKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEM 230 (240)
T ss_dssp CC-GGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHH
T ss_pred CC-chhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHH
Confidence 98 99999999996 9999999999999999975 2222 2223459999998764
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.9e-21 Score=181.19 Aligned_cols=121 Identities=20% Similarity=0.269 Sum_probs=101.6
Q ss_pred cccccCCCHHHHHHHHHhCC-cEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCC
Q 010820 373 LEGEVFDDVPEALEKWHSLG-TKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 373 ~~~~~~pgv~~~L~~L~~~G-~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
....++||+.++|+.|+++| ++++++||+....+...++.+ ++.++|+.++ ...||+|++|..+++++|++ |
T Consensus 102 ~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~---~~~~~f~~~~---~~~kpk~~~~~~~~~~lgi~-~ 174 (234)
T 3ddh_A 102 MPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERS---GLSPYFDHIE---VMSDKTEKEYLRLLSILQIA-P 174 (234)
T ss_dssp CCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHH---TCGGGCSEEE---EESCCSHHHHHHHHHHHTCC-G
T ss_pred ccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHh---CcHhhhheee---ecCCCCHHHHHHHHHHhCCC-c
Confidence 34679999999999999999 999999999999999999888 5566676655 34799999999999999998 9
Q ss_pred CcEEEEeCCH-hhHHHHHHcCCcEEEEcCC----CCCCCCCCCC-ceeeCCccCC
Q 010820 452 SEILFVTDVY-QEATAAKAAGLEVVISIRP----GNGPLPENHG-FKTINSFAEI 500 (500)
Q Consensus 452 ~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~----~~~~~~~~~~-~~~i~~l~el 500 (500)
++|+||||+. +|+.+|+++|+.++++..+ .........+ +++++|+.||
T Consensus 175 ~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el 229 (234)
T 3ddh_A 175 SELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDL 229 (234)
T ss_dssp GGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGH
T ss_pred ceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHH
Confidence 9999999997 9999999999999999543 3322333444 9999999875
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.8e-21 Score=180.83 Aligned_cols=121 Identities=22% Similarity=0.282 Sum_probs=104.5
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCc---HHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCC
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGS---RLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDK 450 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~---~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~ 450 (500)
.++|++.++|+.|+++|++++++||+. ...+...++.+ ++..+|+..+ +.....||+|++|..+++++|++
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~- 174 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERF---GLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVK- 174 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHT---TCGGGCSEEEEHHHHTCCTTCHHHHHHHHHHTTCC-
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhC---CcHHHhhhheeccccCCCCCCHHHHHHHHHHcCCC-
Confidence 469999999999999999999999999 99999999888 6677777766 34567899999999999999998
Q ss_pred CCcEEEEeCCH-hhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 451 PSEILFVTDVY-QEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 451 p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
|++|++|||+. +|+++|+++|+.++++++++........++++++++.||
T Consensus 175 ~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el 225 (235)
T 2om6_A 175 PEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANL 225 (235)
T ss_dssp GGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGH
T ss_pred ccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHH
Confidence 99999999999 999999999999999998753333233358899998874
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-21 Score=181.67 Aligned_cols=123 Identities=16% Similarity=0.186 Sum_probs=104.6
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
...++|++.++|+.|+++|++++++||+....+...++.+ ++..+|+..+ +.....||++.+|..++++++++ |
T Consensus 87 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~-~ 162 (225)
T 3d6j_A 87 NTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNH---MPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKAC-P 162 (225)
T ss_dssp GCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTS---SCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCC-G
T ss_pred cCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHc---CchhheeeeeehhhcCCCCCChHHHHHHHHHhCCC-h
Confidence 3568999999999999999999999999999999999888 5566676655 33456799999999999999998 9
Q ss_pred CcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCC-CCCCC-CceeeCCccCC
Q 010820 452 SEILFVTDVYQEATAAKAAGLEVVISIRPGNGP-LPENH-GFKTINSFAEI 500 (500)
Q Consensus 452 ~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~-~~~~~-~~~~i~~l~el 500 (500)
+++++|||+.+|+.+|+.+|+.++++.++.+.. ..... ++++++++.||
T Consensus 163 ~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el 213 (225)
T 3d6j_A 163 EEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQL 213 (225)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESSGGGG
T ss_pred HHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECCHHHH
Confidence 999999999999999999999999999874432 23333 58999998875
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.86 E-value=9.6e-22 Score=181.38 Aligned_cols=100 Identities=9% Similarity=-0.004 Sum_probs=85.7
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
..++||+.++|+.|+++|++++|+||.........++ .+|+.++ +.....||+|++|.++++++++.+++
T Consensus 35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~--------~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~ 106 (196)
T 2oda_A 35 AQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA--------PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLE 106 (196)
T ss_dssp GSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT--------TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSCST
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC--------ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCCCc
Confidence 3589999999999999999999999999887754442 2356555 44567899999999999999997348
Q ss_pred cEEEEeCCHhhHHHHHHcCCcEEEEcCCCC
Q 010820 453 EILFVTDVYQEATAAKAAGLEVVISIRPGN 482 (500)
Q Consensus 453 ~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~ 482 (500)
+|+||||+.+|+++|+++||.+|++.++..
T Consensus 107 ~~v~VGDs~~Di~aA~~aG~~~i~v~~g~~ 136 (196)
T 2oda_A 107 GCVLISGDPRLLQSGLNAGLWTIGLASCGP 136 (196)
T ss_dssp TCEEEESCHHHHHHHHHHTCEEEEESSSST
T ss_pred cEEEEeCCHHHHHHHHHCCCEEEEEccCCc
Confidence 999999999999999999999999998754
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-21 Score=183.94 Aligned_cols=122 Identities=15% Similarity=0.169 Sum_probs=106.5
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
...++|++.++|+.|+++ ++++++||+....+...++.+ ++..+|+.++ +.....||+|++|..++++++++ |
T Consensus 98 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~---~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~-~ 172 (234)
T 3u26_A 98 YGELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDAL---GIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVK-G 172 (234)
T ss_dssp HCCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHT---TCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCC-G
T ss_pred hCCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHc---CcHHHcceeEeccccCCCCcCHHHHHHHHHHcCCC-c
Confidence 356899999999999999 999999999999999999998 6677787776 34567899999999999999998 9
Q ss_pred CcEEEEeCCH-hhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 452 SEILFVTDVY-QEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 452 ~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
++|++|||+. +|+++|+++|+.++++++++........++++++++.||
T Consensus 173 ~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~~~~~el 222 (234)
T 3u26_A 173 EEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREV 222 (234)
T ss_dssp GGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEESSTHHH
T ss_pred hhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEeeCCHHHH
Confidence 9999999998 999999999999999999855444333559999998764
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.86 E-value=6.6e-21 Score=182.10 Aligned_cols=120 Identities=11% Similarity=0.083 Sum_probs=99.2
Q ss_pred cccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 373 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 373 ~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
....++||+.++|+.|+ +|++++|+||+....+...++.+ ++..+|+.++. ..||+|++|..++++++++ |+
T Consensus 109 ~~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~---~l~~~f~~i~~---~~kp~~~~~~~~~~~l~~~-~~ 180 (251)
T 2pke_A 109 HPVEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQS---GLSDLFPRIEV---VSEKDPQTYARVLSEFDLP-AE 180 (251)
T ss_dssp CCCCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHH---SGGGTCCCEEE---ESCCSHHHHHHHHHHHTCC-GG
T ss_pred ccCCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHc---CcHHhCceeee---eCCCCHHHHHHHHHHhCcC-ch
Confidence 34578999999999999 89999999999999999999888 56667765552 4699999999999999998 99
Q ss_pred cEEEEeCCH-hhHHHHHHcCCcEEEEcCCCCCCC-----C-CCCCce-eeCCccCC
Q 010820 453 EILFVTDVY-QEATAAKAAGLEVVISIRPGNGPL-----P-ENHGFK-TINSFAEI 500 (500)
Q Consensus 453 ~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~-----~-~~~~~~-~i~~l~el 500 (500)
+|++|||+. +|+.+|+++|+.++++.++..... . ...+++ +|+++.||
T Consensus 181 ~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~el 236 (251)
T 2pke_A 181 RFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSGW 236 (251)
T ss_dssp GEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECSSGGGH
T ss_pred hEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeCCHHHH
Confidence 999999999 999999999999999987643111 1 223477 89999874
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.6e-20 Score=182.81 Aligned_cols=123 Identities=11% Similarity=0.149 Sum_probs=101.1
Q ss_pred ccccCCCHHHHHHHHHhCCc--EEEEEcCCcHHHHHHHHhccCcccccccccccc--cc----cccCCCCHHHHHHHHHH
Q 010820 374 EGEVFDDVPEALEKWHSLGT--KVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DT----AVGNKRETPSYVEITNS 445 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~--~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~----~~~~KP~p~~~~~~l~~ 445 (500)
...++||+.++|+.|+++|+ +++|+||+....+...++.+ ++..+|+.++ +. ....||+|++|+.++++
T Consensus 140 ~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~---gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~ 216 (282)
T 3nuq_A 140 ILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLL---GIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKE 216 (282)
T ss_dssp TCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHH---TCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHH
T ss_pred ccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhC---CcccccceEEEeccCCCcccCCCcCHHHHHHHHHH
Confidence 36789999999999999999 99999999999999999998 5667777666 21 24579999999999999
Q ss_pred cCCCCC-CcEEEEeCCHhhHHHHHHcCC-cEEEEcCCCCCCCC--CCCCceeeCCccCC
Q 010820 446 LGVDKP-SEILFVTDVYQEATAAKAAGL-EVVISIRPGNGPLP--ENHGFKTINSFAEI 500 (500)
Q Consensus 446 l~v~~p-~~~l~VGDs~~Di~aA~~aG~-~~i~v~~~~~~~~~--~~~~~~~i~~l~el 500 (500)
+|++ | ++|+||||+.+|+.+|+++|+ .++++.++...... ...++++++++.||
T Consensus 217 lgi~-~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el 274 (282)
T 3nuq_A 217 SGLA-RYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILEL 274 (282)
T ss_dssp HTCC-CGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGG
T ss_pred cCCC-CcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHH
Confidence 9998 8 999999999999999999999 55666655443322 22348999999875
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.9e-21 Score=179.93 Aligned_cols=119 Identities=16% Similarity=0.196 Sum_probs=101.3
Q ss_pred CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCC
Q 010820 372 ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVD 449 (500)
Q Consensus 372 ~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~ 449 (500)
.....++||+.++|+.|+++ ++++++||+... ++.+ ++..+|+.++ +.....||+|++|..++++++++
T Consensus 101 ~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 171 (230)
T 3vay_A 101 RHQVQIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRL---GLADYFAFALCAEDLGIGKPDPAPFLEALRRAKVD 171 (230)
T ss_dssp HTCCCBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGS---TTGGGCSEEEEHHHHTCCTTSHHHHHHHHHHHTCC
T ss_pred hccCccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhc---CcHHHeeeeEEccccCCCCcCHHHHHHHHHHhCCC
Confidence 34567999999999999998 999999998865 5666 6677788777 34667899999999999999998
Q ss_pred CCCcEEEEeCCH-hhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 450 KPSEILFVTDVY-QEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 450 ~p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
|++|+||||+. +|+.+|+++|+.++++.+++........++++++++.||
T Consensus 172 -~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el 222 (230)
T 3vay_A 172 -ASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQL 222 (230)
T ss_dssp -GGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGH
T ss_pred -chheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHH
Confidence 99999999998 999999999999999999865443334459999999875
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.7e-20 Score=179.75 Aligned_cols=121 Identities=21% Similarity=0.230 Sum_probs=104.0
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
...++||+.++|+.|+ |++++|+||+....+...++.+ ++..+|+.++ +.....||+|++|..++++++++ |
T Consensus 91 ~~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~---gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~-~ 164 (253)
T 1qq5_A 91 RLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANA---GLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVT-P 164 (253)
T ss_dssp SCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHT---TCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCC-G
T ss_pred cCCCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHC---CchhhccEEEEccccCCCCCCHHHHHHHHHHcCCC-H
Confidence 3578999999999998 9999999999999999999998 6677787776 44567899999999999999998 9
Q ss_pred CcEEEEeCCHhhHHHHHHcCCcEEEEcC-----------------------CCC-CCCCCCCCceeeCCccCC
Q 010820 452 SEILFVTDVYQEATAAKAAGLEVVISIR-----------------------PGN-GPLPENHGFKTINSFAEI 500 (500)
Q Consensus 452 ~~~l~VGDs~~Di~aA~~aG~~~i~v~~-----------------------~~~-~~~~~~~~~~~i~~l~el 500 (500)
++|+||||+.+|+++|+++|+.++++++ +.. .+.....++++++|+.||
T Consensus 165 ~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el 237 (253)
T 1qq5_A 165 AEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDL 237 (253)
T ss_dssp GGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGH
T ss_pred HHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeeeCCHHHH
Confidence 9999999999999999999999999998 322 222233459999999874
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-20 Score=179.03 Aligned_cols=121 Identities=15% Similarity=0.140 Sum_probs=100.8
Q ss_pred cccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCC
Q 010820 373 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDK 450 (500)
Q Consensus 373 ~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~ 450 (500)
....++|++.++|+.|++. ++++++||+....+...++.++ +. |+.++ +.....||+|.+|..+++++|++
T Consensus 113 ~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~---~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~- 185 (254)
T 3umg_A 113 HVLTPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAG---IP--WDVIIGSDINRKYKPDPQAYLRTAQVLGLH- 185 (254)
T ss_dssp GSCCBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHT---CC--CSCCCCHHHHTCCTTSHHHHHHHHHHTTCC-
T ss_pred hhCcCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCC---CC--eeEEEEcCcCCCCCCCHHHHHHHHHHcCCC-
Confidence 3457899999999999997 9999999999999999998884 32 55555 34567899999999999999998
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCcEEEEcC----CC-CCCCC--CCCCceeeCCccCC
Q 010820 451 PSEILFVTDVYQEATAAKAAGLEVVISIR----PG-NGPLP--ENHGFKTINSFAEI 500 (500)
Q Consensus 451 p~~~l~VGDs~~Di~aA~~aG~~~i~v~~----~~-~~~~~--~~~~~~~i~~l~el 500 (500)
|++|+||||+.+|+++|+++|+.++++++ +. ..... ...++++++|+.||
T Consensus 186 ~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el 242 (254)
T 3umg_A 186 PGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDL 242 (254)
T ss_dssp GGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHH
T ss_pred hHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHH
Confidence 99999999999999999999999999994 32 22222 23349999998764
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.85 E-value=2e-21 Score=181.37 Aligned_cols=122 Identities=20% Similarity=0.202 Sum_probs=105.8
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
..++|++.++|+.|++.|++++++||+....+...++.+ ++..+|+..+ +.....||++..|..++++++++ ++
T Consensus 93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~-~~ 168 (226)
T 1te2_A 93 RPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMF---DLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVD-PL 168 (226)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT---TCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSC-GG
T ss_pred CCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhc---CcHhhCcEEEeccccCCCCCChHHHHHHHHHcCCC-HH
Confidence 568999999999999999999999999999999999888 5666777666 34566799999999999999998 99
Q ss_pred cEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCC-CCCCCceeeCCccCC
Q 010820 453 EILFVTDVYQEATAAKAAGLEVVISIRPGNGPL-PENHGFKTINSFAEI 500 (500)
Q Consensus 453 ~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~-~~~~~~~~i~~l~el 500 (500)
+|++|||+.+|+++|+.+|+.++++.++++... ....++++++++.||
T Consensus 169 ~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el 217 (226)
T 1te2_A 169 TCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTEL 217 (226)
T ss_dssp GEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGC
T ss_pred HeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHH
Confidence 999999999999999999999999999865433 233349999999886
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-21 Score=177.32 Aligned_cols=124 Identities=15% Similarity=0.091 Sum_probs=98.9
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcH---------------HHHHHHHhccCcccccccccccc---cccccCCCCH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSR---------------LAQRLIFGNSNYGDLRKYLSGFF---DTAVGNKRET 436 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~---------------~~~~~~l~~~~~~~l~~~f~~~~---d~~~~~KP~p 436 (500)
.+++||+.++|+.|+++|++++|+||++. ..+...++.++ ..+..+|.... +.....||+|
T Consensus 26 ~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~~~~~~~~~~~~~~~~~KP~~ 104 (179)
T 3l8h_A 26 WIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG-GVVDAIFMCPHGPDDGCACRKPLP 104 (179)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT-CCCCEEEEECCCTTSCCSSSTTSS
T ss_pred ceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC-CceeEEEEcCCCCCCCCCCCCCCH
Confidence 35899999999999999999999999986 56677777773 01333332221 3346689999
Q ss_pred HHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCC----CCCCceeeCCccCC
Q 010820 437 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLP----ENHGFKTINSFAEI 500 (500)
Q Consensus 437 ~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~----~~~~~~~i~~l~el 500 (500)
++|+.++++++++ |++|+||||+.+|+++|+++||.++++.++...... ...++++++++.||
T Consensus 105 ~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el 171 (179)
T 3l8h_A 105 GMYRDIARRYDVD-LAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAV 171 (179)
T ss_dssp HHHHHHHHHHTCC-CTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHH
T ss_pred HHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHH
Confidence 9999999999998 999999999999999999999999999987432221 13349999998764
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-21 Score=184.40 Aligned_cols=123 Identities=15% Similarity=0.111 Sum_probs=102.1
Q ss_pred ccccCCCHHHHHHHHHhC-CcEEEEEcCCcHHHHHHHHhccCcccccccccccc--ccc-ccCCCCHHHHHHHHHHcC--
Q 010820 374 EGEVFDDVPEALEKWHSL-GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTA-VGNKRETPSYVEITNSLG-- 447 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~-G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~-~~~KP~p~~~~~~l~~l~-- 447 (500)
...++||+.++|+.|+++ |++++|+||+....+...++.+ ++..+|+... +.. ...||.+.+|..++++++
T Consensus 91 ~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~ 167 (234)
T 2hcf_A 91 DITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLP---GIDHYFPFGAFADDALDRNELPHIALERARRMTGAN 167 (234)
T ss_dssp GEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTT---TCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCC
T ss_pred CCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHC---CchhhcCcceecCCCcCccchHHHHHHHHHHHhCCC
Confidence 457899999999999999 9999999999999999999999 5666776433 222 345688999999999999
Q ss_pred CCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCC-CCC-CCceeeCCccCC
Q 010820 448 VDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPL-PEN-HGFKTINSFAEI 500 (500)
Q Consensus 448 v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~-~~~-~~~~~i~~l~el 500 (500)
++ |++|+||||+.+|+++|+++|+.++++.++..... ... .++++++++.||
T Consensus 168 ~~-~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~~~el 221 (234)
T 2hcf_A 168 YS-PSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAET 221 (234)
T ss_dssp CC-GGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCH
T ss_pred CC-cccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCCHHhH
Confidence 88 99999999999999999999999999998743322 222 248999998874
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.4e-20 Score=172.84 Aligned_cols=117 Identities=14% Similarity=0.237 Sum_probs=101.7
Q ss_pred cccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCC
Q 010820 373 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDK 450 (500)
Q Consensus 373 ~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~ 450 (500)
....++|++.++|+.|+++|++++++||+...... .++.+ ++..+|+..+ +.....||++++|..++++++++
T Consensus 82 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~---~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~- 156 (207)
T 2go7_A 82 AQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDL---GVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLN- 156 (207)
T ss_dssp GGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHH---TCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCC-
T ss_pred ccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHc---CchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCC-
Confidence 34578999999999999999999999999988888 88887 5666776665 34566799999999999999998
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 451 PSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 451 p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
|++|++|||+.+|+.+|+++|+.++++.++. . .++++++++.||
T Consensus 157 ~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~-----~a~~v~~~~~el 200 (207)
T 2go7_A 157 SDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y-----EGNHRIQALADI 200 (207)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C-----TTEEECSSTTHH
T ss_pred cccEEEECCCHHHHHHHHHCCCeEEEEecCC-C-----CCCEEeCCHHHH
Confidence 9999999999999999999999999998765 3 458999998764
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.1e-20 Score=172.07 Aligned_cols=101 Identities=20% Similarity=0.207 Sum_probs=92.1
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
..++||+.++|+.|+++| +++|+||++...+...++.+ ++..+|+.++ +.....||+|++|..++++++++ |+
T Consensus 85 ~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~---~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~-~~ 159 (200)
T 3cnh_A 85 SQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTF---GLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVR-PE 159 (200)
T ss_dssp CCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHH---TGGGTCSCEEEHHHHSCCTTCHHHHHHHHHHHTCC-GG
T ss_pred CccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhC---CHHHhcceEEeecccCCCCCCHHHHHHHHHHcCCC-HH
Confidence 358999999999999999 99999999999999999988 6677787776 33567899999999999999998 99
Q ss_pred cEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 453 EILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 453 ~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
+|+||||+.+|+++|+++|+.+++++++
T Consensus 160 ~~~~vgD~~~Di~~a~~aG~~~~~~~~~ 187 (200)
T 3cnh_A 160 EAVMVDDRLQNVQAARAVGMHAVQCVDA 187 (200)
T ss_dssp GEEEEESCHHHHHHHHHTTCEEEECSCH
T ss_pred HeEEeCCCHHHHHHHHHCCCEEEEECCc
Confidence 9999999999999999999999999875
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.2e-20 Score=174.13 Aligned_cols=118 Identities=21% Similarity=0.314 Sum_probs=101.4
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
..++||+.+ |+.|+++ ++++|+||+....+...++.+ ++..+|+.++ +.....||+|++|..++++++ |+
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~---~~ 144 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERN---GLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG---AK 144 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHT---TCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT---CS
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHC---CcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC---CC
Confidence 578999999 9999999 999999999999999999998 6677787766 345678999999999999999 68
Q ss_pred cEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCC-CCCCCCceeeCCccCC
Q 010820 453 EILFVTDVYQEATAAKAAGLEVVISIRPGNGP-LPENHGFKTINSFAEI 500 (500)
Q Consensus 453 ~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~-~~~~~~~~~i~~l~el 500 (500)
+|+||||+.+|+++|+++|+.++++.+++... .....++++++++.||
T Consensus 145 ~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el 193 (201)
T 2w43_A 145 EAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKEL 193 (201)
T ss_dssp CCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESSHHHH
T ss_pred cEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECCHHHH
Confidence 99999999999999999999999999975432 2233458999998764
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.7e-21 Score=181.32 Aligned_cols=115 Identities=22% Similarity=0.254 Sum_probs=90.3
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
...++||+.++|+.|+++|++++|+||+.. .+...++++ ++..+|+.++ +.....||+|++|..++++++++ |
T Consensus 93 ~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~---gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~-~ 167 (220)
T 2zg6_A 93 EAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKF---DLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYP-A 167 (220)
T ss_dssp EEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHH---TCGGGCSEEC-----------CCHHHHHHHHHCSS-E
T ss_pred CceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhc---CcHhHeeEEEeccccCCCCCCHHHHHHHHHHcCCC-e
Confidence 457999999999999999999999999977 478888888 6777888777 34566899999999999999998 6
Q ss_pred CcEEEEeCCHh-hHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 452 SEILFVTDVYQ-EATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 452 ~~~l~VGDs~~-Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
+||||+.+ |+.+|+++|+.++++.+++..... +++|+++.||
T Consensus 168 ---~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~~~~----~~~i~~l~el 210 (220)
T 2zg6_A 168 ---VHVGDIYELDYIGAKRSYVDPILLDRYDFYPDV----RDRVKNLREA 210 (220)
T ss_dssp ---EEEESSCCCCCCCSSSCSEEEEEBCTTSCCTTC----CSCBSSHHHH
T ss_pred ---EEEcCCchHhHHHHHHCCCeEEEECCCCCCCCc----ceEECCHHHH
Confidence 99999998 999999999999999876432221 4677777653
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.5e-20 Score=181.01 Aligned_cols=122 Identities=17% Similarity=0.157 Sum_probs=102.7
Q ss_pred ccccCCCHHHHHHHHHhC-CcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCC--
Q 010820 374 EGEVFDDVPEALEKWHSL-GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGV-- 448 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~-G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v-- 448 (500)
...++||+.++|+.|+++ |++++++||+....+...++.++ +. .|+.++ +.....||+|++|..+++++++
T Consensus 112 ~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~---l~-~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~ 187 (275)
T 2qlt_A 112 HSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILK---IK-RPEYFITANDVKQGKPHPEPYLKGRNGLGFPI 187 (275)
T ss_dssp TCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHT---CC-CCSSEECGGGCSSCTTSSHHHHHHHHHTTCCC
T ss_pred CCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcC---CC-ccCEEEEcccCCCCCCChHHHHHHHHHcCCCc
Confidence 457899999999999999 99999999999999999998884 33 244444 3456789999999999999999
Q ss_pred -----CCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCC-CCceeeCCccCC
Q 010820 449 -----DKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPEN-HGFKTINSFAEI 500 (500)
Q Consensus 449 -----~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~-~~~~~i~~l~el 500 (500)
+ |++|++|||+.+|+++|+++|+.++++.++........ .++++++++.||
T Consensus 188 ~~~~~~-~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~~~el 244 (275)
T 2qlt_A 188 NEQDPS-KSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESI 244 (275)
T ss_dssp CSSCGG-GSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESSGGGE
T ss_pred cccCCC-cceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHc
Confidence 8 99999999999999999999999999998755433333 358999998774
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.82 E-value=9.6e-21 Score=178.99 Aligned_cols=119 Identities=15% Similarity=0.091 Sum_probs=94.9
Q ss_pred CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCC
Q 010820 372 ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 372 ~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
.....++||+.++|+.|+++| +++|+||++...+...++++ ++.++|+..+. ..+++|.++..+++ +++ |
T Consensus 92 ~~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~---gl~~~f~~~~~---~~~~K~~~~~~~~~--~~~-~ 161 (231)
T 2p11_A 92 PFASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARS---GLWDEVEGRVL---IYIHKELMLDQVME--CYP-A 161 (231)
T ss_dssp CGGGGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHT---THHHHTTTCEE---EESSGGGCHHHHHH--HSC-C
T ss_pred HHhCCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHc---CcHHhcCeeEE---ecCChHHHHHHHHh--cCC-C
Confidence 344679999999999999999 99999999999999999998 56667765442 13455778877776 787 9
Q ss_pred CcEEEEeCCHh---hHHHHHHcCCcEEEEcCCCC-CC--CCCC--CCceeeCCccCC
Q 010820 452 SEILFVTDVYQ---EATAAKAAGLEVVISIRPGN-GP--LPEN--HGFKTINSFAEI 500 (500)
Q Consensus 452 ~~~l~VGDs~~---Di~aA~~aG~~~i~v~~~~~-~~--~~~~--~~~~~i~~l~el 500 (500)
++|+||||+.+ |+.+|+++||.++++.++.. .. .+.. .++++++++.||
T Consensus 162 ~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~~~el 218 (231)
T 2p11_A 162 RHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVERIGDL 218 (231)
T ss_dssp SEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESSGGGG
T ss_pred ceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecCHHHH
Confidence 99999999998 99999999999999998732 11 1111 258899998875
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=99.82 E-value=4e-20 Score=178.10 Aligned_cols=105 Identities=17% Similarity=0.175 Sum_probs=92.4
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccc-cccc--cccccCCCCHHHHHHHHHHcCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL-SGFF--DTAVGNKRETPSYVEITNSLGVDK 450 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f-~~~~--d~~~~~KP~p~~~~~~l~~l~v~~ 450 (500)
...++||+.++|+.|+++|++++++||+....+...++.+ ++..+| +.++ +.....||+|+.|..++++++++
T Consensus 101 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~- 176 (267)
T 1swv_A 101 YASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEA---ALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVY- 176 (267)
T ss_dssp GCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHH---HHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCC-
T ss_pred ccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHc---CCcccChHheecCCccCCCCCCHHHHHHHHHHhCCC-
Confidence 3578999999999999999999999999999988888887 455554 5554 34566899999999999999998
Q ss_pred C-CcEEEEeCCHhhHHHHHHcCCcEEEEcCCCC
Q 010820 451 P-SEILFVTDVYQEATAAKAAGLEVVISIRPGN 482 (500)
Q Consensus 451 p-~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~ 482 (500)
| ++|++|||+.+|+++|+++|+.++++.++..
T Consensus 177 ~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~ 209 (267)
T 1swv_A 177 PMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSS 209 (267)
T ss_dssp SGGGEEEEESSHHHHHHHHHTTSEEEEECTTCT
T ss_pred CCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCC
Confidence 8 9999999999999999999999999998754
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=99.81 E-value=4.7e-20 Score=171.80 Aligned_cols=117 Identities=16% Similarity=0.221 Sum_probs=98.1
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
...++|++.++|+.|++.|++++++||. ......++.+ ++..+|+..+ +.....||+|+.|+.++++++++ |
T Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~---~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~-~ 162 (221)
T 2wf7_A 89 PADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERM---NLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVA-P 162 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHT---TCGGGCSEECCTTTSSSCTTSSHHHHHHHHHTTCC-G
T ss_pred CCCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHc---ChHHHcceEeccccCCCCCCChHHHHHHHHHcCCC-h
Confidence 3568999999999999999999999998 4556677777 5677777666 44567899999999999999998 9
Q ss_pred CcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 452 SEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 452 ~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
++|++|||+.+|+++|+++|+.+++++... ... .++++++++.|+
T Consensus 163 ~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~---~~~-~a~~v~~~~~el 207 (221)
T 2wf7_A 163 SESIGLEDSQAGIQAIKDSGALPIGVGRPE---DLG-DDIVIVPDTSHY 207 (221)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEEESCHH---HHC-SSSEEESSGGGC
T ss_pred hHeEEEeCCHHHHHHHHHCCCEEEEECCHH---Hhc-cccchhcCHHhC
Confidence 999999999999999999999999996431 222 458899998875
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=3.4e-20 Score=173.07 Aligned_cols=120 Identities=19% Similarity=0.210 Sum_probs=98.3
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCc---------------HHHHHHHHhccCcccccccccccc-------------
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGS---------------RLAQRLIFGNSNYGDLRKYLSGFF------------- 426 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~---------------~~~~~~~l~~~~~~~l~~~f~~~~------------- 426 (500)
..++||+.++|++|+++|++++|+||+. ...+...++.+++. |+.++
T Consensus 49 ~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----f~~~~~~~~~~~~~~~~~ 123 (211)
T 2gmw_A 49 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD-----LDGIYYCPHHPQGSVEEF 123 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC-----CSEEEEECCBTTCSSGGG
T ss_pred CcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc-----eEEEEECCcCCCCccccc
Confidence 3589999999999999999999999999 47788888888542 33322
Q ss_pred -cccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcE-EEEcCCCCCCCC-CCCCceeeCCccCC
Q 010820 427 -DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV-VISIRPGNGPLP-ENHGFKTINSFAEI 500 (500)
Q Consensus 427 -d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~-i~v~~~~~~~~~-~~~~~~~i~~l~el 500 (500)
+.....||+|++|..++++++++ |++|+||||+.+|+.+|+++|+.+ +++.++...... ...++++++++.||
T Consensus 124 ~~~~~~~KP~p~~~~~~~~~lgi~-~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el 199 (211)
T 2gmw_A 124 RQVCDCRKPHPGMLLSARDYLHID-MAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADL 199 (211)
T ss_dssp BSCCSSSTTSCHHHHHHHHHHTBC-GGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGH
T ss_pred CccCcCCCCCHHHHHHHHHHcCCC-HHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHH
Confidence 22456899999999999999998 999999999999999999999999 999887533221 12248999998874
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.81 E-value=2.8e-20 Score=174.49 Aligned_cols=120 Identities=18% Similarity=0.314 Sum_probs=99.6
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccc-cccc--cccccC--CCCHHHHHHHHHHcCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL-SGFF--DTAVGN--KRETPSYVEITNSLGV 448 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f-~~~~--d~~~~~--KP~p~~~~~~l~~l~v 448 (500)
...++|++.++|+.|+. +++++||+....+...++.+ ++..+| +..+ +..... ||+|..|..+++++++
T Consensus 85 ~~~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~---~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~ 158 (229)
T 2fdr_A 85 DVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKV---GLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGV 158 (229)
T ss_dssp HCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHT---TCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTC
T ss_pred CCccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhC---ChHHhccceEEeccccccCCCCcCHHHHHHHHHHcCC
Confidence 35689999999999874 89999999999999999988 566777 6555 334667 9999999999999999
Q ss_pred CCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCC-C----CCCCC-CceeeCCccCC
Q 010820 449 DKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNG-P----LPENH-GFKTINSFAEI 500 (500)
Q Consensus 449 ~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~-~----~~~~~-~~~~i~~l~el 500 (500)
+ |++|++|||+.+|+++|+++|+.+++++++... . ..... ++++++++.||
T Consensus 159 ~-~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el 215 (229)
T 2fdr_A 159 S-PDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDL 215 (229)
T ss_dssp C-GGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGH
T ss_pred C-hhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHH
Confidence 8 999999999999999999999999999987542 0 11222 58999998774
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.7e-19 Score=169.95 Aligned_cols=101 Identities=17% Similarity=0.249 Sum_probs=90.5
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHH------hccCcccccccccccc--cccccCCCCHHHHHHHHHHcC
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIF------GNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLG 447 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l------~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~ 447 (500)
.++||+.++|+.|+++ ++++|+||+....+..++ +.+ ++..+|+.++ +.....||+|++|+.++++++
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~---~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~g 187 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTF---KVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAG 187 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTB---CHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHT
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccC---CHHHhCCEEEeecccCCCCCCHHHHHHHHHHcC
Confidence 4779999999999998 999999999999988655 555 7778888777 346778999999999999999
Q ss_pred CCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCC
Q 010820 448 VDKPSEILFVTDVYQEATAAKAAGLEVVISIRPG 481 (500)
Q Consensus 448 v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~ 481 (500)
++ |++|+||||+.+|+++|+++|+.+++++++.
T Consensus 188 ~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~ 220 (229)
T 4dcc_A 188 ID-PKETFFIDDSEINCKVAQELGISTYTPKAGE 220 (229)
T ss_dssp CC-GGGEEEECSCHHHHHHHHHTTCEEECCCTTC
T ss_pred CC-HHHeEEECCCHHHHHHHHHcCCEEEEECCHH
Confidence 98 9999999999999999999999999999863
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=99.80 E-value=5.4e-19 Score=160.89 Aligned_cols=98 Identities=17% Similarity=0.268 Sum_probs=86.3
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCCc
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSE 453 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~~ 453 (500)
.++|++.++|+.|+++|++++++||... .+...++.+ ++..+|+..+ +.....||+|+.|..++++++++ +
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~---~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~---~ 154 (190)
T 2fi1_A 82 ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKT---SIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS---S 154 (190)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHT---TCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS---S
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHc---CCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCC---e
Confidence 4899999999999999999999999874 577778888 5667777666 34567899999999999999984 9
Q ss_pred EEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 454 ILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 454 ~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
|++|||+.+|+++|+++|+.+++++++
T Consensus 155 ~~~iGD~~~Di~~a~~aG~~~~~~~~~ 181 (190)
T 2fi1_A 155 GLVIGDRPIDIEAGQAAGLDTHLFTSI 181 (190)
T ss_dssp EEEEESSHHHHHHHHHTTCEEEECSCH
T ss_pred EEEEcCCHHHHHHHHHcCCeEEEECCC
Confidence 999999999999999999999999875
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.80 E-value=4.9e-20 Score=170.94 Aligned_cols=101 Identities=14% Similarity=0.253 Sum_probs=91.5
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhc------cCcccccccccccc--cccccCCCCHHHHHHHHHHc
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN------SNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSL 446 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~------~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l 446 (500)
..++||+.++|+.|++ |++++|+||+....+...++. + ++..+|+.++ +.....||+|++|..+++++
T Consensus 88 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~---~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~ 163 (211)
T 2i6x_A 88 EEISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGR---TLDSFFDKVYASCQMGKYKPNEDIFLEMIADS 163 (211)
T ss_dssp EEECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCC---CGGGGSSEEEEHHHHTCCTTSHHHHHHHHHHH
T ss_pred cccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhcccccc---CHHHHcCeEEeecccCCCCCCHHHHHHHHHHh
Confidence 3688999999999999 999999999999999999887 6 6677777776 34567899999999999999
Q ss_pred CCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 447 GVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 447 ~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
+++ |++|+||||+.+|+.+|+++|+.+++++++
T Consensus 164 ~~~-~~~~~~igD~~~Di~~a~~aG~~~~~~~~~ 196 (211)
T 2i6x_A 164 GMK-PEETLFIDDGPANVATAERLGFHTYCPDNG 196 (211)
T ss_dssp CCC-GGGEEEECSCHHHHHHHHHTTCEEECCCTT
T ss_pred CCC-hHHeEEeCCCHHHHHHHHHcCCEEEEECCH
Confidence 998 999999999999999999999999999876
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.6e-19 Score=166.66 Aligned_cols=102 Identities=18% Similarity=0.272 Sum_probs=89.2
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhc-cCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN-SNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~-~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
..++||+.++|+.|+++|++++|+||++.......++. + ++..+|+.++ +.....||+|++|..++++++++ |
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~---~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~-~ 165 (206)
T 2b0c_A 90 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYP---EIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFS-P 165 (206)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCH---HHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCC-G
T ss_pred cccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhcc---ChhhheeeEEEecccCCCCCCHHHHHHHHHHcCCC-H
Confidence 46899999999999999999999999987776655555 4 5666777776 33566899999999999999998 9
Q ss_pred CcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 452 SEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 452 ~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
++|+||||+.+|+.+|+++|+.+++++++
T Consensus 166 ~~~~~vgD~~~Di~~a~~aG~~~~~~~~~ 194 (206)
T 2b0c_A 166 SDTVFFDDNADNIEGANQLGITSILVKDK 194 (206)
T ss_dssp GGEEEEESCHHHHHHHHTTTCEEEECCST
T ss_pred HHeEEeCCCHHHHHHHHHcCCeEEEecCC
Confidence 99999999999999999999999999876
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.8e-19 Score=190.67 Aligned_cols=101 Identities=16% Similarity=0.188 Sum_probs=87.4
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCC------cHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHH
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSG------SRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNS 445 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~------~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~ 445 (500)
...++||+.++|+.|+++|++++|+||+ ........+. ++..+|+.++ +.....||+|++|+.++++
T Consensus 98 ~~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~-----~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~ 172 (555)
T 3i28_A 98 ARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMC-----ELKMHFDFLIESCQVGMVKPEPQIYKFLLDT 172 (555)
T ss_dssp HCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHH-----HHHTTSSEEEEHHHHTCCTTCHHHHHHHHHH
T ss_pred hcCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhh-----hhhhheeEEEeccccCCCCCCHHHHHHHHHH
Confidence 3579999999999999999999999998 4444444432 3467788777 4567789999999999999
Q ss_pred cCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 446 LGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 446 l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
++++ |++|+||||+.+|+++|+++||.+++++++
T Consensus 173 lg~~-p~~~~~v~D~~~di~~a~~aG~~~~~~~~~ 206 (555)
T 3i28_A 173 LKAS-PSEVVFLDDIGANLKPARDLGMVTILVQDT 206 (555)
T ss_dssp HTCC-GGGEEEEESCHHHHHHHHHHTCEEEECSSH
T ss_pred cCCC-hhHEEEECCcHHHHHHHHHcCCEEEEECCC
Confidence 9998 999999999999999999999999999864
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=7.1e-19 Score=163.66 Aligned_cols=114 Identities=17% Similarity=0.160 Sum_probs=94.6
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc------------cccccCCCCHHHHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF------------DTAVGNKRETPSYVEI 442 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~------------d~~~~~KP~p~~~~~~ 442 (500)
..++||+.++|+.|+++|++++|+||+....+...++.+ ++..+|+..+ +.....||+|++|+.+
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~---gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~ 150 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLL---HLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVL 150 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHH---TCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHc---CcchhccceeEEeCCEEEeeeccCCCCCCChHHHHHHH
Confidence 569999999999999999999999999999999999998 5566666554 1233579999999999
Q ss_pred HHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCC
Q 010820 443 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINS 496 (500)
Q Consensus 443 l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~ 496 (500)
+++++++ |++|+||||+.+|+.+|+++|+.+++ +. .+.....+++++++
T Consensus 151 ~~~~g~~-~~~~i~vGDs~~Di~~a~~aG~~~~~-~~---~~~l~~~ad~v~~~ 199 (217)
T 3m1y_A 151 QRLLNIS-KTNTLVVGDGANDLSMFKHAHIKIAF-NA---KEVLKQHATHCINE 199 (217)
T ss_dssp HHHHTCC-STTEEEEECSGGGHHHHTTCSEEEEE-SC---CHHHHTTCSEEECS
T ss_pred HHHcCCC-HhHEEEEeCCHHHHHHHHHCCCeEEE-Cc---cHHHHHhcceeecc
Confidence 9999998 99999999999999999999999877 32 22223334777764
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=99.75 E-value=1.5e-18 Score=158.52 Aligned_cols=102 Identities=18% Similarity=0.228 Sum_probs=90.0
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCc-HHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGS-RLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~-~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
...++||+.++|+.|+++|++++|+||++ ...+...++.+ ++..+|+..+ ...+|+|+.|..++++++++ |+
T Consensus 66 ~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~---gl~~~f~~~~---~~~~~k~~~~~~~~~~~~~~-~~ 138 (187)
T 2wm8_A 66 DVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELF---DLFRYFVHRE---IYPGSKITHFERLQQKTGIP-FS 138 (187)
T ss_dssp EECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHT---TCTTTEEEEE---ESSSCHHHHHHHHHHHHCCC-GG
T ss_pred ccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHc---CcHhhcceeE---EEeCchHHHHHHHHHHcCCC-hH
Confidence 45689999999999999999999999999 79999999888 5566666543 23478999999999999998 99
Q ss_pred cEEEEeCCHhhHHHHHHcCCcEEEEcCCCC
Q 010820 453 EILFVTDVYQEATAAKAAGLEVVISIRPGN 482 (500)
Q Consensus 453 ~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~ 482 (500)
+|+||||+.+|+++|+++|+.++++.++..
T Consensus 139 ~~~~igD~~~Di~~a~~aG~~~i~v~~g~~ 168 (187)
T 2wm8_A 139 QMIFFDDERRNIVDVSKLGVTCIHIQNGMN 168 (187)
T ss_dssp GEEEEESCHHHHHHHHTTTCEEEECSSSCC
T ss_pred HEEEEeCCccChHHHHHcCCEEEEECCCCC
Confidence 999999999999999999999999998743
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.1e-18 Score=150.26 Aligned_cols=100 Identities=13% Similarity=0.050 Sum_probs=89.5
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCCcE
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSEI 454 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~~~ 454 (500)
++||+.++|+.|+++|++++|+||++...+...++.+ ++..+|+.++ +.....||+|++|..++++++++ |++|
T Consensus 19 ~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~-~~~~ 94 (137)
T 2pr7_A 19 DQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIREL---ETNGVVDKVLLSGELGVEKPEEAAFQAAADAIDLP-MRDC 94 (137)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHH---HHTTSSSEEEEHHHHSCCTTSHHHHHHHHHHTTCC-GGGE
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHC---ChHhhccEEEEeccCCCCCCCHHHHHHHHHHcCCC-cccE
Confidence 5677889999999999999999999988888888888 6677787776 33566899999999999999998 9999
Q ss_pred EEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 455 LFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 455 l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
+||||+.+|+.+|+++|+.++++.++
T Consensus 95 ~~vgD~~~di~~a~~~G~~~i~~~~~ 120 (137)
T 2pr7_A 95 VLVDDSILNVRGAVEAGLVGVYYQQF 120 (137)
T ss_dssp EEEESCHHHHHHHHHHTCEEEECSCH
T ss_pred EEEcCCHHHHHHHHHCCCEEEEeCCh
Confidence 99999999999999999999999875
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.74 E-value=2.7e-18 Score=162.58 Aligned_cols=124 Identities=15% Similarity=0.035 Sum_probs=95.0
Q ss_pred cccccCCCHHHHHHHHHhCCcEEE---------------------------------EEcCCcHHHHHHHHhccCccccc
Q 010820 373 LEGEVFDDVPEALEKWHSLGTKVY---------------------------------IYSSGSRLAQRLIFGNSNYGDLR 419 (500)
Q Consensus 373 ~~~~~~pgv~~~L~~L~~~G~~l~---------------------------------v~Tn~~~~~~~~~l~~~~~~~l~ 419 (500)
....+++++.++|+.|++.|++++ ++||.. ......++.++ .+.
T Consensus 84 ~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~~-~~~~~~~~~~~--~~~ 160 (250)
T 2c4n_A 84 GKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPD-THGRGFYPACG--ALC 160 (250)
T ss_dssp CCEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCC-SBSSTTCBCHH--HHH
T ss_pred CCEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCC-CCCCCeeecch--HHH
Confidence 345688999999999999999999 999977 33333333331 133
Q ss_pred ccccccc--cccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCC-HhhHHHHHHcCCcEEEEcCCCCC-CCCC---CCCce
Q 010820 420 KYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDV-YQEATAAKAAGLEVVISIRPGNG-PLPE---NHGFK 492 (500)
Q Consensus 420 ~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs-~~Di~aA~~aG~~~i~v~~~~~~-~~~~---~~~~~ 492 (500)
.+|+... +.....||+|.+|+.+++++|++ |++|++|||+ .+|+++|+.+|+.+++|.++... +... ..+++
T Consensus 161 ~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~-~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~ 239 (250)
T 2c4n_A 161 AGIEKISGRKPFYVGKPSPWIIRAALNKMQAH-SEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSW 239 (250)
T ss_dssp HHHHHHHCCCCEECSTTSTHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSE
T ss_pred HHHHHHhCCCceEeCCCCHHHHHHHHHHcCCC-cceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCE
Confidence 3344333 33466899999999999999998 9999999999 69999999999999999987443 3332 24599
Q ss_pred eeCCccCC
Q 010820 493 TINSFAEI 500 (500)
Q Consensus 493 ~i~~l~el 500 (500)
+++++.||
T Consensus 240 v~~~~~el 247 (250)
T 2c4n_A 240 IYPSVAEI 247 (250)
T ss_dssp EESSGGGC
T ss_pred EECCHHHh
Confidence 99999876
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.8e-18 Score=156.58 Aligned_cols=101 Identities=14% Similarity=0.087 Sum_probs=84.9
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCC---------------cHHHHHHHHhccCcccccccccccc-------cccccC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSG---------------SRLAQRLIFGNSNYGDLRKYLSGFF-------DTAVGN 432 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~---------------~~~~~~~~l~~~~~~~l~~~f~~~~-------d~~~~~ 432 (500)
..++||+.++|+.|+++|++++|+||+ ....+...++.+++ . |+.++ +.....
T Consensus 41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl---~--fd~v~~s~~~~~~~~~~~ 115 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGV---Q--FDEVLICPHLPADECDCR 115 (176)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTC---C--EEEEEEECCCGGGCCSSS
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCC---C--eeEEEEcCCCCccccccc
Confidence 358999999999999999999999998 67888899998853 3 44443 345678
Q ss_pred CCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCC
Q 010820 433 KRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPG 481 (500)
Q Consensus 433 KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~ 481 (500)
||+|++|+.++++++++ |++|+||||+.+|+++|+++||.+|++.++.
T Consensus 116 KP~p~~~~~~~~~~gi~-~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~~ 163 (176)
T 2fpr_A 116 KPKVKLVERYLAEQAMD-RANSYVIGDRATDIQLAENMGINGLRYDRET 163 (176)
T ss_dssp TTSCGGGGGGC----CC-GGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred CCCHHHHHHHHHHcCCC-HHHEEEEcCCHHHHHHHHHcCCeEEEEcCCc
Confidence 99999999999999998 9999999999999999999999999998863
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.74 E-value=3.1e-18 Score=160.63 Aligned_cols=121 Identities=12% Similarity=0.107 Sum_probs=92.5
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc-----------ccc---ccCCCCHHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-----------DTA---VGNKRETPSYV 440 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~-----------d~~---~~~KP~p~~~~ 440 (500)
.+++||+.++|+.|+++|++++|+||+....+...++++++.. ..+|+..+ +.. ...||+|++|.
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~ 163 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPA-TNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIK 163 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCG-GGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHH
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCc-ccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHHH
Confidence 5699999999999999999999999999999999999995421 12444321 111 11368889999
Q ss_pred HHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 441 EITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 441 ~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
.+++++++. +|+||||+.+|+.+|+++|+ ++++............++++++++.||
T Consensus 164 ~~~~~~~~~---~~~~vGDs~~Di~~a~~ag~-~i~~~~~~~~~~~~~~~~~~~~~~~el 219 (225)
T 1nnl_A 164 LLKEKFHFK---KIIMIGDGATDMEACPPADA-FIGFGGNVIRQQVKDNAKWYITDFVEL 219 (225)
T ss_dssp HHHHHHCCS---CEEEEESSHHHHTTTTTSSE-EEEECSSCCCHHHHHHCSEEESCGGGG
T ss_pred HHHHHcCCC---cEEEEeCcHHhHHHHHhCCe-EEEecCccccHHHHhcCCeeecCHHHH
Confidence 999999974 89999999999999999999 887754322211122248999998875
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.4e-18 Score=162.79 Aligned_cols=123 Identities=15% Similarity=0.091 Sum_probs=97.0
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcH---------------HHHHHHHhccCcccccccccccc----------cccc
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSR---------------LAQRLIFGNSNYGDLRKYLSGFF----------DTAV 430 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~---------------~~~~~~l~~~~~~~l~~~f~~~~----------d~~~ 430 (500)
.++||+.++|+.|+++|++++|+||+.. ..+...++.+++. +..+|.... +...
T Consensus 56 ~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~~~~g~~~~~~~~~~ 134 (218)
T 2o2x_A 56 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF-VDMVLACAYHEAGVGPLAIPDHP 134 (218)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC-CSEEEEECCCTTCCSTTCCSSCT
T ss_pred eECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc-eeeEEEeecCCCCceeecccCCc
Confidence 5899999999999999999999999998 7888888888532 222222111 2345
Q ss_pred cCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcE-EEEcCCCCCCCC-CCCCceeeCCccCC
Q 010820 431 GNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV-VISIRPGNGPLP-ENHGFKTINSFAEI 500 (500)
Q Consensus 431 ~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~-i~v~~~~~~~~~-~~~~~~~i~~l~el 500 (500)
..||+|.+|..++++++++ |++|+||||+.+|+.+|+++|+.+ +++.++...... ...++++++++.||
T Consensus 135 ~~KP~~~~~~~~~~~~~i~-~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l~el 205 (218)
T 2o2x_A 135 MRKPNPGMLVEAGKRLALD-LQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDL 205 (218)
T ss_dssp TSTTSCHHHHHHHHHHTCC-GGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHH
T ss_pred cCCCCHHHHHHHHHHcCCC-HHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecccHHHH
Confidence 6799999999999999998 999999999999999999999999 999987432221 22237777777653
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.1e-17 Score=165.74 Aligned_cols=98 Identities=14% Similarity=0.154 Sum_probs=86.7
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccccccccc------------ccccCCCCHHHHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFD------------TAVGNKRETPSYVEI 442 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d------------~~~~~KP~p~~~~~~ 442 (500)
..++||+.++|+.|+++|++++|+||+....+..+++.+ ++..+|+..+. .....||+|++|..+
T Consensus 178 ~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~l---gl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~ 254 (317)
T 4eze_A 178 MTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARY---QLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDL 254 (317)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHH---TCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHH
T ss_pred CEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHc---CCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHH
Confidence 469999999999999999999999999999999999999 55666665431 123459999999999
Q ss_pred HHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 010820 443 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 443 l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
+++++++ |++|+||||+.+|+.+|+++|+.+++
T Consensus 255 ~~~lgv~-~~~~i~VGDs~~Di~aa~~AG~~va~ 287 (317)
T 4eze_A 255 AARLNIA-TENIIACGDGANDLPMLEHAGTGIAW 287 (317)
T ss_dssp HHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHHcCCC-cceEEEEeCCHHHHHHHHHCCCeEEe
Confidence 9999998 99999999999999999999998777
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.73 E-value=2.1e-18 Score=166.21 Aligned_cols=121 Identities=12% Similarity=0.122 Sum_probs=93.1
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHH--HHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLA--QRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDK 450 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~--~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~ 450 (500)
..++|++.++|+.|+ +|+++ |+||+.... ....+ .+..++..+|+..+ +.....||+|++|+.++++++++
T Consensus 125 ~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~--~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~~~~- 199 (264)
T 1yv9_A 125 ELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLL--PGAGSVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVE- 199 (264)
T ss_dssp TCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEE--ECHHHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHHCSC-
T ss_pred CcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcc--cCCcHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCC-
Confidence 468899999999997 89987 999987632 11101 11113455666655 33456899999999999999998
Q ss_pred CCcEEEEeCC-HhhHHHHHHcCCcEEEEcCCCCCC-CCCC---CCceeeCCccCC
Q 010820 451 PSEILFVTDV-YQEATAAKAAGLEVVISIRPGNGP-LPEN---HGFKTINSFAEI 500 (500)
Q Consensus 451 p~~~l~VGDs-~~Di~aA~~aG~~~i~v~~~~~~~-~~~~---~~~~~i~~l~el 500 (500)
|++|+||||+ .+|+.+|+++|+.+++|.++.... .+.. .++++++++.|+
T Consensus 200 ~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el 254 (264)
T 1yv9_A 200 KEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEW 254 (264)
T ss_dssp GGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGC
T ss_pred HHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEecHHHH
Confidence 9999999999 599999999999999999984332 3332 359999999885
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.1e-17 Score=155.60 Aligned_cols=98 Identities=10% Similarity=0.069 Sum_probs=82.5
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc---c---------ccccCCCCHHHHHHHH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF---D---------TAVGNKRETPSYVEIT 443 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~---d---------~~~~~KP~p~~~~~~l 443 (500)
.++||+.++|+.|+++|++++|+||+....++.+++.+| +..+|...+ + .....++++..+..++
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~ 168 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFG---VQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWL 168 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTT---CCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcC---CCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHH
Confidence 579999999999999999999999999999999999995 444433222 1 1223467889999999
Q ss_pred HHcC---CCCCCcEEEEeCCHhhHHHHHHcCCcEEEE
Q 010820 444 NSLG---VDKPSEILFVTDVYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 444 ~~l~---v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v 477 (500)
++++ ++ |++|+||||+.+|+.+++++|+.++..
T Consensus 169 ~~~~~~~~~-~~~~~~vGDs~~D~~~~~~ag~~~~~~ 204 (232)
T 3fvv_A 169 AGMGLALGD-FAESYFYSDSVNDVPLLEAVTRPIAAN 204 (232)
T ss_dssp HHTTCCGGG-SSEEEEEECCGGGHHHHHHSSEEEEES
T ss_pred HHcCCCcCc-hhheEEEeCCHhhHHHHHhCCCeEEEC
Confidence 9999 98 999999999999999999999887663
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.69 E-value=8.6e-18 Score=160.94 Aligned_cols=119 Identities=14% Similarity=0.109 Sum_probs=93.6
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccccc---ccc--cccccCCCCHHHHHHHHHHcCCCC
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS---GFF--DTAVGNKRETPSYVEITNSLGVDK 450 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~---~~~--d~~~~~KP~p~~~~~~l~~l~v~~ 450 (500)
.++|++.++|+.|+ +|+++ ++||.........+... ++..+|+ ..+ +.....||+|++|..++++++++
T Consensus 122 ~~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~- 195 (259)
T 2ho4_A 122 FHYQLLNQAFRLLL-DGAPL-IAIHKARYYKRKDGLAL---GPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCA- 195 (259)
T ss_dssp CBHHHHHHHHHHHH-TTCCE-EESCCCSEEEETTEEEE---CSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCC-
T ss_pred CCHHHHHHHHHHHH-CCCEE-EEECCCCcCcccCCccc---CCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCC-
Confidence 37889999999999 89999 99998766555555555 4445554 222 33456899999999999999998
Q ss_pred CCcEEEEeCCH-hhHHHHHHcCCcEEEEcCCC-CCCCC---CCCCceeeCCccCC
Q 010820 451 PSEILFVTDVY-QEATAAKAAGLEVVISIRPG-NGPLP---ENHGFKTINSFAEI 500 (500)
Q Consensus 451 p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~-~~~~~---~~~~~~~i~~l~el 500 (500)
|++|+||||+. +|+.+|+++|+.++++.++. ..... ...++++++++.||
T Consensus 196 ~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l 250 (259)
T 2ho4_A 196 PEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTCESFPHA 250 (259)
T ss_dssp GGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHH
T ss_pred hHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEECCHHHH
Confidence 99999999999 99999999999999999873 22221 23348999998764
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.69 E-value=2.7e-17 Score=152.05 Aligned_cols=98 Identities=12% Similarity=0.084 Sum_probs=83.4
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccccc-ccc--cccc--c-CCCCHHHHHHHHHHcC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS-GFF--DTAV--G-NKRETPSYVEITNSLG 447 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~-~~~--d~~~--~-~KP~p~~~~~~l~~l~ 447 (500)
..+++||+.++|+.|+++ ++++|+||+....+...++++ ++..+|+ .+. +... . .||+|++|..++++++
T Consensus 67 ~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~---gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~ 142 (206)
T 1rku_A 67 TLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQL---GFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFK 142 (206)
T ss_dssp TCCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHT---TCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHH
T ss_pred hcCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHc---CCcceecceeEEcCCceEEeeecCCCchHHHHHHHHH
Confidence 456899999999999999 999999999999999999999 5566674 333 1221 2 2599999999999999
Q ss_pred CCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 010820 448 VDKPSEILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 448 v~~p~~~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
+. |++|+||||+.+|+.+|+++|+.+++
T Consensus 143 ~~-~~~~~~iGD~~~Di~~a~~aG~~~~~ 170 (206)
T 1rku_A 143 SL-YYRVIAAGDSYNDTTMLSEAHAGILF 170 (206)
T ss_dssp HT-TCEEEEEECSSTTHHHHHHSSEEEEE
T ss_pred hc-CCEEEEEeCChhhHHHHHhcCccEEE
Confidence 98 99999999999999999999998663
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=99.69 E-value=2.4e-17 Score=153.56 Aligned_cols=97 Identities=12% Similarity=0.113 Sum_probs=77.9
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc---c--ccccCCCCHHHHHHHHHHcCCCC
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF---D--TAVGNKRETPSYVEITNSLGVDK 450 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~---d--~~~~~KP~p~~~~~~l~~l~v~~ 450 (500)
.++|++.++|+.|+++|++++|+||+........++.+ .++|+.++ + .....||+|++|.++++++++
T Consensus 88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l-----~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~-- 160 (211)
T 2b82_A 88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTL-----ADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI-- 160 (211)
T ss_dssp EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHH-----HHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE--
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHH-----HHhcCccccccchhhhcCCCCCHHHHHHHHHHCCC--
Confidence 36789999999999999999999999765444444332 33444332 1 234579999999999999986
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCC
Q 010820 451 PSEILFVTDVYQEATAAKAAGLEVVISIRPGN 482 (500)
Q Consensus 451 p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~ 482 (500)
|+||||+.+|+++|+++||.+|++.++..
T Consensus 161 ---~l~VGDs~~Di~aA~~aG~~~i~v~~g~~ 189 (211)
T 2b82_A 161 ---RIFYGDSDNDITAARDVGARGIRILRASN 189 (211)
T ss_dssp ---EEEEESSHHHHHHHHHTTCEEEECCCCTT
T ss_pred ---EEEEECCHHHHHHHHHCCCeEEEEecCCC
Confidence 99999999999999999999999998743
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.6e-17 Score=154.06 Aligned_cols=123 Identities=13% Similarity=0.122 Sum_probs=91.8
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccc--cc------cccccCCCCHHHHHHHHHH-
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSG--FF------DTAVGNKRETPSYVEITNS- 445 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~--~~------d~~~~~KP~p~~~~~~l~~- 445 (500)
..++||+.++|+.|+++|++++|+||+....+...++.+++.. ..+|.. .+ ......||++..+.+.+.+
T Consensus 81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 159 (219)
T 3kd3_A 81 NLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPR-ENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKA 159 (219)
T ss_dssp TTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCG-GGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHH
T ss_pred ccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCc-ccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHH
Confidence 3488999999999999999999999999999999999984321 223321 11 1124568877666666654
Q ss_pred cCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCC-CCCCC-CCCCceeeCCccCC
Q 010820 446 LGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPG-NGPLP-ENHGFKTINSFAEI 500 (500)
Q Consensus 446 l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~-~~~~~-~~~~~~~i~~l~el 500 (500)
++++ |++|+||||+.+|+.++ ++|+.++++.++. +.... ...++++++++.||
T Consensus 160 ~~~~-~~~~~~vGD~~~Di~~~-~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el 214 (219)
T 3kd3_A 160 KGLI-DGEVIAIGDGYTDYQLY-EKGYATKFIAYMEHIEREKVINLSKYVARNVAEL 214 (219)
T ss_dssp GGGC-CSEEEEEESSHHHHHHH-HHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHH
T ss_pred hCCC-CCCEEEEECCHhHHHHH-hCCCCcEEEeccCccccHHHHhhcceeeCCHHHH
Confidence 5998 99999999999999998 6899998887763 32221 22348999998764
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.8e-16 Score=163.10 Aligned_cols=98 Identities=17% Similarity=0.165 Sum_probs=85.6
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc------------cccccCCCCHHHHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF------------DTAVGNKRETPSYVEI 442 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~------------d~~~~~KP~p~~~~~~ 442 (500)
.+++||+.++|+.|+++|++++|+||+....+..+++.+| +..+|...+ +.....||+|++|..+
T Consensus 255 ~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lg---l~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~ 331 (415)
T 3p96_A 255 LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELM---LDYVAANELEIVDGTLTGRVVGPIIDRAGKATALREF 331 (415)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTT---CSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHH
T ss_pred CccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcC---ccceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHH
Confidence 3699999999999999999999999999999999999994 455544322 1233479999999999
Q ss_pred HHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 010820 443 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 443 l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
+++++++ |++|+||||+.+|+.+|+++|+.+++
T Consensus 332 ~~~~gi~-~~~~i~vGD~~~Di~~a~~aG~~va~ 364 (415)
T 3p96_A 332 AQRAGVP-MAQTVAVGDGANDIDMLAAAGLGIAF 364 (415)
T ss_dssp HHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHHcCcC-hhhEEEEECCHHHHHHHHHCCCeEEE
Confidence 9999998 99999999999999999999998887
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.67 E-value=8.1e-17 Score=152.54 Aligned_cols=117 Identities=12% Similarity=0.087 Sum_probs=88.7
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--ccccc--------CCCCHH-HHH--
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVG--------NKRETP-SYV-- 440 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~--------~KP~p~-~~~-- 440 (500)
..+++||+.++|+.|+++|++++|+||++...+...++ ++ .++ +.++ +.... .||+|. +|.
T Consensus 75 ~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l---~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~ 148 (236)
T 2fea_A 75 DAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GI---VEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQC 148 (236)
T ss_dssp HCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TT---SCG-GGEEEEEEECSSSBCEEECTTCCCTTCCSCC
T ss_pred CCCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cC---CCC-CeEEeeeeEEcCCceEEecCCCCcccccccc
Confidence 35799999999999999999999999999999999887 32 233 4444 21221 689998 455
Q ss_pred -----HHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCC-C-CCceeeCCccCC
Q 010820 441 -----EITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPE-N-HGFKTINSFAEI 500 (500)
Q Consensus 441 -----~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~-~-~~~~~i~~l~el 500 (500)
.++++++++ |++|+||||+.+|+.+|+++|+.++. ++. ..... . .++++++++.||
T Consensus 149 ~~~K~~~~~~~~~~-~~~~~~vGDs~~Di~~a~~aG~~~~~--~~~-~~~~~~~~~~~~~~~~~~el 211 (236)
T 2fea_A 149 GCCKPSVIHELSEP-NQYIIMIGDSVTDVEAAKLSDLCFAR--DYL-LNECREQNLNHLPYQDFYEI 211 (236)
T ss_dssp SSCHHHHHHHHCCT-TCEEEEEECCGGGHHHHHTCSEEEEC--HHH-HHHHHHTTCCEECCSSHHHH
T ss_pred CCcHHHHHHHHhcc-CCeEEEEeCChHHHHHHHhCCeeeec--hHH-HHHHHHCCCCeeecCCHHHH
Confidence 899999998 99999999999999999999998863 221 11111 1 146788877653
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.9e-17 Score=147.46 Aligned_cols=109 Identities=11% Similarity=0.082 Sum_probs=86.4
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEEE
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILF 456 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~ 456 (500)
+.|+..++|+.|+++|++++|+||++...+...++++ ++..+|+. .||++++|..++++++++ |++|+|
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~---gl~~~~~~-------~kp~~~~~~~~~~~~~~~-~~~~~~ 105 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKEL---GVEEIYTG-------SYKKLEIYEKIKEKYSLK-DEEIGF 105 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHT---TCCEEEEC-------C--CHHHHHHHHHHTTCC-GGGEEE
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHc---CCHhhccC-------CCCCHHHHHHHHHHcCCC-HHHEEE
Confidence 3455679999999999999999999999999999888 44545532 699999999999999998 999999
Q ss_pred EeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccC
Q 010820 457 VTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE 499 (500)
Q Consensus 457 VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e 499 (500)
|||+.+|+.+|+++|+.+++.+. .+.....++++++++.+
T Consensus 106 vGD~~~Di~~a~~ag~~~~~~~~---~~~~~~~a~~v~~~~~~ 145 (162)
T 2p9j_A 106 IGDDVVDIEVMKKVGFPVAVRNA---VEEVRKVAVYITQRNGG 145 (162)
T ss_dssp EECSGGGHHHHHHSSEEEECTTS---CHHHHHHCSEECSSCSS
T ss_pred ECCCHHHHHHHHHCCCeEEecCc---cHHHHhhCCEEecCCCC
Confidence 99999999999999998775432 11112234788887654
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=6.9e-16 Score=142.25 Aligned_cols=118 Identities=18% Similarity=0.191 Sum_probs=89.3
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc---cc---------cccCCCCHHHHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF---DT---------AVGNKRETPSYVEI 442 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~---d~---------~~~~KP~p~~~~~~ 442 (500)
..++|++.++|+.|+++|++++++||+....+...++.++ +..+|...+ +. ....+++++.+..+
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~ 151 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG---LDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKI 151 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHT---CSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcC---CCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHHH
Confidence 4578999999999999999999999999888888887774 333333211 10 01235678999999
Q ss_pred HHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCC--ccCC
Q 010820 443 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINS--FAEI 500 (500)
Q Consensus 443 l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~--l~el 500 (500)
+++++++ |++|++|||+.+|+.+|+++|+.+ .+. + .+.....+++++++ +.||
T Consensus 152 ~~~lgi~-~~~~~~iGD~~~Di~~~~~ag~~~-~~~-~--~~~~~~~a~~v~~~~~~~~l 206 (211)
T 1l7m_A 152 AKIEGIN-LEDTVAVGDGANDISMFKKAGLKI-AFC-A--KPILKEKADICIEKRDLREI 206 (211)
T ss_dssp HHHHTCC-GGGEEEEECSGGGHHHHHHCSEEE-EES-C--CHHHHTTCSEEECSSCGGGG
T ss_pred HHHcCCC-HHHEEEEecChhHHHHHHHCCCEE-EEC-C--CHHHHhhcceeecchhHHHH
Confidence 9999998 999999999999999999999964 343 1 11222335888887 7764
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=2.6e-18 Score=157.80 Aligned_cols=118 Identities=12% Similarity=0.118 Sum_probs=89.7
Q ss_pred HHHHhhccc--CcccccCCCHHHHHHHHHhC-CcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHH
Q 010820 363 IWRTGFESN--ELEGEVFDDVPEALEKWHSL-GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSY 439 (500)
Q Consensus 363 ~~~~~~~~~--~~~~~~~pgv~~~L~~L~~~-G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~ 439 (500)
.+.+.|... ....+++||+.++|+.|+++ |++++|+||+....+...++++ ++ |+.++..
T Consensus 58 ~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~---gl---f~~i~~~----------- 120 (193)
T 2i7d_A 58 KVASVYEAPGFFLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKY---RW---VEQHLGP----------- 120 (193)
T ss_dssp HHHHHHTSTTTTTTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHH---HH---HHHHHCH-----------
T ss_pred HHHHHHHhcCccccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHh---Cc---hhhhcCH-----------
Confidence 344555543 23467999999999999999 9999999999988888888887 44 4443311
Q ss_pred HHHHHHcCCCCCCcEEEEeCCHhh----HHHHH-HcCCcEEEEcCCCCCCCCCCCCceeeCCccC
Q 010820 440 VEITNSLGVDKPSEILFVTDVYQE----ATAAK-AAGLEVVISIRPGNGPLPENHGFKTINSFAE 499 (500)
Q Consensus 440 ~~~l~~l~v~~p~~~l~VGDs~~D----i~aA~-~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e 499 (500)
.++++++++ |++|+||||+..| +.+|+ ++||.+|++.++.+...........++++.+
T Consensus 121 -~~~~~~~~~-~~~~~~vgDs~~dD~~~i~~A~~~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~~ 183 (193)
T 2i7d_A 121 -QFVERIILT-RDKTVVLGDLLIDDKDTVRGQEETPSWEHILFTCCHNRHLVLPPTRRRLLSWSD 183 (193)
T ss_dssp -HHHTTEEEC-SCGGGBCCSEEEESSSCCCSSCSSCSSEEEEECCGGGTTCCCCTTSCEECSTTS
T ss_pred -HHHHHcCCC-cccEEEECCchhhCcHHHhhcccccccceEEEEeccCcccccccchHHHhhHHH
Confidence 278999998 9999999999998 99999 9999999998875433221122346888743
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=99.64 E-value=1e-17 Score=154.28 Aligned_cols=105 Identities=19% Similarity=0.228 Sum_probs=85.9
Q ss_pred ccccCCCHHHHHHHHHhC-CcEEEEEcCCcHHHHHHHHhccCcccccc-cccccccccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSL-GTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSGFFDTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~-G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~-~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
...++||+.++|+.|+++ |++++|+||++...+...++++ ++.+ +|+ ..++++++++ |
T Consensus 73 ~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~---~l~~~~f~----------------~~~~~~l~~~-~ 132 (197)
T 1q92_A 73 ELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKY---AWVEKYFG----------------PDFLEQIVLT-R 132 (197)
T ss_dssp TCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHH---HHHHHHHC----------------GGGGGGEEEC-S
T ss_pred cCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHh---chHHHhch----------------HHHHHHhccC-C
Confidence 467999999999999999 9999999999988888888777 5555 553 5678899998 9
Q ss_pred CcEEEEeCCHhh----HHHHH-HcCCcEEEEcCCCCCCCCCCCCceeeCCcc
Q 010820 452 SEILFVTDVYQE----ATAAK-AAGLEVVISIRPGNGPLPENHGFKTINSFA 498 (500)
Q Consensus 452 ~~~l~VGDs~~D----i~aA~-~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~ 498 (500)
++|+||||+..| +.+|+ ++||.+|++.++.+...........++++.
T Consensus 133 ~~~~~vgDs~~dD~~~~~~a~~~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~ 184 (197)
T 1q92_A 133 DKTVVSADLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWA 184 (197)
T ss_dssp CSTTSCCSEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTT
T ss_pred ccEEEECcccccCCchhhhcccCCCceEEEecCcccccccccccchhhhhHH
Confidence 999999999999 99999 999999999987554322111245788884
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.4e-17 Score=162.31 Aligned_cols=116 Identities=11% Similarity=0.098 Sum_probs=91.8
Q ss_pred CHHHHHHHHHhCCcEEEEEcCCcHHHH--H--HHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHc----CCC
Q 010820 380 DVPEALEKWHSLGTKVYIYSSGSRLAQ--R--LIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSL----GVD 449 (500)
Q Consensus 380 gv~~~L~~L~~~G~~l~v~Tn~~~~~~--~--~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l----~v~ 449 (500)
...++++.|+++|++ +|+||++.... . ..++.. ++..+|+.++ +.....||+|++|+.+++++ +++
T Consensus 149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~---~l~~~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~ 224 (284)
T 2hx1_A 149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIG---GVATMIESILGRRFIRFGKPDSQMFMFAYDMLRQKMEIS 224 (284)
T ss_dssp HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHH---HHHHHHHHHHCSCEEEESTTSSHHHHHHHHHHHTTSCCC
T ss_pred cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCC---hHHHHHHHHhCCceeEecCCCHHHHHHHHHHHhhccCCC
Confidence 566777789999999 99999886654 2 112223 5566777666 33567899999999999999 998
Q ss_pred CCCcEEEEeCCH-hhHHHHHHcCCcEEEEcCCCCCC-CCC-------CCCceeeCCccCC
Q 010820 450 KPSEILFVTDVY-QEATAAKAAGLEVVISIRPGNGP-LPE-------NHGFKTINSFAEI 500 (500)
Q Consensus 450 ~p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~-~~~-------~~~~~~i~~l~el 500 (500)
|++|+||||++ +|+.+|+++||.++++.++.... ... ..++++++++.||
T Consensus 225 -~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~el 283 (284)
T 2hx1_A 225 -KREILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAVIE 283 (284)
T ss_dssp -GGGEEEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSCCC
T ss_pred -cceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchhhh
Confidence 99999999996 99999999999999999974432 222 3459999999986
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=99.62 E-value=2.3e-16 Score=159.17 Aligned_cols=123 Identities=18% Similarity=0.182 Sum_probs=103.9
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccccc--ccc--cccc-----------cCCCCHHH
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS--GFF--DTAV-----------GNKRETPS 438 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~--~~~--d~~~-----------~~KP~p~~ 438 (500)
...++||+.++|+.|+++|++++|+||++...+...++++ ++..+|+ .++ +... ..||+|++
T Consensus 213 ~~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~l---gL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~ 289 (384)
T 1qyi_A 213 ILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENL---GLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFS 289 (384)
T ss_dssp BSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH---TCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHH
T ss_pred CCCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHc---CChHhcCCCEEEecccccccccccccccCCCCCCHHH
Confidence 4578999999999999999999999999999999999999 6777887 455 2222 37999999
Q ss_pred HHHHHHHcC--------------CCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCC----CCC-CCCCceeeCCccC
Q 010820 439 YVEITNSLG--------------VDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNG----PLP-ENHGFKTINSFAE 499 (500)
Q Consensus 439 ~~~~l~~l~--------------v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~----~~~-~~~~~~~i~~l~e 499 (500)
|..++++++ ++ |++|+||||+.+|+.+|+++||.+|++.++... ... ...++++|+++.|
T Consensus 290 ~~~a~~~lg~~~~~~~~~~~~~~v~-p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi~sl~e 368 (384)
T 1qyi_A 290 YIAALYGNNRDKYESYINKQDNIVN-KDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGE 368 (384)
T ss_dssp HHHHHHCCCGGGHHHHHHCCTTCSC-TTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGG
T ss_pred HHHHHHHcCCccccccccccccCCC-CcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEECCHHH
Confidence 999999999 87 999999999999999999999999999987431 111 1234899999987
Q ss_pred C
Q 010820 500 I 500 (500)
Q Consensus 500 l 500 (500)
|
T Consensus 369 L 369 (384)
T 1qyi_A 369 L 369 (384)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.6e-15 Score=151.48 Aligned_cols=98 Identities=20% Similarity=0.228 Sum_probs=85.7
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc------------cccccCCCCHHHHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF------------DTAVGNKRETPSYVEI 442 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~------------d~~~~~KP~p~~~~~~ 442 (500)
.+++||+.++|+.|+++|++++|+||+....+..+++.+ ++..+|...+ +.....||+|++|..+
T Consensus 177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~l---gl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~ 253 (335)
T 3n28_A 177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQL---SLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTL 253 (335)
T ss_dssp CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHH---TCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHH
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHc---CCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHHH
Confidence 468999999999999999999999999999999999999 4455554332 1234569999999999
Q ss_pred HHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 010820 443 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 443 l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
+++++++ |++|+||||+.+|+.+|+++|+.+++
T Consensus 254 ~~~lgi~-~~~~v~vGDs~nDi~~a~~aG~~va~ 286 (335)
T 3n28_A 254 AQQYDVE-IHNTVAVGDGANDLVMMAAAGLGVAY 286 (335)
T ss_dssp HHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHHcCCC-hhhEEEEeCCHHHHHHHHHCCCeEEe
Confidence 9999998 99999999999999999999998777
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.61 E-value=4.5e-16 Score=144.75 Aligned_cols=100 Identities=13% Similarity=0.142 Sum_probs=81.8
Q ss_pred HHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhh
Q 010820 384 ALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQE 463 (500)
Q Consensus 384 ~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~D 463 (500)
+|+.|+++|++++|+||.........++.+ ++..+|.. .||+++.++.++++++++ |++|+||||+.+|
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~l---gi~~~f~~-------~k~K~~~l~~~~~~lg~~-~~~~~~vGDs~nD 152 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTL---GITHLYQG-------QSDKLVAYHELLATLQCQ-PEQVAYIGDDLID 152 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHH---TCCEEECS-------CSSHHHHHHHHHHHHTCC-GGGEEEEECSGGG
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHc---CCchhhcc-------cCChHHHHHHHHHHcCcC-cceEEEEcCCHHH
Confidence 899999999999999999999999999988 55555543 299999999999999998 9999999999999
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCc
Q 010820 464 ATAAKAAGLEVVISIRPGNGPLPENHGFKTINSF 497 (500)
Q Consensus 464 i~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l 497 (500)
+.+++++|+.++..+ ..+.....+++++.+.
T Consensus 153 i~~~~~ag~~~a~~~---~~~~~~~~Ad~v~~~~ 183 (211)
T 3ij5_A 153 WPVMAQVGLSVAVAD---AHPLLLPKAHYVTRIK 183 (211)
T ss_dssp HHHHTTSSEEEECTT---SCTTTGGGSSEECSSC
T ss_pred HHHHHHCCCEEEeCC---ccHHHHhhCCEEEeCC
Confidence 999999998766433 1222223347777664
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=8.3e-16 Score=139.45 Aligned_cols=106 Identities=10% Similarity=0.119 Sum_probs=85.3
Q ss_pred CCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEEEEe
Q 010820 379 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVT 458 (500)
Q Consensus 379 pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VG 458 (500)
+...++|+.|+++|++++++||++...+...++.+ ++..+|+ ..||+++.|..++++++++ |++|+|||
T Consensus 38 ~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~l---gl~~~~~-------~~k~k~~~~~~~~~~~~~~-~~~~~~vG 106 (180)
T 1k1e_A 38 VRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADL---GIKLFFL-------GKLEKETACFDLMKQAGVT-AEQTAYIG 106 (180)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHH---TCCEEEE-------SCSCHHHHHHHHHHHHTCC-GGGEEEEE
T ss_pred cchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHc---CCceeec-------CCCCcHHHHHHHHHHcCCC-HHHEEEEC
Confidence 34457999999999999999999999999999888 4444442 2599999999999999998 99999999
Q ss_pred CCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCcc
Q 010820 459 DVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFA 498 (500)
Q Consensus 459 Ds~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~ 498 (500)
|+.+|+.+++++|+.++..+. .+.....+++++.+..
T Consensus 107 D~~~Di~~~~~ag~~~~~~~~---~~~~~~~ad~v~~~~~ 143 (180)
T 1k1e_A 107 DDSVDLPAFAACGTSFAVADA---PIYVKNAVDHVLSTHG 143 (180)
T ss_dssp CSGGGHHHHHHSSEEEECTTS---CHHHHTTSSEECSSCT
T ss_pred CCHHHHHHHHHcCCeEEeCCc---cHHHHhhCCEEecCCC
Confidence 999999999999998775432 1122233477777653
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=6.9e-16 Score=137.56 Aligned_cols=84 Identities=18% Similarity=0.192 Sum_probs=75.1
Q ss_pred HHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhh
Q 010820 384 ALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQE 463 (500)
Q Consensus 384 ~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~D 463 (500)
+|+.|+++|++++|+||++...+...++++ ++..+|+. .||+|++|..++++++++ |++|+||||+.+|
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~---gl~~~~~~-------~kpk~~~~~~~~~~~~~~-~~~~~~vGD~~~D 107 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKL---KVDYLFQG-------VVDKLSAAEELCNELGIN-LEQVAYIGDDLND 107 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHT---TCSEEECS-------CSCHHHHHHHHHHHHTCC-GGGEEEECCSGGG
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHc---CCCEeecc-------cCChHHHHHHHHHHcCCC-HHHEEEECCCHHH
Confidence 899999999999999999999999999888 45555432 399999999999999998 9999999999999
Q ss_pred HHHHHHcCCcEEEEc
Q 010820 464 ATAAKAAGLEVVISI 478 (500)
Q Consensus 464 i~aA~~aG~~~i~v~ 478 (500)
+.+|+++|+.++..+
T Consensus 108 i~~~~~ag~~~~~~~ 122 (164)
T 3e8m_A 108 AKLLKRVGIAGVPAS 122 (164)
T ss_dssp HHHHTTSSEEECCTT
T ss_pred HHHHHHCCCeEEcCC
Confidence 999999999777643
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.58 E-value=4.7e-16 Score=142.25 Aligned_cols=113 Identities=16% Similarity=0.067 Sum_probs=86.2
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cc-cccCCCCHHHHHHHHHHcCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DT-AVGNKRETPSYVEITNSLGVDK 450 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~-~~~~KP~p~~~~~~l~~l~v~~ 450 (500)
...++||+.++|+.|+++|++++|+||+....+... +.++ +..+++.+. +. ....+|.+.....+++++ +
T Consensus 77 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l--~- 149 (201)
T 4ap9_A 77 KVNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELG---DEFMANRAIFEDGKFQGIRLRFRDKGEFLKRF--R- 149 (201)
T ss_dssp GCCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTS---SEEEEEEEEEETTEEEEEECCSSCHHHHHGGG--T-
T ss_pred hCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcC---chhheeeEEeeCCceECCcCCccCHHHHHHhc--C-
Confidence 347899999999999999999999999998888888 8884 444433222 11 222566666677788887 6
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 451 PSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 451 p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
|++|+||||+.+|+.+|+++|+. +.+..+.. .++++++|+.||
T Consensus 150 ~~~~i~iGD~~~Di~~~~~ag~~-v~~~~~~~------~ad~v~~~~~el 192 (201)
T 4ap9_A 150 DGFILAMGDGYADAKMFERADMG-IAVGREIP------GADLLVKDLKEL 192 (201)
T ss_dssp TSCEEEEECTTCCHHHHHHCSEE-EEESSCCT------TCSEEESSHHHH
T ss_pred cCcEEEEeCCHHHHHHHHhCCce-EEECCCCc------cccEEEccHHHH
Confidence 99999999999999999999997 45543322 458899887653
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.58 E-value=7.6e-16 Score=148.39 Aligned_cols=119 Identities=14% Similarity=0.136 Sum_probs=91.2
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHH--HHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQ--RLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDK 450 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~--~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~ 450 (500)
..+||++.++|+.|+ +|+++ |+||+..... ...+... .++..+|+..+ +....+||+|++|+.++++ ++
T Consensus 129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~~~~l~~~--~~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~--~~- 201 (263)
T 1zjj_A 129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPGEEGIYPGA--GSIIAALKVATNVEPIIIGKPNEPMYEVVREM--FP- 201 (263)
T ss_dssp TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECH--HHHHHHHHHHHCCCCEECSTTSHHHHHHHHHH--ST-
T ss_pred CCCHHHHHHHHHHHH-CCCEE-EEECCCccccCCCCCcCCc--HHHHHHHHHHhCCCccEecCCCHHHHHHHHHh--CC-
Confidence 467899999999999 89988 9999886443 2222220 14455666655 3345689999999999999 87
Q ss_pred CCcEEEEeCCH-hhHHHHHHcCCcEEEEcCCCCCC-CCCC---CCceeeCCccCC
Q 010820 451 PSEILFVTDVY-QEATAAKAAGLEVVISIRPGNGP-LPEN---HGFKTINSFAEI 500 (500)
Q Consensus 451 p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~-~~~~---~~~~~i~~l~el 500 (500)
|++|+||||+. +|+.+|+++|+.+++|.++.... .... .++++++++.||
T Consensus 202 ~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el 256 (263)
T 1zjj_A 202 GEELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYEL 256 (263)
T ss_dssp TCEEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGGG
T ss_pred cccEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHH
Confidence 99999999996 99999999999999999874322 2221 358999999875
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.57 E-value=2.1e-15 Score=136.29 Aligned_cols=82 Identities=15% Similarity=0.232 Sum_probs=72.7
Q ss_pred HHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhh
Q 010820 384 ALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQE 463 (500)
Q Consensus 384 ~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~D 463 (500)
+|+.|+++|++++|+||+....+..+++.++ +. +|.. .||+++.+..++++++++ +++|+||||+.+|
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lg---i~-~~~~-------~~~k~~~l~~~~~~~~~~-~~~~~~vGD~~nD 114 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLK---IP-VLHG-------IDRKDLALKQWCEEQGIA-PERVLYVGNDVND 114 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHT---CC-EEES-------CSCHHHHHHHHHHHHTCC-GGGEEEEECSGGG
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcC---Ce-eEeC-------CCChHHHHHHHHHHcCCC-HHHEEEEcCCHHH
Confidence 8999999999999999999999999999884 33 3321 399999999999999998 9999999999999
Q ss_pred HHHHHHcCCcEEEE
Q 010820 464 ATAAKAAGLEVVIS 477 (500)
Q Consensus 464 i~aA~~aG~~~i~v 477 (500)
+.+++++|+.++..
T Consensus 115 ~~~~~~ag~~v~~~ 128 (176)
T 3mmz_A 115 LPCFALVGWPVAVA 128 (176)
T ss_dssp HHHHHHSSEEEECT
T ss_pred HHHHHHCCCeEECC
Confidence 99999999876543
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=3.4e-15 Score=153.25 Aligned_cols=96 Identities=13% Similarity=0.247 Sum_probs=81.2
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCc------------HHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHH
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGS------------RLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEI 442 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~------------~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~ 442 (500)
++||+.++|+.|+++|++++|+||.. ...+...++.++ + .|+.++ +.....||+|++|+.+
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lg---l--~fd~i~~~~~~~~~KP~p~~~~~a 162 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLG---V--PFQVLVATHAGLNRKPVSGMWDHL 162 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHT---S--CCEEEEECSSSTTSTTSSHHHHHH
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcC---C--CEEEEEECCCCCCCCCCHHHHHHH
Confidence 79999999999999999999999966 223677787774 3 255555 4466789999999999
Q ss_pred HHHcC----CCCCCcEEEEeCCH-----------------hhHHHHHHcCCcEEEEc
Q 010820 443 TNSLG----VDKPSEILFVTDVY-----------------QEATAAKAAGLEVVISI 478 (500)
Q Consensus 443 l~~l~----v~~p~~~l~VGDs~-----------------~Di~aA~~aG~~~i~v~ 478 (500)
+++++ ++ |++|+||||+. .|+.+|+++|+.++...
T Consensus 163 ~~~l~~~~~v~-~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~pe 218 (416)
T 3zvl_A 163 QEQANEGIPIS-VEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFATPE 218 (416)
T ss_dssp HHHSSTTCCCC-GGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEECHH
T ss_pred HHHhCCCCCCC-HHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccCcH
Confidence 99997 98 99999999997 89999999999987654
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.57 E-value=2.6e-15 Score=137.28 Aligned_cols=99 Identities=9% Similarity=0.136 Sum_probs=79.9
Q ss_pred HHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhh
Q 010820 384 ALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQE 463 (500)
Q Consensus 384 ~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~D 463 (500)
+|+.|+++|++++|+||+....+..+++.+ ++..+|+.. +++|+.+..++++++++ |++|+||||+.+|
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~l---gl~~~f~~~-------~~K~~~~~~~~~~~g~~-~~~~~~vGD~~nD 122 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSL---GIEHLFQGR-------EDKLVVLDKLLAELQLG-YEQVAYLGDDLPD 122 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHH---TCSEEECSC-------SCHHHHHHHHHHHHTCC-GGGEEEEECSGGG
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHc---CCHHHhcCc-------CChHHHHHHHHHHcCCC-hhHEEEECCCHHH
Confidence 899999999999999999999999999998 555555432 77889999999999998 9999999999999
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCC
Q 010820 464 ATAAKAAGLEVVISIRPGNGPLPENHGFKTINS 496 (500)
Q Consensus 464 i~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~ 496 (500)
+.+++++|+.++..+. .+.....+++++.+
T Consensus 123 i~~~~~ag~~~~~~~~---~~~~~~~ad~v~~~ 152 (189)
T 3mn1_A 123 LPVIRRVGLGMAVANA---ASFVREHAHGITRA 152 (189)
T ss_dssp HHHHHHSSEEEECTTS---CHHHHHTSSEECSS
T ss_pred HHHHHHCCCeEEeCCc---cHHHHHhCCEEecC
Confidence 9999999997654321 11122233666665
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=3.8e-16 Score=150.80 Aligned_cols=120 Identities=13% Similarity=0.121 Sum_probs=89.9
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHH---HHhccCcccccccccccc--cc-cccCCCCHHHHHHHHHHcCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRL---IFGNSNYGDLRKYLSGFF--DT-AVGNKRETPSYVEITNSLGV 448 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~---~l~~~~~~~l~~~f~~~~--d~-~~~~KP~p~~~~~~l~~l~v 448 (500)
..+++++.++++.| ..|+++ ++||........ .++.. ++..+|+..+ +. ....||+|.+|+.+++++++
T Consensus 136 ~~~~~~~~~~l~~l-~~~~~~-i~tn~~~~~~~~~~~~~~~~---~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi 210 (271)
T 1vjr_A 136 TLTYERLKKACILL-RKGKFY-IATHPDINCPSKEGPVPDAG---SIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGV 210 (271)
T ss_dssp TCCHHHHHHHHHHH-TTTCEE-EESCCCSEECCTTSCEECHH---HHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTC
T ss_pred CcCHHHHHHHHHHH-HCCCeE-EEECCCccccCCCCcccccc---HHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhCC
Confidence 35678999999999 789988 999976532221 11111 3344455444 33 56789999999999999999
Q ss_pred CCCCcEEEEeCCH-hhHHHHHHcCCcEEEEcCCCCCC-CCC---CCCceeeCCccCC
Q 010820 449 DKPSEILFVTDVY-QEATAAKAAGLEVVISIRPGNGP-LPE---NHGFKTINSFAEI 500 (500)
Q Consensus 449 ~~p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~-~~~---~~~~~~i~~l~el 500 (500)
+ |++|+||||+. +|+++|+++|+.++++.++.... ... ..++++++++.||
T Consensus 211 ~-~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el 266 (271)
T 1vjr_A 211 P-KERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGEL 266 (271)
T ss_dssp C-GGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHH
T ss_pred C-CceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhcCCCCCEEECCHHHH
Confidence 8 99999999995 99999999999999999874332 111 2358999998764
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.56 E-value=3e-15 Score=144.24 Aligned_cols=121 Identities=12% Similarity=0.050 Sum_probs=81.2
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCCcE
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSEI 454 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~~~ 454 (500)
.++++.+.+..++ .|. ..++||.............+.+++..+|+..+ +.....||+|.+|+.++++++++ |+++
T Consensus 126 ~~~~~~~~~~~l~-~~~-~~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~-~~~~ 202 (264)
T 3epr_A 126 TYDKLATATLAIQ-NGA-LFIGTNPDLNIPTERGLLPGAGSLNALLEAATRIKPVFIGKPNAIIMNKALEILNIP-RNQA 202 (264)
T ss_dssp CHHHHHHHHHHHH-TTC-EEEESCCCSEEEETTEEEECHHHHHHHHHHHHSCCCEECSTTSHHHHHHHHHHHTSC-GGGE
T ss_pred CHHHHHHHHHHHH-CCC-eEEEEcCCccccCCCceecCccHHHHHHHHHhCCCcccCCCCCHHHHHHHHHHhCcC-cccE
Confidence 3455666666663 455 44677754311100000000112233344433 33566899999999999999998 9999
Q ss_pred EEEeCC-HhhHHHHHHcCCcEEEEcCCCCC-CCCCC---CCceeeCCccCC
Q 010820 455 LFVTDV-YQEATAAKAAGLEVVISIRPGNG-PLPEN---HGFKTINSFAEI 500 (500)
Q Consensus 455 l~VGDs-~~Di~aA~~aG~~~i~v~~~~~~-~~~~~---~~~~~i~~l~el 500 (500)
+||||+ .+|+.+|+++|+.+++|.++... ..... .++++++++.||
T Consensus 203 ~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~pd~~~~~l~~l 253 (264)
T 3epr_A 203 VMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEW 253 (264)
T ss_dssp EEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGGCSSCCSEEESCGGGC
T ss_pred EEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHH
Confidence 999999 69999999999999999998433 33332 459999999886
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=4.7e-16 Score=153.35 Aligned_cols=122 Identities=14% Similarity=0.136 Sum_probs=94.4
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHH--H-HHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQ--R-LIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVD 449 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~--~-~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~ 449 (500)
..++|++.++|+.|++.|+ ++++||...... . ..+..++ .+..+|+..+ +.....||+|.+|..++++++++
T Consensus 155 ~~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~~g--~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgi~ 231 (306)
T 2oyc_A 155 HFSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPGTG--SLAAAVETASGRQALVVGKPSPYMFECITENFSID 231 (306)
T ss_dssp TCCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEECHH--HHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSCCC
T ss_pred CCCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCCCc--HHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcCCC
Confidence 4578999999999999999 999999886543 1 2232321 1455565555 33567899999999999999998
Q ss_pred CCCcEEEEeCCH-hhHHHHHHcCCcEEEEcCCCCCC-CC---------CCCCceeeCCccCC
Q 010820 450 KPSEILFVTDVY-QEATAAKAAGLEVVISIRPGNGP-LP---------ENHGFKTINSFAEI 500 (500)
Q Consensus 450 ~p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~-~~---------~~~~~~~i~~l~el 500 (500)
|++|+||||+. +|+++|+++|+.+++|.++.... .. ...++++++++.||
T Consensus 232 -~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el 292 (306)
T 2oyc_A 232 -PARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADL 292 (306)
T ss_dssp -GGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGG
T ss_pred -hHHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHH
Confidence 99999999996 99999999999999999874432 11 12359999999875
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=5.1e-15 Score=135.23 Aligned_cols=101 Identities=12% Similarity=0.135 Sum_probs=82.7
Q ss_pred HHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhh
Q 010820 384 ALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQE 463 (500)
Q Consensus 384 ~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~D 463 (500)
+|+.|+++|++++|+||++.......++.+ ++..+|. ..||++++|.+++++++++ |++|+||||+.+|
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~l---gl~~~~~-------~~kpk~~~~~~~~~~~g~~-~~~~~~iGD~~~D 129 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATL---GITHLYQ-------GQSNKLIAFSDLLEKLAIA-PENVAYVGDDLID 129 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHH---TCCEEEC-------SCSCSHHHHHHHHHHHTCC-GGGEEEEESSGGG
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHc---CCceeec-------CCCCCHHHHHHHHHHcCCC-HHHEEEECCCHHH
Confidence 899999999999999999999999999888 4444443 2599999999999999998 9999999999999
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCcc
Q 010820 464 ATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFA 498 (500)
Q Consensus 464 i~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~ 498 (500)
+.+|+++|+.+++.+. .+.....+++++++..
T Consensus 130 i~~a~~ag~~~~~~~~---~~~~~~~ad~v~~~~~ 161 (188)
T 2r8e_A 130 WPVMEKVGLSVAVADA---HPLLIPRADYVTRIAG 161 (188)
T ss_dssp HHHHTTSSEEEECTTS---CTTTGGGSSEECSSCT
T ss_pred HHHHHHCCCEEEecCc---CHHHHhcCCEEEeCCC
Confidence 9999999998865432 1222233478887763
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=4.8e-16 Score=149.88 Aligned_cols=111 Identities=18% Similarity=0.237 Sum_probs=88.9
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCc
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 453 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~ 453 (500)
..+++||+.++|+.|+++|++++++||++...+..+++.+ ++..+|+..+ |+.+..++++++.+ |++
T Consensus 134 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~---gl~~~f~~~~---------p~~k~~~~~~l~~~-~~~ 200 (263)
T 2yj3_A 134 SDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKEL---NIQEYYSNLS---------PEDKVRIIEKLKQN-GNK 200 (263)
Confidence 3579999999999999999999999999999999999988 5566665433 45678899999998 999
Q ss_pred EEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceee--CCccCC
Q 010820 454 ILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTI--NSFAEI 500 (500)
Q Consensus 454 ~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i--~~l~el 500 (500)
|+||||+.+|+.+++++|+...+. .........+++++ +++.+|
T Consensus 201 ~~~VGD~~~D~~aa~~Agv~va~g---~~~~~~~~~ad~v~~~~~l~~l 246 (263)
T 2yj3_A 201 VLMIGDGVNDAAALALADVSVAMG---NGVDISKNVADIILVSNDIGTL 246 (263)
Confidence 999999999999999999765443 22222223348888 887764
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.54 E-value=2.7e-15 Score=143.97 Aligned_cols=119 Identities=13% Similarity=0.111 Sum_probs=84.0
Q ss_pred cCCCHHHHHHHHHhC-CcEEEEEcCCcHHHHHHHHhccCccccccccc---ccc--cccccCCCCHHHHHHHHHHcCCCC
Q 010820 377 VFDDVPEALEKWHSL-GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS---GFF--DTAVGNKRETPSYVEITNSLGVDK 450 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~-G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~---~~~--d~~~~~KP~p~~~~~~l~~l~v~~ 450 (500)
.++++.++++.|++. |+++ ++||.........+... ++..+|. ..+ +.....||+|.+|..+++++|++
T Consensus 132 ~~~~~~~~l~~l~~~~~~~~-i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~- 206 (271)
T 2x4d_A 132 SYQNMNNAFQVLMELEKPVL-ISLGKGRYYAATSGLML---DVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVE- 206 (271)
T ss_dssp CHHHHHHHHHHHHHCSSCCE-EEECCCSEEEETTEEEE---CHHHHHHHHHHHHTCCCEEESTTCHHHHHHHHHHHTCC-
T ss_pred CHHHHHHHHHHHHhcCCCeE-EEEcCCcccccCCCccc---ChhHHHHHHHHHhCCceeeccCCCHHHHHHHHHHhCCC-
Confidence 356778888888887 8887 77765543222222222 2222222 111 33456899999999999999998
Q ss_pred CCcEEEEeCCH-hhHHHHHHcCCcEEEEcCCCC-CCC-CC--CCCceeeCCccCC
Q 010820 451 PSEILFVTDVY-QEATAAKAAGLEVVISIRPGN-GPL-PE--NHGFKTINSFAEI 500 (500)
Q Consensus 451 p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~-~~~-~~--~~~~~~i~~l~el 500 (500)
|++|++|||+. +|+.+|+++|+.+++|.++.. ... .. ..++++++++.||
T Consensus 207 ~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~el 261 (271)
T 2x4d_A 207 AHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYVDNLAEA 261 (271)
T ss_dssp GGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGCSSCCCSEEESSHHHH
T ss_pred cceEEEECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhcccCCCCCEEeCCHHHH
Confidence 99999999998 999999999999999998732 222 21 2348999998764
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.51 E-value=3.2e-15 Score=145.98 Aligned_cols=108 Identities=16% Similarity=0.201 Sum_probs=84.7
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcE
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 454 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~ 454 (500)
..++||+.++|+.|+++|++++|+||++...+...++.+ ++..+|+.++ |. ....+++++++. ++|
T Consensus 162 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~---gl~~~f~~i~-------~~--~K~~~~~~l~~~--~~~ 227 (287)
T 3a1c_A 162 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL---NLDLVIAEVL-------PH--QKSEEVKKLQAK--EVV 227 (287)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH---TCSEEECSCC-------TT--CHHHHHHHHTTT--CCE
T ss_pred cccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh---CCceeeeecC-------hH--HHHHHHHHHhcC--CeE
Confidence 579999999999999999999999999999999999988 5566665443 22 226788999985 899
Q ss_pred EEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceee--CCccC
Q 010820 455 LFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTI--NSFAE 499 (500)
Q Consensus 455 l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i--~~l~e 499 (500)
+||||+.+|+.+|+++|+.. .+.. . .+.....+++++ +++.+
T Consensus 228 ~~vGDs~~Di~~a~~ag~~v-~~~~-~-~~~~~~~ad~v~~~~~~~~ 271 (287)
T 3a1c_A 228 AFVGDGINDAPALAQADLGI-AVGS-G-SDVAVESGDIVLIRDDLRD 271 (287)
T ss_dssp EEEECTTTCHHHHHHSSEEE-EECC-C-SCCSSCCSSEEESSSCTHH
T ss_pred EEEECCHHHHHHHHHCCeeE-EeCC-C-CHHHHhhCCEEEeCCCHHH
Confidence 99999999999999999973 3322 1 122233458898 87765
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.51 E-value=4e-14 Score=129.90 Aligned_cols=84 Identities=12% Similarity=0.214 Sum_probs=74.2
Q ss_pred HHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHh
Q 010820 383 EALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQ 462 (500)
Q Consensus 383 ~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~ 462 (500)
..|+.|+++|++++|+||+....+..+++.+ ++..+|.. .||++..+..++++++++ |++|+||||+.+
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~l---gi~~~~~~-------~k~k~~~~~~~~~~~~~~-~~~~~~vGD~~n 127 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKAL---GISLIYQG-------QDDKVQAYYDICQKLAIA-PEQTGYIGDDLI 127 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHT---TCCEEECS-------CSSHHHHHHHHHHHHCCC-GGGEEEEESSGG
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHc---CCcEEeeC-------CCCcHHHHHHHHHHhCCC-HHHEEEEcCCHH
Confidence 3689999999999999999999999999998 44544432 399999999999999998 999999999999
Q ss_pred hHHHHHHcCCcEEEE
Q 010820 463 EATAAKAAGLEVVIS 477 (500)
Q Consensus 463 Di~aA~~aG~~~i~v 477 (500)
|+.+++++|+.++..
T Consensus 128 Di~~~~~ag~~va~~ 142 (195)
T 3n07_A 128 DWPVMEKVALRVCVA 142 (195)
T ss_dssp GHHHHTTSSEEEECT
T ss_pred HHHHHHHCCCEEEEC
Confidence 999999999876543
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.51 E-value=2.3e-14 Score=131.16 Aligned_cols=82 Identities=17% Similarity=0.345 Sum_probs=73.4
Q ss_pred HHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhh
Q 010820 384 ALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQE 463 (500)
Q Consensus 384 ~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~D 463 (500)
.|+.|+++|++++|+||++...+...++.+ ++..+|+. .||+|+.|..++++++++ |++|+||||+.+|
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~l---gl~~~~~~-------~kpk~~~~~~~~~~~~~~-~~~~~~vGD~~~D 122 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQL---GITHYYKG-------QVDKRSAYQHLKKTLGLN-DDEFAYIGDDLPD 122 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHH---TCCEEECS-------CSSCHHHHHHHHHHHTCC-GGGEEEEECSGGG
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHc---CCccceeC-------CCChHHHHHHHHHHhCCC-HHHEEEECCCHHH
Confidence 689999999999999999999999999888 44554432 399999999999999998 9999999999999
Q ss_pred HHHHHHcCCcEEE
Q 010820 464 ATAAKAAGLEVVI 476 (500)
Q Consensus 464 i~aA~~aG~~~i~ 476 (500)
+.+++++|+.++.
T Consensus 123 i~~~~~ag~~~~~ 135 (191)
T 3n1u_A 123 LPLIQQVGLGVAV 135 (191)
T ss_dssp HHHHHHSSEEEEC
T ss_pred HHHHHHCCCEEEe
Confidence 9999999998743
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=1.6e-15 Score=146.67 Aligned_cols=107 Identities=14% Similarity=0.180 Sum_probs=75.8
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEE
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 455 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l 455 (500)
.++||+.++|+.|+++|++++|+||+....+...++.+ ++..+|+.++.. .+........+ +-+|+
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~---gl~~~f~~~~~~-----~k~~~~k~~~~------~~~~~ 209 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEEL---GLDDYFAEVLPH-----EKAEKVKEVQQ------KYVTA 209 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH---TCSEEECSCCGG-----GHHHHHHHHHT------TSCEE
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc---CChhHhHhcCHH-----HHHHHHHHHHh------cCCEE
Confidence 68999999999999999999999999999999999998 566666655511 12222222221 33789
Q ss_pred EEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceee--CCccC
Q 010820 456 FVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTI--NSFAE 499 (500)
Q Consensus 456 ~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i--~~l~e 499 (500)
||||+.+|+.+++++|+ .+.++...+......++++ +++.+
T Consensus 210 ~vGD~~nDi~~~~~Ag~---~va~~~~~~~~~~~a~~~~~~~~~~~ 252 (280)
T 3skx_A 210 MVGDGVNDAPALAQADV---GIAIGAGTDVAVETADIVLVRNDPRD 252 (280)
T ss_dssp EEECTTTTHHHHHHSSE---EEECSCCSSSCCCSSSEECSSCCTHH
T ss_pred EEeCCchhHHHHHhCCc---eEEecCCcHHHHhhCCEEEeCCCHHH
Confidence 99999999999999996 4444432223233345555 66654
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.49 E-value=1.3e-14 Score=139.78 Aligned_cols=121 Identities=21% Similarity=0.163 Sum_probs=79.2
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cc-cccCCCCHHHHHHHHHHcCCCCCCc
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DT-AVGNKRETPSYVEITNSLGVDKPSE 453 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~-~~~~KP~p~~~~~~l~~l~v~~p~~ 453 (500)
.++.+.+.+..+++ |. ..++||.............+.+.+...|.... +. ....||+|.+|+.++++++++ |++
T Consensus 130 ~~~~~~~~~~~l~~-~~-~~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~-~~~ 206 (268)
T 3qgm_A 130 NFELMTKALRACLR-GI-RYIATNPDRIFPAEDGPIPGTGMIIGALYWMTGREPDVVVGKPSEVIMREALDILGLD-AKD 206 (268)
T ss_dssp BHHHHHHHHHHHHH-TC-EEEESCCCCEEEETTEEEECTHHHHHHHHHHHSCCCSEECSTTSHHHHHHHHHHHTCC-GGG
T ss_pred CHHHHHHHHHHHhC-CC-cEEEEeCCCcccCCCCceeChHHHHHHHHHHhCCCcceecCCCCHHHHHHHHHHhCCC-chh
Confidence 34556666666664 44 45667654321110000010011122222222 23 456899999999999999998 999
Q ss_pred EEEEeCC-HhhHHHHHHcCCcEEEEcCCCCCCCCCC--------CCceeeCCccCC
Q 010820 454 ILFVTDV-YQEATAAKAAGLEVVISIRPGNGPLPEN--------HGFKTINSFAEI 500 (500)
Q Consensus 454 ~l~VGDs-~~Di~aA~~aG~~~i~v~~~~~~~~~~~--------~~~~~i~~l~el 500 (500)
|+||||+ .+|+.+|+++|+.+++|.++........ .++++++++.||
T Consensus 207 ~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~el 262 (268)
T 3qgm_A 207 VAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKDM 262 (268)
T ss_dssp EEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHHH
T ss_pred EEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEECCHHHH
Confidence 9999999 5999999999999999998854333221 459999998764
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.47 E-value=3.9e-14 Score=136.40 Aligned_cols=122 Identities=18% Similarity=0.139 Sum_probs=82.0
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCCc
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSE 453 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~~ 453 (500)
..++++.+.+..++. +. ..++||.............+..++..+|+..+ +.....||++.+|+.++++++++ |++
T Consensus 126 ~~~~~~~~~~~~l~~-~~-~~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~-~~~ 202 (266)
T 3pdw_A 126 ITYEKFAVGCLAIRN-GA-RFISTNGDIAIPTERGLLPGNGSLTSVLTVSTGVQPVFIGKPESIIMEQAMRVLGTD-VSE 202 (266)
T ss_dssp CCHHHHHHHHHHHHT-TC-EEEESCCCCEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSSHHHHHHHHHHTCC-GGG
T ss_pred CCHHHHHHHHHHHHC-CC-eEEEEcCCceeECCCceEecchHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCC-hhh
Confidence 345667777777765 44 56777765321100000000012233344433 33566899999999999999998 999
Q ss_pred EEEEeCC-HhhHHHHHHcCCcEEEEcCCCCC-CCCCC---CCceeeCCccCC
Q 010820 454 ILFVTDV-YQEATAAKAAGLEVVISIRPGNG-PLPEN---HGFKTINSFAEI 500 (500)
Q Consensus 454 ~l~VGDs-~~Di~aA~~aG~~~i~v~~~~~~-~~~~~---~~~~~i~~l~el 500 (500)
++||||+ .+|+.+|+++|+.+++++++... +.... .++++++++.||
T Consensus 203 ~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~~~~el 254 (266)
T 3pdw_A 203 TLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAIDSLTEW 254 (266)
T ss_dssp EEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEESSGGGG
T ss_pred EEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeCCHHHH
Confidence 9999999 79999999999999999998443 33333 359999999885
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.37 E-value=3.2e-13 Score=131.69 Aligned_cols=97 Identities=8% Similarity=0.002 Sum_probs=78.6
Q ss_pred ccCCCHHHHHHHHHhC-CcEEEEEcCC---------------------cHHHHHHHHhccCccccccccccc--------
Q 010820 376 EVFDDVPEALEKWHSL-GTKVYIYSSG---------------------SRLAQRLIFGNSNYGDLRKYLSGF-------- 425 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~-G~~l~v~Tn~---------------------~~~~~~~~l~~~~~~~l~~~f~~~-------- 425 (500)
.+++++.++|+.|+++ |+++++.|+. ........++.+ ++..+|...
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---g~~~~~~~~~~~~~~~~ 198 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEY---GVSVNINRCNPLAGDPE 198 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHH---TEEEEEEECCGGGTCCT
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHc---CCCEEEEEccccccCCC
Confidence 4678999999999988 9999999987 556666777777 444444322
Q ss_pred ---c-cccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 010820 426 ---F-DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 426 ---~-d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
+ +.....+|++..+..++++++++ |++|+||||+.+|+.+++.+|+.+++
T Consensus 199 ~~~~~~~~~~~~~k~~~~~~~~~~~~~~-~~~~~~~GDs~~D~~~~~~ag~~~~~ 252 (289)
T 3gyg_A 199 DSYDVDFIPIGTGKNEIVTFMLEKYNLN-TERAIAFGDSGNDVRMLQTVGNGYLL 252 (289)
T ss_dssp TEEEEEEEESCCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHTTSSEEEEC
T ss_pred CceEEEEEeCCCCHHHHHHHHHHHcCCC-hhhEEEEcCCHHHHHHHHhCCcEEEE
Confidence 2 44566799999999999999998 99999999999999999999965443
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.35 E-value=3.3e-12 Score=115.38 Aligned_cols=99 Identities=11% Similarity=0.130 Sum_probs=65.8
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCC---cH--HHHHHHHhc-cCcccccccccccccccccCCCCHHHHHHHHHHcC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSG---SR--LAQRLIFGN-SNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLG 447 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~---~~--~~~~~~l~~-~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~ 447 (500)
..+++||+.++|+.|++. ++++|+||+ .. ......++. + ++..+++.++.. .+ . ++
T Consensus 67 ~~~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f---~~~~~~~~i~~~---~~---~-------~l- 128 (180)
T 3bwv_A 67 NLDVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYF---PFLDPQHFVFCG---RK---N-------II- 128 (180)
T ss_dssp SCCBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHC---TTSCGGGEEECS---CG---G-------GB-
T ss_pred cCCCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHc---CCCCcccEEEeC---Cc---C-------ee-
Confidence 467999999999999985 999999998 32 122333433 3 223334444411 11 0 11
Q ss_pred CCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 448 VDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 448 v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
++|+||||++.|+. .++| .++++.++.+.. ..++++++++.||
T Consensus 129 ----~~~l~ieDs~~~i~--~aaG-~~i~~~~~~~~~---~~~~~~i~~~~el 171 (180)
T 3bwv_A 129 ----LADYLIDDNPKQLE--IFEG-KSIMFTASHNVY---EHRFERVSGWRDV 171 (180)
T ss_dssp ----CCSEEEESCHHHHH--HCSS-EEEEECCGGGTT---CCSSEEECSHHHH
T ss_pred ----cccEEecCCcchHH--HhCC-CeEEeCCCcccC---CCCceecCCHHHH
Confidence 47899999999995 4589 999998764432 2347889888763
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.3e-12 Score=116.60 Aligned_cols=81 Identities=15% Similarity=0.184 Sum_probs=67.0
Q ss_pred HHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhh
Q 010820 384 ALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQE 463 (500)
Q Consensus 384 ~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~D 463 (500)
.|+.|+++|++++|+||. ......++.+.+ ++. + | ...+++++.+..++++++++ |++|+||||+.+|
T Consensus 44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~l-gi~-~----~---~g~~~K~~~l~~~~~~~gi~-~~~~~~vGD~~nD 111 (168)
T 3ewi_A 44 GISLLKKSGIEVRLISER--ACSKQTLSALKL-DCK-T----E---VSVSDKLATVDEWRKEMGLC-WKEVAYLGNEVSD 111 (168)
T ss_dssp HHHHHHHTTCEEEEECSS--CCCHHHHHTTCC-CCC-E----E---CSCSCHHHHHHHHHHHTTCC-GGGEEEECCSGGG
T ss_pred HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCC-CcE-E----E---ECCCChHHHHHHHHHHcCcC-hHHEEEEeCCHhH
Confidence 799999999999999999 667777873311 332 3 2 12478999999999999998 9999999999999
Q ss_pred HHHHHHcCCcEEE
Q 010820 464 ATAAKAAGLEVVI 476 (500)
Q Consensus 464 i~aA~~aG~~~i~ 476 (500)
+.+++++|+.++.
T Consensus 112 i~~~~~ag~~~a~ 124 (168)
T 3ewi_A 112 EECLKRVGLSAVP 124 (168)
T ss_dssp HHHHHHSSEEEEC
T ss_pred HHHHHHCCCEEEe
Confidence 9999999998653
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=99.27 E-value=8.7e-12 Score=119.29 Aligned_cols=97 Identities=19% Similarity=0.147 Sum_probs=70.8
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCc---HHHHHHHHhccCccccc--ccccccccccccCCCCHHHHHHHHHHcCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGS---RLAQRLIFGNSNYGDLR--KYLSGFFDTAVGNKRETPSYVEITNSLGVD 449 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~---~~~~~~~l~~~~~~~l~--~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~ 449 (500)
.+++||+.++|+.|+++|++++|+||++ ...+...++.+| +. .+|+-++......||.+ +..++ ..+..
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~G---l~~v~~~~vi~~~~~~~K~~~--~~~~~-~~~~~ 173 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVG---APQATKEHILLQDPKEKGKEK--RRELV-SQTHD 173 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHT---CSSCSTTTEEEECTTCCSSHH--HHHHH-HHHEE
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcC---CCcCCCceEEECCCCCCCcHH--HHHHH-HhCCC
Confidence 5689999999999999999999999998 667777788874 33 33433332212245543 44433 33443
Q ss_pred CCCcEEEEeCCHhhHHHH-------HH---------cCCcEEEEcCC
Q 010820 450 KPSEILFVTDVYQEATAA-------KA---------AGLEVVISIRP 480 (500)
Q Consensus 450 ~p~~~l~VGDs~~Di~aA-------~~---------aG~~~i~v~~~ 480 (500)
.|+||||+.+|+.+| ++ +|+.++.+.++
T Consensus 174 ---~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~ 217 (258)
T 2i33_A 174 ---IVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNP 217 (258)
T ss_dssp ---EEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCC
T ss_pred ---ceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCC
Confidence 599999999999999 35 89999999776
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=99.27 E-value=3.6e-12 Score=125.03 Aligned_cols=99 Identities=12% Similarity=-0.002 Sum_probs=80.8
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHH---HHHHHhc--------cCcccccccccccc--cccccCCCCHHHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLA---QRLIFGN--------SNYGDLRKYLSGFF--DTAVGNKRETPSYVE 441 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~---~~~~l~~--------~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~ 441 (500)
..+|||+.++|+.|+++|++++|+||..... ....++. + ++ .|+..+ +. ...||+|+++..
T Consensus 187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~---~~--~~~~~~~~~~-~~~kp~p~~~~~ 260 (301)
T 1ltq_A 187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIA---GV--PLVMQCQREQ-GDTRKDDVVKEE 260 (301)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTT---CC--CCSEEEECCT-TCCSCHHHHHHH
T ss_pred cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhccccccccc---CC--CchheeeccC-CCCcHHHHHHHH
Confidence 4699999999999999999999999988543 3445555 6 33 244444 22 246999999999
Q ss_pred HHHHcCCCCCC-cEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 442 ITNSLGVDKPS-EILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 442 ~l~~l~v~~p~-~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
++++++.. +. .|+||||+..|+++|+++|+.+++|.||
T Consensus 261 ~~~~~~~~-~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G 299 (301)
T 1ltq_A 261 IFWKHIAP-HFDVKLAIDDRTQVVEMWRRIGVECWQVASG 299 (301)
T ss_dssp HHHHHTTT-TCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred HHHHHhcc-ccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence 99999876 54 4799999999999999999999999987
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.22 E-value=3.6e-11 Score=116.25 Aligned_cols=68 Identities=12% Similarity=0.082 Sum_probs=50.5
Q ss_pred cccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCcc
Q 010820 427 DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFA 498 (500)
Q Consensus 427 d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~ 498 (500)
+.....++|+..++.+++++|++ ++++++|||+.||+++++.+|+ .+..+...+.....+++++.+..
T Consensus 190 ei~~~~~~K~~~l~~l~~~lgi~-~~~~i~~GD~~NDi~m~~~ag~---~vam~na~~~~k~~A~~v~~~~~ 257 (279)
T 4dw8_A 190 ELVPQGIDKALSLSVLLENIGMT-REEVIAIGDGYNDLSMIKFAGM---GVAMGNAQEPVKKAADYITLTND 257 (279)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSE---EEECTTSCHHHHHHCSEECCCGG
T ss_pred EEecCCCChHHHHHHHHHHcCCC-HHHEEEECCChhhHHHHHHcCc---EEEcCCCcHHHHHhCCEEcCCCC
Confidence 33445677899999999999998 9999999999999999999995 44434332222333467766643
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.18 E-value=2.6e-11 Score=114.18 Aligned_cols=114 Identities=13% Similarity=0.041 Sum_probs=76.7
Q ss_pred CCHHHHHHHHH-hC-CcEE-----------EEEc-CCcHHHHHHHHhccCccccccccc--ccccccccCCCCHHHHHHH
Q 010820 379 DDVPEALEKWH-SL-GTKV-----------YIYS-SGSRLAQRLIFGNSNYGDLRKYLS--GFFDTAVGNKRETPSYVEI 442 (500)
Q Consensus 379 pgv~~~L~~L~-~~-G~~l-----------~v~T-n~~~~~~~~~l~~~~~~~l~~~f~--~~~d~~~~~KP~p~~~~~~ 442 (500)
+.+.++++.++ +. |+.+ .+++ +.........++.++ +....+. ..++.....||++..+..+
T Consensus 84 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ei~~~~~~K~~~~~~~ 161 (231)
T 1wr8_A 84 DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELN--LNLVAVDSGFAIHVKKPWINKGSGIEKA 161 (231)
T ss_dssp SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTT--CSCEEEECSSCEEEECTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCHHHHHHHHHhcC--CcEEEEecCcEEEEecCCCChHHHHHHH
Confidence 56666776666 44 4433 6666 556777777776663 1111111 1124445679999999999
Q ss_pred HHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCcc
Q 010820 443 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFA 498 (500)
Q Consensus 443 l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~ 498 (500)
+++++++ ++++++|||+.+|+.+++.+|+. +.+.++. +.....+++++++..
T Consensus 162 ~~~~~~~-~~~~~~iGD~~nD~~~~~~ag~~-v~~~~~~--~~~~~~a~~v~~~~~ 213 (231)
T 1wr8_A 162 SEFLGIK-PKEVAHVGDGENDLDAFKVVGYK-VAVAQAP--KILKENADYVTKKEY 213 (231)
T ss_dssp HHHHTSC-GGGEEEEECSGGGHHHHHHSSEE-EECTTSC--HHHHTTCSEECSSCH
T ss_pred HHHcCCC-HHHEEEECCCHHHHHHHHHcCCe-EEecCCC--HHHHhhCCEEecCCC
Confidence 9999998 99999999999999999999997 4443331 222234477777654
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.08 E-value=3.1e-10 Score=110.31 Aligned_cols=117 Identities=11% Similarity=0.134 Sum_probs=71.6
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhcc-C-cccccccc--cccccccccCCCCHHHHHHHHHHcCCCCC
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS-N-YGDLRKYL--SGFFDTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~-~-~~~l~~~f--~~~~d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
.++++..+++..+....+++.+..+ .. .....++.+ . ..++.-.+ ..+++......+++..++.+++++|++ +
T Consensus 142 ~~~~~~~~~~~~~~~~~~ki~~~~~-~~-~~~~~~~~l~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~-~ 218 (290)
T 3dnp_A 142 QFVESLSDLLMDEPVSAPVIEVYTE-HD-IQHDITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLS-M 218 (290)
T ss_dssp EECSCHHHHHHHSCCCCSEEEEECC-GG-GHHHHHHHHHHHCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCC-G
T ss_pred cccCCHHHHHhcCCCCceEEEEeCC-HH-HHHHHHHHHHhhCCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCC-H
Confidence 3456777777777777777755433 22 222222221 0 00111111 112244455677999999999999998 9
Q ss_pred CcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCcc
Q 010820 452 SEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFA 498 (500)
Q Consensus 452 ~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~ 498 (500)
++|++|||+.||+++++.+|+.++.-+ ..+.....+++++.+..
T Consensus 219 ~~~i~~GD~~NDi~m~~~ag~~vam~n---a~~~~k~~Ad~v~~s~~ 262 (290)
T 3dnp_A 219 DDVVAIGHQYDDLPMIELAGLGVAMGN---AVPEIKRKADWVTRSND 262 (290)
T ss_dssp GGEEEEECSGGGHHHHHHSSEEEECTT---SCHHHHHHSSEECCCTT
T ss_pred HHEEEECCchhhHHHHHhcCCEEEecC---CcHHHHHhcCEECCCCC
Confidence 999999999999999999997544422 22222223366666544
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.2e-11 Score=113.17 Aligned_cols=93 Identities=14% Similarity=0.107 Sum_probs=79.9
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
..++||+.++|++|++. ++++|+|++.+.++..+++.+ +...+|+..+ +.....| +.|.+.++++|.+ ++
T Consensus 67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~l---d~~~~f~~~l~rd~~~~~k---~~~lK~L~~Lg~~-~~ 138 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLL---DRWGVFRARLFRESCVFHR---GNYVKDLSRLGRE-LS 138 (195)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHH---CCSSCEEEEECGGGCEEET---TEEECCGGGSSSC-GG
T ss_pred EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHh---CCcccEEEEEEcccceecC---CceeeeHhHhCCC-hh
Confidence 46889999999999998 999999999999999999999 5566676665 3333333 6789999999998 99
Q ss_pred cEEEEeCCHhhHHHHHHcCCcEE
Q 010820 453 EILFVTDVYQEATAAKAAGLEVV 475 (500)
Q Consensus 453 ~~l~VGDs~~Di~aA~~aG~~~i 475 (500)
+|++|||++.++.++.++|+..+
T Consensus 139 ~~vivDDs~~~~~~~~~ngi~i~ 161 (195)
T 2hhl_A 139 KVIIVDNSPASYIFHPENAVPVQ 161 (195)
T ss_dssp GEEEEESCGGGGTTCGGGEEECC
T ss_pred HEEEEECCHHHhhhCccCccEEe
Confidence 99999999999999999998763
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.02 E-value=3.3e-10 Score=109.46 Aligned_cols=41 Identities=24% Similarity=0.379 Sum_probs=35.6
Q ss_pred CCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcE
Q 010820 433 KRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV 474 (500)
Q Consensus 433 KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~ 474 (500)
..|+..++.++++++++ ++++++|||+.||+++++.+|+.+
T Consensus 196 ~~K~~~l~~l~~~lgi~-~~~~i~~GD~~NDi~m~~~ag~~v 236 (279)
T 3mpo_A 196 ASKGGTLSELVDQLGLT-ADDVMTLGDQGNDLTMIKYAGLGV 236 (279)
T ss_dssp CCHHHHHHHHHHHTTCC-GGGEEEC--CCTTHHHHHHSTEEC
T ss_pred CChHHHHHHHHHHcCCC-HHHEEEECCchhhHHHHHhcCcee
Confidence 34899999999999998 999999999999999999999643
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.99 E-value=2.9e-09 Score=102.06 Aligned_cols=68 Identities=18% Similarity=0.153 Sum_probs=51.0
Q ss_pred cccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCcc
Q 010820 427 DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFA 498 (500)
Q Consensus 427 d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~ 498 (500)
+......+|+..++.++++++++ ++++++|||+.||+++++.+|+..+. +...+.....+++++.+..
T Consensus 187 ei~~~~~~K~~~l~~l~~~lgi~-~~~~ia~GD~~NDi~m~~~ag~~vam---~na~~~~k~~Ad~v~~~~~ 254 (268)
T 3r4c_A 187 DVNVAGTSKATGLSLFADYYRVK-VSEIMACGDGGNDIPMLKAAGIGVAM---GNASEKVQSVADFVTDTVD 254 (268)
T ss_dssp EEEETTCCHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHHSSEEEEC---TTSCHHHHHTCSEECCCTT
T ss_pred EEeeCCCCHHHHHHHHHHHcCCC-HHHEEEECCcHHhHHHHHhCCCeEEe---CCCcHHHHHhcCEeeCCCC
Confidence 44455677899999999999998 99999999999999999999965433 3222233334477776654
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=1.1e-10 Score=116.64 Aligned_cols=71 Identities=14% Similarity=0.062 Sum_probs=55.2
Q ss_pred ccCCCCHHHHHHHHHHc----------------------CCC----CCCcEEEEeCCH-hhHHHHHHcCCcEEEEcCCCC
Q 010820 430 VGNKRETPSYVEITNSL----------------------GVD----KPSEILFVTDVY-QEATAAKAAGLEVVISIRPGN 482 (500)
Q Consensus 430 ~~~KP~p~~~~~~l~~l----------------------~v~----~p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~ 482 (500)
..+||++.+|..+++.+ +++ ++++++||||+. +||.+|+++||.+++|.++..
T Consensus 243 ~~GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~~ 322 (352)
T 3kc2_A 243 TLGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGVY 322 (352)
T ss_dssp ECSTTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHHHTCEEEECSSSSC
T ss_pred EecCCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHHcCCEEEEEccCCC
Confidence 46799999999987764 221 379999999999 699999999999999998743
Q ss_pred CCCC---CCCCceeeCCccCC
Q 010820 483 GPLP---ENHGFKTINSFAEI 500 (500)
Q Consensus 483 ~~~~---~~~~~~~i~~l~el 500 (500)
.... ...++++++|+.||
T Consensus 323 ~~~~~~~~~~pd~vi~~l~el 343 (352)
T 3kc2_A 323 NEGDDLKECKPTLIVNDVFDA 343 (352)
T ss_dssp CTTCCCTTCCCSEECSSHHHH
T ss_pred CcccccccCCCCEEECCHHHH
Confidence 3222 22349999998764
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.97 E-value=4.3e-10 Score=108.13 Aligned_cols=68 Identities=9% Similarity=0.116 Sum_probs=51.5
Q ss_pred ccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccC
Q 010820 428 TAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE 499 (500)
Q Consensus 428 ~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e 499 (500)
.....++++..++.+++++|++ ++++++|||+.||+++++.+|+..++ +...+.....+++++++..|
T Consensus 194 i~~~~~~K~~~l~~l~~~lgi~-~~~~i~~GD~~NDi~m~~~ag~~vam---~na~~~~k~~A~~v~~~~~e 261 (274)
T 3fzq_A 194 IIQKDFHKGKAIKRLQERLGVT-QKETICFGDGQNDIVMFQASDVTIAM---KNSHQQLKDIATSICEDIFD 261 (274)
T ss_dssp EEETTCSHHHHHHHHHHHHTCC-STTEEEECCSGGGHHHHHTCSEEEEE---TTSCHHHHHHCSEEECCGGG
T ss_pred EeeCCCCHHHHHHHHHHHcCCC-HHHEEEECCChhHHHHHHhcCceEEe---cCccHHHHHhhhheeCCCch
Confidence 3455688999999999999998 99999999999999999999954443 32222223334777776543
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=98.89 E-value=1.4e-09 Score=102.02 Aligned_cols=63 Identities=6% Similarity=-0.040 Sum_probs=46.6
Q ss_pred CCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCcc
Q 010820 432 NKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFA 498 (500)
Q Consensus 432 ~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~ 498 (500)
..+|+..+..++++++++ ++++++|||+.+|+.+++.+|+. +.+..+ .+.....+++++.+..
T Consensus 151 ~~~K~~~l~~l~~~~~~~-~~~~~~iGD~~nD~~m~~~ag~~-va~~n~--~~~~k~~a~~v~~~~~ 213 (227)
T 1l6r_A 151 GEDKAFAVNKLKEMYSLE-YDEILVIGDSNNDMPMFQLPVRK-ACPANA--TDNIKAVSDFVSDYSY 213 (227)
T ss_dssp TCSHHHHHHHHHHHTTCC-GGGEEEECCSGGGHHHHTSSSEE-EECTTS--CHHHHHHCSEECSCCT
T ss_pred CCCHHHHHHHHHHHhCcC-HHHEEEECCcHHhHHHHHHcCce-EEecCc--hHHHHHhCCEEecCCC
Confidence 356888999999999998 99999999999999999999985 334322 1122223366666543
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.88 E-value=6e-10 Score=106.66 Aligned_cols=67 Identities=12% Similarity=0.086 Sum_probs=51.4
Q ss_pred cccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccC
Q 010820 429 AVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE 499 (500)
Q Consensus 429 ~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e 499 (500)
....+|++..+..++++++++ +++|++|||+.+|+.+++.+|+.+++ +...+.....+++++++..+
T Consensus 182 ~~~~~~K~~~~~~~~~~~~~~-~~~~~~iGD~~nD~~~~~~ag~~v~~---~n~~~~~~~~a~~v~~~~~~ 248 (261)
T 2rbk_A 182 TAKGDTKQKGIDEIIRHFGIK-LEETMSFGDGGNDISMLRHAAIGVAM---GQAKEDVKAAADYVTAPIDE 248 (261)
T ss_dssp ESTTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEEC---TTSCHHHHHHSSEECCCGGG
T ss_pred cCCCCChHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHcCceEEe---cCccHHHHhhCCEEeccCch
Confidence 445689999999999999998 99999999999999999999985443 22222222234778777654
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.85 E-value=2.6e-09 Score=101.95 Aligned_cols=63 Identities=10% Similarity=0.083 Sum_probs=47.6
Q ss_pred CCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccC
Q 010820 433 KRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE 499 (500)
Q Consensus 433 KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e 499 (500)
-.|...++.+++++|++ +++|++|||+.||+++++.+|+..+. +...+.....+++++.+..+
T Consensus 182 ~~K~~~l~~l~~~lgi~-~~~~ia~GDs~NDi~ml~~ag~~vam---~na~~~~k~~A~~v~~~~~~ 244 (258)
T 2pq0_A 182 GSKAEGIRMMIEKLGID-KKDVYAFGDGLNDIEMLSFVGTGVAM---GNAHEEVKRVADFVTKPVDK 244 (258)
T ss_dssp CCHHHHHHHHHHHHTCC-GGGEEEECCSGGGHHHHHHSSEEEEE---TTCCHHHHHTCSEEECCGGG
T ss_pred CChHHHHHHHHHHhCCC-HHHEEEECCcHHhHHHHHhCCcEEEe---CCCcHHHHHhCCEEeCCCCc
Confidence 34677899999999998 99999999999999999999996663 22222223334777776543
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.85 E-value=1.8e-09 Score=105.77 Aligned_cols=66 Identities=6% Similarity=-0.050 Sum_probs=48.9
Q ss_pred cccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCcc
Q 010820 429 AVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFA 498 (500)
Q Consensus 429 ~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~ 498 (500)
.....+|+..++.++++++++ ++++++|||+.||+++++.+|+..+. +...+.....+++++++..
T Consensus 223 ~~~~~~K~~al~~l~~~lgi~-~~e~i~~GDs~NDi~m~~~ag~~vam---~na~~~~k~~Ad~v~~~~~ 288 (304)
T 3l7y_A 223 ITKGLHKGWALQQLLKRWNFT-SDHLMAFGDGGNDIEMLKLAKYSYAM---ANAPKNVKAAANYQAKSND 288 (304)
T ss_dssp EETTCSHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHHCTEEEEC---TTSCHHHHHHCSEECCCGG
T ss_pred EcCCCCHHHHHHHHHHHhCcC-HHHEEEECCCHHHHHHHHhcCCeEEc---CCcCHHHHHhccEEcCCCC
Confidence 344566889999999999998 99999999999999999999964333 3222222333467766644
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.83 E-value=3e-09 Score=103.10 Aligned_cols=68 Identities=12% Similarity=0.105 Sum_probs=49.7
Q ss_pred cccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCcc
Q 010820 427 DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFA 498 (500)
Q Consensus 427 d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~ 498 (500)
+......+|+..++.+++++|++ ++++++|||+.||+++++.+|+..+.-+ ..+.....+++++.+..
T Consensus 204 ei~~~~~~K~~~l~~l~~~lgi~-~~e~ia~GD~~NDi~ml~~ag~~vam~n---a~~~~k~~A~~v~~s~~ 271 (283)
T 3dao_A 204 DCNAKGVSKWTALSYLIDRFDLL-PDEVCCFGDNLNDIEMLQNAGISYAVSN---ARQEVIAAAKHTCAPYW 271 (283)
T ss_dssp EEEETTCCHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHHSSEEEEETT---SCHHHHHHSSEEECCGG
T ss_pred EEeeCCCcHHHHHHHHHHHhCCC-HHHEEEECCCHHHHHHHHhCCCEEEcCC---CCHHHHHhcCeECCCCC
Confidence 33344566899999999999998 9999999999999999999996544422 22222233467766544
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=98.79 E-value=3.3e-09 Score=100.54 Aligned_cols=84 Identities=13% Similarity=0.179 Sum_probs=60.6
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcH----HHHHHHHhccCccccccccc-ccc-cccccCCCCHHHHHHHHHHcC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSR----LAQRLIFGNSNYGDLRKYLS-GFF-DTAVGNKRETPSYVEITNSLG 447 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~----~~~~~~l~~~~~~~l~~~f~-~~~-d~~~~~KP~p~~~~~~l~~l~ 447 (500)
..+++||+.++|+.|+++|++++++||.+. ......|+++|+ ..+++ .++ .. ....+...+..+.+ .|
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi---~~~~~~~Lilr~--~~~~K~~~r~~l~~-~G 172 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGF---NGVEESAFYLKK--DKSAKAARFAEIEK-QG 172 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTC---SCCSGGGEEEES--SCSCCHHHHHHHHH-TT
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCc---CcccccceeccC--CCCChHHHHHHHHh-cC
Confidence 357999999999999999999999999864 588888888854 33221 222 11 12345555555554 45
Q ss_pred CCCCCcEEEEeCCHhhHHH
Q 010820 448 VDKPSEILFVTDVYQEATA 466 (500)
Q Consensus 448 v~~p~~~l~VGDs~~Di~a 466 (500)
.. .++||||...|+.+
T Consensus 173 y~---iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 173 YE---IVLYVGDNLDDFGN 188 (262)
T ss_dssp EE---EEEEEESSGGGGCS
T ss_pred CC---EEEEECCChHHhcc
Confidence 54 59999999999997
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=98.77 E-value=5e-09 Score=99.15 Aligned_cols=84 Identities=12% Similarity=0.142 Sum_probs=60.3
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcH----HHHHHHHhccCccccccccc-ccc-cccccCCCCHHHHHHHHHHcC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSR----LAQRLIFGNSNYGDLRKYLS-GFF-DTAVGNKRETPSYVEITNSLG 447 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~----~~~~~~l~~~~~~~l~~~f~-~~~-d~~~~~KP~p~~~~~~l~~l~ 447 (500)
..+++||+.++|+.|+++|++++++||.+. ......|+.+|+ ..+++ .++ .. .++........+.+.+
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi---~~~~~~~Lilr~---~~~~K~~~r~~L~~~g 172 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGF---TGVNDKTLLLKK---DKSNKSVRFKQVEDMG 172 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTC---CCCSTTTEEEES---SCSSSHHHHHHHHTTT
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCc---CccccceeEecC---CCCChHHHHHHHHhcC
Confidence 457999999999999999999999999864 588888888854 33332 112 11 1343344444455556
Q ss_pred CCCCCcEEEEeCCHhhHHH
Q 010820 448 VDKPSEILFVTDVYQEATA 466 (500)
Q Consensus 448 v~~p~~~l~VGDs~~Di~a 466 (500)
.. -++||||+..|+.+
T Consensus 173 y~---iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 173 YD---IVLFVGDNLNDFGD 188 (260)
T ss_dssp CE---EEEEEESSGGGGCG
T ss_pred CC---EEEEECCChHHcCc
Confidence 54 59999999999987
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.72 E-value=7e-09 Score=99.84 Aligned_cols=105 Identities=11% Similarity=0.099 Sum_probs=66.0
Q ss_pred HHhCCcEEEEEcCCcHHHHHHHHhccC--ccccccc-ccc--cccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHh
Q 010820 388 WHSLGTKVYIYSSGSRLAQRLIFGNSN--YGDLRKY-LSG--FFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQ 462 (500)
Q Consensus 388 L~~~G~~l~v~Tn~~~~~~~~~l~~~~--~~~l~~~-f~~--~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~ 462 (500)
+++.++++.++++... ...+++.++ +.+.... ... +++.....++++..++.++++++++ +++|++|||+.+
T Consensus 142 ~~~~~~ki~i~~~~~~--~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~-~~~~~~~GD~~n 218 (271)
T 1rlm_A 142 IDDVLFKFSLNLPDEQ--IPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLS-PQNVVAIGDSGN 218 (271)
T ss_dssp CCSCEEEEEEECCGGG--HHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCC-GGGEEEEECSGG
T ss_pred CCCceEEEEEEcCHHH--HHHHHHHHHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCC-HHHEEEECCcHH
Confidence 3456788888887543 333333221 1011111 111 1244456789999999999999998 999999999999
Q ss_pred hHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCcc
Q 010820 463 EATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFA 498 (500)
Q Consensus 463 Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~ 498 (500)
|+.+++.+|+..+ +..+ .+.....+++++.+..
T Consensus 219 D~~m~~~ag~~va-~~na--~~~~k~~a~~v~~~~~ 251 (271)
T 1rlm_A 219 DAEMLKMARYSFA-MGNA--AENIKQIARYATDDNN 251 (271)
T ss_dssp GHHHHHHCSEEEE-CTTC--CHHHHHHCSEECCCGG
T ss_pred HHHHHHHcCCeEE-eCCc--cHHHHHhCCeeCcCCC
Confidence 9999999999543 3222 1122223366666543
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.67 E-value=4.4e-09 Score=104.47 Aligned_cols=112 Identities=16% Similarity=0.087 Sum_probs=69.0
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccc-cccc--c----------------ccccCCCC-
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL-SGFF--D----------------TAVGNKRE- 435 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f-~~~~--d----------------~~~~~KP~- 435 (500)
.+++++.++|+.|++ |+++.++|+....+.....+.++ +...+ .... + .....++.
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 178 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIG---VRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGE 178 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTT---CCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhh---hhhhhcccccchhhhccccccceeEEecCHHHHhhhhH
Confidence 578999999999999 99999999988777666665553 21211 1100 0 00001111
Q ss_pred --------------HHHHH----------HHHHHcCCCCCCc----EEEEeCCHhhHHHHHHc----CCcEEEEcCCCCC
Q 010820 436 --------------TPSYV----------EITNSLGVDKPSE----ILFVTDVYQEATAAKAA----GLEVVISIRPGNG 483 (500)
Q Consensus 436 --------------p~~~~----------~~l~~l~v~~p~~----~l~VGDs~~Di~aA~~a----G~~~i~v~~~~~~ 483 (500)
|..|. +.....+++ +++ |++|||+.||+.+++.+ |+..+. + + .
T Consensus 179 ~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~-~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-n-a--~ 253 (332)
T 1y8a_A 179 ELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYC-ESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-N-G--N 253 (332)
T ss_dssp HHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHH-HHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-S-C--C
T ss_pred HHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccC-hhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-c-C--C
Confidence 12233 111112666 788 99999999999999999 997654 3 2 1
Q ss_pred CCCCCCCceeeCC
Q 010820 484 PLPENHGFKTINS 496 (500)
Q Consensus 484 ~~~~~~~~~~i~~ 496 (500)
+.....+++++.+
T Consensus 254 ~~lk~~Ad~v~~~ 266 (332)
T 1y8a_A 254 EYALKHADVVIIS 266 (332)
T ss_dssp HHHHTTCSEEEEC
T ss_pred HHHHhhCcEEecC
Confidence 1222334677665
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.62 E-value=3.4e-08 Score=95.72 Aligned_cols=87 Identities=15% Similarity=0.197 Sum_probs=56.0
Q ss_pred HHhCCcEEEEEcCCcHHHHHHHHhccC--ccc-cccccc--ccccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHh
Q 010820 388 WHSLGTKVYIYSSGSRLAQRLIFGNSN--YGD-LRKYLS--GFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQ 462 (500)
Q Consensus 388 L~~~G~~l~v~Tn~~~~~~~~~l~~~~--~~~-l~~~f~--~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~ 462 (500)
+...++...++++........+.+.+. +++ +.-.+. .+++......+|+..++.+++++|++ ++++++|||+.|
T Consensus 158 ~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~-~~~~ia~GD~~N 236 (285)
T 3pgv_A 158 LDPQGISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYT-LSDCIAFGDGMN 236 (285)
T ss_dssp SCCSSEEEEEEECSCHHHHHHHHHHHHHHHGGGEEEEESSTTEEEEEETTCSHHHHHHHHHHHTTCC-GGGEEEEECSGG
T ss_pred cCCCCceEEEEeCCCHHHHHHHHHHHHHHhcCCEEEEEeCCceEEEecCCCChHHHHHHHHHHhCCC-HHHEEEECCcHh
Confidence 344556566677555444443333321 001 111111 12233444567899999999999998 999999999999
Q ss_pred hHHHHHHcCCcEE
Q 010820 463 EATAAKAAGLEVV 475 (500)
Q Consensus 463 Di~aA~~aG~~~i 475 (500)
|+++++.+|+.++
T Consensus 237 Di~ml~~ag~~vA 249 (285)
T 3pgv_A 237 DAEMLSMAGKGCI 249 (285)
T ss_dssp GHHHHHHSSEEEE
T ss_pred hHHHHHhcCCEEE
Confidence 9999999995443
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.58 E-value=5.4e-08 Score=94.45 Aligned_cols=61 Identities=13% Similarity=0.019 Sum_probs=46.2
Q ss_pred CCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCcc
Q 010820 434 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFA 498 (500)
Q Consensus 434 P~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~ 498 (500)
.+...+..++++++++ +++|++|||+.+|+.+++.+|+ ++.+.++. +.....+++++++..
T Consensus 216 ~K~~~~~~~~~~~~~~-~~~~~~~GD~~nD~~m~~~ag~-~va~~~~~--~~~~~~a~~v~~~~~ 276 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIP-LEETAAVGDSLNDKSMLEAAGK-GVAMGNAR--EDIKSIADAVTLTND 276 (288)
T ss_dssp SHHHHHHHHHHHTTCC-GGGEEEEESSGGGHHHHHHSSE-EEECTTCC--HHHHHHCSEECCCGG
T ss_pred ChHHHHHHHHHHhCCC-HHHEEEEcCCHHHHHHHHHcCc-EEEEcCCC--HHHHhhCceeecCCC
Confidence 4677899999999998 9999999999999999999999 55564322 122222367766643
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=98.55 E-value=7.4e-09 Score=93.42 Aligned_cols=92 Identities=14% Similarity=0.105 Sum_probs=78.3
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
..++||+.++|++|++. ++++|+||+.+.++..+++.+ +...+|+..+ +.....| ..|.+.++++|.+ ++
T Consensus 54 v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~l---d~~~~f~~~~~rd~~~~~k---~~~~k~L~~Lg~~-~~ 125 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLL---DKWGAFRARLFRESCVFHR---GNYVKDLSRLGRD-LR 125 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHH---CTTCCEEEEECGGGSEEET---TEEECCGGGTCSC-GG
T ss_pred EEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHH---CCCCcEEEEEeccCceecC---CcEeccHHHhCCC-cc
Confidence 46899999999999997 999999999999999999999 5556666555 3322222 5688899999998 99
Q ss_pred cEEEEeCCHhhHHHHHHcCCcE
Q 010820 453 EILFVTDVYQEATAAKAAGLEV 474 (500)
Q Consensus 453 ~~l~VGDs~~Di~aA~~aG~~~ 474 (500)
+|++|||++.++.++.++|+..
T Consensus 126 ~~vivdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 126 RVLILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp GEEEECSCGGGGTTCTTSBCCC
T ss_pred eEEEEeCCHHHhccCcCCEeEe
Confidence 9999999999999999999984
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=2e-07 Score=96.03 Aligned_cols=101 Identities=17% Similarity=0.233 Sum_probs=82.6
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhcc-Cc----------ccccccccccccccccCCCCHHH------
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS-NY----------GDLRKYLSGFFDTAVGNKRETPS------ 438 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~-~~----------~~l~~~f~~~~d~~~~~KP~p~~------ 438 (500)
..-|++...|++||+.| ++.++||+...++..+++.+ |. .+|.++|+-++ ....||..-.
T Consensus 246 ~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI--~~A~KP~FF~~~~pfr 322 (555)
T 2jc9_A 246 VKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLIL--VDARKPLFFGEGTVLR 322 (555)
T ss_dssp CCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEE--ESCCTTGGGTTCCCEE
T ss_pred CCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEE--EeCCCCCcccCCCcce
Confidence 45578999999999999 99999999999999999887 42 35666676544 2335664222
Q ss_pred ----------------------------HHHHHHHcCCCCCCcEEEEeCCH-hhHHHHH-HcCCcEEEEcCC
Q 010820 439 ----------------------------YVEITNSLGVDKPSEILFVTDVY-QEATAAK-AAGLEVVISIRP 480 (500)
Q Consensus 439 ----------------------------~~~~l~~l~v~~p~~~l~VGDs~-~Di~aA~-~aG~~~i~v~~~ 480 (500)
+.++++.+|++ +++++||||+. .||..++ ..||.++.|...
T Consensus 323 ~Vd~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~-g~eVLYVGDhIftDIl~~kk~~GWrTiLViPE 393 (555)
T 2jc9_A 323 QVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAK-GKDILYIGDHIFGDILKSKKRQGWRTFLVIPE 393 (555)
T ss_dssp EEETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCC-GGGEEEEESCCCCCCHHHHHHHCCEEEEECTT
T ss_pred EeecCCCccccccccccccCCceeccCCHHHHHHHhCCC-CCeEEEECCEehHhHHhHHhhcCeEEEEEEec
Confidence 58999999998 99999999998 9999997 899999999764
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=7.4e-08 Score=91.90 Aligned_cols=48 Identities=13% Similarity=0.077 Sum_probs=41.6
Q ss_pred cccccCCCCHHHHHHHHHHcCCCCC--CcEEEEeCCHhhHHHHHHcCCcEEE
Q 010820 427 DTAVGNKRETPSYVEITNSLGVDKP--SEILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 427 d~~~~~KP~p~~~~~~l~~l~v~~p--~~~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
+.... ++|+.....++++++++ + +++++|||+.||+.+++.+|+..+.
T Consensus 170 ei~~~-~~K~~~l~~l~~~~~i~-~~~~~~~~~GD~~nD~~m~~~ag~~va~ 219 (259)
T 3zx4_A 170 HAAKG-ADKGRAVARLRALWPDP-EEARFAVGLGDSLNDLPLFRAVDLAVYV 219 (259)
T ss_dssp EEESS-CCHHHHHHHHHHTCSSH-HHHTSEEEEESSGGGHHHHHTSSEEEEC
T ss_pred EEcCC-CCHHHHHHHHHHHhCCC-CCCceEEEEeCCHHHHHHHHhCCCeEEe
Confidence 33344 78899999999999998 8 9999999999999999999976443
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.43 E-value=1.1e-07 Score=91.96 Aligned_cols=64 Identities=17% Similarity=0.164 Sum_probs=46.7
Q ss_pred cCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCcc
Q 010820 431 GNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFA 498 (500)
Q Consensus 431 ~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~ 498 (500)
..-+++..+..++++++++ ++++++|||+.+|+.+++.+|+ .+.+..+ .+.....+++++++..
T Consensus 195 ~~~~K~~~l~~l~~~~~~~-~~~~~~~GD~~nD~~m~~~ag~-~va~~n~--~~~~~~~a~~v~~~~~ 258 (282)
T 1rkq_A 195 KRVNKGTGVKSLADVLGIK-PEEIMAIGDQENDIAMIEYAGV-GVAVDNA--IPSVKEVANFVTKSNL 258 (282)
T ss_dssp TTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSE-EEECTTS--CHHHHHHCSEECCCTT
T ss_pred CCCCCHHHHHHHHHHhCCC-HHHEEEECCcHHHHHHHHHCCc-EEEecCC--cHHHHhhCCEEecCCC
Confidence 3446889999999999998 9999999999999999999998 3444322 1111222366666543
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.24 E-value=1.7e-06 Score=82.88 Aligned_cols=47 Identities=17% Similarity=0.166 Sum_probs=40.8
Q ss_pred cccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcE
Q 010820 427 DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV 474 (500)
Q Consensus 427 d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~ 474 (500)
+......+|+..+..++++++++ +++|++|||+.+|+.+++.+|+..
T Consensus 183 ei~~~~~~K~~~~~~~~~~~~~~-~~~~~~~GD~~nD~~~~~~ag~~v 229 (268)
T 1nf2_A 183 EIVPKNVDKGKALRFLRERMNWK-KEEIVVFGDNENDLFMFEEAGLRV 229 (268)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCC-GGGEEEEECSHHHHHHHTTCSEEE
T ss_pred EEeCCCCChHHHHHHHHHHcCCC-HHHeEEEcCchhhHHHHHHcCCEE
Confidence 33344567889999999999998 999999999999999999999844
|
| >4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A | Back alignment and structure |
|---|
Probab=98.22 E-value=6e-06 Score=84.15 Aligned_cols=102 Identities=18% Similarity=0.256 Sum_probs=77.7
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccC------cccccccccccccccccCCCC--------------
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN------YGDLRKYLSGFFDTAVGNKRE-------------- 435 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~------~~~l~~~f~~~~d~~~~~KP~-------------- 435 (500)
..-|.+...|++||++|-++.++||+...++...+..+- ..+|.++||-++ +...||.
T Consensus 186 ~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVI--v~A~KP~FF~~~~~~~~v~~~ 263 (470)
T 4g63_A 186 IREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVI--TLANKPRFFYDNLRFLSVNPE 263 (470)
T ss_dssp ECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEE--ESCCTTHHHHSCCCEEEECTT
T ss_pred hCCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEE--ECCCCCCcccCCCcceEEECC
Confidence 345788999999999999999999999999988887763 336677776655 1223440
Q ss_pred -----------------HHHHHHHHHHcCCCCCCcEEEEeCCH-hhHHHHHH-cCCcEEEEcCC
Q 010820 436 -----------------TPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKA-AGLEVVISIRP 480 (500)
Q Consensus 436 -----------------p~~~~~~l~~l~v~~p~~~l~VGDs~-~Di~aA~~-aG~~~i~v~~~ 480 (500)
---.....+.+|.. ..+++||||+. .||..++. .||.|+.|...
T Consensus 264 ~g~l~~~~~~~~~~vY~gGn~~~l~~llg~~-g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E 326 (470)
T 4g63_A 264 NGTMTNVHGPIVPGVYQGGNAKKFTEDLGVG-GDEILYIGDHIYGDILRLKKDCNWRTALVVEE 326 (470)
T ss_dssp TCCEEECCSSCCSEEEEECCHHHHHHHTTCC-GGGEEEEESCCCSCHHHHHHSCCCEEEEECTT
T ss_pred CCcccccccccCCceeecCcHHHHHHHhCCC-CCeEEEECCchHHHHHhhhhccCCeEEEEhHH
Confidence 01234566677887 88999999998 89888876 79999999764
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=98.11 E-value=7.4e-06 Score=79.65 Aligned_cols=97 Identities=20% Similarity=0.150 Sum_probs=63.2
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccc-ccccccc--c-c---c--------ccCCCCHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR-KYLSGFF--D-T---A--------VGNKRETPSY 439 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~-~~f~~~~--d-~---~--------~~~KP~p~~~ 439 (500)
.++.||+.++++.|+++|++++++|++....++.+++.+++.--. ..+.... + . . ...|+.|..-
T Consensus 140 i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~~k 219 (297)
T 4fe3_A 140 VMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGALK 219 (297)
T ss_dssp CCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHHT
T ss_pred CCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHHHH
Confidence 578999999999999999999999999999999999998642100 0011111 1 0 0 0112222221
Q ss_pred HHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCC
Q 010820 440 VEITNSLGVDKPSEILFVTDVYQEATAAKAAGL 472 (500)
Q Consensus 440 ~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~ 472 (500)
.....++.-. ..+++||||+.||+.+++.+..
T Consensus 220 ~~~~~~~~~~-~~~v~~vGDGiNDa~m~k~l~~ 251 (297)
T 4fe3_A 220 NTDYFSQLKD-NSNIILLGDSQGDLRMADGVAN 251 (297)
T ss_dssp CHHHHHHTTT-CCEEEEEESSGGGGGTTTTCSC
T ss_pred HHHHHHhhcc-CCEEEEEeCcHHHHHHHhCccc
Confidence 1222233333 6789999999999998775433
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.10 E-value=5.9e-06 Score=80.60 Aligned_cols=67 Identities=7% Similarity=0.052 Sum_probs=48.1
Q ss_pred cccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeC-Cc
Q 010820 427 DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTIN-SF 497 (500)
Q Consensus 427 d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~-~l 497 (500)
+.....-+++..+..++++++++ ++++++|||+.+|+.+++.+|+. +.+.++ .+.....++++++ +.
T Consensus 217 ei~~~~~~K~~~l~~l~~~~~~~-~~~~~~~GD~~nD~~m~~~ag~~-va~~na--~~~~k~~a~~v~~~~~ 284 (301)
T 2b30_A 217 EVTKLGHDKYTGINYLLKHYNIS-NDQVLVVGDAENDIAMLSNFKYS-FAVANA--TDSAKSHAKCVLPVSH 284 (301)
T ss_dssp EEEETTCCHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHSCSEE-EECTTC--CHHHHHHSSEECSSCT
T ss_pred EecCCCCCcHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHcCCe-EEEcCC--cHHHHhhCCEEEccCC
Confidence 33334456889999999999998 99999999999999999999985 334332 1112223366665 53
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.01 E-value=4.6e-05 Score=76.72 Aligned_cols=102 Identities=15% Similarity=0.155 Sum_probs=67.7
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcc-ccc--ccc--------cccc-ccc------ccCCCCHH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYG-DLR--KYL--------SGFF-DTA------VGNKRETP 437 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~-~l~--~~f--------~~~~-d~~------~~~KP~p~ 437 (500)
+++|++.++++.|+++|++++|+|++....++.+.+.+|+. ++. +.+ ++.+ ... ..+.-++.
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~~ 300 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKVQ 300 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHHH
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchHH
Confidence 47999999999999999999999999999999999988531 221 111 1111 000 01111445
Q ss_pred HHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHc-CCcE-EEEcC
Q 010820 438 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAA-GLEV-VISIR 479 (500)
Q Consensus 438 ~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~a-G~~~-i~v~~ 479 (500)
.+.+.++. ... ...++++||+.+|+.+.+.. +... +.+++
T Consensus 301 ~i~~~~~~-~~~-~~~i~a~GDs~~D~~ML~~~~~~~~~liinr 342 (385)
T 4gxt_A 301 TINKLIKN-DRN-YGPIMVGGDSDGDFAMLKEFDHTDLSLIIHR 342 (385)
T ss_dssp HHHHHTCC-TTE-ECCSEEEECSGGGHHHHHHCTTCSEEEEECC
T ss_pred HHHHHHHh-cCC-CCcEEEEECCHhHHHHHhcCccCceEEEEcC
Confidence 55444332 233 45799999999999999984 3444 45554
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.97 E-value=1.6e-05 Score=85.76 Aligned_cols=106 Identities=14% Similarity=0.179 Sum_probs=75.2
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEE
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 455 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l 455 (500)
++.|++.++|++|+++|+++.++|+........+.+.+ ++..++.... .+.|.+ +++++.-. ++++
T Consensus 457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~l---gi~~~~~~~~-----P~~K~~----~v~~l~~~--~~v~ 522 (645)
T 3j08_A 457 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL---NLDLVIAEVL-----PHQKSE----EVKKLQAK--EVVA 522 (645)
T ss_dssp CCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH---TCSEEECSCC-----TTCHHH----HHHHHTTT--CCEE
T ss_pred CchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc---CCCEEEEeCC-----HHhHHH----HHHHHhhC--CeEE
Confidence 68899999999999999999999999999999999888 4443332221 223333 44444432 6899
Q ss_pred EEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceee--CCcc
Q 010820 456 FVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTI--NSFA 498 (500)
Q Consensus 456 ~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i--~~l~ 498 (500)
||||+.||+.+.+.+|+. +..+...+.....+|+++ +++.
T Consensus 523 ~vGDg~ND~~al~~A~vg---iamg~g~~~a~~~AD~vl~~~~~~ 564 (645)
T 3j08_A 523 FVGDGINDAPALAQADLG---IAVGSGSDVAVESGDIVLIRDDLR 564 (645)
T ss_dssp EEECSSSCHHHHHHSSEE---EEECCCSCCSSCCSSSEESSCCTT
T ss_pred EEeCCHhHHHHHHhCCEE---EEeCCCcHHHHHhCCEEEecCCHH
Confidence 999999999999999943 433322223344457777 4443
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=97.81 E-value=1.7e-05 Score=67.90 Aligned_cols=37 Identities=8% Similarity=-0.053 Sum_probs=28.5
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHH---HHHHHHhcc
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRL---AQRLIFGNS 413 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~---~~~~~l~~~ 413 (500)
+.|++.++|+.|+++|+.++++|+.+.. .....++..
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~ 64 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRAR 64 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHc
Confidence 5578999999999999999999998743 334444444
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=97.78 E-value=5.6e-06 Score=75.48 Aligned_cols=91 Identities=12% Similarity=0.037 Sum_probs=68.7
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccc-ccccccc--cccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR-KYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~-~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
...||+.++|+.|. +++.++|.|++.+.++..+++.+ +.. .+|...+ +.... + ...|.+.++++|.+ ++
T Consensus 59 ~~RPgl~eFL~~l~-~~yeivI~Tas~~~ya~~vl~~L---Dp~~~~f~~rl~R~~c~~-~--~g~y~KdL~~Lgrd-l~ 130 (204)
T 3qle_A 59 AKRPGADYFLGYLS-QYYEIVLFSSNYMMYSDKIAEKL---DPIHAFVSYNLFKEHCVY-K--DGVHIKDLSKLNRD-LS 130 (204)
T ss_dssp EECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHT---STTCSSEEEEECGGGSEE-E--TTEEECCGGGSCSC-GG
T ss_pred EeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHHHHHh---CCCCCeEEEEEEecceeE-E--CCeeeecHHHhCCC-hH
Confidence 47899999999998 68999999999999999999999 444 3555433 22211 1 12367788899997 99
Q ss_pred cEEEEeCCHhhHHHHHHcCCcE
Q 010820 453 EILFVTDVYQEATAAKAAGLEV 474 (500)
Q Consensus 453 ~~l~VGDs~~Di~aA~~aG~~~ 474 (500)
+|++|+|++.-+......|+..
T Consensus 131 ~vIiIDDsp~~~~~~p~N~I~I 152 (204)
T 3qle_A 131 KVIIIDTDPNSYKLQPENAIPM 152 (204)
T ss_dssp GEEEEESCTTTTTTCGGGEEEC
T ss_pred HEEEEECCHHHHhhCccCceEe
Confidence 9999999998775554555433
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.74 E-value=8.1e-05 Score=81.28 Aligned_cols=102 Identities=16% Similarity=0.162 Sum_probs=73.5
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEE
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 455 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l 455 (500)
++.|++.++|+.|+++|+++.++|+........+.+.+| +..++.... .+.|.+ +++++.- .++++
T Consensus 535 ~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lg---i~~~~~~~~-----P~~K~~----~v~~l~~--~~~v~ 600 (723)
T 3j09_A 535 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN---LDLVIAEVL-----PHQKSE----EVKKLQA--KEVVA 600 (723)
T ss_dssp CSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHT---CSEEECSCC-----TTCHHH----HHHHHTT--TCCEE
T ss_pred CcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcC---CcEEEccCC-----HHHHHH----HHHHHhc--CCeEE
Confidence 688999999999999999999999999999999998884 443332211 222333 4444443 26899
Q ss_pred EEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceee
Q 010820 456 FVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTI 494 (500)
Q Consensus 456 ~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i 494 (500)
||||+.||+.+.+.+|+ ++.-+...+...+.+|+++
T Consensus 601 ~vGDg~ND~~al~~A~v---giamg~g~~~a~~~AD~vl 636 (723)
T 3j09_A 601 FVGDGINDAPALAQADL---GIAVGSGSDVAVESGDIVL 636 (723)
T ss_dssp EEECSSTTHHHHHHSSE---EEECCCCSCCSSCCSSEEC
T ss_pred EEECChhhHHHHhhCCE---EEEeCCCcHHHHHhCCEEE
Confidence 99999999999999994 4444432233344458887
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.73 E-value=3.5e-05 Score=73.93 Aligned_cols=52 Identities=12% Similarity=-0.017 Sum_probs=43.1
Q ss_pred cccccCCCCHHHHHHHHHHcC-CCCCCc--EEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 427 DTAVGNKRETPSYVEITNSLG-VDKPSE--ILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 427 d~~~~~KP~p~~~~~~l~~l~-v~~p~~--~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
+.....-+|...+..++++++ ++ +++ +++|||+.||+.+.+.+|+. +.+.++
T Consensus 182 eI~~~~~~K~~~l~~l~~~~~~~~-~~~~~~~~~GD~~nD~~m~~~ag~~-va~~n~ 236 (275)
T 1xvi_A 182 HVLDASAGKDQAANWIIATYQQLS-GKRPTTLGLGDGPNDAPLLEVMDYA-VIVKGL 236 (275)
T ss_dssp EEEETTCCHHHHHHHHHHHHHHHH-SSCCEEEEEESSGGGHHHHHTSSEE-EECCCC
T ss_pred EEecCCCCHHHHHHHHHHHhhhcc-cccCcEEEECCChhhHHHHHhCCce-EEecCC
Confidence 444445678899999999999 98 999 99999999999999999984 555444
|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=97.66 E-value=1.5e-05 Score=79.58 Aligned_cols=92 Identities=12% Similarity=0.051 Sum_probs=66.3
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccc-ccc-ccc--cccccCCCCHHHHHHHHHHc-CC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLS-GFF--DTAVGNKRETPSYVEITNSL-GV 448 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~-~f~-~~~--d~~~~~KP~p~~~~~~l~~l-~v 448 (500)
.....||+.++|+.+. ++|.++|.|++.+.++..+++.+ +... +|. .++ +.. +.+|.+-++++ +.
T Consensus 73 ~v~~RPg~~eFL~~l~-~~yeivI~Tas~~~yA~~vl~~L---Dp~~~~f~~ri~sr~~~------g~~~~KdL~~L~~~ 142 (372)
T 3ef0_A 73 YIKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKII---DPTGKLFQDRVLSRDDS------GSLAQKSLRRLFPC 142 (372)
T ss_dssp EEEECTTHHHHHHHHH-TTEEEEEECSSCHHHHHHHHHHH---CTTSCSSSSCEECTTTS------SCSSCCCGGGTCSS
T ss_pred EEEECcCHHHHHHHHh-cCcEEEEEeCCcHHHHHHHHHHh---ccCCceeeeEEEEecCC------CCcceecHHHhcCC
Confidence 3578899999999998 68999999999999999999998 4444 455 333 111 11345556666 88
Q ss_pred CCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 449 DKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 449 ~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
+ ++++++|+|++.-... + . ..|.|...
T Consensus 143 d-l~~viiiDd~~~~~~~-~--p-N~I~i~~~ 169 (372)
T 3ef0_A 143 D-TSMVVVIDDRGDVWDW-N--P-NLIKVVPY 169 (372)
T ss_dssp C-CTTEEEEESCSGGGTT-C--T-TEEECCCC
T ss_pred C-CceEEEEeCCHHHcCC-C--C-cEeeeCCc
Confidence 7 9999999999843321 1 3 56666543
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00019 Score=78.13 Aligned_cols=88 Identities=14% Similarity=0.219 Sum_probs=68.6
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEE
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 455 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l 455 (500)
++.|++.++|++|+++|+++.++|+........+.+.+| +..++. .-.|+--..+++++.-. .+.++
T Consensus 554 ~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lg---i~~v~a---------~~~P~~K~~~v~~l~~~-g~~V~ 620 (736)
T 3rfu_A 554 PIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLG---IKKVVA---------EIMPEDKSRIVSELKDK-GLIVA 620 (736)
T ss_dssp CBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHT---CCCEEC---------SCCHHHHHHHHHHHHHH-SCCEE
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC---CCEEEE---------ecCHHHHHHHHHHHHhc-CCEEE
Confidence 678999999999999999999999999999999998884 333322 11333444555555545 77899
Q ss_pred EEeCCHhhHHHHHHcCCcEEE
Q 010820 456 FVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 456 ~VGDs~~Di~aA~~aG~~~i~ 476 (500)
||||+.||+.+.+.+|+....
T Consensus 621 ~vGDG~ND~paL~~AdvGIAm 641 (736)
T 3rfu_A 621 MAGDGVNDAPALAKADIGIAM 641 (736)
T ss_dssp EEECSSTTHHHHHHSSEEEEE
T ss_pred EEECChHhHHHHHhCCEEEEe
Confidence 999999999999999965433
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0014 Score=64.28 Aligned_cols=38 Identities=24% Similarity=0.364 Sum_probs=35.7
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhcc
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 413 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~ 413 (500)
.+||++.++++.|+++|++++|||.+....++.+.+..
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 58999999999999999999999999999999998775
|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.00057 Score=66.64 Aligned_cols=95 Identities=14% Similarity=0.083 Sum_probs=64.8
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc-ccc---c-cCCCCHHHHHHHHHHc-----
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-DTA---V-GNKRETPSYVEITNSL----- 446 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~-d~~---~-~~KP~p~~~~~~l~~l----- 446 (500)
..||+.++|+.+.+ .|.++|.|.+...++..+++.++..+-..+-..+| +.. . ..+.....|.+-++++
T Consensus 165 ~RP~l~eFL~~l~~-~yeivIfTas~~~ya~~vld~Ld~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~p 243 (320)
T 3shq_A 165 MRPYLHEFLTSAYE-DYDIVIWSATSMRWIEEKMRLLGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALYK 243 (320)
T ss_dssp BCTTHHHHHHHHHH-HEEEEEECSSCHHHHHHHHHHTTCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHHCT
T ss_pred eCCCHHHHHHHHHh-CCEEEEEcCCcHHHHHHHHHHhCCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhcccC
Confidence 77999999999985 69999999999999999999884322111101112 221 1 1122233455666666
Q ss_pred CCCCCCcEEEEeCCHhhHHHHHHcCCc
Q 010820 447 GVDKPSEILFVTDVYQEATAAKAAGLE 473 (500)
Q Consensus 447 ~v~~p~~~l~VGDs~~Di~aA~~aG~~ 473 (500)
+.+ ++++++|+|++.-.......|+.
T Consensus 244 ~rd-l~~tIiIDdsp~~~~~~p~NgI~ 269 (320)
T 3shq_A 244 QYN-SSNTIMFDDIRRNFLMNPKSGLK 269 (320)
T ss_dssp TCC-GGGEEEEESCGGGGTTSGGGEEE
T ss_pred CCC-hhHEEEEeCChHHhccCcCceEE
Confidence 776 99999999999777666555544
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0029 Score=71.66 Aligned_cols=100 Identities=12% Similarity=0.077 Sum_probs=70.6
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccc-ccccc------------------ccccCCCCH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL-SGFFD------------------TAVGNKRET 436 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f-~~~~d------------------~~~~~KP~p 436 (500)
++.|++.++++.|+++|+++.++|+........+.+.+|+..-...+ +..+. ......-.|
T Consensus 603 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P 682 (995)
T 3ar4_A 603 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEP 682 (995)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCS
T ss_pred CCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeCH
Confidence 78899999999999999999999999999999999988653211100 00000 001111123
Q ss_pred HHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 010820 437 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 437 ~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
+--.++++.+.-. .+.++||||+.||+.+.+++++....
T Consensus 683 ~~K~~~v~~l~~~-g~~v~~~GDG~ND~~alk~Advgiam 721 (995)
T 3ar4_A 683 SHKSKIVEYLQSY-DEITAMTGDGVNDAPALKKAEIGIAM 721 (995)
T ss_dssp SHHHHHHHHHHTT-TCCEEEEECSGGGHHHHHHSTEEEEE
T ss_pred HHHHHHHHHHHHC-CCEEEEEcCCchhHHHHHHCCeEEEe
Confidence 3444555666555 67899999999999999999986654
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0028 Score=59.48 Aligned_cols=30 Identities=10% Similarity=-0.035 Sum_probs=21.3
Q ss_pred HHHHHHHHHhCCcEEEEEcCCcHHHHHHHH
Q 010820 381 VPEALEKWHSLGTKVYIYSSGSRLAQRLIF 410 (500)
Q Consensus 381 v~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l 410 (500)
..++|++|+++|++++++|+.+.......+
T Consensus 26 ~~~~l~~l~~~g~~~~iaTGR~~~~~~~~l 55 (246)
T 3f9r_A 26 MRALIKRARGAGFCVGTVGGSDFAKQVEQL 55 (246)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEECCCCHHHHHHHh
Confidence 446677888888888888887776555544
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0023 Score=53.43 Aligned_cols=27 Identities=30% Similarity=0.375 Sum_probs=23.5
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcH
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSR 403 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~ 403 (500)
+.+++.++|++|+++|++++++||...
T Consensus 25 ~~~~~~~~l~~l~~~Gi~~~iaTGR~~ 51 (126)
T 1xpj_A 25 PRLDVIEQLREYHQLGFEIVISTARNM 51 (126)
T ss_dssp BCHHHHHHHHHHHHTTCEEEEEECTTT
T ss_pred CCHHHHHHHHHHHhCCCeEEEEeCCCh
Confidence 556778999999999999999999864
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=95.98 E-value=0.015 Score=65.98 Aligned_cols=100 Identities=16% Similarity=0.144 Sum_probs=70.0
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccc-ccc--------------------cccc--------
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR-KYL--------------------SGFF-------- 426 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~-~~f--------------------~~~~-------- 426 (500)
++.|++.++|++|+++|+++.++|+........+.+.+|+..-. ..+ ...+
T Consensus 599 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~ 678 (1028)
T 2zxe_A 599 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDL 678 (1028)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTC
T ss_pred CCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhC
Confidence 68899999999999999999999999999999998888653100 000 0000
Q ss_pred ------------cccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 010820 427 ------------DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 427 ------------d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
+......-.|+--..+.+.+.-. .+.++||||+.||+.+-+.+++....
T Consensus 679 ~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~-g~~V~~iGDG~ND~paLk~AdvGIAm 739 (1028)
T 2zxe_A 679 STEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAM 739 (1028)
T ss_dssp CHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHT-TCCEEEEECSGGGHHHHHHSSEEEEE
T ss_pred CHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhC-CCEEEEEcCCcchHHHHHhCCceEEe
Confidence 00112233455444455544433 56899999999999999999987654
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=95.93 E-value=0.0081 Score=56.28 Aligned_cols=39 Identities=10% Similarity=-0.006 Sum_probs=32.8
Q ss_pred CHHHHHHHHHHcCC-CCCCcEEEEeCCHhhHHHHHHcCCcE
Q 010820 435 ETPSYVEITNSLGV-DKPSEILFVTDVYQEATAAKAAGLEV 474 (500)
Q Consensus 435 ~p~~~~~~l~~l~v-~~p~~~l~VGDs~~Di~aA~~aG~~~ 474 (500)
|...++.+++++++ . ++++++|||+.||+++.+.+|+..
T Consensus 180 Kg~al~~l~~~~~~~~-~~~viafGD~~NDi~Ml~~ag~~v 219 (249)
T 2zos_A 180 KGKAAKILLDFYKRLG-QIESYAVGDSYNDFPMFEVVDKVF 219 (249)
T ss_dssp HHHHHHHHHHHHHTTS-CEEEEEEECSGGGHHHHTTSSEEE
T ss_pred hHHHHHHHHHHhccCC-CceEEEECCCcccHHHHHhCCcEE
Confidence 34566677778787 7 899999999999999999999853
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=95.83 E-value=0.011 Score=65.67 Aligned_cols=98 Identities=12% Similarity=0.078 Sum_probs=68.4
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccc----ccc------------ccccc---cccccCCCCH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDL----RKY------------LSGFF---DTAVGNKRET 436 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l----~~~------------f~~~~---d~~~~~KP~p 436 (500)
++.|++.+++++|++.|+++.++|+........+.+.+|+..- ... +.... +...+..|
T Consensus 535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~P-- 612 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFP-- 612 (920)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCCS--
T ss_pred cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEeCH--
Confidence 6889999999999999999999999999999999998865310 000 11111 01112233
Q ss_pred HHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 010820 437 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 437 ~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
+-=.++.+.+.-. .+.++|+||+.||..+-+.+++....
T Consensus 613 ~~K~~iV~~Lq~~-g~~Vam~GDGvNDapaLk~AdvGIAm 651 (920)
T 1mhs_A 613 QHKYNVVEILQQR-GYLVAMTGDGVNDAPSLKKADTGIAV 651 (920)
T ss_dssp THHHHHHHHHHTT-TCCCEECCCCGGGHHHHHHSSEEEEE
T ss_pred HHHHHHHHHHHhC-CCeEEEEcCCcccHHHHHhCCcCccc
Confidence 2233344444333 46899999999999999999986654
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=95.73 E-value=0.0052 Score=68.27 Aligned_cols=100 Identities=15% Similarity=0.084 Sum_probs=67.9
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccc---cccc--------------ccccc-ccccCCCCHH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDL---RKYL--------------SGFFD-TAVGNKRETP 437 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l---~~~f--------------~~~~d-~~~~~KP~p~ 437 (500)
++.|++.+++++|++.|+++.++|+........+.+.+|+..- ...+ +...+ ......-.|+
T Consensus 488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~ 567 (885)
T 3b8c_A 488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPE 567 (885)
T ss_dssp CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCHH
T ss_pred ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECHH
Confidence 6789999999999999999999999999999999999865310 0000 11000 0011222333
Q ss_pred HHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 010820 438 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 438 ~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
-=.++.+.+.-. .+.++|+||+.||..+-+.+++....
T Consensus 568 ~K~~iV~~lq~~-g~~Vam~GDGvNDapaLk~AdvGIAm 605 (885)
T 3b8c_A 568 HKYEIVKKLQER-KHIVGMTGDGVNDAPALKKADIGIAV 605 (885)
T ss_dssp HHHHHHHHHHHT-TCCCCBCCCSSTTHHHHHHSSSCCCC
T ss_pred HHHHHHHHHHHC-CCeEEEEcCCchhHHHHHhCCEeEEe
Confidence 333344444333 46899999999999999999876544
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=95.11 E-value=0.018 Score=53.46 Aligned_cols=25 Identities=16% Similarity=0.201 Sum_probs=20.8
Q ss_pred EEEEeCCHhhHHHHHHc--CCcEEEEc
Q 010820 454 ILFVTDVYQEATAAKAA--GLEVVISI 478 (500)
Q Consensus 454 ~l~VGDs~~Di~aA~~a--G~~~i~v~ 478 (500)
+++|||+.||+.+-+.+ |...+.-+
T Consensus 174 via~GD~~ND~~Ml~~a~~g~~vam~N 200 (239)
T 1u02_A 174 AIIAGDDATDEAAFEANDDALTIKVGE 200 (239)
T ss_dssp EEEEESSHHHHHHHHTTTTSEEEEESS
T ss_pred eEEEeCCCccHHHHHHhhCCcEEEECC
Confidence 89999999999999999 87654443
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=95.09 E-value=0.026 Score=52.57 Aligned_cols=30 Identities=10% Similarity=-0.109 Sum_probs=19.9
Q ss_pred CCCCCCcEEEEeC----CHhhHHHHHHcCCcEEEE
Q 010820 447 GVDKPSEILFVTD----VYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 447 ~v~~p~~~l~VGD----s~~Di~aA~~aG~~~i~v 477 (500)
+++ +++++.||| +.||+.+.+.+|...+.+
T Consensus 198 ~i~-~~~viafGD~~~~~~ND~~Ml~~a~~ag~av 231 (246)
T 2amy_A 198 NDG-YKTIYFFGDKTMPGGNDHEIFTDPRTMGYSV 231 (246)
T ss_dssp TSC-CSEEEEEECSCC---CCCHHHHCTTEEEEEC
T ss_pred CCC-HHHEEEECCCCCCCCCcHHHHHhCCcceEEe
Confidence 344 678888888 888888888777655554
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=95.04 E-value=0.042 Score=62.36 Aligned_cols=119 Identities=15% Similarity=0.131 Sum_probs=74.9
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccc-------------------------cccc-----
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-------------------------YLSG----- 424 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~-------------------------~f~~----- 424 (500)
-++.|++.++|++|+++|+++.++|+........+.+.+|+..-.. .+.+
T Consensus 603 Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 682 (1034)
T 3ixz_A 603 DPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKD 682 (1034)
T ss_pred CCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhh
Confidence 3788999999999999999999999999999999988886521000 0000
Q ss_pred --------cc---cccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCcee
Q 010820 425 --------FF---DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKT 493 (500)
Q Consensus 425 --------~~---d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~ 493 (500)
.. .......-.|+--.++.+.+.-. ...++|+||+.||+.+-+.+|+....-..+. +.....+|++
T Consensus 683 ~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~-g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~--d~aK~aAD~V 759 (1034)
T 3ixz_A 683 MDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRL-GAIVAVTGDGVNDSPALKKADIGVAMGIAGS--DAAKNAADMI 759 (1034)
T ss_pred CCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHc-CCEEEEECCcHHhHHHHHHCCeeEEeCCccC--HHHHHhcCEE
Confidence 00 00011112333334444444433 4578999999999999999997655321111 1122234676
Q ss_pred eCC
Q 010820 494 INS 496 (500)
Q Consensus 494 i~~ 496 (500)
+.+
T Consensus 760 l~~ 762 (1034)
T 3ixz_A 760 LLD 762 (1034)
T ss_pred ecc
Confidence 655
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=94.93 E-value=0.013 Score=54.61 Aligned_cols=49 Identities=16% Similarity=0.171 Sum_probs=41.5
Q ss_pred cccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEE
Q 010820 427 DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 427 d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v 477 (500)
+.....-+|+..+..++++++++ ++++++|||+.||+.+++.+|+. +.+
T Consensus 155 ei~~~~~~K~~~l~~l~~~~~~~-~~~~~~~GD~~nD~~m~~~~g~~-va~ 203 (244)
T 1s2o_A 155 DLLPQRSNKGNATQYLQQHLAME-PSQTLVCGDSGNDIGLFETSARG-VIV 203 (244)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHTSSSEE-EEC
T ss_pred EeccCCCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHhccCcE-EEE
Confidence 44444567899999999999998 99999999999999999998874 444
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=94.03 E-value=0.058 Score=50.72 Aligned_cols=39 Identities=5% Similarity=-0.206 Sum_probs=30.4
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEeC----CHhhHHHHHHcCCcEEEE
Q 010820 435 ETPSYVEITNSLGVDKPSEILFVTD----VYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~~p~~~l~VGD----s~~Di~aA~~aG~~~i~v 477 (500)
|...+..+ ++++ +++++.||| +.||+.+.+.+|...+.+
T Consensus 198 Kg~al~~l---~gi~-~~~viafGDs~~~~~NDi~Ml~~~~~~g~av 240 (262)
T 2fue_A 198 KRYCLDSL---DQDS-FDTIHFFGNETSPGGNDFEIFADPRTVGHSV 240 (262)
T ss_dssp TTHHHHHH---TTSC-CSEEEEEESCCSTTSTTHHHHHSTTSEEEEC
T ss_pred HHHHHHHH---HCCC-HHHEEEECCCCCCCCCCHHHHhcCccCcEEe
Confidence 44444444 6676 889999999 899999999999866666
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=92.91 E-value=0.042 Score=51.28 Aligned_cols=13 Identities=46% Similarity=0.503 Sum_probs=12.2
Q ss_pred ceEEEEecCCccc
Q 010820 284 PRCIVLDIEGTTT 296 (500)
Q Consensus 284 ~k~vlFD~DGTL~ 296 (500)
+|+|+||+||||+
T Consensus 2 ikli~~DlDGTLl 14 (249)
T 2zos_A 2 IRLIFLDIDKTLI 14 (249)
T ss_dssp EEEEEECCSTTTC
T ss_pred ccEEEEeCCCCcc
Confidence 6899999999999
|
| >3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A | Back alignment and structure |
|---|
Probab=89.95 E-value=2.4 Score=38.87 Aligned_cols=92 Identities=11% Similarity=0.073 Sum_probs=61.5
Q ss_pred HHHHHHHHHhC-CcEEEEEcCCcHHHHHHHHhccCcccccccc--cccccccccCCCCHHHHHHHHHHcCCCCCCcEEEE
Q 010820 381 VPEALEKWHSL-GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL--SGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFV 457 (500)
Q Consensus 381 v~~~L~~L~~~-G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f--~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~V 457 (500)
+...|.....+ +.--+++|++.-...-.++=-+ +|..+| ..+++.. .-.|..+|++|.+++|- .-.-++|
T Consensus 164 a~k~L~~i~sr~~~vNVLVTs~qLVPaLaK~LLy---gL~~~fpieNIYSa~--kiGKesCFerI~~RFG~--k~~yvvI 236 (274)
T 3geb_A 164 SLKALNLINSRPNCVNVLVTTTQLIPALAKVLLY---GLGSVFPIENIYSAT--KTGKESCFERIMQRFGR--KAVYVVI 236 (274)
T ss_dssp HHHHHHHHHHSTTEEEEEEESSCHHHHHHHHHHT---TCTTTSCGGGEEETT--TTCHHHHHHHHHHHHCT--TSEEEEE
T ss_pred HHHHHHhhccCCceeEEEEecCchHHHHHHHHHh---hcccceecccccchh--hcCHHHHHHHHHHHhCC--CceEEEE
Confidence 34455555433 5667888988754444444233 334442 2233222 13478899999999983 5667889
Q ss_pred eCCHhhHHHHHHcCCcEEEEcC
Q 010820 458 TDVYQEATAAKAAGLEVVISIR 479 (500)
Q Consensus 458 GDs~~Di~aA~~aG~~~i~v~~ 479 (500)
||+..--++|+..+|+++-|..
T Consensus 237 GDG~eEe~AAk~~n~PFwrI~~ 258 (274)
T 3geb_A 237 GDGVEEEQGAKKHNMPFWRISC 258 (274)
T ss_dssp ESSHHHHHHHHHTTCCEEECCS
T ss_pred CCCHHHHHHHHHcCCCeEEeec
Confidence 9999999999999999988853
|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=88.79 E-value=0.24 Score=49.93 Aligned_cols=91 Identities=12% Similarity=0.053 Sum_probs=62.7
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccc-cccc-cc--cccccCCCCHHHHHHHHHHc-CCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSG-FF--DTAVGNKRETPSYVEITNSL-GVD 449 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~-~f~~-~~--d~~~~~KP~p~~~~~~l~~l-~v~ 449 (500)
....||+.++|+.+. +.|.++|.|.+.+.++..+++.+ +-.. +|.. +| +..+. .|.+-++++ +-+
T Consensus 82 V~~RPgl~eFL~~ls-~~yEivIfTas~~~YA~~Vl~~L---Dp~~~~f~~Rl~sRd~cg~------~~~KdL~~ll~rd 151 (442)
T 3ef1_A 82 IKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKII---DPTGKLFQDRVLSRDDSGS------LAQKSLRRLFPCD 151 (442)
T ss_dssp EEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHH---CTTSTTTTTCEECTTTSSC------SSCCCGGGTCSSC
T ss_pred EEeCCCHHHHHHHHh-CCcEEEEEcCCCHHHHHHHHHHh---ccCCccccceEEEecCCCC------ceeeehHHhcCCC
Confidence 468899999999998 57999999999999999999988 4344 4554 33 22211 123334444 776
Q ss_pred CCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 450 KPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 450 ~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
.+.+++|+|++.-.. . .. ..|.|..+
T Consensus 152 -l~~vvIIDd~p~~~~-~--~p-N~I~I~~~ 177 (442)
T 3ef1_A 152 -TSMVVVIDDRGDVWD-W--NP-NLIKVVPY 177 (442)
T ss_dssp -CTTEEEEESCSGGGT-T--CT-TEEECCCC
T ss_pred -cceEEEEECCHHHhC-C--CC-CEEEcCCc
Confidence 899999999984221 1 13 56666543
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=87.28 E-value=1.4 Score=43.27 Aligned_cols=85 Identities=14% Similarity=0.131 Sum_probs=53.7
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCc---HHHHHHHHh-ccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGS---RLAQRLIFG-NSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~---~~~~~~~l~-~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
++||+.++|+.|+++|+++.++||++ .......++ .+| +.--.+.++.. ..+-.. | ++ . .+
T Consensus 30 ~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lg---i~~~~~~i~ts---~~~~~~-~---~~----~-~~ 94 (352)
T 3kc2_A 30 PIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLD---VDVSPLQIIQS---HTPYKS-L---VN----K-YS 94 (352)
T ss_dssp ECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHT---SCCCGGGEECT---TGGGGG-G---TT----T-CS
T ss_pred eCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcC---CCCChhhEeeh---HHHHHH-H---Hh----c-CC
Confidence 78999999999999999999999986 233333343 563 32223333311 111111 1 11 2 45
Q ss_pred cEEEEeCCHhhHHHHHHcCCcEEEE
Q 010820 453 EILFVTDVYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 453 ~~l~VGDs~~Di~aA~~aG~~~i~v 477 (500)
.+++||-. .-.+.++.+|+..+..
T Consensus 95 ~v~viG~~-~l~~~l~~~G~~~v~~ 118 (352)
T 3kc2_A 95 RILAVGTP-SVRGVAEGYGFQDVVH 118 (352)
T ss_dssp EEEEESST-THHHHHHHHTCSEEEE
T ss_pred EEEEECCH-HHHHHHHhCCCeEecc
Confidence 78888854 4556778899998864
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 500 | ||||
| d1zs9a1 | 253 | c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien | 3e-32 | |
| d2g80a1 | 225 | c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast | 2e-30 | |
| d1pvta_ | 232 | c.74.1.1 (A:) Putative sugar-phosphate aldolase {T | 1e-25 | |
| d1k0wa_ | 223 | c.74.1.1 (A:) L-ribulose-5-phosphate 4-epimerase { | 6e-25 | |
| d1ojra_ | 274 | c.74.1.1 (A:) L-rhamnulose-1-phosphate aldolase {E | 2e-18 | |
| d1e4cp_ | 206 | c.74.1.1 (P:) L-fuculose-1-phosphate aldolase {Esc | 5e-18 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 1e-05 | |
| d1zd3a1 | 225 | c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal | 5e-05 |
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Score = 121 bits (304), Expect = 3e-32
Identities = 95/246 (38%), Positives = 140/246 (56%), Gaps = 31/246 (12%)
Query: 285 RCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQG 344
I+LDIEGTTTPI+FV ++LFPY +NV ++L ++ E Q D+ LLR Q E+D
Sbjct: 8 TVILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQAEEDAHLD 67
Query: 345 VAGAVPIPPGDAGKE----------------------------EGHIWRTGFESNELEGE 376
A +P G+ + +GH+WR F + ++ E
Sbjct: 68 GAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTAGRMKAE 127
Query: 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRET 436
F DV A+ KW G KVYIYSSGS AQ+L+FG+S GD+ + + G FDT +G+K E+
Sbjct: 128 FFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVES 187
Query: 437 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHG--FKTI 494
SY +I +S+G + ILF+TDV +EA+AA+ A + V + +RPGN L ++ + I
Sbjct: 188 ESYRKIADSIGCS-TNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLI 246
Query: 495 NSFAEI 500
SF+E+
Sbjct: 247 TSFSEL 252
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 115 bits (288), Expect = 2e-30
Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 6/222 (2%)
Query: 285 RCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQG 344
+LDIEGT PISFV E LFPY + V + + + + + ++ L+
Sbjct: 4 STYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQAH 63
Query: 345 VAGAVPIPPGDA--GKEEGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGS 402
+ V D + +G++W G+ES +++ V+ D + +++ +
Sbjct: 64 ILELVAKDVKDPILKQLQGYVWAHGYESGQIKAPVYADAIDFIKRKKRVFIYSSGSVKAQ 123
Query: 403 RLAQ----RLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVT 458
+L + DL Y+ G+FD K+ K SE+LF++
Sbjct: 124 KLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANILRDIGAKASEVLFLS 183
Query: 459 DVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500
D E AA G+ ++ RPGN P+P+ ++ +F +
Sbjct: 184 DNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 225
|
| >d1pvta_ c.74.1.1 (A:) Putative sugar-phosphate aldolase {Thermotoga maritima [TaxId: 2336]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: AraD/HMP-PK domain-like superfamily: AraD/HMP-PK domain-like family: AraD-like aldolase/epimerase domain: Putative sugar-phosphate aldolase species: Thermotoga maritima [TaxId: 2336]
Score = 102 bits (255), Expect = 1e-25
Identities = 32/230 (13%), Positives = 77/230 (33%), Gaps = 22/230 (9%)
Query: 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDD--------------SIPKPQQLILMS 73
+ET I ++ G G+I++++ + P+ +L++
Sbjct: 4 RETIREIQKVAYWLAIKGLSEANAGNISVRLDERPEGYEVKSVNEYGFDYDGPEMYLLIT 63
Query: 74 PSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR--DAGAV 131
+G + + +D + + KP + +++ + A+
Sbjct: 64 ATGSRMREVYEDDSKICLLHVLPGKHYEILHGNGKPTSEFPTHLMIHAKFKEMNPEKKAI 123
Query: 132 IHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLA 191
+H+H + + + +E M++ + VV + + E L
Sbjct: 124 VHTHPLNLLTLMNLEE-FQELLPKMMKIHPEVLIFFPQGISVVEFEKPGSVELGL----- 177
Query: 192 KAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLG 241
K ++ AVL HG+ +G A + E + +++ LG
Sbjct: 178 KTVEKSEGKDAVLWDKHGVVAFGKDVAEAYDRVEILEKAAEILLRVLSLG 227
|
| >d1k0wa_ c.74.1.1 (A:) L-ribulose-5-phosphate 4-epimerase {Escherichia coli [TaxId: 562]} Length = 223 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: AraD/HMP-PK domain-like superfamily: AraD/HMP-PK domain-like family: AraD-like aldolase/epimerase domain: L-ribulose-5-phosphate 4-epimerase species: Escherichia coli [TaxId: 562]
Score = 100 bits (249), Expect = 6e-25
Identities = 36/216 (16%), Positives = 70/216 (32%), Gaps = 14/216 (6%)
Query: 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPED 86
+++ + + E V+ T G+++ + + ++ PSGV M +D
Sbjct: 2 LEDLKRQVLEANLALPKHNLVTLTWGNVSAVDRERG------VFVIKPSGVDYSIMTADD 55
Query: 87 MYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMIN 146
M V+S + + KP + G ++H+H + +
Sbjct: 56 MVVVSIETGEVVEGAKKPSSD-------TPTHRLLYQAFPSIGGIVHTHSRHATIWAQAG 108
Query: 147 PMSKEFRITHMEMIKG-IKGHGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLV 205
TH G I + + N + ++ K + VLV
Sbjct: 109 QSIPATGTTHANYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDAAQMPGVLV 168
Query: 206 RNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLG 241
+HG + WG + +A A + I QL
Sbjct: 169 HSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLA 204
|
| >d1ojra_ c.74.1.1 (A:) L-rhamnulose-1-phosphate aldolase {Escherichia coli [TaxId: 562]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: AraD/HMP-PK domain-like superfamily: AraD/HMP-PK domain-like family: AraD-like aldolase/epimerase domain: L-rhamnulose-1-phosphate aldolase species: Escherichia coli [TaxId: 562]
Score = 83.0 bits (204), Expect = 2e-18
Identities = 30/242 (12%), Positives = 70/242 (28%), Gaps = 43/242 (17%)
Query: 34 ISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQ---------------------LILM 72
+ + + GW GG++T+++ D I ++
Sbjct: 13 MIKATTDAWLKGWDERNGGNLTLRLDDADIAPYHDNFHQQPRYIPLSQPMPLLANTPFIV 72
Query: 73 SPSGVQKERMEPEDM-----YVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR- 126
+ SG ++ + + +G P + P ++ +R
Sbjct: 73 TGSGKFFRNVQLDPAANLGIVKVDSDGAGYHILWGLTNEAVP---TSELPAHFLSHCERI 129
Query: 127 -----DAGAVIHSHGIESCLVTMI-NPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT 180
++H H +T + + F E ++P
Sbjct: 130 KATNGKDRVIMHCHATNLIALTYVLENDTAVFTRQLWEGSTECLVVFPDGVGILP----- 184
Query: 181 AYENELTDSLAKAI-DAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQ 239
+ TD++ +A K + VL HG++ G + + +K++
Sbjct: 185 -WMVPGTDAIGQATAQEMQKHSLVLWPFHGVFGSGPTLDETFGLIDTAEKSAQVLVKVYS 243
Query: 240 LG 241
+G
Sbjct: 244 MG 245
|
| >d1e4cp_ c.74.1.1 (P:) L-fuculose-1-phosphate aldolase {Escherichia coli [TaxId: 562]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: AraD/HMP-PK domain-like superfamily: AraD/HMP-PK domain-like family: AraD-like aldolase/epimerase domain: L-fuculose-1-phosphate aldolase species: Escherichia coli [TaxId: 562]
Score = 80.3 bits (197), Expect = 5e-18
Identities = 33/215 (15%), Positives = 64/215 (29%), Gaps = 31/215 (14%)
Query: 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDM 87
+ I + C LG GT G+++++ D +L++P+G+ E++ +
Sbjct: 4 NKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQDG--------MLITPTGIPYEKLTESHI 55
Query: 88 YVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMIN 146
+ M AY+ R DA AV+H+H + V+++N
Sbjct: 56 VF----------IDGNGKHEEGKLPQSEWRFHMAAYQSRPDANAVVHNHAVHCTAVSILN 105
Query: 147 PMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVR 206
Y + A A L++
Sbjct: 106 RSIPAIHYMIAAAGGNSIPCAPYATFGTRELSEHVAL------------ALKNRKATLLQ 153
Query: 207 NHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLG 241
+HG+ + A A L + +
Sbjct: 154 HHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAIT 188
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 45.2 bits (106), Expect = 1e-05
Identities = 26/209 (12%), Positives = 57/209 (27%), Gaps = 35/209 (16%)
Query: 326 TQDDIKLLRSQVEDDLKQG---VAGAVPIPPGDAGKEEGHIWRTGFESNELEGEVFDDVP 382
+ + L+ + ++ + K ++TG+ E+ D+V
Sbjct: 162 SDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEIILRPVDEVK 221
Query: 383 EALEKWHSLGTKVYIYSSGSRLAQRLI---FGNSNYGDLRKYLSG--------------- 424
L G ++ I + + G Y + +
Sbjct: 222 VLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARP 281
Query: 425 --------FFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV- 475
+ GN R+ V+ ++ V D + +A+ G +
Sbjct: 282 LGKPNPFSYIAALYGNNRDKYESYINKQDNIVN-KDDVFIVGDSLADLLSAQKIGATFIG 340
Query: 476 ----ISIRPGNGPLPENHGFKTINSFAEI 500
+ + G L +H IN E+
Sbjct: 341 TLTGLKGKDAAGELEAHHADYVINHLGEL 369
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.5 bits (98), Expect = 5e-05
Identities = 32/227 (14%), Positives = 66/227 (29%), Gaps = 17/227 (7%)
Query: 285 RCIVLDIEGT---TTPISFVS--EVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVED 339
R V D++G + E R + T +K + +
Sbjct: 3 RAAVFDLDGVLALPAVFGVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITLSQW 62
Query: 340 DLKQGVAGAVPIPPGDAGKEEGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYS 399
+ + F+ ++ + +A G I +
Sbjct: 63 IPLMEENCRKCSETAKVCLPKNFSIKEIFDKAISARKINRPMLQAALMLRKKGFTTAILT 122
Query: 400 SGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVG------NKRETPSYVEITNSLGVDKPSE 453
+ + G + L L FD + K E Y + ++L PSE
Sbjct: 123 NTWLDDRAERDGLAQ---LMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKAS-PSE 178
Query: 454 ILFVTDVYQEATAAKAAGLEVVISIRPGNGP--LPENHGFKTINSFA 498
++F+ D+ A+ G+ ++ L + G + +N+ A
Sbjct: 179 VVFLDDIGANLKPARDLGMVTILVQDTDTALKELEKVTGIQLLNTPA 225
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 500 | |||
| d1e4cp_ | 206 | L-fuculose-1-phosphate aldolase {Escherichia coli | 100.0 | |
| d1ojra_ | 274 | L-rhamnulose-1-phosphate aldolase {Escherichia col | 100.0 | |
| d1pvta_ | 232 | Putative sugar-phosphate aldolase {Thermotoga mari | 100.0 | |
| d1k0wa_ | 223 | L-ribulose-5-phosphate 4-epimerase {Escherichia co | 100.0 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.96 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 99.94 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 99.94 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 99.93 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 99.92 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 99.92 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 99.91 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 99.91 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 99.91 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 99.9 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 99.9 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 99.89 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 99.89 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 99.89 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 99.88 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 99.88 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 99.83 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 99.83 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 99.82 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 99.78 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 99.78 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 99.76 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 99.71 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.68 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 99.64 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.59 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 99.57 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.53 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 99.49 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.45 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 99.44 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.4 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 98.98 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.81 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 98.73 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 98.67 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.56 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.41 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.38 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.3 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 98.24 | |
| d2bdea1 | 458 | Cytosolic IMP-GMP specific 5'-nucleotidase {Legion | 98.19 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.11 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.1 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 98.1 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.06 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.05 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 97.94 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 97.84 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 97.82 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 97.27 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 97.18 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 96.89 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 96.82 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 96.11 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 95.74 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 94.63 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 93.29 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 92.21 |
| >d1e4cp_ c.74.1.1 (P:) L-fuculose-1-phosphate aldolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: AraD/HMP-PK domain-like superfamily: AraD/HMP-PK domain-like family: AraD-like aldolase/epimerase domain: L-fuculose-1-phosphate aldolase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.7e-44 Score=330.48 Aligned_cols=200 Identities=21% Similarity=0.302 Sum_probs=176.6
Q ss_pred ccHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCC
Q 010820 25 RAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKP 104 (500)
Q Consensus 25 ~~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p 104 (500)
|+.+++|++|+++||.|+++||+.+++||||+|+++ .|||||||.++++++++||+.||++|+.++|. +|
T Consensus 1 m~~~~l~~~l~~~~r~l~~~Gl~~g~~GniS~R~~d--------~~lIt~sG~~~~~l~~~dlv~v~~~g~~~~g~--~p 70 (206)
T d1e4cp_ 1 MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQD--------GMLITPTGIPYEKLTESHIVFIDGNGKHEEGK--LP 70 (206)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTSCCTTCCEEEEEETT--------EEEECCTTCCGGGCCGGGCEEECTTCCBCTTC--CC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEeCC--------cEEEeCCCCChhhCCHHhcccccccccccccc--cc
Confidence 678899999999999999999999999999999976 79999999999999999999999999998874 45
Q ss_pred CCCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeC-CCC
Q 010820 105 YPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIEN-TAY 182 (500)
Q Consensus 105 ~~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~-~~~ 182 (500)
|+|+.+|..||+.| |++||+|+||+|++++|+.... ++....+....+++ .++++|| .|+
T Consensus 71 --------s~e~~~H~~iy~~rpdv~avvH~H~~~~~a~s~~~~~---~~~~~~~~~~~~~~-------~~~~~~y~~~g 132 (206)
T d1e4cp_ 71 --------QSEWRFHMAAYQSRPDANAVVHNHAVHCTAVSILNRS---IPAIHYMIAAAGGN-------SIPCAPYATFG 132 (206)
T ss_dssp --------CTTHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCC---BCSSSGGGGGGTSS-------CBCEECCCCTT
T ss_pred --------chhHHHHHHHHHhccCcceEEEecCcceeeehhhcCC---CCchhHHHHHHcCC-------ceeecCCcCCc
Confidence 89999999999999 9999999999999999999753 33333323222222 3888998 568
Q ss_pred chhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccc
Q 010820 183 ENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNF 255 (500)
Q Consensus 183 ~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~ 255 (500)
+.++++.++++++++ +++||+|||+++||+|+++||.+++.+|++|++++.++++|.+.+.+++++++++
T Consensus 133 ~~~~~~~~~~~l~~~---~~~ll~nHG~~~~G~s~~eA~~~~~~lE~~a~~~l~a~~~G~~~~~l~~ee~~~~ 202 (206)
T d1e4cp_ 133 TRELSEHVALALKNR---KATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAITDPVPVLSDEEIAVV 202 (206)
T ss_dssp CHHHHHHHHHHTSSC---SEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCSSCCCCCHHHHHHH
T ss_pred chhHHHHHHHHHhcC---CceeecCcccEEEcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCHHHHHHH
Confidence 999999999999875 9999999999999999999999999999999999999999998877777777654
|
| >d1ojra_ c.74.1.1 (A:) L-rhamnulose-1-phosphate aldolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: AraD/HMP-PK domain-like superfamily: AraD/HMP-PK domain-like family: AraD-like aldolase/epimerase domain: L-rhamnulose-1-phosphate aldolase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=5e-42 Score=329.71 Aligned_cols=213 Identities=13% Similarity=0.142 Sum_probs=172.1
Q ss_pred cHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCC---------------------CCCccEEEEecCCCCcCCCCC
Q 010820 26 AVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSI---------------------PKPQQLILMSPSGVQKERMEP 84 (500)
Q Consensus 26 ~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~---------------------~~~~~~~~itpsg~~~~~l~~ 84 (500)
....++++|++++|.+|++||+++++||||||++++++ ...+++|||||||++++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~G~~~~~gGNiSvR~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~g~~~lITpSG~~~~~l~~ 84 (274)
T d1ojra_ 5 TQSWFVQGMIKATTDAWLKGWDERNGGNLTLRLDDADIAPYHDNFHQQPRYIPLSQPMPLLANTPFIVTGSGKFFRNVQL 84 (274)
T ss_dssp GGSHHHHHHHHHHHHHHHHTCCCTTCCEEEEECCHHHHGGGGGGSCSSCEEEECSSCCGGGTTCEEEEEBTTCCGGGTTT
T ss_pred chHHHHHHHHHHHHHHHHcCCcccCCCeEEEEcCccccccccccccccccccccccccccccCCeEEEeCCCcccCcCCc
Confidence 45678999999999999999999999999999864211 012468999999999999999
Q ss_pred CC-----EEEEeCCCCccc------CCCCCCCCCCCCCCCCChHHHHHHHhhC------CccEEEecCchHHHHHHhhcC
Q 010820 85 ED-----MYVLSGNGTTLS------SPSPKPYPHKPPKCSDCAPLFMKAYEKR------DAGAVIHSHGIESCLVTMINP 147 (500)
Q Consensus 85 ~d-----i~~vd~~g~~~~------g~~~~p~~~~p~~~S~e~~~H~~iy~~~------~~~av~H~H~~~~~a~s~~~~ 147 (500)
+| |++||.||++++ |. .+| |+|+.||++|||.| |++||||+||+|++++|+...
T Consensus 85 ~d~~~~~iv~vd~dG~~~~~~~~~~~~-~kP--------SsE~~lH~~iyr~R~~~~~Pdv~aVvHtH~~~~~alS~~~~ 155 (274)
T d1ojra_ 85 DPAANLGIVKVDSDGAGYHILWGLTNE-AVP--------TSELPAHFLSHCERIKATNGKDRVIMHCHATNLIALTYVLE 155 (274)
T ss_dssp CHHHHEEEEEECTTSSEEEEEEECTTT-CCB--------CTTHHHHHHHHHHHHHHTTTCCCEEEEECCHHHHHHTTTSC
T ss_pred chhcccceEEECCCCCEEecccccCCC-CCC--------chHHHHHHHHHHHHhhccCCCceEEEEeCCchHHHHHhccc
Confidence 97 899999999863 32 344 99999999999963 999999999999999999865
Q ss_pred CCcc-----cccchhhHhhhhcCCcccCcceeeeeeC-CCCchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHH
Q 010820 148 MSKE-----FRITHMEMIKGIKGHGYYDELVVPIIEN-TAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAK 221 (500)
Q Consensus 148 ~~~~-----~~~~~~~~~~~~~g~~~~~~~~vp~~~~-~~~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~ 221 (500)
.... ++....+....+.+ .||++|| .|++.++++.++++++++ +++||+|||+++||+|+++||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~-------~i~~~py~~pgs~ela~~v~~~l~d~---~avLL~nHGvv~~G~sl~eA~ 225 (274)
T d1ojra_ 156 NDTAVFTRQLWEGSTECLVVFPD-------GVGILPWMVPGTDAIGQATAQEMQKH---SLVLWPFHGVFGSGPTLDETF 225 (274)
T ss_dssp SCHHHHHHHHHHTSTTHHHHCTT-------CEEECCCCCSSSHHHHHHHHHHHTTC---SEEEETTTEEEEEESSHHHHH
T ss_pred cchhhhhccccccccceeEEecC-------ccceecCcCCCCHHHHHHHHHHcCCC---eEEEeeccCCeEecCCHHHHH
Confidence 3211 11111122222222 4999999 569999999999999975 999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccc
Q 010820 222 TQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL 257 (500)
Q Consensus 222 ~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~ 257 (500)
.+++.+|++|++++.++++|......++++++++..
T Consensus 226 ~~~e~lE~~A~i~l~a~~~G~~~~~l~~eei~~l~~ 261 (274)
T d1ojra_ 226 GLIDTAEKSAQVLVKVYSMGGMKQTISREELIALGK 261 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 999999999999999999997544445557766543
|
| >d1pvta_ c.74.1.1 (A:) Putative sugar-phosphate aldolase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: AraD/HMP-PK domain-like superfamily: AraD/HMP-PK domain-like family: AraD-like aldolase/epimerase domain: Putative sugar-phosphate aldolase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=5.4e-40 Score=309.04 Aligned_cols=199 Identities=17% Similarity=0.239 Sum_probs=165.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCC--------------CCCccEEEEecCCCCcCCCCCCCEEEEeC
Q 010820 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSI--------------PKPQQLILMSPSGVQKERMEPEDMYVLSG 92 (500)
Q Consensus 27 ~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~--------------~~~~~~~~itpsg~~~~~l~~~di~~vd~ 92 (500)
.++++++|++++|.|+++||+.+++||||+|+++++. ....++|||||||.++++|+++|++.|++
T Consensus 3 ~~e~~~el~~~~~~l~~~Gl~~~~~GNiS~R~~~~~~~~~~~~~~~~~~~~~~~~~~~lItpsG~~~~~l~~~d~~~~~l 82 (232)
T d1pvta_ 3 MRETIREIQKVAYWLAIKGLSEANAGNISVRLDERPEGYEVKSVNEYGFDYDGPEMYLLITATGSRMREVYEDDSKICLL 82 (232)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSBTTBEEEEEEESSCCSSCCCCEEEEEEEEECSCCEEEEEEBTTCCHHHHTTCGGGEEEE
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCccccccccccccccccCcCCEEEEeCCCCcHhhCCHhHceEEEE
Confidence 5788999999999999999999999999999987421 12345799999999999999999888776
Q ss_pred C------CCcccCCCCCCCCCCCCCCCCChHHHHHHHhh----C-CccEEEecCchHHHHHHhhcCCCcccc---cchhh
Q 010820 93 N------GTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEK----R-DAGAVIHSHGIESCLVTMINPMSKEFR---ITHME 158 (500)
Q Consensus 93 ~------g~~~~g~~~~p~~~~p~~~S~e~~~H~~iy~~----~-~~~av~H~H~~~~~a~s~~~~~~~~~~---~~~~~ 158 (500)
+ |++++|. .+| |+|+.+|+.||++ | |++||+|+||+|++++++.......++ ....+
T Consensus 83 ~~~~~~~~~~~~G~-~kP--------SsE~~~H~~iy~~~~~~rPdv~aVvH~H~~~~~a~s~~~~~~~~~~~~~~~~~e 153 (232)
T d1pvta_ 83 HVLPGKHYEILHGN-GKP--------TSEFPTHLMIHAKFKEMNPEKKAIVHTHPLNLLTLMNLEEFQELLPKMMKIHPE 153 (232)
T ss_dssp EECSEEEEEEEECS-SCB--------CTTHHHHHHHHHHHHHSCTTCCEEEEECCHHHHHHTTSGGGTTTHHHHTTSSHH
T ss_pred ecccCCCCceecCC-CCc--------CccchhhHHHHHHHHhcCCCceEEEEcCCHHHHHHHhcccccccchhhhhhhhh
Confidence 4 5677886 356 9999999999985 7 999999999999999998864322222 12333
Q ss_pred HhhhhcCCcccCcceeeeeeC-CCCchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHH
Q 010820 159 MIKGIKGHGYYDELVVPIIEN-TAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKL 237 (500)
Q Consensus 159 ~~~~~~g~~~~~~~~vp~~~~-~~~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a 237 (500)
....+++ .||++|| .|++.++++.+++++++ .+++||+|||+++||+|+++||.+++++|++|++++.+
T Consensus 154 ~~~~~~~-------~i~v~~y~~pg~~ela~~~~~~l~~---~~~vll~nHGv~~~G~s~~eA~~~~~~lE~~a~~~l~a 223 (232)
T d1pvta_ 154 VLIFFPQ-------GISVVEFEKPGSVELGLKTVEKSEG---KDAVLWDKHGVVAFGKDVAEAYDRVEILEKAAEILLRV 223 (232)
T ss_dssp HHHHCSS-------CCEEECCCSTTCHHHHHHHHHHTSS---CSEEEETTSCEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred hheeecC-------ceeecccccchhHHHHHHHHHhhCC---CCEEEECCCCcEEEcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3332322 3999999 57899999999999986 49999999999999999999999999999999999999
Q ss_pred HhcCCCC
Q 010820 238 HQLGLDW 244 (500)
Q Consensus 238 ~~~g~~~ 244 (500)
+++|..+
T Consensus 224 ~~~G~~p 230 (232)
T d1pvta_ 224 LSLGRNP 230 (232)
T ss_dssp HTTTCSC
T ss_pred HHcCCCC
Confidence 9999753
|
| >d1k0wa_ c.74.1.1 (A:) L-ribulose-5-phosphate 4-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: AraD/HMP-PK domain-like superfamily: AraD/HMP-PK domain-like family: AraD-like aldolase/epimerase domain: L-ribulose-5-phosphate 4-epimerase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=5.9e-39 Score=301.07 Aligned_cols=201 Identities=20% Similarity=0.278 Sum_probs=164.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCC-CCcccCCCCCCC
Q 010820 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN-GTTLSSPSPKPY 105 (500)
Q Consensus 27 ~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~-g~~~~g~~~~p~ 105 (500)
.+++|++|++++++|+++||+.+++||||+|++++ +.|||||||+++++++++||++||++ +++++|. .+|
T Consensus 2 ~~~l~~~~~~a~~~l~~~glv~~~~GNiSvr~~~~------~~~~It~sG~~~~~l~~~d~~~vd~~~~~~~~g~-~~~- 73 (223)
T d1k0wa_ 2 LEDLKRQVLEANLALPKHNLVTLTWGNVSAVDRER------GVFVIKPSGVDYSIMTADDMVVVSIETGEVVEGA-KKP- 73 (223)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCCTTCCEEEEEETTT------TEEEECBSSCCTTTCCGGGCEEEETTTCCEEECS-SCB-
T ss_pred hHHHHHHHHHHHHHHHHCcCccCCCCeEEEEecCC------CEEEEeCCCCChhhCChhHeEEEEcccccccccc-ccc-
Confidence 46799999999999999999999999999999763 59999999999999999999999987 4666765 344
Q ss_pred CCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeC-----
Q 010820 106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIEN----- 179 (500)
Q Consensus 106 ~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~----- 179 (500)
|+|+.+|..||+.+ |++||+|+||++++++|+.... .+.........+.+. +++.++
T Consensus 74 -------s~e~~~H~~i~~~~pd~~aviH~H~~~~~a~s~~~~~---~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 136 (223)
T d1k0wa_ 74 -------SSDTPTHRLLYQAFPSIGGIVHTHSRHATIWAQAGQS---IPATGTTHANYFYGT-------IPCTRKMTDAE 136 (223)
T ss_dssp -------CTTHHHHHHHHHHCTTCCEEEECCCHHHHHHHHHTCC---BCCCSHHHHTTCSSC-------BCBCCCCCHHH
T ss_pred -------cchhhHHHHHHhhCCCcccccccCCcceehhhhhccc---cccchHHHHHHhCCc-------eeeeccccccc
Confidence 89999999999999 9999999999999999998753 222222222222221 333322
Q ss_pred --CCCchhHHHHHHHHHhhC----CCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCc
Q 010820 180 --TAYENELTDSLAKAIDAY----PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPT 252 (500)
Q Consensus 180 --~~~~~~l~~~v~~~l~~~----~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~ 252 (500)
.++..++++.+++.+++. ++.++|||+|||+++||+|+++||.+++.+|++|++++.++++|.+.+..+++.+
T Consensus 137 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~vll~nHG~~~~G~s~~eA~~~~~~lE~~a~~~~~a~~~g~~~~~~~~e~~ 215 (223)
T d1k0wa_ 137 INGEYEWETGNVIVETFEKQGIDAAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLL 215 (223)
T ss_dssp HHSSHHHHHHHHHHHHHHHTTCCTTTCCEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCCCHHHH
T ss_pred cccccchhhHHHHHHHHHHhhhhccCCCEEEEeCceeEEecCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCHHHH
Confidence 235778888999988863 5678999999999999999999999999999999999999999987665555443
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=7.4e-29 Score=234.07 Aligned_cols=218 Identities=44% Similarity=0.768 Sum_probs=162.1
Q ss_pred CCceEEEEecCCcccccccccccchHhHHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCChhh-
Q 010820 282 LFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEE- 360 (500)
Q Consensus 282 ~~~k~vlFD~DGTL~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 360 (500)
..+++|+||+||||+|++++++.+++++.+.+..++...+...........++..........................
T Consensus 5 ~~i~~vlfD~dGTl~~~~~v~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (253)
T d1zs9a1 5 AEVTVILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQAEEDAHLDGAVPIPAASGNGVDDLQ 84 (253)
T ss_dssp TTCCEEEECCBTTTBCHHHHHHTHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHTTTSTTCCCCCCCSCSSHHHHH
T ss_pred CCCCEEEEeCcCCCccchhhhhhhhHHHHHHHHHHHHHhcCChhHHHHHHHHHHhhhhhhhhhhhhhhhhhhhcchhhHH
Confidence 5789999999999999888889898888888887777666655555555555544433222111111111111110000
Q ss_pred ---------------------------HHHHHHhhcccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhcc
Q 010820 361 ---------------------------GHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 413 (500)
Q Consensus 361 ---------------------------~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~ 413 (500)
...+...|........++||+.++|++|+++|++++|+||+....+...++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~ 164 (253)
T d1zs9a1 85 QMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTAGRMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHS 164 (253)
T ss_dssp HHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTB
T ss_pred HhHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHhhhcccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHc
Confidence 22233444445556789999999999999999999999999999999999999
Q ss_pred CcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCC--c
Q 010820 414 NYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHG--F 491 (500)
Q Consensus 414 ~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~--~ 491 (500)
++.++.+.+...++.....||+|.+|..++++++++ |++|+||||+.+|+.+|+++||++|+|+++++........ +
T Consensus 165 ~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~-p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~ 243 (253)
T d1zs9a1 165 TEGDILELVDGHFDTKIGHKVESESYRKIADSIGCS-TNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYY 243 (253)
T ss_dssp TTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSC-GGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHS
T ss_pred CcchhhhhcceeeccccccCCCcHHHHHHHHHhCCC-cCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCC
Confidence 655555555555566667899999999999999998 9999999999999999999999999999987654433322 7
Q ss_pred eeeCCccCC
Q 010820 492 KTINSFAEI 500 (500)
Q Consensus 492 ~~i~~l~el 500 (500)
.+|+||.||
T Consensus 244 ~~i~sl~EL 252 (253)
T d1zs9a1 244 SLITSFSEL 252 (253)
T ss_dssp CEESSGGGC
T ss_pred cEECChHHh
Confidence 899999997
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=99.94 E-value=9.5e-27 Score=214.40 Aligned_cols=199 Identities=14% Similarity=0.136 Sum_probs=146.0
Q ss_pred CCceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCChh
Q 010820 282 LFPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKE 359 (500)
Q Consensus 282 ~~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (500)
|++|+|+||+||||+ |+...+ +++.+...++..+... ......+....+.+.... .. ......
T Consensus 1 M~~k~viFD~DGTL~------ds~~~~~~a~~~~~~~~g~~~~~~-------~~~~~~~~~~~~~~~~~~-~~-~~~~~~ 65 (207)
T d2hdoa1 1 MTYQALMFDIDGTLT------NSQPAYTTVMREVLATYGKPFSPA-------QAQKTFPMAAEQAMTELG-IA-ASEFDH 65 (207)
T ss_dssp CCCSEEEECSBTTTE------ECHHHHHHHHHHHHHTTTCCCCHH-------HHHHHTTSCHHHHHHHTT-CC-GGGHHH
T ss_pred CCCcEEEEeCCCCcC------cCHHHHHHHHHHHHHHcCCCCCHH-------HHHHHhcchhhhhhhccc-cc-hhhHHH
Confidence 679999999999999 554433 5566666665543321 222223222222222211 11 111112
Q ss_pred hHHHHHHhhcccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHH
Q 010820 360 EGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETP 437 (500)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~ 437 (500)
....+.+.+.+.....+++||+.++|+.|++ +++++|+||+....+...++++ ++..+|+.++ +.....||+|+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~KP~p~ 141 (207)
T d2hdoa1 66 FQAQYEDVMASHYDQIELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSY---PFMMRMAVTISADDTPKRKPDPL 141 (207)
T ss_dssp HHHHHHHHHTTCGGGCEECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTS---GGGGGEEEEECGGGSSCCTTSSH
T ss_pred HHHHhhhhhcccccccccccchhhhhhhhcc-cccccccccccccccccccccc---cccccccccccccccccchhhhh
Confidence 2444555666666667899999999999975 6999999999999999999999 6677888777 44677899999
Q ss_pred HHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 438 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 438 ~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
+|+.++++++++ |++|+||||+.+|+.+|+++||.+|++.++..........+++|+++.||
T Consensus 142 ~~~~~~~~~~~~-~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i~~l~dl 203 (207)
T d2hdoa1 142 PLLTALEKVNVA-PQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDI 203 (207)
T ss_dssp HHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGG
T ss_pred hhcccccceeee-ccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEeCCHHHH
Confidence 999999999998 99999999999999999999999999998755444434448999998875
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=4.1e-27 Score=218.42 Aligned_cols=122 Identities=20% Similarity=0.237 Sum_probs=108.2
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
.+++||+.++|+.|+++|++++|+||+++..+..+++.+ ++.++|+.++ +.....||+|++|+.++++++++ |+
T Consensus 87 ~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~---~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~-~~ 162 (218)
T d1te2a_ 87 RPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMF---DLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVD-PL 162 (218)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT---TCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSC-GG
T ss_pred ccccchHHHHHHHhhhccccccccccccccccccccccc---cccccccccccccccccchhhHHHHHHHHHHcCCC-ch
Confidence 468999999999999999999999999999999999999 6788888887 45677899999999999999998 99
Q ss_pred cEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCC-CCCceeeCCccCC
Q 010820 453 EILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPE-NHGFKTINSFAEI 500 (500)
Q Consensus 453 ~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~-~~~~~~i~~l~el 500 (500)
+|+||||+.+|+.+|+++|+++|+|.++....... ..++++|+||.||
T Consensus 163 ~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l~el 211 (218)
T d1te2a_ 163 TCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTEL 211 (218)
T ss_dssp GEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGC
T ss_pred hcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECChhhC
Confidence 99999999999999999999999998764433332 2349999999986
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=99.93 E-value=2.9e-26 Score=213.03 Aligned_cols=125 Identities=20% Similarity=0.223 Sum_probs=110.4
Q ss_pred CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCC
Q 010820 372 ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVD 449 (500)
Q Consensus 372 ~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~ 449 (500)
.....++||+.++|+.|+++|++++|+||++...+..+++++ |+.++|+.++ +.....||+|++|..++++++++
T Consensus 91 ~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~---gl~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~ 167 (224)
T d2hsza1 91 CNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAF---GIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLY 167 (224)
T ss_dssp TSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT---TCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCC
T ss_pred ccccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhc---CchhhccccccccccccccccchhhHHHHHHhhhh
Confidence 345679999999999999999999999999999999999999 7788888877 44677899999999999999998
Q ss_pred CCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCC-CCC-CCceeeCCccCC
Q 010820 450 KPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPL-PEN-HGFKTINSFAEI 500 (500)
Q Consensus 450 ~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~-~~~-~~~~~i~~l~el 500 (500)
|++|+||||+.+|+.+|+++|+.+|++.++..... ... .++++|+|+.||
T Consensus 168 -~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL 219 (224)
T d2hsza1 168 -PKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADI 219 (224)
T ss_dssp -GGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGG
T ss_pred -hhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHH
Confidence 99999999999999999999999999999854332 222 349999999886
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=99.92 E-value=3.6e-25 Score=210.66 Aligned_cols=106 Identities=16% Similarity=0.140 Sum_probs=95.0
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccc-cccc--cccccCCCCHHHHHHHHHHcCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL-SGFF--DTAVGNKRETPSYVEITNSLGVDK 450 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f-~~~~--d~~~~~KP~p~~~~~~l~~l~v~~ 450 (500)
...++||+.++|+.|+++|++++|+||+++..+..+++.+ ++..+| +.++ +.....||+|++|..+++++++.|
T Consensus 97 ~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~---~l~~~f~d~~~~~d~~~~~KP~p~~~~~~~~~l~~~p 173 (257)
T d1swva_ 97 YASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEA---ALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYP 173 (257)
T ss_dssp GCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHH---HHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCS
T ss_pred cCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHH---hhcccccccccccccccccccChHHHHHHHHHhCCCC
Confidence 3579999999999999999999999999999999999999 667775 4444 446678999999999999999974
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCC
Q 010820 451 PSEILFVTDVYQEATAAKAAGLEVVISIRPGN 482 (500)
Q Consensus 451 p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~ 482 (500)
+++|+||||+..|+.+|+++||.+|+|.++..
T Consensus 174 ~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~ 205 (257)
T d1swva_ 174 MNHMIKVGDTVSDMKEGRNAGMWTVGVILGSS 205 (257)
T ss_dssp GGGEEEEESSHHHHHHHHHTTSEEEEECTTCT
T ss_pred cceEEEEeCChhhHHHHHHCCCEEEEEccCCC
Confidence 69999999999999999999999999998854
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.92 E-value=1.8e-25 Score=205.22 Aligned_cols=191 Identities=10% Similarity=0.162 Sum_probs=132.6
Q ss_pred eEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCChhhHH
Q 010820 285 RCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEGH 362 (500)
Q Consensus 285 k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (500)
++++||+||||+ |+...+ +++.+...++....... . .....+......+......... .......
T Consensus 2 ~a~iFD~DGTL~------ds~~~~~~a~~~~~~~~g~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 68 (204)
T d2go7a1 2 TAFIWDLDGTLL------DSYEAILSGIEETFAQFSIPYDKEK---V---REFIFKYSVQDLLVRVAEDRNL-DVEVLNQ 68 (204)
T ss_dssp CEEEECTBTTTE------ECHHHHHHHHHHHHHHHTCCCCHHH---H---HHHHHHSCHHHHHHHHHHHHTC-CHHHHHH
T ss_pred EEEEEcCCCcCc------cCHHHHHHHHHHHHHHcCCCCCHHH---H---HHhhcccccccccccccchhhh-hHHHHHH
Confidence 689999999999 654433 55665566665433211 1 1111122222222222110000 1111133
Q ss_pred HHHHhhcccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHH
Q 010820 363 IWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYV 440 (500)
Q Consensus 363 ~~~~~~~~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~ 440 (500)
.+...+.+......++||+.++|+.|+++|++++|+||+... +..+++++ ++.++|+.++ +.....||+|++|+
T Consensus 69 ~~~~~~~~~~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~~-~~~~l~~~---gl~~~f~~i~~s~~~~~~Kp~~~~~~ 144 (204)
T d2go7a1 69 VRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNN-AFTILKDL---GVESYFTEILTSQSGFVRKPSPEAAT 144 (204)
T ss_dssp HHHHHHTTCGGGCEECTTHHHHHHHHHHTTCEEEEECSSCTH-HHHHHHHH---TCGGGEEEEECGGGCCCCTTSSHHHH
T ss_pred HHHHHHHhhcccCcccchHHhhhhcccccccchhhhcccchh-hhhhhhhc---ccccccccccccccccccchhHHHHH
Confidence 334444455556789999999999999999999999998764 55678888 6788888887 44677899999999
Q ss_pred HHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccC
Q 010820 441 EITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE 499 (500)
Q Consensus 441 ~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e 499 (500)
.++++++++ |++|+||||+.+|+.+|+++||++|++.++... .++.++++.+
T Consensus 145 ~~~~~~~~~-p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~~~------~~~~~~~~~d 196 (204)
T d2go7a1 145 YLLDKYQLN-SDNTYYIGDRTLDVEFAQNSGIQSINFLESTYE------GNHRIQALAD 196 (204)
T ss_dssp HHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEESSCCSCT------TEEECSSTTH
T ss_pred HHHHHhCCC-CceEEEEeCCHHHHHHHHHcCCeEEEEcCCCCC------cCeecCCHHH
Confidence 999999998 999999999999999999999999999876331 3566666554
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.91 E-value=2.2e-25 Score=205.28 Aligned_cols=198 Identities=16% Similarity=0.199 Sum_probs=143.6
Q ss_pred CceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCChhh
Q 010820 283 FPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEE 360 (500)
Q Consensus 283 ~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (500)
++|+|+||+||||+ |+...+ +++.....++.... ..+.++...+......+...+... .....
T Consensus 3 ~ik~VifD~DGTL~------ds~~~~~~a~~~~~~~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 67 (210)
T d2ah5a1 3 SITAIFFDLDGTLV------DSSIGIHNAFTYTFKELGVPSP------DAKTIRGFMGPPLESSFATCLSKD---QISEA 67 (210)
T ss_dssp TCCEEEECSBTTTE------ECHHHHHHHHHHHHHHHTCCCC------CHHHHHHTSSSCHHHHHHTTSCGG---GHHHH
T ss_pred CCCEEEEeCCCccc------cCHHHHHHHHHHHHHHCCCCCC------CHHHHHHhhhcchhhhccccccch---hhHHH
Confidence 58999999999999 554443 55555555554422 133445554444444444333211 11111
Q ss_pred HHHHHHhhccc-CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHH
Q 010820 361 GHIWRTGFESN-ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSY 439 (500)
Q Consensus 361 ~~~~~~~~~~~-~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~ 439 (500)
...+...+... .....++||+.++|+.|+.+ ++++|+||++....+..++.+ ++..+|+.++......||+|++|
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~---gl~~~fd~v~~~~~~~~~~p~~~ 143 (210)
T d2ah5a1 68 VQIYRSYYKAKGIYEAQLFPQIIDLLEELSSS-YPLYITTTKDTSTAQDMAKNL---EIHHFFDGIYGSSPEAPHKADVI 143 (210)
T ss_dssp HHHHHHHHHHTGGGSCEECTTHHHHHHHHHTT-SCEEEEEEEEHHHHHHHHHHT---TCGGGCSEEEEECSSCCSHHHHH
T ss_pred HHHHHHHHHhhhhhcccchhHHHHHHhhhhcc-cchhhcccccchhhhHHHHhh---ccccccccccccccccccccccc
Confidence 23333333322 33468999999999999876 589999999999999999999 77888988885555679999999
Q ss_pred HHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCC-CCCCCCC-CCceeeCCccCC
Q 010820 440 VEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPG-NGPLPEN-HGFKTINSFAEI 500 (500)
Q Consensus 440 ~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~-~~~~~~~-~~~~~i~~l~el 500 (500)
..++++++++ |++|+||||+.+|+.+|+++|+++++|.++. ..+.+.. .++++++++.||
T Consensus 144 ~~~~~~~~~~-~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el 205 (210)
T d2ah5a1 144 HQALQTHQLA-PEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEV 205 (210)
T ss_dssp HHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHH
T ss_pred chhhhhhhcc-cccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHH
Confidence 9999999998 9999999999999999999999999999873 3333333 349999999875
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.91 E-value=9.4e-25 Score=204.26 Aligned_cols=121 Identities=15% Similarity=0.149 Sum_probs=107.2
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
..++||+.++|+.|+ +|++++++||++...+..+++.+ ++.++|+.++ +.....||+|++|..++++++++ |+
T Consensus 99 ~~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~---gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~-p~ 173 (230)
T d1x42a1 99 GELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDAL---GIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVK-GE 173 (230)
T ss_dssp CCBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHH---TCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCC-GG
T ss_pred CcccccHHHHHHHhh-ccCceeeeeccccccchhhhccc---ccccccccccccccccccchhhHHHHHHHhhhccc-cc
Confidence 468999999999997 57999999999999999999999 6788888888 44677899999999999999998 99
Q ss_pred cEEEEeCCH-hhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 453 EILFVTDVY-QEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 453 ~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
+|+||||+. +|+++|+++|+.++++++.+........++++|+|++||
T Consensus 174 ~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~l~el 222 (230)
T d1x42a1 174 EAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREV 222 (230)
T ss_dssp GEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESSTTHH
T ss_pred ccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECCHHHH
Confidence 999999996 899999999999999998766555554559999999875
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.91 E-value=1.2e-24 Score=201.69 Aligned_cols=213 Identities=32% Similarity=0.580 Sum_probs=143.0
Q ss_pred CceEEEEecCCcccccccccccchHhHHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCCh-h-h
Q 010820 283 FPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGK-E-E 360 (500)
Q Consensus 283 ~~k~vlFD~DGTL~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~ 360 (500)
++++|+||+||||+|+.++++.+++++.+.+..++...+...........+......................... . .
T Consensus 2 ~~~~~lfD~dGTl~d~~~v~d~lfp~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (225)
T d2g80a1 2 NYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQAHILELVAKDVKDPILKQLQ 81 (225)
T ss_dssp CCSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSCCTTSHHHHHHHTTCCCCHHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred CCCEEEEcCCCCCcccHhhhhhhhHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhHHHHHHHHHHHhhhhhhhHHHHHHH
Confidence 6899999999999998888888888888888887766554332221111111101111111111111111111111 1 1
Q ss_pred HHHHHHhhcccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhcc--------Ccccccccccccc-ccccc
Q 010820 361 GHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS--------NYGDLRKYLSGFF-DTAVG 431 (500)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~--------~~~~l~~~f~~~~-d~~~~ 431 (500)
...++..+........+++++.+++.. +..+++.|+............. ...++.++|+.++ +....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~~~~~ 157 (225)
T d2g80a1 82 GYVWAHGYESGQIKAPVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSG 157 (225)
T ss_dssp HHHHHHHHHTTSCCBCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHC
T ss_pred HHHHHHHHHhhcccccchhhHHHHHhh----HHhhhhhhhccchhhhhhhhhhhhhHHHHHHhcCCccccceeeeccccC
Confidence 333444555555556677777776654 4568899998887766554221 1226777888777 33445
Q ss_pred CCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 432 NKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 432 ~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
.||+|++|..+++++|++ |++|+||||+.+|+.+|+++||++|+|+|+++.+.....+..+|.+|.||
T Consensus 158 ~KP~p~~f~~~~~~lg~~-p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r~g~~~~~~~~~~~~i~~~~eL 225 (225)
T d2g80a1 158 KKTETQSYANILRDIGAK-ASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 225 (225)
T ss_dssp CTTCHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred CCCChhHhHHHHHhcccC-chhceeecCCHHHHHHHHHcCCEEEEEeCCCCCCCcccCCCCccCChhhC
Confidence 799999999999999998 99999999999999999999999999999877666555567889999987
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=99.90 E-value=2.2e-24 Score=199.84 Aligned_cols=123 Identities=25% Similarity=0.295 Sum_probs=108.6
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
...++|++.++|+.|++.|++++++||+....+...+++. ++..+|+.++ +.....||+|++|+.+++++|++ |
T Consensus 91 ~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~---~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~-p 166 (220)
T d1zrna_ 91 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHA---GLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLD-R 166 (220)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT---TCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSC-G
T ss_pred cccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhc---cccccccceeeeeeeeccccHHHHHHHHHHHhCCC-C
Confidence 4578999999999999999999999999999999999988 6778888887 44677899999999999999998 9
Q ss_pred CcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCC-CCCCCceeeCCccCC
Q 010820 452 SEILFVTDVYQEATAAKAAGLEVVISIRPGNGPL-PENHGFKTINSFAEI 500 (500)
Q Consensus 452 ~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~-~~~~~~~~i~~l~el 500 (500)
++|+||||+..|+.+|+++||++|++++++.... ....++++|+||.||
T Consensus 167 ~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~l~el 216 (220)
T d1zrna_ 167 SAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAV 216 (220)
T ss_dssp GGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHH
T ss_pred ceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEECCHHHH
Confidence 9999999999999999999999999998744333 333459999999875
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.90 E-value=9.3e-24 Score=198.75 Aligned_cols=122 Identities=20% Similarity=0.232 Sum_probs=104.4
Q ss_pred cccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCC
Q 010820 373 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDK 450 (500)
Q Consensus 373 ~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~ 450 (500)
....++|++.++|++|+ ++.++++||+....+...+++. ++..+|+.++ +.....||+|++|..+++++|++
T Consensus 90 ~~~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~---~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~- 163 (245)
T d1qq5a_ 90 NRLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANA---GLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVT- 163 (245)
T ss_dssp GSCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHT---TCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCC-
T ss_pred cccccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhc---ccccccccccccccccccCccHHHHHHHHHHhCCC-
Confidence 34578999999999986 6899999999999999999998 6778888777 55677899999999999999998
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCC------------------------CCCCCCCCceeeCCccCC
Q 010820 451 PSEILFVTDVYQEATAAKAAGLEVVISIRPGN------------------------GPLPENHGFKTINSFAEI 500 (500)
Q Consensus 451 p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~------------------------~~~~~~~~~~~i~~l~el 500 (500)
|++|+||||+..||.+|+++||++|||++++. .......+|++|+|+.||
T Consensus 164 p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i~~l~el 237 (245)
T d1qq5a_ 164 PAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDL 237 (245)
T ss_dssp GGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGH
T ss_pred hhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEECCHHHH
Confidence 99999999999999999999999999987531 112233459999999885
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.89 E-value=3.9e-23 Score=186.96 Aligned_cols=174 Identities=14% Similarity=0.139 Sum_probs=124.1
Q ss_pred CCceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCChh
Q 010820 282 LFPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKE 359 (500)
Q Consensus 282 ~~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (500)
|++|+|+||+||||+ |+...+ +++.+....+..... +.++...+......+..... . ...
T Consensus 1 M~~k~viFD~DGTL~------dt~~~~~~~~~~~~~~~g~~~~~-------~~~~~~~~~~~~~~~~~~~~-~----~~~ 62 (187)
T d2fi1a1 1 MKYHDYIWDLGGTLL------DNYETSTAAFVETLALYGITQDH-------DSVYQALKVSTPFAIETFAP-N----LEN 62 (187)
T ss_dssp CCCSEEEECTBTTTB------CHHHHHHHHHHHHHHHTTCCCCH-------HHHHHHHHHCHHHHHHHHCT-T----CTT
T ss_pred CCCCEEEEeCCCCcc------cCHHHHHHHHHHHHHHcCCCccH-------HHHHhhhhccchhhhhhhhH-H----HHH
Confidence 689999999999999 554433 555555555554322 12222222222222222111 1 111
Q ss_pred hHHHHHHhhcccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHH
Q 010820 360 EGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETP 437 (500)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~ 437 (500)
....+.+.+.+......++||+.++|+.|+++|++++|+||+...... .++++ ++.++|+.++ +.....||+|+
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~~-~l~~~---~l~~~fd~i~~~~~~~~~KP~p~ 138 (187)
T d2fi1a1 63 FLEKYKENEARELEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLE-ILEKT---SIAAYFTEVVTSSSGFKRKPNPE 138 (187)
T ss_dssp HHHHHHHHHHHHTTSCCBCTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHT---TCGGGEEEEECGGGCCCCTTSCH
T ss_pred HHHHHHHHHHHHhhcCcccchhHHHHHHHHhhhccccccccCccchhh-hhhhh---ccccccccccccccccccCCCHH
Confidence 123344444444556789999999999999999999999998876654 68888 6677888777 44567899999
Q ss_pred HHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 438 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 438 ~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
+|..++++++++ +|+||||+..|+++|+++|+++++++++
T Consensus 139 ~~~~~~~~~~~~---~~l~vgDs~~Di~aA~~aG~~~i~v~~~ 178 (187)
T d2fi1a1 139 SMLYLREKYQIS---SGLVIGDRPIDIEAGQAAGLDTHLFTSI 178 (187)
T ss_dssp HHHHHHHHTTCS---SEEEEESSHHHHHHHHHTTCEEEECSCH
T ss_pred HHHHHHHHcCCC---CeEEEeCCHHHHHHHHHcCCEEEEECCC
Confidence 999999999876 5999999999999999999999999864
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.89 E-value=2.5e-23 Score=196.31 Aligned_cols=122 Identities=20% Similarity=0.319 Sum_probs=103.5
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
...++||+.++|+.|+ +|++++|+||++...+...++.+ ++..+|+.++ +.....||+|++|+.++++++++ |
T Consensus 107 ~~~~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~l~~~---gl~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~-~ 181 (247)
T d2gfha1 107 HMILADDVKAMLTELR-KEVRLLLLTNGDRQTQREKIEAC---ACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQ-P 181 (247)
T ss_dssp TCCCCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHHHHHH---TCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCC-G
T ss_pred cCccCccHHHHHHHhh-cccceEEeecccchhhhhhhhhc---cccccccccccccccccchhhhhhHHHHHHHhhcC-H
Confidence 3578999999999998 48999999999999999999999 6778888777 44677899999999999999998 9
Q ss_pred CcEEEEeCCH-hhHHHHHHcCCcE-EEEcCCCCCCCCCC-CCceeeCCccCC
Q 010820 452 SEILFVTDVY-QEATAAKAAGLEV-VISIRPGNGPLPEN-HGFKTINSFAEI 500 (500)
Q Consensus 452 ~~~l~VGDs~-~Di~aA~~aG~~~-i~v~~~~~~~~~~~-~~~~~i~~l~el 500 (500)
++|+||||+. +|+.+|+++||++ +++++.+..+.... .++++|+++.||
T Consensus 182 ~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~l~eL 233 (247)
T d2gfha1 182 GDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLEL 233 (247)
T ss_dssp GGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGH
T ss_pred HhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEECCHHHH
Confidence 9999999997 8999999999986 45655544433333 349999999875
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=99.89 E-value=2.4e-23 Score=193.06 Aligned_cols=102 Identities=19% Similarity=0.279 Sum_probs=90.8
Q ss_pred cccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCC
Q 010820 373 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDK 450 (500)
Q Consensus 373 ~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~ 450 (500)
...+++||+.++|+.|++.|++++++||+.. ....++.+ ++.++|+..+ +....+||+|++|+.++++++++
T Consensus 88 ~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~---~l~~~f~~i~~~~~~~~~KP~~~~~~~~l~~~~i~- 161 (221)
T d1o08a_ 88 SPADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERM---NLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVA- 161 (221)
T ss_dssp CGGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHT---TCGGGCSEECCTTTSSSCTTSTHHHHHHHHHTTCC-
T ss_pred ccccccCCceeccccccccccceEEEeecch--hhHHHHhh---ccccccccccccccccccccChHHHHHHHHHcCCC-
Confidence 3467999999999999999999999999754 56777888 6677787766 44677899999999999999998
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 451 PSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 451 p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
|++|+||||+..|+++|+++||++|+|.++
T Consensus 162 ~~~~l~VgD~~~di~~A~~aG~~~i~v~~~ 191 (221)
T d1o08a_ 162 PSESIGLEDSQAGIQAIKDSGALPIGVGRP 191 (221)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEEESCH
T ss_pred CceEEEEecCHHHHHHHHHcCCEEEEECCh
Confidence 999999999999999999999999999886
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.88 E-value=3.5e-23 Score=192.11 Aligned_cols=199 Identities=14% Similarity=0.115 Sum_probs=133.1
Q ss_pred CceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCChhh
Q 010820 283 FPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEE 360 (500)
Q Consensus 283 ~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (500)
.+|+||||+||||+ |+.... +++.+...++..+... +......+................+.....
T Consensus 1 ~~kaviFD~DGtL~------dt~~~~~~a~~~~~~~~g~~~~~~------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 68 (222)
T d2fdra1 1 GFDLIIFDCDGVLV------DSEIIAAQVESRLLTEAGYPISVE------EMGERFAGMTWKNILLQVESEASIPLSASL 68 (222)
T ss_dssp CCSEEEECSBTTTB------CCHHHHHHHHHHHHHHTTCCCCHH------HHHHHHTTCCHHHHHHHHHHHHCCCCCTHH
T ss_pred CceEEEECCCCccc------CCHHHHHHHHHHHHHHcCCCCCHH------HHHHHHhhhccccccccccccccccccccc
Confidence 37999999999999 543322 5566666666553321 111222222222222221111111111111
Q ss_pred HHHHHHhhcc-cCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc---cc--cccCCC
Q 010820 361 GHIWRTGFES-NELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF---DT--AVGNKR 434 (500)
Q Consensus 361 ~~~~~~~~~~-~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~---d~--~~~~KP 434 (500)
...+...+.. ......++||+.++|++|+. +.+|+||+....+...++++ ++..+|+..+ +. ....||
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~~~~KP 142 (222)
T d2fdra1 69 LDKSEKLLDMRLERDVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKV---GLKPYFAPHIYSAKDLGADRVKP 142 (222)
T ss_dssp HHHHHHHHHHHHHHHCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHT---TCGGGTTTCEEEHHHHCTTCCTT
T ss_pred hhHHHHHHHHHhhhccchhhhHHHHhhhccc---cceeeeecchhhhhhhhccc---ccccccceeeccccccccccccc
Confidence 2222333222 23346799999999998865 56899999999999999999 6778877654 21 356799
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCC-----CC-CCceeeCCccCC
Q 010820 435 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLP-----EN-HGFKTINSFAEI 500 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~-----~~-~~~~~i~~l~el 500 (500)
+|++|.+++++++++ |++|+||||+..|+.+|+++||.+|++.++...... .. .++++|+|+.||
T Consensus 143 ~~~~~~~~~~~l~~~-p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL 213 (222)
T d2fdra1 143 KPDIFLHGAAQFGVS-PDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDL 213 (222)
T ss_dssp SSHHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGH
T ss_pred CHHHHHHHHHhhCCC-CceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHHH
Confidence 999999999999998 999999999999999999999999999987432221 11 248999999875
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.88 E-value=1.9e-23 Score=194.93 Aligned_cols=123 Identities=14% Similarity=0.122 Sum_probs=104.4
Q ss_pred ccccCCCHHHHHHHHHhCC-cEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHc---C
Q 010820 374 EGEVFDDVPEALEKWHSLG-TKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSL---G 447 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G-~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l---~ 447 (500)
...++||+.++|+.|+++| ++++|+||+....+...++.+ ++.++|+.+. +.....||+|.++...+..+ +
T Consensus 89 ~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~---gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~ 165 (228)
T d2hcfa1 89 DITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLP---GIDHYFPFGAFADDALDRNELPHIALERARRMTGAN 165 (228)
T ss_dssp GEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTT---TCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCC
T ss_pred CceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhh---cccccccccccccccccccchhHHHHHHhhhhcccC
Confidence 3579999999999999987 899999999999999999999 6788888766 44667799999887776666 7
Q ss_pred CCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCC-CCCCCC-CCceeeCCccCC
Q 010820 448 VDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGN-GPLPEN-HGFKTINSFAEI 500 (500)
Q Consensus 448 v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~-~~~~~~-~~~~~i~~l~el 500 (500)
++ |++|+||||+.+|+.+|+++||.+|+|.++.. ...+.. .++++++|++||
T Consensus 166 ~~-p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~~~~el 219 (228)
T d2hcfa1 166 YS-PSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAET 219 (228)
T ss_dssp CC-GGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCH
T ss_pred CC-hhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEECCHHHH
Confidence 87 99999999999999999999999999998743 332333 349999999885
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.83 E-value=1.6e-21 Score=180.44 Aligned_cols=104 Identities=14% Similarity=0.138 Sum_probs=89.3
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcH----HHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSR----LAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLG 447 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~----~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~ 447 (500)
...++|++.++|+.|+++|++++++||+.. ......+... ++.++|+.++ +.....||+|++|+.++++++
T Consensus 95 ~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~---~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~ 171 (222)
T d1cr6a1 95 ARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMC---ELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLK 171 (222)
T ss_dssp TCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHH---HHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHT
T ss_pred cCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhc---ChHhhhceeeehhhccCCCCChHHHHHHHHHhC
Confidence 357899999999999999999999998543 3444445555 6788888877 345678999999999999999
Q ss_pred CCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCC
Q 010820 448 VDKPSEILFVTDVYQEATAAKAAGLEVVISIRPG 481 (500)
Q Consensus 448 v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~ 481 (500)
++ |++|+||||+..|+++|+++||++|+|.++.
T Consensus 172 v~-p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~ 204 (222)
T d1cr6a1 172 AK-PNEVVFLDDFGSNLKPARDMGMVTILVHNTA 204 (222)
T ss_dssp SC-TTSEEEEESSSTTTHHHHHHTCEEEECCSSS
T ss_pred CC-cceEEEEECCHHHHHHHHHcCCEEEEECCcc
Confidence 98 9999999999999999999999999998764
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.83 E-value=1.2e-20 Score=166.87 Aligned_cols=102 Identities=20% Similarity=0.253 Sum_probs=86.2
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcH-HHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSR-LAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~-~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
...+|||+.++|+.|+++|++++|+||+.. ......++.+ ++..+|... ....||+|+.|..++++++++ |+
T Consensus 44 ~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~---~~~~~~~~~---~~~~kp~~~~~~~~~~~~~~~-~~ 116 (164)
T d1u7pa_ 44 NIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELF---DLGKYFIQR---EIYPGSKVTHFERLHHKTGVP-FS 116 (164)
T ss_dssp EECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHT---TCGGGCSEE---EESSSCHHHHHHHHHHHHCCC-GG
T ss_pred ccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcc---cccccceee---ecccCCChHHHHHHHHHhCCC-hH
Confidence 457999999999999999999999998765 4556667666 444444332 345799999999999999998 99
Q ss_pred cEEEEeCCHhhHHHHHHcCCcEEEEcCCCC
Q 010820 453 EILFVTDVYQEATAAKAAGLEVVISIRPGN 482 (500)
Q Consensus 453 ~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~ 482 (500)
+|+||||+..|+++|+++|+.+|+|.++.+
T Consensus 117 ~~l~igD~~~di~aA~~aG~~~i~v~~G~~ 146 (164)
T d1u7pa_ 117 QMVFFDDENRNIIDVGRLGVTCIHIRDGMS 146 (164)
T ss_dssp GEEEEESCHHHHHHHHTTTCEEEECSSCCC
T ss_pred HEEEEcCCHHHHHHHHHcCCEEEEECCCCC
Confidence 999999999999999999999999988743
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=1.8e-21 Score=179.48 Aligned_cols=103 Identities=16% Similarity=0.136 Sum_probs=86.4
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHH----HHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQR----LIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLG 447 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~----~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~ 447 (500)
...++|++.++|..|+++|++++++||+...... ...... ++.++|+.++ +....+||+|++|++++++++
T Consensus 97 ~~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~---~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~ 173 (225)
T d1zd3a1 97 ARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMC---ELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLK 173 (225)
T ss_dssp HCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHH---HHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHT
T ss_pred cCCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhc---ChHhhccEEEeccccccchhHHHHHHHHhhhcc
Confidence 3468999999999999999999999997644332 222223 4567787777 346778999999999999999
Q ss_pred CCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 448 VDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 448 v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
++ |++|+||||+..|+++|+++||++|+++++
T Consensus 174 ~~-p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~ 205 (225)
T d1zd3a1 174 AS-PSEVVFLDDIGANLKPARDLGMVTILVQDT 205 (225)
T ss_dssp CC-GGGEEEEESCHHHHHHHHHTTCEEEECSSH
T ss_pred cC-ccceeEEecCHHHHHHHHHcCCEEEEECCc
Confidence 98 999999999999999999999999999875
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=99.78 E-value=7.2e-20 Score=160.64 Aligned_cols=104 Identities=13% Similarity=0.088 Sum_probs=77.8
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCc---------------HHHHHHHHhccCcccccc-cccccc--cccccCCCCH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGS---------------RLAQRLIFGNSNYGDLRK-YLSGFF--DTAVGNKRET 436 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~---------------~~~~~~~l~~~~~~~l~~-~f~~~~--d~~~~~KP~p 436 (500)
..++||+.++|+.|+++|++++|+||.+ .......+...+.. +.. +|+... +....+||+|
T Consensus 29 ~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~i~~~~~~~~~~~~~~KP~p 107 (161)
T d2fpwa1 29 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ-FDEVLICPHLPADECDCRKPKV 107 (161)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCC-EEEEEEECCCGGGCCSSSTTSS
T ss_pred ceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccc-cceeeecccccccccccccccc
Confidence 3589999999999999999999999964 12233444444321 112 233333 3345679999
Q ss_pred HHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 437 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 437 ~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
.+|.+++++++++ |++|+||||+..|+++|+++||+++++++.
T Consensus 108 ~~~~~~~~~~~id-~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~ 150 (161)
T d2fpwa1 108 KLVERYLAEQAMD-RANSYVIGDRATDIQLAENMGINGLRYDRE 150 (161)
T ss_dssp GGGGGGC----CC-GGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred HHHHHHHHhcCCC-hhcEEEECCCHHHHHHHHHcCCeEEEECCC
Confidence 9999999999998 999999999999999999999999999865
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=99.78 E-value=2.4e-20 Score=167.83 Aligned_cols=104 Identities=17% Similarity=0.253 Sum_probs=91.7
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
..+++++.+++..++.+|++++++||+........+.... ++..+|+.++ +..+..||+|++|+.++++++++ |+
T Consensus 83 ~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~--~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~-~~ 159 (197)
T d2b0ca1 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYP--EIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFS-PS 159 (197)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCH--HHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCC-GG
T ss_pred cccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcc--cchhhccceeecccccccccchHHHHHHHHhcCCC-CC
Confidence 4688999999999999999999999998877776666652 5677788777 44677899999999999999998 99
Q ss_pred cEEEEeCCHhhHHHHHHcCCcEEEEcCCC
Q 010820 453 EILFVTDVYQEATAAKAAGLEVVISIRPG 481 (500)
Q Consensus 453 ~~l~VGDs~~Di~aA~~aG~~~i~v~~~~ 481 (500)
+|+||||+.+|+++|+++||++|+|+++.
T Consensus 160 ~~l~vgDs~~di~~A~~aG~~ti~v~~~~ 188 (197)
T d2b0ca1 160 DTVFFDDNADNIEGANQLGITSILVKDKT 188 (197)
T ss_dssp GEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred eEEEEeCCHHHHHHHHHcCCEEEEECCCC
Confidence 99999999999999999999999998764
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=99.76 E-value=5.6e-19 Score=158.62 Aligned_cols=124 Identities=18% Similarity=0.171 Sum_probs=88.1
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHH---------------HHHHHHhccCcccccccccccc---------ccccc
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRL---------------AQRLIFGNSNYGDLRKYLSGFF---------DTAVG 431 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~---------------~~~~~l~~~~~~~l~~~f~~~~---------d~~~~ 431 (500)
+++||+.++|+.|+++|++++++||.+.. .....+...+......+++... +....
T Consensus 27 ~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cp~~p~~~~~~~~~~~~~ 106 (182)
T d2gmwa1 27 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVCDC 106 (182)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCBTTCSSGGGBSCCSS
T ss_pred eECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccccceeecccccccccccccccccc
Confidence 48999999999999999999999997631 1222222222111111111110 22345
Q ss_pred CCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcE-EEEcCCCCCCCC-CCCCceeeCCccCC
Q 010820 432 NKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV-VISIRPGNGPLP-ENHGFKTINSFAEI 500 (500)
Q Consensus 432 ~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~-i~v~~~~~~~~~-~~~~~~~i~~l~el 500 (500)
+||+|.++..++++++++ |++++||||+.+|+++|+++|+.+ +++.++...... ...++++++++.||
T Consensus 107 rKP~p~m~~~~~~~~~i~-~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl 176 (182)
T d2gmwa1 107 RKPHPGMLLSARDYLHID-MAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADL 176 (182)
T ss_dssp STTSCHHHHHHHHHHTBC-GGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGH
T ss_pred cCCccccccchhhhcccc-cccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHH
Confidence 799999999999999998 999999999999999999999987 556555332222 22359999999874
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=99.71 E-value=1.1e-17 Score=152.96 Aligned_cols=104 Identities=17% Similarity=0.115 Sum_probs=78.2
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcH---------------HHHHHHHhccCcccccccccccc-c---------ccc
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSR---------------LAQRLIFGNSNYGDLRKYLSGFF-D---------TAV 430 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~---------------~~~~~~l~~~~~~~l~~~f~~~~-d---------~~~ 430 (500)
.++||+.++|+.|+++|++++|+||.+- ..+...++..|. .+..++.+.+ . ...
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~ 126 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGV-FVDMVLACAYHEAGVGPLAIPDHP 126 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTC-CCSEEEEECCCTTCCSTTCCSSCT
T ss_pred EecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhccc-ccceEEEecccccccccccccccc
Confidence 4899999999999999999999999541 122233333321 1111111111 1 122
Q ss_pred cCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCC
Q 010820 431 GNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPG 481 (500)
Q Consensus 431 ~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~ 481 (500)
.+||+|.++.+++++++++ +++|+||||+.+|+++|+++||.++++.++.
T Consensus 127 ~rKP~p~ml~~a~~~~~i~-~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~ 176 (209)
T d2o2xa1 127 MRKPNPGMLVEAGKRLALD-LQRSLIVGDKLADMQAGKRAGLAQGWLVDGE 176 (209)
T ss_dssp TSTTSCHHHHHHHHHHTCC-GGGCEEEESSHHHHHHHHHTTCSEEEEETCC
T ss_pred cccccchhhhHhHHHhCCC-ccceEEeCCCHHHHHHHHHCCCcEEEEeCCC
Confidence 3599999999999999998 9999999999999999999999999998764
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.68 E-value=2.3e-17 Score=155.61 Aligned_cols=70 Identities=20% Similarity=0.094 Sum_probs=59.7
Q ss_pred ccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCH-hhHHHHHHcCCcEEEEcCCC-CCCCCCC---CCceeeCCccCC
Q 010820 430 VGNKRETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAAGLEVVISIRPG-NGPLPEN---HGFKTINSFAEI 500 (500)
Q Consensus 430 ~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~-~~~~~~~---~~~~~i~~l~el 500 (500)
...||+|++|+.++++++++ |++|+||||++ +||.+|+++||++|+|.+|. ....++. .+|++++|+.||
T Consensus 173 ~~~KP~p~~~~~a~~~lgi~-p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~sl~eL 247 (250)
T d2c4na1 173 YVGKPSPWIIRAALNKMQAH-SEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEI 247 (250)
T ss_dssp ECSTTSTHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGC
T ss_pred hcccchhhhHhhhhhhhcCC-chheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEECCHHHh
Confidence 34699999999999999998 99999999997 69999999999999998873 3333333 239999999986
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=99.64 E-value=9.5e-17 Score=151.61 Aligned_cols=118 Identities=16% Similarity=0.043 Sum_probs=76.9
Q ss_pred HHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCCcEEEEeC
Q 010820 382 PEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSEILFVTD 459 (500)
Q Consensus 382 ~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGD 459 (500)
...+..+..++....|+||.............+.+.+..++.... +....+||+|.+|+.++++++++ |++|+||||
T Consensus 127 ~~~~~~~~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gKP~p~~~~~al~~l~i~-~~~~~mIGD 205 (253)
T d1wvia_ 127 KLTLATLAIQKGAVFIGTNPDLNIPTERGLLPGAGAILFLLEKATRVKPIIIGKPEAVIMNKALDRLGVK-RHEAIMVGD 205 (253)
T ss_dssp HHHHHHHHHHTTCEEEESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHHHTSC-GGGEEEEES
T ss_pred HHHHHhhhhhhccccccCCCCceeEcCCcccccCCcchhcccccccceeEEeccCCcccceehhhhcccc-ccceEEEcC
Confidence 344444455566788999975422221100110000111111111 11234599999999999999998 999999999
Q ss_pred CH-hhHHHHHHcCCcEEEEcCCC-CCCCCCC---CCceeeCCccCC
Q 010820 460 VY-QEATAAKAAGLEVVISIRPG-NGPLPEN---HGFKTINSFAEI 500 (500)
Q Consensus 460 s~-~Di~aA~~aG~~~i~v~~~~-~~~~~~~---~~~~~i~~l~el 500 (500)
+. +||.+|+++||++|+|.+|. ....... .+|++|+||.||
T Consensus 206 s~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~ 251 (253)
T d1wvia_ 206 NYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEW 251 (253)
T ss_dssp CTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGC
T ss_pred ChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHc
Confidence 97 59999999999999999873 3332222 249999999986
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.59 E-value=1.6e-15 Score=139.98 Aligned_cols=96 Identities=13% Similarity=0.099 Sum_probs=80.6
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccc---cc------------cccccCCCCHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSG---FF------------DTAVGNKRETPSY 439 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~---~~------------d~~~~~KP~p~~~ 439 (500)
.+++||+.++|+.|+++|++++++||+....++.++++++ +..+|.+ .+ ......+|++...
T Consensus 74 ~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~---~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 150 (226)
T d2feaa1 74 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIV---EKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCK 150 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTS---CGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCH
T ss_pred cchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcC---CccceeeeeEEEeCCcceeccccccccccccCCHHHH
Confidence 4689999999999999999999999999999999999984 4444421 11 1123357788899
Q ss_pred HHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcE
Q 010820 440 VEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV 474 (500)
Q Consensus 440 ~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~ 474 (500)
..++++++++ +++|+||||+.+|+.+|+++|+.+
T Consensus 151 ~~~~~~~~~~-~~~~i~iGDs~~Dl~~a~~A~~~~ 184 (226)
T d2feaa1 151 PSVIHELSEP-NQYIIMIGDSVTDVEAAKLSDLCF 184 (226)
T ss_dssp HHHHHHHCCT-TCEEEEEECCGGGHHHHHTCSEEE
T ss_pred HHHHHHhcCC-CceEEEEeCchhhHHHHHHCCEEE
Confidence 9999999998 999999999999999999999744
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.57 E-value=1.3e-15 Score=143.61 Aligned_cols=71 Identities=14% Similarity=0.180 Sum_probs=59.8
Q ss_pred cccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCH-hhHHHHHHcCCcEEEEcCCCC-CCCCCC---CCceeeCCccCC
Q 010820 429 AVGNKRETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAAGLEVVISIRPGN-GPLPEN---HGFKTINSFAEI 500 (500)
Q Consensus 429 ~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~-~~~~~~---~~~~~i~~l~el 500 (500)
...+||+|.+|+++++++|++ |++|+||||+. +||++|+++||++++|.+|.. ...... .+|++|+|+.|+
T Consensus 176 ~~~~KP~~~~~~~~~~~~gi~-~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~sl~e~ 251 (253)
T d1yv9a1 176 VYIGKPKAIIMERAIAHLGVE-KEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEW 251 (253)
T ss_dssp EECSTTSHHHHHHHHHHHCSC-GGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGC
T ss_pred eeecccchhHHHHHHHHhCCC-ccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhcCCCCCEEECCHHHc
Confidence 345799999999999999998 99999999997 699999999999999988732 222222 239999999986
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=2.9e-15 Score=137.87 Aligned_cols=121 Identities=12% Similarity=0.082 Sum_probs=82.7
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccccc--------ccccccccCCC------CHHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS--------GFFDTAVGNKR------ETPSYV 440 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~--------~~~d~~~~~KP------~p~~~~ 440 (500)
..++||+.++|+.|+++|++++|+|++....++.+++.+|+... +.+. +.+.......| +.....
T Consensus 81 ~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~-~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v~ 159 (217)
T d1nnla_ 81 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPAT-NVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIK 159 (217)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGG-GEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHH
T ss_pred cccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCccc-ceeeeeeeeeehhccccceeeeeeeccchHHHHHH
Confidence 46899999999999999999999999999999999999965321 1121 11101111122 445555
Q ss_pred HHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 441 EITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 441 ~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
.+.++++ +++|++|||+.+|+.+++.+|+.++ ++.....+.....++++|.||.||
T Consensus 160 ~~~~~~~---~~~~~~vGDs~~Di~~~~~ag~~va-~~~~~~~~~~~~~ad~~i~~f~el 215 (217)
T d1nnla_ 160 LLKEKFH---FKKIIMIGDGATDMEACPPADAFIG-FGGNVIRQQVKDNAKWYITDFVEL 215 (217)
T ss_dssp HHHHHHC---CSCEEEEESSHHHHTTTTTSSEEEE-ECSSCCCHHHHHHCSEEESCGGGG
T ss_pred HHHhccC---ccccEEEEeCHhhHHHHHhCCceEE-ECCCHHHHHHHHhCCCEeCCHHHh
Confidence 5555544 6799999999999999999998643 321111111112248999999886
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=99.49 E-value=4.7e-15 Score=140.29 Aligned_cols=70 Identities=17% Similarity=0.248 Sum_probs=59.3
Q ss_pred ccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCH-hhHHHHHHcCCcEEEEcCCCCCCC-C---CCCCceeeCCccCC
Q 010820 430 VGNKRETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAAGLEVVISIRPGNGPL-P---ENHGFKTINSFAEI 500 (500)
Q Consensus 430 ~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~-~---~~~~~~~i~~l~el 500 (500)
...||+|.+|..++++++++ |++|+||||+. +||.+|+++||++|||.+|..... . ...+||+++|+.||
T Consensus 182 ~~~KP~p~~~~~a~~~l~~~-~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL 256 (261)
T d1vjra_ 182 IAGKPNPLVVDVISEKFGVP-KERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGEL 256 (261)
T ss_dssp ECSTTSTHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHH
T ss_pred ccCCCcHHHHHHHHhhhccC-chhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHH
Confidence 45799999999999999998 99999999996 799999999999999988744322 1 22349999999875
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.45 E-value=1.3e-13 Score=124.77 Aligned_cols=114 Identities=16% Similarity=0.175 Sum_probs=88.7
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc------------cccccCCCCHHHHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF------------DTAVGNKRETPSYVEI 442 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~------------d~~~~~KP~p~~~~~~ 442 (500)
..+++++.+.++.++.+|..++++|++.........+..+ ...++...+ ......++++..+..+
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLG---LDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKI 150 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHT---CSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccc---hhhhhhhhhccccccccccccccccccccccchhhhH
Confidence 4688999999999999999999999999988888887774 333333222 1123446689999999
Q ss_pred HHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCC
Q 010820 443 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINS 496 (500)
Q Consensus 443 l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~ 496 (500)
++++++. ++++++|||+.+|+.+++.+|+..+. + + .+.....+++++++
T Consensus 151 ~~~~~~~-~~~~i~iGDs~nDi~m~~~ag~~va~-n-a--~~~lk~~Ad~vi~~ 199 (210)
T d1j97a_ 151 AKIEGIN-LEDTVAVGDGANDISMFKKAGLKIAF-C-A--KPILKEKADICIEK 199 (210)
T ss_dssp HHHHTCC-GGGEEEEESSGGGHHHHHHCSEEEEE-S-C--CHHHHTTCSEEECS
T ss_pred HHHhccc-ccceEEecCCcChHHHHHHCCCCEEE-C-C--CHHHHHhCCEEEcC
Confidence 9999998 99999999999999999999987554 3 2 22333445888874
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=99.44 E-value=5.7e-13 Score=114.40 Aligned_cols=105 Identities=12% Similarity=0.005 Sum_probs=72.1
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHH---HHHHHhccCc--cccc-ccccccc-cccccCCCCHHHHHHHHHHcC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLA---QRLIFGNSNY--GDLR-KYLSGFF-DTAVGNKRETPSYVEITNSLG 447 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~---~~~~l~~~~~--~~l~-~~f~~~~-d~~~~~KP~p~~~~~~l~~l~ 447 (500)
..++||+.++|+.|+++|++++++||.+... ....++.... ..+. ..+...+ ......+|+.......+.++.
T Consensus 35 ~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~k~~~l~~~~ 114 (149)
T d1ltqa1 35 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHI 114 (149)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHHHT
T ss_pred CccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEEEeecccccccCCchHHHHHHHHHhc
Confidence 3589999999999999999999999976321 1111211100 0000 1122222 223345677788888888887
Q ss_pred CCCCCc-EEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 448 VDKPSE-ILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 448 v~~p~~-~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
.+ +.+ ++||||+..|+++|+++|++++.|.+|
T Consensus 115 ~~-~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~G 147 (149)
T d1ltqa1 115 AP-HFDVKLAIDDRTQVVEMWRRIGVECWQVASG 147 (149)
T ss_dssp TT-TCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred cC-CCceEEEEcCCHHHHHHHHHCCCcEEEeCCC
Confidence 76 555 577899999999999999999999886
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.40 E-value=1.9e-13 Score=136.27 Aligned_cols=122 Identities=20% Similarity=0.199 Sum_probs=99.2
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc---------------cccccCCCCHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF---------------DTAVGNKRETPSY 439 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~---------------d~~~~~KP~p~~~ 439 (500)
..|+||+.++|+.|+++|++++++||.....+...++++ |+.++|+... +.....||+|++|
T Consensus 214 i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~l---gl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~ 290 (380)
T d1qyia_ 214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENL---GLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSY 290 (380)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH---TCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHH
T ss_pred ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---CCcccCCcceEEecchhhhhhhhccccccccCCChHHH
Confidence 357789999999999999999999999999999999999 5666665322 1134679999999
Q ss_pred HHHHHHc--------------CCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCC----CCC-CCceeeCCccCC
Q 010820 440 VEITNSL--------------GVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPL----PEN-HGFKTINSFAEI 500 (500)
Q Consensus 440 ~~~l~~l--------------~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~----~~~-~~~~~i~~l~el 500 (500)
..++..+ +.. |++|+||||+.+|+.+|+++|+.+|+|.+|..... ... .+|++++|+.||
T Consensus 291 ~~~~~~~~~~~~~k~~iv~~~~~~-~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el 369 (380)
T d1qyia_ 291 IAALYGNNRDKYESYINKQDNIVN-KDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGEL 369 (380)
T ss_dssp HHHHHCCCGGGHHHHHHCCTTCSC-TTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGH
T ss_pred HHHHHHcCCCHHHHHHHHHHhCCC-CCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECCHHHH
Confidence 9998665 455 88999999999999999999999999998733221 222 349999999874
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.98 E-value=1.4e-09 Score=96.52 Aligned_cols=95 Identities=14% Similarity=0.247 Sum_probs=70.3
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCc--------HHH----HHHHHhccCcccccccccccccccccCCCCHHHHHHHHH
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGS--------RLA----QRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITN 444 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~--------~~~----~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~ 444 (500)
++|++.+.|+.|.++|+.++|+||.+ .+. ...+++.++.. ..++.+ ......+||+|-|+..+++
T Consensus 51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l~~~--~~i~~~-~~~~~~RKP~~GM~~~~~~ 127 (195)
T d1yj5a1 51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVA-THAGLNRKPVSGMWDHLQE 127 (195)
T ss_dssp SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHHTSC--CEEEEE-CSSSSSSTTSTHHHHHHHH
T ss_pred ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHcCCC--ccEEEe-cCccccCCCccHHHHHHHH
Confidence 57999999999999999999999953 222 23344444211 011111 1234568999999999999
Q ss_pred HcC----CCCCCcEEEEeCC-----------------HhhHHHHHHcCCcEE
Q 010820 445 SLG----VDKPSEILFVTDV-----------------YQEATAAKAAGLEVV 475 (500)
Q Consensus 445 ~l~----v~~p~~~l~VGDs-----------------~~Di~aA~~aG~~~i 475 (500)
+++ ++ .++++||||. ..|++.|.++|+++.
T Consensus 128 ~~n~~~~id-~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF~ 178 (195)
T d1yj5a1 128 QANEGIPIS-VEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA 178 (195)
T ss_dssp TSSSSCCCC-GGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred HhcccccCC-cCceEEEeCccCccccccccccccCcchhHHHHHHHCCCccc
Confidence 985 76 8899999994 499999999999964
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.81 E-value=8.4e-09 Score=91.86 Aligned_cols=97 Identities=10% Similarity=0.030 Sum_probs=73.6
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc------cccccCCCCHHHHHHHHHHcCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF------DTAVGNKRETPSYVEITNSLGV 448 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~------d~~~~~KP~p~~~~~~l~~l~v 448 (500)
....++....+..++ .+++.+++|.+............+. ...+...+ .......+++......+++++.
T Consensus 68 ~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i 143 (206)
T d1rkua_ 68 LKPLEGAVEFVDWLR-ERFQVVILSDTFYEFSQPLMRQLGF---PTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKS 143 (206)
T ss_dssp CCCCTTHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTTC---CCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHH
T ss_pred ccccchHHHHHHHhh-cCceEEEeccCchHHHHHHHHHhCC---chhhcceeeeecccccccccccchhhHHHHHHHhcc
Confidence 457788888887765 6899999999999988888877743 22222211 1122234556667788899999
Q ss_pred CCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 010820 449 DKPSEILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 449 ~~p~~~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
+ ++++++|||+.||+.+.+.+|+..+.
T Consensus 144 ~-~~eviaiGDg~NDi~Ml~~Ag~gIAm 170 (206)
T d1rkua_ 144 L-YYRVIAAGDSYNDTTMLSEAHAGILF 170 (206)
T ss_dssp T-TCEEEEEECSSTTHHHHHHSSEEEEE
T ss_pred c-ccceEEecCCccCHHHHHhCCccEEE
Confidence 8 99999999999999999999998776
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=98.73 E-value=2.3e-08 Score=88.73 Aligned_cols=98 Identities=13% Similarity=0.137 Sum_probs=64.7
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcH---HHHHHHH-hccCcccccccccccccccccCCCCHHHHHHHHHHcCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSR---LAQRLIF-GNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVD 449 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~---~~~~~~l-~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~ 449 (500)
.+.+.||+.++|+.++++|++++.+||... +.....| +.+|+.. ...-.-.+. ..+|....-...++++++.
T Consensus 84 ~A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~-~~~~~vll~---~~~~~K~~rr~~Ik~y~I~ 159 (209)
T d2b82a1 84 FSIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA-TNMNPVIFA---GDKPGQNTKSQWLQDKNIR 159 (209)
T ss_dssp GCEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT-TTBCCCEEC---CCCTTCCCSHHHHHHTTEE
T ss_pred ccCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCc-ccccceEee---CCCCCchHHHHHHHHcCeE
Confidence 356889999999999999999999999763 2233333 3354211 111111111 1122112223344667765
Q ss_pred CCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 450 KPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 450 ~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
+|+||..+|+.+|+.+|++.|.+.+.
T Consensus 160 -----l~~GD~l~Df~aA~eagi~~iRi~r~ 185 (209)
T d2b82a1 160 -----IFYGDSDNDITAARDVGARGIRILRA 185 (209)
T ss_dssp -----EEEESSHHHHHHHHHTTCEEEECCCC
T ss_pred -----EEecCCHHHHhHHHHcCCCceEeecc
Confidence 99999999999999999999999876
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=98.67 E-value=2.3e-08 Score=90.64 Aligned_cols=90 Identities=19% Similarity=0.176 Sum_probs=58.3
Q ss_pred cHHHHHHHHhccCcccccccccccc-cccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 402 SRLAQRLIFGNSNYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 402 ~~~~~~~~l~~~~~~~l~~~f~~~~-d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
.....+..++.++. .+.......+ +......+++..+..++++++++ ++++++|||+.||+.+++.+|+.. .+..+
T Consensus 120 ~~~~~~~~~~~~~~-~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~-~~~~~~iGD~~NDi~ml~~ag~~v-av~na 196 (230)
T d1wr8a_ 120 NVETVREIINELNL-NLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIK-PKEVAHVGDGENDLDAFKVVGYKV-AVAQA 196 (230)
T ss_dssp CHHHHHHHHHHTTC-SCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSC-GGGEEEEECSGGGHHHHHHSSEEE-ECTTS
T ss_pred cHHHHHHHHHHhcc-ceEEeeCCcEEEEeeCCcCcchhhcccccccccc-hhheeeeecCccHHHHHHHCCeEE-EECCC
Confidence 34455555655531 1111111112 44455678999999999999998 999999999999999999999743 33222
Q ss_pred CCCCCCCCCCceeeCC
Q 010820 481 GNGPLPENHGFKTINS 496 (500)
Q Consensus 481 ~~~~~~~~~~~~~i~~ 496 (500)
.+.....+++++++
T Consensus 197 --~~~~k~~A~~v~~~ 210 (230)
T d1wr8a_ 197 --PKILKENADYVTKK 210 (230)
T ss_dssp --CHHHHTTCSEECSS
T ss_pred --CHHHHHhCCEEECC
Confidence 22333334666654
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.56 E-value=4.6e-08 Score=88.96 Aligned_cols=41 Identities=10% Similarity=0.113 Sum_probs=36.6
Q ss_pred CCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 010820 434 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 475 (500)
Q Consensus 434 P~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i 475 (500)
.+....+.++++++++ ++++++|||+.||+.+.+.+|...+
T Consensus 151 ~K~~ai~~l~~~~~i~-~~~v~~~GDs~nD~~m~~~a~~~va 191 (225)
T d1l6ra_ 151 DKAFAVNKLKEMYSLE-YDEILVIGDSNNDMPMFQLPVRKAC 191 (225)
T ss_dssp SHHHHHHHHHHHTTCC-GGGEEEECCSGGGHHHHTSSSEEEE
T ss_pred chHHHHHHHhhhhccc-hhheeeecCCcchHHHHHHCCeEEE
Confidence 3677889999999998 9999999999999999999996443
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.41 E-value=7.1e-08 Score=84.23 Aligned_cols=84 Identities=12% Similarity=0.223 Sum_probs=68.3
Q ss_pred HHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhh
Q 010820 384 ALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQE 463 (500)
Q Consensus 384 ~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~D 463 (500)
.+..|++.|+.++++|...........+.++ +...+ ...+++...+..++++++++ +++|+||||..+|
T Consensus 40 gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~---~~~~~-------~~~~~K~~~l~~~~~~~~i~-~~~v~~vGDd~nD 108 (177)
T d1k1ea_ 40 GIKMLMDADIQVAVLSGRDSPILRRRIADLG---IKLFF-------LGKLEKETACFDLMKQAGVT-AEQTAYIGDDSVD 108 (177)
T ss_dssp HHHHHHHTTCEEEEEESCCCHHHHHHHHHHT---CCEEE-------ESCSCHHHHHHHHHHHHTCC-GGGEEEEECSGGG
T ss_pred HHHHHhhhcEEEEEecCCchhHHHHHHhhhc---ccccc-------cccccHHHHHHHHHHHhcCC-cceeEEecCCccH
Confidence 6888899999999999988888888776663 22221 23467788899999999998 9999999999999
Q ss_pred HHHHHHcCCcEEEEc
Q 010820 464 ATAAKAAGLEVVISI 478 (500)
Q Consensus 464 i~aA~~aG~~~i~v~ 478 (500)
+.+.+.+|+..+..+
T Consensus 109 l~~l~~~g~siap~n 123 (177)
T d1k1ea_ 109 LPAFAACGTSFAVAD 123 (177)
T ss_dssp HHHHHHSSEEEECTT
T ss_pred HHHHhhCCeEEEcCC
Confidence 999999998655443
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.38 E-value=7.5e-07 Score=83.39 Aligned_cols=40 Identities=20% Similarity=0.253 Sum_probs=36.3
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 010820 435 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 475 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i 475 (500)
|...++.++++++++ ++++++|||+.||+.+.+.+|...+
T Consensus 214 K~~ai~~l~~~~gi~-~~~vi~~GD~~ND~~Ml~~a~~sva 253 (285)
T d1nrwa_ 214 KGQALKRLAKQLNIP-LEETAAVGDSLNDKSMLEAAGKGVA 253 (285)
T ss_dssp HHHHHHHHHHHTTCC-GGGEEEEESSGGGHHHHHHSSEEEE
T ss_pred hhhHHHHHHhhcccC-cccEEEEeCCHHHHHHHHhCCeEEE
Confidence 677889999999998 9999999999999999999996553
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.30 E-value=7.6e-07 Score=82.75 Aligned_cols=41 Identities=22% Similarity=0.428 Sum_probs=36.2
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 010820 435 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
|....+.++++++++ ++++++|||+.||+.+.+.+|...+.
T Consensus 198 K~~al~~l~~~~~i~-~~~ii~~GD~~ND~~ml~~~~~~~am 238 (271)
T d1rkqa_ 198 KGTGVKSLADVLGIK-PEEIMAIGDQENDIAMIEYAGVGVAV 238 (271)
T ss_dssp HHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred cccccceehhhcccc-hhcEEEEeCcHhHHHHHHhCCcEEEe
Confidence 557889999999998 99999999999999999999965533
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.24 E-value=6.7e-07 Score=79.29 Aligned_cols=110 Identities=22% Similarity=0.203 Sum_probs=68.8
Q ss_pred CcccccCCCHHHHHHHHHhCC-cEEEEEcCCcHH---HHHHHHhccCcccccccccccc-cccccCCCCHHHHHHHHHHc
Q 010820 372 ELEGEVFDDVPEALEKWHSLG-TKVYIYSSGSRL---AQRLIFGNSNYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSL 446 (500)
Q Consensus 372 ~~~~~~~pgv~~~L~~L~~~G-~~l~v~Tn~~~~---~~~~~l~~~~~~~l~~~f~~~~-d~~~~~KP~p~~~~~~l~~l 446 (500)
....+++||+.++|+.|++.| +.+.++|..... ......+.+ ..+|...+ +.....+.+ .
T Consensus 70 f~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl-----~~~~~~~~~~~~~~t~~K----------~ 134 (195)
T d1q92a_ 70 FFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWV-----EKYFGPDFLEQIVLTRDK----------T 134 (195)
T ss_dssp TTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHH-----HHHHCGGGGGGEEECSCS----------T
T ss_pred HhhCCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHH-----HHhcCCCCccEEEEcccc----------c
Confidence 345689999999999999865 568888886532 122222222 22222222 111112222 1
Q ss_pred CCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccC
Q 010820 447 GVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE 499 (500)
Q Consensus 447 ~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e 499 (500)
.+. . -++|+|++..+.+..++|+.+|.++.++++........+.+.+..|
T Consensus 135 ~~~-~--d~lIDD~p~n~~~~~~~g~~~il~~~~~N~~~~~~~~~~Rv~~W~e 184 (195)
T d1q92a_ 135 VVS-A--DLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWAD 184 (195)
T ss_dssp TSC-C--SEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTS
T ss_pred eec-C--eEEecCcHHHHHHHhcCCCeEEEECCCcccCCCCCCCceeeCCHHH
Confidence 232 2 2899999999999999999999999988765433333566777665
|
| >d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5' nucleotidase-like domain: Cytosolic IMP-GMP specific 5'-nucleotidase species: Legionella pneumophila [TaxId: 446]
Probab=98.19 E-value=2.9e-06 Score=83.56 Aligned_cols=102 Identities=18% Similarity=0.249 Sum_probs=76.1
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccC------cccccccccccccccccCCC---------------
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN------YGDLRKYLSGFFDTAVGNKR--------------- 434 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~------~~~l~~~f~~~~d~~~~~KP--------------- 434 (500)
..-|.+...|++||++|-++.++||+...++...+..+- ..+|.++||-++ +...||
T Consensus 185 ~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVI--v~A~KP~FF~~~~~~~~v~~~ 262 (458)
T d2bdea1 185 IREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVI--TLANKPRFFYDNLRFLSVNPE 262 (458)
T ss_dssp ECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEE--ESCCHHHHHHSCCCEEEECTT
T ss_pred cCChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEE--eCCCCCCccCCCCcceEEeCC
Confidence 345779999999999999999999999999888877653 336666776655 111222
Q ss_pred -----------C-----HHHHHHHHHHcCCCCCCcEEEEeCCH-hhHHHHH-HcCCcEEEEcCC
Q 010820 435 -----------E-----TPSYVEITNSLGVDKPSEILFVTDVY-QEATAAK-AAGLEVVISIRP 480 (500)
Q Consensus 435 -----------~-----p~~~~~~l~~l~v~~p~~~l~VGDs~-~Di~aA~-~aG~~~i~v~~~ 480 (500)
+ --......+.+|.. ..+++||||+. .||..++ ..||.|+.|...
T Consensus 263 ~g~l~~~~~~~~~~vY~gGn~~~l~~llg~~-g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E 325 (458)
T d2bdea1 263 NGTMTNVHGPIVPGVYQGGNAKKFTEDLGVG-GDEILYIGDHIYGDILRLKKDCNWRTALVVEE 325 (458)
T ss_dssp TCCEEECCSCCCSEEEEECCHHHHHHHTTCC-GGGEEEEESSCCSCHHHHHHHHCSEEEEECTT
T ss_pred CCccccCCccccCCccccCCHHHHHHHhCCC-CCcEEEECCccchhhhhhhhhcCCceEEehHH
Confidence 0 01234556677887 88999999998 8988776 589999999764
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.11 E-value=2.8e-06 Score=78.73 Aligned_cols=42 Identities=12% Similarity=0.222 Sum_probs=38.1
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEE
Q 010820 435 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v 477 (500)
|...+..++++++++ ++++++|||+.||+.+.+.+|..++.-
T Consensus 191 K~~al~~l~~~lgi~-~~~vi~~GD~~ND~~Ml~~ag~~vam~ 232 (269)
T d1rlma_ 191 KANGISRLLKRWDLS-PQNVVAIGDSGNDAEMLKMARYSFAMG 232 (269)
T ss_dssp HHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHCSEEEECT
T ss_pred HHHHHHHHhhhhccc-cccEEEEcCCcchHHHHHhCCeEEEeC
Confidence 777999999999998 999999999999999999999876643
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.10 E-value=3.8e-06 Score=77.52 Aligned_cols=44 Identities=16% Similarity=0.154 Sum_probs=38.4
Q ss_pred CCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEc
Q 010820 433 KRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISI 478 (500)
Q Consensus 433 KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~ 478 (500)
-.|...++.++++++++ ++++++|||+.||+.+.+.+|.. +.+.
T Consensus 185 ~sK~~al~~l~~~~~i~-~~~~~a~GD~~ND~~Ml~~a~~s-vav~ 228 (260)
T d2rbka1 185 DTKQKGIDEIIRHFGIK-LEETMSFGDGGNDISMLRHAAIG-VAMG 228 (260)
T ss_dssp CSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSEE-EECT
T ss_pred CCHHHHHHHHHHhcccc-HhheeEecCCcccHHHHHhCCeE-EEeC
Confidence 34778899999999998 99999999999999999999985 4443
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.10 E-value=3.8e-06 Score=78.77 Aligned_cols=97 Identities=14% Similarity=0.141 Sum_probs=64.1
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccc-cccccccc---cc---cccCCC------CHHHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDL-RKYLSGFF---DT---AVGNKR------ETPSYVE 441 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l-~~~f~~~~---d~---~~~~KP------~p~~~~~ 441 (500)
..+.||+.++++.|+++|++++|+|+|....++.+++++++..- ...+.-.+ +. .....| +.....+
T Consensus 134 i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~~~ 213 (291)
T d2bdua1 134 VMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGALK 213 (291)
T ss_dssp CCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHHT
T ss_pred CCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchhhh
Confidence 56899999999999999999999999999999999999864210 01121111 11 111112 2233333
Q ss_pred HHHHcCCC-CCCcEEEEeCCHhhHHHHHHcC
Q 010820 442 ITNSLGVD-KPSEILFVTDVYQEATAAKAAG 471 (500)
Q Consensus 442 ~l~~l~v~-~p~~~l~VGDs~~Di~aA~~aG 471 (500)
....+... +..++++|||+.+|+.+|..+.
T Consensus 214 ~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~ 244 (291)
T d2bdua1 214 NTDYFSQLKDNSNIILLGDSQGDLRMADGVA 244 (291)
T ss_dssp THHHHHHTTTCCEEEEEESSSGGGGTTTTCS
T ss_pred hHHHHhccCCcCcEEEEeCCHhHHHHHhCCc
Confidence 33322221 2678999999999999988653
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.06 E-value=5.6e-06 Score=76.88 Aligned_cols=41 Identities=7% Similarity=0.092 Sum_probs=36.8
Q ss_pred CCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 010820 434 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 475 (500)
Q Consensus 434 P~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i 475 (500)
-+...+..+++.++++ ++++++|||+.||+.+...+|..++
T Consensus 207 ~K~~~l~~l~~~~~i~-~~~vi~~GD~~ND~~Ml~~a~~~va 247 (283)
T d2b30a1 207 DKYTGINYLLKHYNIS-NDQVLVVGDAENDIAMLSNFKYSFA 247 (283)
T ss_dssp CHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHSCSEEEE
T ss_pred hhHHHHHHHhhhcccc-cceEEEecCChhhHHHHHhCCcEEE
Confidence 4778899999999998 9999999999999999999997544
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.05 E-value=1.5e-05 Score=71.41 Aligned_cols=37 Identities=16% Similarity=0.090 Sum_probs=29.6
Q ss_pred HHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEE
Q 010820 439 YVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 439 ~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v 477 (500)
+...+++++++ +++++.|||+.||+.+.+.+|. .|.|
T Consensus 192 l~~~~~~l~i~-~~~~iafGD~~NDl~Ml~~a~~-~vaV 228 (232)
T d1xvia_ 192 IIATYQQLSGK-RPTTLGLGDGPNDAPLLEVMDY-AVIV 228 (232)
T ss_dssp HHHHHHHHHSS-CCEEEEEESSGGGHHHHHTSSE-EEEC
T ss_pred HHHHHHHcCCC-hhcEEEEcCCHhHHHHHHhCCe-EEEE
Confidence 33344567898 9999999999999999999997 4444
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.94 E-value=1.2e-05 Score=72.63 Aligned_cols=43 Identities=9% Similarity=0.061 Sum_probs=35.3
Q ss_pred CHHHHHHHHHHcC-CCCCCcEEEEeCCHhhHHHHHHcCCcEEEEc
Q 010820 435 ETPSYVEITNSLG-VDKPSEILFVTDVYQEATAAKAAGLEVVISI 478 (500)
Q Consensus 435 ~p~~~~~~l~~l~-v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~ 478 (500)
+......++++++ .. +++++.|||+.||+.+...+|..++.-|
T Consensus 180 K~~al~~l~~~~~~~~-~~~~~a~GD~~ND~~Ml~~a~~~va~~N 223 (243)
T d1wzca1 180 KGKAAKILLDFYKRLG-QIESYAVGDSYNDFPMFEVVDKVFIVGS 223 (243)
T ss_dssp HHHHHHHHHHHHHTTS-CEEEEEEECSGGGHHHHTTSSEEEEESS
T ss_pred cHHHHHHHHHHhcCCC-cccEEEEcCCHhHHHHHHcCCcEEEeCC
Confidence 5667788898884 76 8899999999999999999996555433
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.84 E-value=7.3e-05 Score=61.41 Aligned_cols=86 Identities=17% Similarity=0.179 Sum_probs=67.5
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEE
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 455 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l 455 (500)
++.|++.++++.|++.|+++.++|+........+-+.+ ++..+|.. -.|+--..+.+++.- ...++
T Consensus 21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~l---gI~~v~~~---------~~p~~k~~~v~~~q~--~~~v~ 86 (135)
T d2b8ea1 21 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL---NLDLVIAE---------VLPHQKSEEVKKLQA--KEVVA 86 (135)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH---TCSEEECS---------CCHHHHHHHHHHHTT--TSCEE
T ss_pred CCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhh---hhhhhccc---------cchhHHHHHHHHHHc--CCEEE
Confidence 47899999999999999999999999999999998888 44433321 234444455666664 35889
Q ss_pred EEeCCHhhHHHHHHcCCcEE
Q 010820 456 FVTDVYQEATAAKAAGLEVV 475 (500)
Q Consensus 456 ~VGDs~~Di~aA~~aG~~~i 475 (500)
||||..+|..+.+.+++...
T Consensus 87 ~vGDg~nD~~aL~~Advgia 106 (135)
T d2b8ea1 87 FVGDGINDAPALAQADLGIA 106 (135)
T ss_dssp EEECSSSSHHHHHHSSEEEE
T ss_pred EEeCCCCcHHHHHhCCeeee
Confidence 99999999999999987644
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=97.82 E-value=2.4e-05 Score=72.23 Aligned_cols=40 Identities=18% Similarity=0.183 Sum_probs=36.5
Q ss_pred CCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcE
Q 010820 434 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV 474 (500)
Q Consensus 434 P~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~ 474 (500)
-|....+.++++++++ ++++++|||+.||+.+.+.+|..+
T Consensus 190 ~K~~ai~~l~~~~~i~-~~~vva~GD~~ND~~ml~~~~~sv 229 (267)
T d1nf2a_ 190 DKGKALRFLRERMNWK-KEEIVVFGDNENDLFMFEEAGLRV 229 (267)
T ss_dssp CHHHHHHHHHHHHTCC-GGGEEEEECSHHHHHHHTTCSEEE
T ss_pred chhHHHHHHHHhhccC-cccEEEEcCCcchHHHHHhCCcEE
Confidence 4788999999999998 999999999999999999999753
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.27 E-value=0.00034 Score=63.07 Aligned_cols=42 Identities=14% Similarity=0.202 Sum_probs=37.0
Q ss_pred CCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 010820 433 KRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 475 (500)
Q Consensus 433 KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i 475 (500)
.-+......++++++++ ++++++|||+.||+.+.+.+|...+
T Consensus 161 ~~K~~a~~~l~~~~gi~-~~~~v~~GD~~ND~~Ml~~~~~~va 202 (244)
T d1s2oa1 161 SNKGNATQYLQQHLAME-PSQTLVCGDSGNDIGLFETSARGVI 202 (244)
T ss_dssp CSHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHTSSSEEEE
T ss_pred cchhHHHHHHHHhccCC-hhhEEEEcCCCCCHHHHhhCCcEEE
Confidence 33778899999999998 9999999999999999999986543
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.18 E-value=0.0011 Score=56.23 Aligned_cols=100 Identities=12% Similarity=0.058 Sum_probs=69.2
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccccc-cc-----------------c-cccccCCCCH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS-GF-----------------F-DTAVGNKRET 436 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~-~~-----------------~-d~~~~~KP~p 436 (500)
++.|+++++|+.|++.|+++.++|+........+-+.+|+..-..... .. + .......-.|
T Consensus 20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~p 99 (168)
T d1wpga2 20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEP 99 (168)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCCH
T ss_pred CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccch
Confidence 688999999999999999999999999999999999986532211110 00 0 0011122244
Q ss_pred HHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 010820 437 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 437 ~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
+--..+.+.+.-. ...+.||||+.||..+-+.+.+....
T Consensus 100 ~~K~~lv~~l~~~-g~~Va~vGDG~nD~~AL~~AdvGIa~ 138 (168)
T d1wpga2 100 SHKSKIVEYLQSY-DEITAMTGDGVNDAPALKKAEIGIAM 138 (168)
T ss_dssp HHHHHHHHHHHHT-TCCEEEEECSGGGHHHHHHSSEEEEE
T ss_pred hHHHHHHHHHHhc-ccceeEEecCCCCHHHHHhCCEEEEe
Confidence 4444444444443 56799999999999999999865433
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=96.89 E-value=0.00054 Score=54.87 Aligned_cols=35 Identities=11% Similarity=0.014 Sum_probs=29.4
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIF 410 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l 410 (500)
+|+|++.+.|+.|+++|+.+.+.|...........
T Consensus 21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~ 55 (122)
T d2obba1 21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAI 55 (122)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHH
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHH
Confidence 48899999999999999999999998765544433
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=96.82 E-value=0.0026 Score=55.81 Aligned_cols=44 Identities=16% Similarity=0.192 Sum_probs=29.7
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccC
Q 010820 451 PSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE 499 (500)
Q Consensus 451 p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e 499 (500)
.+++++|||+.||+.+-..+|......+ +.. ...+.+++++..|
T Consensus 170 ~~~~i~~GDs~ND~~Mf~~~~~~~av~~-g~~----~~~A~~~~~~~~e 213 (229)
T d1u02a_ 170 ERPAIIAGDDATDEAAFEANDDALTIKV-GEG----ETHAKFHVADYIE 213 (229)
T ss_dssp TSCEEEEESSHHHHHHHHTTTTSEEEEE-SSS----CCCCSEEESSHHH
T ss_pred cccceeecCCCChHHHHhccCCeEEEEe-CCC----CccCeEEcCCHHH
Confidence 4689999999999999999876543322 211 2234677776544
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.11 E-value=0.0028 Score=56.03 Aligned_cols=29 Identities=10% Similarity=-0.099 Sum_probs=23.4
Q ss_pred CCcEEEEeC----CHhhHHHHHHcCCcEEEEcC
Q 010820 451 PSEILFVTD----VYQEATAAKAAGLEVVISIR 479 (500)
Q Consensus 451 p~~~l~VGD----s~~Di~aA~~aG~~~i~v~~ 479 (500)
+++++.||| +.||+++.+.+|...+.++.
T Consensus 198 ~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~ 230 (243)
T d2amya1 198 YKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA 230 (243)
T ss_dssp CSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred cceEEEEcCCCCCCCCcHHHHHccCCcEEEeCC
Confidence 789999999 67999999999976676654
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=95.74 E-value=0.0037 Score=49.79 Aligned_cols=27 Identities=30% Similarity=0.362 Sum_probs=24.8
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCc
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGS 402 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~ 402 (500)
.|.+++.+.|..|+++|+++.+.|...
T Consensus 24 ~P~~~~Ie~l~~l~~~G~~Iii~TaR~ 50 (124)
T d1xpja_ 24 LPRLDVIEQLREYHQLGFEIVISTARN 50 (124)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CcCHHHHHHHHHHHHCCCEEEEEecCC
Confidence 488899999999999999999999874
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.63 E-value=0.066 Score=46.80 Aligned_cols=102 Identities=13% Similarity=0.026 Sum_probs=68.9
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccc----c---------------------------
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY----L--------------------------- 422 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~----f--------------------------- 422 (500)
...+.||+.++|+.|.+. ++.+|+|.+...+++++.+.+|+.+-..+ +
T Consensus 79 ~~~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~ee 157 (308)
T d1y8aa1 79 SAKFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEE 157 (308)
T ss_dssp HCCBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHH
T ss_pred ceeecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCceeecccccccccCCChHHHHHHHHHhhhccCccHHH
Confidence 457999999999999765 89999999999999999988865311000 1
Q ss_pred -----cccccc------cccCCC-----CHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHH---cCCcEEEEcC
Q 010820 423 -----SGFFDT------AVGNKR-----ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKA---AGLEVVISIR 479 (500)
Q Consensus 423 -----~~~~d~------~~~~KP-----~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~---aG~~~i~v~~ 479 (500)
+..|.. ...-|+ +..+...+++..+++ + .++||||..|+++-+. .|--+|.+|.
T Consensus 158 l~e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~-~--~~~VGDSITDve~Lr~~r~~gGlaIsFNG 230 (308)
T d1y8aa1 158 LFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGID-F--PVVVGDSISDYKMFEAARGLGGVAIAFNG 230 (308)
T ss_dssp HHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCS-S--CEEEECSGGGHHHHHHHHHTTCEEEEESC
T ss_pred HHHHHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccccCC-c--ceeccCccccHHHHHHHhcCCCeeEEecC
Confidence 111100 001133 445667777778887 4 3999999999987665 4555566654
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.29 E-value=0.043 Score=47.73 Aligned_cols=41 Identities=5% Similarity=-0.098 Sum_probs=30.3
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEeCCH----hhHHHHHHcCCcEEEEcC
Q 010820 435 ETPSYVEITNSLGVDKPSEILFVTDVY----QEATAAKAAGLEVVISIR 479 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~~p~~~l~VGDs~----~Di~aA~~aG~~~i~v~~ 479 (500)
|....+.+++ .+ +++++.|||+. ||+++-+.+|...+.|..
T Consensus 186 Kg~al~~L~~---~~-~~ev~afGD~~~~G~ND~eml~~a~~~~~av~n 230 (244)
T d2fuea1 186 KRYCLDSLDQ---DS-FDTIHFFGNETSPGGNDFEIFADPRTVGHSVVS 230 (244)
T ss_dssp TTHHHHHHTT---SC-CSEEEEEESCCSTTSTTHHHHHSTTSEEEECSS
T ss_pred HHHHHHHHhc---CC-hhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCC
Confidence 4445555443 34 88999999974 999999999977766643
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.21 E-value=0.028 Score=47.79 Aligned_cols=83 Identities=13% Similarity=0.105 Sum_probs=58.2
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
....||+.++|+.+.+. +.++|.|.+.+.++..+++.+. -...|...+ +.....++ .+.+-++.++-+ .+
T Consensus 54 v~~RP~l~eFL~~l~~~-yei~I~Ta~~~~YA~~il~~ld---p~~~~~~~~~r~~c~~~~~---~~~KdL~~l~~~-l~ 125 (181)
T d1ta0a_ 54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLD---KWGAFRARLFRESCVFHRG---NYVKDLSRLGRD-LR 125 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHC---SSCCEEEEECGGGSEEETT---EEECCGGGSCSC-GG
T ss_pred EecCCCHHHHHHHHHhc-eEEEEEcCCcHHHHHHHHHHhc---cCCceeEEEEeeeeeecCC---cccccHhhcCCC-HH
Confidence 46889999999999875 9999999999999999998883 233332222 22111111 122345667776 89
Q ss_pred cEEEEeCCHhhHH
Q 010820 453 EILFVTDVYQEAT 465 (500)
Q Consensus 453 ~~l~VGDs~~Di~ 465 (500)
++++|+|++.-..
T Consensus 126 ~vvivDd~~~~~~ 138 (181)
T d1ta0a_ 126 RVLILDNSPASYV 138 (181)
T ss_dssp GEEEECSCGGGGT
T ss_pred HeEEEcCChhhhh
Confidence 9999999986543
|