Citrus Sinensis ID: 010863

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------50
Protein Sequence
MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEESTRAITGTNPILSSSSHHQPGIVAGASSHVNLQIPQFNPQDFSAFSLKKEQQSYSLRQEMPPWLGSQQPSILGSAVPGLGQPPSSSHTVDHLSSPSSSIFNTRLHQDHQFTQTTHQDLTRNDHPANPNPSLGPTLSVPHTNYHQAMASAFPHMSATALLQKAAQMGATMSSSKASTATGNSSSSSSPAHHAALTRPHQQPPPPQQAHVSATPEHPAGNNKTKTTTGFGLNLSSREGVVHGLTPFGTKTSGGGSSGPFIQEMLMNTSFSSGYAAASPFDDALTFGGVFNSKKEPHLNHSFNESSSLSRTSGINDHGEEMTRDFLGLRALSQTDILNIAGLGNCIDTRSSHEQQLNHSQKPWQG
Secondary Structure (PSIPRED)
ccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
cccccEEEEEccccccHHHHHHHHcccccccccccccccccccEEEEEcccccccccccHHHHccHHHHHHHHcccccccccEccccccHEEEHccHHHHHccccccEEEcccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccHccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccHHHccccccccHHHHHHHccccccccccHHHHHHHcccccccc
Coil and Loop (DISEMBL)
MATNRFVCEICNkgfqrdqnlqlhrrghnlpwklkqRTSKEIRkkvyvcpepncvhhdpsralgdltgikkhfcrkhgekkwkcdkcskryavqsdwkahsktcgtreyrcdcgtlfsrrdsfITHRAFCDALAEEStraitgtnpilsssshhqpgivagasshvnlqipqfnpqdfsafslkKEQQSYSlrqemppwlgsqqpsilgsavpglgqppssshtvdhlsspsssifntrlhqdhqftqtthqdltrndhpanpnpslgptlsvphtnyhqAMASAFPHMSATALLQKAAQMGatmssskastatgnsssssspahhaaltrphqqppppqqahvsatpehpagnnktktttgfglnlssregvvhgltpfgtktsgggssgpFIQEMLMntsfssgyaaaspfddaltfggvfnskkephlnhsfnessslsrtsgindhgeemTRDFLGLRALSQTDIlniaglgncidtrssheqqlnhsqkpwqg
Flexible Loop (DISEMBL)
MATNRFVCEICNkgfqrdqnlqlhrrghnlpwklkqrtskEIRKKVYvcpepncvhhdpsralgdlTGIKKHFCRkhgekkwkcdkcskryavqsdwkahsktcgtreyrcDCGTLFSRRDSFITHRAFCDALAEESTRAITGTNPILSSSSHHQPGIVAGASSHVNLQIPQFNPQDFSAFSLKKEQQSYSLRQEMPPWLGSQQPSILGSAVPGLGQPPSSSHTVDHLSSPSSSIFNTRLHQDHQFTQTTHQDLTRNDHPANPNPSLGPTLSVPHTNYHQAMASAFPHMSATALLQKAAQMGATMSSSKASTATGNSSSSSSPAHHAALTRPHQQPPPPQQAHVSATPEHPAGNNKTKTTTGFGLNLSSREGVVHGLTPFGTKTSGGGSSGPFIQEMLMNTSFSSGYAAASPFDDALTFGGVFNSKKEPhlnhsfnessslsrTSGINDHGEEMTRDFLGLRALSQTDILNIAGLGNCIDTRssheqqlnhsqkpwqg
Low Complexity Region (SEG)
MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEESTRAITGTNPILSSSSHHQPGIVAGASSHVNLQIPQFNPQDFSAFSLKKEQQSYSLRQEMPPWLGSQQPSILGSAVPGLGQPPSSSHTVDHLSSPSSSIFNTRlhqdhqftqtthqdltRNDHPANPNPSLGPTLSVPHTNYHQAMASAFPHMSATALLQKAAQMGatmssskastatgnsssssspahhaaLTRPHqqppppqqAHVSATPEHPAgnnktktttgFGLNLSSREGVVHGLTPFGTKTsgggssgPFIQEMLMNTSFSSGYAAASPFDDALTFGGVFNSKKEPHLNHSFNESSSLSRTSGINDHGEEMTRDFLGLRALSQTDILNIAGLGNCIDTRSSHEQQLNHSQKPWQG
Disordered region (IsUnstruct)
****RFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEESTRAI***************************************************************************************************************************************************************************************************************************************VVHGL********************L****F*SGYAAASPFDDALTFGGVF*********************************DFLGLRALSQTDILNIAGLGNCID******************
Disordered Region (DISOPRED)
MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWK************VYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEESTR**T*************************************************************************************************************************************************************************************************************************************************************************************************************************RDFLGLRALSQTDILNIAGLGNC********************
Disordered Region (DISEMBL)
MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEESTRAITGTNPILSSSSHHQPGIVAGASSHVNLQIPQFNPQDFSAFSLKKEQQSYSLRQEMPPWLGSQQPSILGSAVPG*****************SSSIFNTRLHQDHQFTQTTHQDLTRNDHPANPNPSLGPTLSVPHTNYHQAMASAFPHMSATALLQK*******************************************************GNNKTKTTTGFGLNLSSREGVVHGLTPFGTKTSGGGSSGPFIQEMLMNTSFSSGYAAASPFDDALTFGGVFNSKKEPHLNH***********SGINDHGEEMTRDFLGLRALSQTDILNIAGLGNCIDTR****************
Disordered Region (DISPRO)
**TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEESTR****************************************************************************************************************************************************************Q*G**************************LTRPHQQPPPPQQAHV*******AGNN*TKTTTGFGLNLSSREGVVHGLTPFGTKTSGGGSSGPFIQEMLMNTSFSSGYAAASPFDDALTFGGVFN****************************EMTRDFLGLRALSQTDILNIAGLGNCIDT*****************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEESTRAITGTNPILSSSSHHQPGIVAGASSHVNLQIPQFNPQDFSAFSLKKEQQSYSLRQEMPPWLGSQQPSILGSAVPGLGQPPSSSHTVDHLSSPSSSIFNTRLHQDHQFTQTTHQDLTRNDHPANPNPSLGPTLSVPHTNYHQAMASAFPHMSATALLQKAAQMGATMSSSKASTATGNSSSSSSPAHHAALTRPHQQPPPPQQAHVSATPEHPAGNNKTKTTTGFGLNLSSREGVVHGLTPFGTKTSGGGSSGPFIQEMLMNTSFSSGYAAASPFDDALTFGGVFNSKKEPHLNHSFNESSSLSRTSGINDHGEEMTRDFLGLRALSQTDILNIAGLGNCIDTRSSHEQQLNHSQKPWQG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	498	2.2.26 [Sep-21-2011]
Q9FFH3	466	Zinc finger protein NUTCR	no	no	0.542	0.579	0.517	1e-79
Q9ZWA6	506	Zinc finger protein MAGPI	no	no	0.317	0.312	0.796	4e-79
Q700D2	503	Zinc finger protein JACKD	no	no	0.305	0.302	0.793	2e-75
Q9C8N5	499	Protein SENSITIVE TO PROT	no	no	0.345	0.344	0.312	2e-18
Q943I6	522	Zinc finger protein STOP1	no	no	0.365	0.348	0.283	2e-18
Q2QX40	465	Zinc finger protein STAR3	no	no	0.244	0.262	0.350	5e-17
Q8VWG3	303	Protein TRANSPARENT TESTA	no	no	0.246	0.405	0.353	1e-13
O43313	823	ATM interactor OS=Homo sa	yes	no	0.238	0.144	0.314	1e-11
Q6P9S1	818	ATM interactor OS=Mus mus	yes	no	0.232	0.141	0.315	1e-10
Q6PGE4	1016	Zinc finger protein 316 O	no	no	0.204	0.100	0.306	8e-07

>sp|Q9FFH3|NUC_ARATH Zinc finger protein NUTCRACKER OS=Arabidopsis thaliana GN=NUC PE=2 SV=1

 Score =  297 bits (761), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 166/321 (51%), Positives = 192/321 (59%), Gaps = 51/321 (15%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPS 60
           MATNRF+CE+C KGFQRDQNLQLHRRGHNLPWKLKQRTSKE+RK+VYVCPE  CVHH  S
Sbjct: 61  MATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCVHHHSS 120

Query: 61  RALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRR 120
           RALGDLTGIKKHFCRKHGEKKW C+KC+KRYAVQSDWKAHSKTCGTREYRCDCGT+FSRR
Sbjct: 121 RALGDLTGIKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRR 180

Query: 121 DSFITHRAFCDALAEESTRAITGTNPILSSSSHHQPGIVAGASSHVNLQ--------IPQ 172
           DSFITHRAFCDALAEE+ +        +++ SH      AGA   VNL         IP 
Sbjct: 181 DSFITHRAFCDALAEETAK--------INAVSHLNGLAAAGAPGSVNLNYQYLMGTFIPP 232

Query: 173 FNPQDFSAFSLKKEQQSYSLRQEMPPWLGSQQPSILGSAVPGLGQPPSSSHTVDHLSSPS 232
             P     F  + +       Q   P   S     +G  +      P       +  + S
Sbjct: 233 LQP-----FVPQPQTNPNHHHQHFQPPTSSSLSLWMGQDIAPPQPQPDYDWVFGNAKAAS 287

Query: 233 SSIFNTRLHQDHQFTQTTHQ-----------DLTRNDHPANPNPSLGPTLSVPHTNYHQA 281
           + I N   H D Q TQ  +             L  +D P N N                 
Sbjct: 288 ACIDNNNTH-DEQITQNANASLTTTTTLSAPSLFSSDQPQNAN----------------- 329

Query: 282 MASAFPHMSATALLQKAAQMG 302
            A++  +MSATALLQKAA++G
Sbjct: 330 -ANSNVNMSATALLQKAAEIG 349

Putative transcription factor.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZWA6|MGP_ARATH Zinc finger protein MAGPIE OS=Arabidopsis thaliana GN=MGP PE=1 SV=1

 Score =  295 bits (756), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 133/167 (79%), Positives = 148/167 (88%), Gaps = 9/167 (5%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPS 60
           MATNRF+CEIC KGFQRDQNLQLHRRGHNLPWKLKQRTSKE+RK+VYVCPE +CVHH P+
Sbjct: 65  MATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSCVHHHPT 124

Query: 61  RALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRR 120
           RALGDLTGIKKHFCRKHGEKKWKC+KC+KRYAVQSDWKAHSKTCGTREYRCDCGT+FSRR
Sbjct: 125 RALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRR 184

Query: 121 DSFITHRAFCDALAEESTRAITGTNPILSSSSHHQPGIVAGASSHVN 167
           DSFITHRAFCDALAEE+ R        L+++SH +    A A S++N
Sbjct: 185 DSFITHRAFCDALAEETAR--------LNAASHLKS-FAATAGSNLN 222

Probable transcription factor that regulates tissue boundaries and asymmetric cell division. Might be involved in the sequestration of 'SHORT-ROOT' to the nucleus.

Arabidopsis thaliana (taxid: 3702)

>sp|Q700D2|JKD_ARATH Zinc finger protein JACKDAW OS=Arabidopsis thaliana GN=JKD PE=1 SV=1

 Score =  283 bits (724), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 123/155 (79%), Positives = 141/155 (90%), Gaps = 3/155 (1%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKE-IRKKVYVCPEPNCVHHDP 59
           MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQR+ +E I+KKVY+CP   CVHHD 
Sbjct: 77  MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSKQEVIKKKVYICPIKTCVHHDA 136

Query: 60  SRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSR 119
           SRALGDLTGIKKH+ RKHGEKKWKC+KCSK+YAVQSDWKAH+KTCGTREY+CDCGTLFSR
Sbjct: 137 SRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTREYKCDCGTLFSR 196

Query: 120 RDSFITHRAFCDALAEESTR--AITGTNPILSSSS 152
           +DSFITHRAFCDAL EE  R  +++  NP++S+++
Sbjct: 197 KDSFITHRAFCDALTEEGARMSSLSNNNPVISTTN 231

Probable transcription factor that regulates tissue boundaries and asymmetric cell division by a rapid up-regulation of 'SCARECROW' (SCR), thus controlling the nuclear localization of 'SHORT-ROOT' (SHR) and restricting its action. Required for radial patterning and stem cell maintenance. Counteracted by 'MAGPIE' (MGP).

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C8N5|STOP1_ARATH Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 OS=Arabidopsis thaliana GN=STOP1 PE=2 SV=1

 Score = 94.4 bits (233), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 23/195 (11%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKV----------YVCP 50
           +A +   C IC KGF+RD NL++H RGH   +K     +K  ++ V          Y CP
Sbjct: 239 LAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKESVPGSEPMLIKRYSCP 298

Query: 51  EPNCV---HHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC-SKRYAVQSDWKAHSKTCGT 106
              C     H   + L  +  +K H+ R H +K + C +C +K+++V +D K H K CG 
Sbjct: 299 FLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIADLKTHEKHCGK 358

Query: 107 REYRCDCGTLFSRRDSFITHRAFCDA------LAEESTRAITGTNPILSSSSHHQPGIVA 160
            ++ C CGT FSR+D    H A          L E    A T T    S   ++  G+V 
Sbjct: 359 NKWLCSCGTTFSRKDKLFGHIALFQGHTPAIPLEETKPSASTSTQRGSSEGGNNNQGMVG 418

Query: 161 ---GASSHVNLQIPQ 172
              G++S+ N +  Q
Sbjct: 419 FNLGSASNANQETTQ 433

Probable transcription factor. Plays a critical role in tolerance to major stress factors in acid soils such as proton H(+) and aluminum ion Al(3+). Required for the expression of genes in response to acidic stress (e.g. ALMT1 and MATE), and Al-activated citrate exudation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q943I6|STOP1_ORYSJ Zinc finger protein STOP1 homolog OS=Oryza sativa subsp. japonica GN=Os01g0871200 PE=2 SV=1

 Score = 94.0 bits (232), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 26/208 (12%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKV--------YVCPEP 52
           +A +   C IC KGF+RD NL++H RGH   +K     +K  +           Y CP  
Sbjct: 277 LAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSLESAPVTRYSCPYV 336

Query: 53  NCV---HHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC-SKRYAVQSDWKAHSKTCGTRE 108
            C     H   + L  +  +K H+ R H +K + C +C +K+++V +D K H K CG  +
Sbjct: 337 GCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLKTHEKHCGRDK 396

Query: 109 YRCDCGTLFSRRDSFITHRAF---------CDAL----AEESTRAITGTNPILSSSSHHQ 155
           + C CGT FSR+D    H A           D +    A E  +     N ++ S+ ++ 
Sbjct: 397 WLCSCGTTFSRKDKLFGHVALFQGHTPALPMDDIKVTGASEQPQGSEAMNTMVGSAGYNF 456

Query: 156 PGIVAGASSHVNLQIPQFNPQDFSAFSL 183
           PG  +    ++++++   +P+ FS  S 
Sbjct: 457 PGSSSDDIPNLDMKMAD-DPRYFSPLSF 483

Probable transcription factor that may be involved in aluminum tolerance.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q2QX40|ART1_ORYSJ Zinc finger protein STAR3 OS=Oryza sativa subsp. japonica GN=STAR3 PE=2 SV=1

 Score = 89.7 bits (221), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 67/137 (48%), Gaps = 15/137 (10%)

Query: 8   CEICNKGFQRDQNLQLHRRGHNLPWK-----------LKQRTSKEIRKKVYVCPEPNCVH 56
           C IC KGF+RD NL++H RGH   +K            +        ++ Y CP   C  
Sbjct: 231 CGICGKGFKRDANLRMHMRGHGDEYKSAAALAKPPPPPEGEEQPPQPERRYSCPHAGCKR 290

Query: 57  ---HDPSRALGDLTGIKKHFCRKHGEKKWKCDKC-SKRYAVQSDWKAHSKTCGTREYRCD 112
              H   + L  +  +K H+ R H EK+  C +C +KR++V +D K H K CG   + C 
Sbjct: 291 NRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEKHCGRDRWLCS 350

Query: 113 CGTLFSRRDSFITHRAF 129
           CGT FSR+D    H A 
Sbjct: 351 CGTSFSRKDKLFAHVAL 367

Transcriptional activator that regulates the expression of genes involved in aluminum (Al) tolerance. Binds to the promoter of STAR1 and regulates transcript expression of STAR1 STAR2 and ART1 required for Al tolerance.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8VWG3|TT1_ARATH Protein TRANSPARENT TESTA 1 OS=Arabidopsis thaliana GN=TT1 PE=2 SV=1

 Score = 78.6 bits (192), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 66/133 (49%), Gaps = 10/133 (7%)

Query: 6   FVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKK------VYVCPE--PNCVHH 57
           F C +C K F R  NLQ+H  GH   ++    + K  + +       Y C E   N + H
Sbjct: 145 FSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQPRAMLGIPCYCCVEGCRNHIDH 204

Query: 58  DPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLF 117
             S+ L D   ++ H+ RKHG K + C  C K  AV+ DW+ H K CG R + C CG+ F
Sbjct: 205 PRSKPLKDFRTLQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTHEKNCGKR-WVCVCGSDF 263

Query: 118 SRRDSFITH-RAF 129
             + S   H +AF
Sbjct: 264 KHKRSLKDHVKAF 276

May act as a transcriptional regulator involved in the differentiation of young endothelium. Altered differentiation results in incompetence for pigments synthesis and the lack of condensed tannins in the seed coat.

Arabidopsis thaliana (taxid: 3702)

>sp|O43313|ATMIN_HUMAN ATM interactor OS=Homo sapiens GN=ATMIN PE=1 SV=2

 Score = 71.6 bits (174), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 8/127 (6%)

Query: 6   FVCEI--CNKGFQRDQNLQLHR-RGHNLPWKLKQRTSKEIRK---KVYVCPEPNCVHHDP 59
            +C +  C K       L +H  + H L   +   T ++  K   K Y CP   C    P
Sbjct: 84  ILCTVRGCGKILPNSPALNMHLVKSHRLQDGIVNPTIRKDLKTGPKFYCCPIEGC-PRGP 142

Query: 60  SRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSR 119
            R     + +K+HF + H EKK KC KCS  Y  + D K H++ CG + +RC CG  ++ 
Sbjct: 143 ERPFSQFSLVKQHFMKMHAEKKHKCSKCSNSYGTEWDLKRHAEDCG-KTFRCTCGCPYAS 201

Query: 120 RDSFITH 126
           R +  +H
Sbjct: 202 RTALQSH 208

Plays a crucial role in cell survival and RAD51 foci formation in response to methylating DNA damage. Involved in regulating the activity of ATM in the absence of DNA damage. May play a role in stabilizing ATM.

Homo sapiens (taxid: 9606)

>sp|Q6P9S1|ATMIN_MOUSE ATM interactor OS=Mus musculus GN=Atmin PE=2 SV=2

 Score = 68.6 bits (166), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 14/130 (10%)

Query: 6   FVCEI--CNKGFQRDQNLQLHR-RGHNLPWKLKQRTSKEIRK------KVYVCPEPNCVH 56
            +C +  C K       L +H  + H L   +   T   IRK      K Y CP   C  
Sbjct: 80  ILCTVRGCGKILPNSPALNMHLVKSHRLQDGIVNPT---IRKDLTTAPKFYCCPIKGC-P 135

Query: 57  HDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTL 116
             P R     + +K+HF + H EKK KC KCS  Y  + D K H + CG + ++C CG  
Sbjct: 136 RGPDRPFSQFSLVKQHFMKMHAEKKHKCSKCSNSYGTEWDLKRHEEDCG-KTFQCTCGCP 194

Query: 117 FSRRDSFITH 126
           ++ R +  +H
Sbjct: 195 YASRTALQSH 204

Plays a crucial role in cell survival and RAD51 foci formation in response to methylating DNA damage. Involved in regulating the activity of ATM in the absence of DNA damage. May play a role in stabilizing ATM.

Mus musculus (taxid: 10090)

>sp|Q6PGE4|ZF316_MOUSE Zinc finger protein 316 OS=Mus musculus GN=Znf316 PE=2 SV=1

 Score = 55.8 bits (133), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 53/124 (42%), Gaps = 22/124 (17%)

Query: 6   FVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGD 65
           FVC +C  GF R  +L  H R H               ++ Y C E  C      R  G 
Sbjct: 791 FVCGVCGAGFSRRAHLTAHGRAHT-------------GERPYACAE--C-----GRRFGQ 830

Query: 66  LTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRC-DCGTLFSRRDSF 123
              + +H      EK  +C  C K +   SD+K H +T  G + +RC DCG  F++R + 
Sbjct: 831 SAALTRHQWAHAEEKPHRCPDCGKGFGHSSDFKRHRRTHTGEKPFRCADCGRGFAQRSNL 890

Query: 124 ITHR 127
             HR
Sbjct: 891 AKHR 894

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	498
359482846	509	PREDICTED: zinc finger protein NUTCRACKE	0.861	0.842	0.567	1e-133
147854387	532	hypothetical protein VITISV_006257 [Viti	0.861	0.806	0.567	1e-133
255572931	552	nucleic acid binding protein, putative [	0.905	0.817	0.567	1e-125
356528841	524	PREDICTED: zinc finger protein NUTCRACKE	0.833	0.791	0.534	1e-123
356522186	498	PREDICTED: zinc finger protein NUTCRACKE	0.785	0.785	0.524	1e-120
359475946	509	PREDICTED: zinc finger protein NUTCRACKE	0.845	0.827	0.500	1e-112
87162706	480	Zinc finger, C2H2-type [Medicago truncat	0.783	0.812	0.496	1e-111
357454633	545	Zinc finger protein [Medicago truncatula	0.783	0.715	0.496	1e-111
302398661	539	C2H2L domain class transcription factor	0.869	0.803	0.518	1e-111
302398675	523	C2H2L domain class transcription factor	0.869	0.827	0.518	1e-111

>gi|359482846|ref|XP_002280155.2| PREDICTED: zinc finger protein NUTCRACKER isoform 2 [Vitis vinifera]

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 301/530 (56%), Positives = 347/530 (65%), Gaps = 101/530 (19%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPS 60
           MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKE+RKKVYVCPE +CVHHDPS
Sbjct: 49  MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKKVYVCPEASCVHHDPS 108

Query: 61  RALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRR 120
           RALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRR
Sbjct: 109 RALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRR 168

Query: 121 DSFITHRAFCDALAEESTRAITGTNPILSSSSHHQPGIVAGASSHVNLQIPQ---FNPQ- 176
           DSFITHRAFCDALAEES RAITG NP+L SS        +   SH  + + Q   FN   
Sbjct: 169 DSFITHRAFCDALAEESARAITG-NPVLLSSQAAAGPSSSTPHSHSQMSLQQQQQFNSNH 227

Query: 177 DFSAFSLKKEQQSYSLRQEM-PPWLGSQQPSILGSAVPGLGQPPSSSHTVDHLSSPSSSI 235
           DF AF +KKEQQS+S+R E+ PPW                              S SSS+
Sbjct: 228 DFHAFQMKKEQQSFSIRSEVVPPW-----------------------------LSSSSSL 258

Query: 236 FNTRLHQDHQFTQTTHQDLTRND-HPANPNPSLGPTLSVPHTNYHQAMASAFPHMSATAL 294
           F TRL  DH FTQTT QDL  +D    NPNPSLGPTL      YH  ++   PHMSATAL
Sbjct: 259 FPTRL--DHDFTQTT-QDLALHDIQNPNPNPSLGPTLPP----YHPTLS---PHMSATAL 308

Query: 295 LQKAAQMGATMSSSKASTATGNSSSSSSPAHHAALTRPHQQPPPPQQAHVSATPEHPAGN 354
           LQKAAQMGATMS +     TG S +S       A+ RPHQ       AHVSA  +H   N
Sbjct: 309 LQKAAQMGATMSKT-----TGGSGASP-----PAMIRPHQ-------AHVSA--DHSCNN 349

Query: 355 NKTKTTTGFGLNLSSRE----GVVHGLTPFGTKTSGGG-----------------SSGPF 393
                TTGFGLNLSSRE    G V GL PFG K +                    S    
Sbjct: 350 -----TTGFGLNLSSREEMGGGFVQGLAPFGNKAAAVPSAAAAAAAATGPGGGAPSPSLL 404

Query: 394 IQEMLMNTSFSSGYAAASPFDDALTFGGVFNSKKEPH-LNHSFNESSSLSRTSGINDHG- 451
           +Q+M+ + S ++G+ ++S F+DA  FGG+ NS+K  + L+ +    S+ +  +  +  G 
Sbjct: 405 LQDMMTSLSSATGFDSSS-FEDA--FGGMLNSRKNGNNLHQTLPSKSTTTTATTHHSSGG 461

Query: 452 ---EEMTRDFLGLRALSQTDILNIAGLGNCIDTRSSHEQQLNHSQKPWQG 498
              + +TRDFLGLRALS +DIL+IAGLG C++T S H+ Q N +QKPWQG
Sbjct: 462 AGNDGLTRDFLGLRALSHSDILSIAGLGTCMNT-SPHDHQ-NQTQKPWQG 509

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147854387|emb|CAN79105.1| hypothetical protein VITISV_006257 [Vitis vinifera]

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 301/530 (56%), Positives = 347/530 (65%), Gaps = 101/530 (19%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPS 60
           MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKE+RKKVYVCPE +CVHHDPS
Sbjct: 72  MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKKVYVCPEASCVHHDPS 131

Query: 61  RALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRR 120
           RALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRR
Sbjct: 132 RALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRR 191

Query: 121 DSFITHRAFCDALAEESTRAITGTNPILSSSSHHQPGIVAGASSHVNLQIPQ---FNPQ- 176
           DSFITHRAFCDALAEES RAITG NP+L SS        +   SH  + + Q   FN   
Sbjct: 192 DSFITHRAFCDALAEESARAITG-NPVLLSSQAAAGPSSSTPHSHSQMSLQQQQQFNSNH 250

Query: 177 DFSAFSLKKEQQSYSLRQEM-PPWLGSQQPSILGSAVPGLGQPPSSSHTVDHLSSPSSSI 235
           DF AF +KKEQQS+S+R E+ PPW                              S SSS+
Sbjct: 251 DFHAFQMKKEQQSFSIRSEVVPPW-----------------------------LSSSSSL 281

Query: 236 FNTRLHQDHQFTQTTHQDLTRND-HPANPNPSLGPTLSVPHTNYHQAMASAFPHMSATAL 294
           F TRL  DH FTQTT QDL  +D    NPNPSLGPTL      YH  ++   PHMSATAL
Sbjct: 282 FPTRL--DHDFTQTT-QDLALHDIQNPNPNPSLGPTLPP----YHPTLS---PHMSATAL 331

Query: 295 LQKAAQMGATMSSSKASTATGNSSSSSSPAHHAALTRPHQQPPPPQQAHVSATPEHPAGN 354
           LQKAAQMGATMS +     TG S +S       A+ RPHQ       AHVSA  +H   N
Sbjct: 332 LQKAAQMGATMSKT-----TGGSGASP-----PAMIRPHQ-------AHVSA--DHSCNN 372

Query: 355 NKTKTTTGFGLNLSSRE----GVVHGLTPFGTKTSGGG-----------------SSGPF 393
                TTGFGLNLSSRE    G V GL PFG K +                    S    
Sbjct: 373 -----TTGFGLNLSSREEMGGGFVQGLAPFGNKAAAVPSAAAAAAAATGPGGGAPSPSLL 427

Query: 394 IQEMLMNTSFSSGYAAASPFDDALTFGGVFNSKKEPH-LNHSFNESSSLSRTSGINDHG- 451
           +Q+M+ + S ++G+ ++S F+DA  FGG+ NS+K  + L+ +    S+ +  +  +  G 
Sbjct: 428 LQDMMTSLSSATGFDSSS-FEDA--FGGMLNSRKNGNNLHQTLPSKSTTTTATTHHSSGG 484

Query: 452 ---EEMTRDFLGLRALSQTDILNIAGLGNCIDTRSSHEQQLNHSQKPWQG 498
              + +TRDFLGLRALS +DIL+IAGLG C++T S H+ Q N +QKPWQG
Sbjct: 485 AGNDGLTRDFLGLRALSHSDILSIAGLGTCMNT-SPHDHQ-NQTQKPWQG 532

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255572931|ref|XP_002527396.1| nucleic acid binding protein, putative [Ricinus communis] gi|223533206|gb|EEF34962.1| nucleic acid binding protein, putative [Ricinus communis]

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 294/518 (56%), Positives = 340/518 (65%), Gaps = 67/518 (12%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKE-IRKKVYVCPEPNCVHHDP 59
           MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRT+KE IRKKVYVCPE +CVHHDP
Sbjct: 82  MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKEVIRKKVYVCPETSCVHHDP 141

Query: 60  SRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSR 119
           SRALGDLTGIKKHF RKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSR
Sbjct: 142 SRALGDLTGIKKHFSRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSR 201

Query: 120 RDSFITHRAFCDALAEESTRAITGT-NPILSSSSHHQPGIVAGASSHVNL-QIPQF--NP 175
           RDSFITHRAFCDALAEES RAIT   NP+L  S+       +   + ++L Q+PQ   + 
Sbjct: 202 RDSFITHRAFCDALAEESARAITDAPNPLLIPSNQSAAAASSATQNPISLHQVPQLMNSH 261

Query: 176 QDFSAFSLKKEQQSYS----LRQEMPPWLGSQQPSILGSAVPGLGQPPSSSHTVDHLSSP 231
           Q+  AFSLKKEQQ++S    LR E+PPWL    P +LGS       PP    T       
Sbjct: 262 QNLHAFSLKKEQQTFSTTTALRPELPPWLAC-PPGVLGSGSGHGPGPPHHQQTPIEHHHL 320

Query: 232 SSSIFNTRLHQDHQFTQTTHQDLTRNDHPANPNPSLGPTLSVPHTNYHQAMASAFPHMSA 291
           SSSI N +            QDL      +NPNPSLGPTL  PH   +QA     PHMSA
Sbjct: 321 SSSILNFQ------------QDLGS----SNPNPSLGPTL--PH---YQAAPPPSPHMSA 359

Query: 292 TALLQKAAQMGATMSSSKASTATGNSSSSSSPAHHAALTRPHQQPPPPQQAHVSATPEHP 351
           TALLQKAAQMGATM SSK +TA               + RPHQ     +QAHV+A     
Sbjct: 360 TALLQKAAQMGATM-SSKTTTA-------------GLMMRPHQHQHQHEQAHVTAD---- 401

Query: 352 AGNNKTKTTTGFGLNLSSRE---GVVHGLTPFGTKTSGGGSSGPFIQEMLMN-TSFSSGY 407
              N    TTGF LNLSSR+       G   F       G++G  +QEM+ + +S +SG+
Sbjct: 402 -STNNNANTTGFVLNLSSRDQELAASGGGGSFVHSLQAAGANGVLLQEMMNSLSSAASGF 460

Query: 408 -----AAASPFDDALTFGGVFNSKKEPHLNHSFNESSSLSRTSGINDHGEEMTRDFLGLR 462
                A A+ F+DA   G + NSKK+ +    F + S    T+  N+ GE++TRDFLGLR
Sbjct: 461 EGTATATATSFEDAFVSGVLNNSKKDGN----FLDGSLSKATTNGNNGGEDLTRDFLGLR 516

Query: 463 ALSQTDILNI-AGLGNCIDTRSSHE-QQLNHSQKPWQG 498
           A S +DILN+ AGLGNC++T  SHE QQ N SQK W+G
Sbjct: 517 AFSHSDILNMAAGLGNCVNT--SHEQQQQNQSQKTWRG 552

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356528841|ref|XP_003533006.1| PREDICTED: zinc finger protein NUTCRACKER-like [Glycine max]

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 284/531 (53%), Positives = 334/531 (62%), Gaps = 116/531 (21%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPS 60
           +ATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKE+RKKVYVCPEP+CVHHDPS
Sbjct: 77  LATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKKVYVCPEPSCVHHDPS 136

Query: 61  RALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRR 120
           RALGDLTGIKKHFCRKHGEKKWKCDKCSK+YAVQSDWKAHSKTCGTREYRCDCGTLFSRR
Sbjct: 137 RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRR 196

Query: 121 DSFITHRAFCDALAEESTRAITGTNPILSSSSHHQPGIVAGASSHVNLQIPQFNPQ-DFS 179
           DSFITHRAFCDALAEES RAI  TNP+L      Q    +       LQ  QFNPQ +  
Sbjct: 197 DSFITHRAFCDALAEESARAI--TNPLLPPQQQQQQPSSSSHHQMSTLQT-QFNPQNNLH 253

Query: 180 AFSLKKEQQSYSLRQEMPPWLGSQQPSILGSAVPGLGQPPSSSHTVD----HLSSPSSSI 235
           AF LKKEQQS+++R EMPPWLG                PP+++  VD    HLSS SSSI
Sbjct: 254 AFPLKKEQQSFNVRTEMPPWLG----------------PPAATVVVDHHHHHLSSSSSSI 297

Query: 236 FNTRLHQDHQFTQTTHQDLTRNDHPANPNPSLGPTLSVPHTNYHQAMASAFPHMSATALL 295
             +  HQ++                 NPNPSLGPTL+      ++ +A+  PHMSATALL
Sbjct: 298 MFSPPHQEN----------------PNPNPSLGPTLAA-----YKTVANP-PHMSATALL 335

Query: 296 QKAAQMGATMSSSKASTATGNSSSSSSPAHHAALTRPHQQPPPPQQAHVSATPEHPAGNN 355
           QKAAQMGATMS S      G+S + + P HH               AHVS + +  + + 
Sbjct: 336 QKAAQMGATMSRS------GSSPAMTGPHHH---------------AHVSYSADSASAH- 373

Query: 356 KTKTTTGFGLNLSSREG----------------VVHGL--TPFGTKTSGGGSSGP--FIQ 395
                  FGLNLSSRE                   HGL  +P G K     SS     + 
Sbjct: 374 -------FGLNLSSREDTTTSTTTTTTTKTATVFSHGLLSSPLGNKAGAAVSSSAPSLLH 426

Query: 396 EMLMNTSFSSGYAAASPFDDALTFGGVFNSKK-------EPHLNHSFNESSSLSRTSG-I 447
           +++ + S S      +PF+DA     + +SKK         +L+ +F+++SS +  +G I
Sbjct: 427 DVINSFSVSPSAFEGTPFEDAF----IQSSKKLDDDDHHNLYLHDTFSKTSSSTGAAGNI 482

Query: 448 NDHGEEMTRDFLGLRALSQTDILNIAGLGNCIDTRSSHEQQLNHSQKPWQG 498
           N   E +TRDFLGLR LS TDIL IAG+GNCI     H+ Q N SQKPWQG
Sbjct: 483 N---EGLTRDFLGLRPLSHTDILTIAGIGNCI-----HDHQ-NQSQKPWQG 524

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356522186|ref|XP_003529728.1| PREDICTED: zinc finger protein NUTCRACKER-like [Glycine max]

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 275/524 (52%), Positives = 313/524 (59%), Gaps = 133/524 (25%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPS 60
           +ATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKE+RKKVYVCPEP+CVHHDPS
Sbjct: 82  LATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKKVYVCPEPSCVHHDPS 141

Query: 61  RALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRR 120
           RALGDLTGIKKHFCRKHGEKKWKCDKCSK+YAVQSDWKAHSKTCGTREYRCDCGTLFSRR
Sbjct: 142 RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRR 201

Query: 121 DSFITHRAFCDALAEESTRAITGTNPILSSSSHHQPGIVAGASSHVNLQIPQFNPQDFSA 180
           DSFITHRAFCDALAEES RAI   NP+L       P     +SSH++    QFNPQ+  A
Sbjct: 202 DSFITHRAFCDALAEESARAI--ANPLLP------PQQQQSSSSHMSTLQTQFNPQNLHA 253

Query: 181 FSLKKEQQSYSLRQEMPPWLGSQQPSILGSAVPGLGQPPSSSHTVDHLSSPSSSIFNTRL 240
           F LKK         EMPPWLG                 P ++  VDH  S SSSI  +  
Sbjct: 254 FPLKK---------EMPPWLG-----------------PPATVVVDHHLSSSSSIMFSPP 287

Query: 241 HQDHQFTQTTHQDLTRNDHPANPNPSLGPTLSVPHTNYHQAMASAFPHMSATALLQKAAQ 300
           HQ+                  NPNPSLGPTL+      +Q + +  PHMSATALLQKAAQ
Sbjct: 288 HQE------------------NPNPSLGPTLAA-----YQTVPN--PHMSATALLQKAAQ 322

Query: 301 MGATMSSSKASTATGNSSSSSSPAHHAALTRPHQQPPPPQQAHVSATPEHPAGNNKTKTT 360
           MGATMS S      G++ + + P HH               AHVS               
Sbjct: 323 MGATMSRS------GSTPAMTGPHHH---------------AHVSH-------------- 347

Query: 361 TGFGLNLSSREGVV------------------HGL---TPFGTKTSGGGSSGPFIQEMLM 399
             FGLNLSSRE                     HGL   +P G K +   +       +L 
Sbjct: 348 --FGLNLSSREDTTTTTPSTTTTNANTATVFSHGLLSSSPLGNKAAAAAAVSSSAPSLLH 405

Query: 400 NT--SFSSGYA-AASPFDDALTFGGVFNSKKEPHLNHSFNESSSLSRTSGI--NDHGEEM 454
           +   SFSS  A   +PF+DA        S K+   +H+     + S+TSG   N+  E +
Sbjct: 406 DVINSFSSPSAFEGTPFEDAF-----IQSSKKLDDDHNLYLHDTFSKTSGAAGNNINEGL 460

Query: 455 TRDFLGLRALSQTDILNIAGLGNCIDTRSSHEQQLNHSQKPWQG 498
           TRDFLGLR LS  DIL IAG+GNCI     H+QQ N SQKPWQG
Sbjct: 461 TRDFLGLRPLSHADILTIAGIGNCI-----HDQQ-NQSQKPWQG 498

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359475946|ref|XP_002278933.2| PREDICTED: zinc finger protein NUTCRACKER-like [Vitis vinifera]

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 264/527 (50%), Positives = 319/527 (60%), Gaps = 106/527 (20%)

Query: 2   ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSR 61
           ATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKLKQRT+KE+RKKVYVCPEP CVHHDPSR
Sbjct: 59  ATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKEVRKKVYVCPEPTCVHHDPSR 118

Query: 62  ALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRD 121
           ALGDLTGIKKHF RKHGEKKWKC+KCSKRYAVQSDWKAHSK CGTREYRCDCGTLFSRRD
Sbjct: 119 ALGDLTGIKKHFSRKHGEKKWKCEKCSKRYAVQSDWKAHSKICGTREYRCDCGTLFSRRD 178

Query: 122 SFITHRAFCDALAEESTRAITGTNPILSSSSHHQPGIVAGASSHVNLQIPQFNPQDFSA- 180
           SFITHRAFCDALAEES RAITG NP+LSS           +SSH+NLQ PQ +     A 
Sbjct: 179 SFITHRAFCDALAEESARAITG-NPLLSSQP-------GSSSSHLNLQ-PQLHSHGLQAV 229

Query: 181 FSLKKEQQ---SYSLRQEMPPWLGSQQPSILGSAVPGLGQPPSSSHTVDHLSSPSSSIFN 237
            SLK+EQ+   S++L+ ++PPWL    P +L  A PG   PPS                 
Sbjct: 230 LSLKREQEQHHSFNLKPDIPPWLAC--PPVL-EAGPG---PPS----------------- 266

Query: 238 TRLHQDHQFTQTTHQDLTRNDHP----ANPNPSLGPTLSVPHTNYHQAMASAFPHMSATA 293
                      ++       DHP     NPNP+     ++P  ++H    +A PHMSATA
Sbjct: 267 --------IDLSSSLFSASLDHPLIYHENPNPN----STLP--SFHH---TASPHMSATA 309

Query: 294 LLQKAAQMGATMSSSKASTATGNSSSSSSPAHHAALTRPHQQPPPPQQAHVSATPEHPAG 353
           LLQ+AAQMG TM               S P+    + RPH       QAH+SA     + 
Sbjct: 310 LLQQAAQMGVTM---------------SKPSPSPPMLRPH-------QAHMSAANAGFSS 347

Query: 354 NNKTKTTTGFGLNLSSRE----GVVHGLTPFGTK---TSG-----------GGSSGPFIQ 395
                +T G  L LSSR+    G +HGL  FG+K   TSG           G ++     
Sbjct: 348 TAVATSTAGSDLGLSSRDEMASGFIHGLASFGSKAAVTSGFMEHVATGAGAGAAAPSLFH 407

Query: 396 EMLMNTSFSSGYAAASPFDDALTFGGVFNSKKEPHLNHSFNESSSLSRTSGINDHG---- 451
           +M+ + S +SG+   S F++A  F G+ N K+E +L      + + S  S  +  G    
Sbjct: 408 DMMSSLSSASGFGGPS-FEEA--FNGMLNPKRENNLQEITKTAMTKSHFSRSDHEGGGGN 464

Query: 452 EEMTRDFLGLRALSQTDILNIAGLGNCIDTRSSHEQQLNHSQKPWQG 498
           + +TRDFLGLRA S  D LNI GL   +++ S +EQQ N +Q PWQG
Sbjct: 465 DGLTRDFLGLRAFSHRDFLNIPGLDQ-MNSASPYEQQ-NQNQTPWQG 509

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|87162706|gb|ABD28501.1| Zinc finger, C2H2-type [Medicago truncatula]

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 250/504 (49%), Positives = 299/504 (59%), Gaps = 114/504 (22%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPS 60
           MATNRF+CEICNKGFQRDQNLQLH+RGHNLPWKLKQRTS EIRKKVYVCPEP CVHHDPS
Sbjct: 70  MATNRFICEICNKGFQRDQNLQLHKRGHNLPWKLKQRTSNEIRKKVYVCPEPTCVHHDPS 129

Query: 61  RALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRR 120
           RALGDLTGIKKHFCRKHGEKKWKCDKCSK+YAVQSDWKAHSKTCGTREYRCDCGTLFSRR
Sbjct: 130 RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRR 189

Query: 121 DSFITHRAFCDALAEESTRAIT--GTNPILSSSSHHQPGIVAGASSHVNLQIPQFNPQDF 178
           DSFITHRAFCDALAEES+R +    T P    +SHH            NLQ      QD 
Sbjct: 190 DSFITHRAFCDALAEESSRTVIPQPTQP----NSHHNMN---------NLQT-----QDI 231

Query: 179 SAFSLKKEQQSYSLRQEMPPWLGSQQPSILGSAVPGLGQPPSSSHTVDHLSSPSSSIFNT 238
             F+LKKE QS+++   + P    Q PS L  +            ++D LSS  SS    
Sbjct: 232 QGFTLKKEHQSFNM---LRPEQEVQIPSWLCQS------------SID-LSSNYSS---- 271

Query: 239 RLHQDHQFTQTTHQDLTRNDHPANPNPSLGPTLSVPHTNYHQAMASAFPHMSATALLQKA 298
            L QD    +             NPNP  GPT ++P    +Q  ++A PHMSATALLQKA
Sbjct: 272 -LDQDLHLYE-------------NPNPRNGPTSTLP---SYQPSSAASPHMSATALLQKA 314

Query: 299 AQMGATMSSSKASTATGNSSSSSSPAHHAALTRPHQQPPPPQQAHVSATPEHPAGNNKTK 358
           AQMGAT S S  S  +G                        QQ HVS      A NN   
Sbjct: 315 AQMGATSSCSSQSMMSGTH----------------------QQGHVSIVDS--ATNNMIN 350

Query: 359 TTTGFGLNLSSREGVVHGLTPFGTKTSGGGSSGPFIQEMLMNTSFSSGYAAASPFDDALT 418
           +   F LNLSS E                        + ++N SFSS     + F+D   
Sbjct: 351 SNGNFSLNLSSCE------------------------DQMINNSFSSSGFHGTSFEDTFA 386

Query: 419 FGGVFNSKKEPHLNHSFNESSSLSRTSGINDH-----GEEMTRDFLGLRALSQTDILNIA 473
            G + +S ++ ++NH  +  + + +T+  +D          TRDFLGL+ LS +DIL IA
Sbjct: 387 -GNILHSNQDHNINH--DGDNDIPKTTTNDDDVAAGGNNAFTRDFLGLKPLSDSDILTIA 443

Query: 474 GLGNCIDTRSSHEQQLNHSQKPWQ 497
           G+G+C++  +S+ Q+ NHSQKPW+
Sbjct: 444 GMGSCMNPSNSNHQE-NHSQKPWE 466

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357454633|ref|XP_003597597.1| Zinc finger protein [Medicago truncatula] gi|355486645|gb|AES67848.1| Zinc finger protein [Medicago truncatula]

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 250/504 (49%), Positives = 299/504 (59%), Gaps = 114/504 (22%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPS 60
           MATNRF+CEICNKGFQRDQNLQLH+RGHNLPWKLKQRTS EIRKKVYVCPEP CVHHDPS
Sbjct: 70  MATNRFICEICNKGFQRDQNLQLHKRGHNLPWKLKQRTSNEIRKKVYVCPEPTCVHHDPS 129

Query: 61  RALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRR 120
           RALGDLTGIKKHFCRKHGEKKWKCDKCSK+YAVQSDWKAHSKTCGTREYRCDCGTLFSRR
Sbjct: 130 RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRR 189

Query: 121 DSFITHRAFCDALAEESTRAIT--GTNPILSSSSHHQPGIVAGASSHVNLQIPQFNPQDF 178
           DSFITHRAFCDALAEES+R +    T P    +SHH            NLQ      QD 
Sbjct: 190 DSFITHRAFCDALAEESSRTVIPQPTQP----NSHHNMN---------NLQT-----QDI 231

Query: 179 SAFSLKKEQQSYSLRQEMPPWLGSQQPSILGSAVPGLGQPPSSSHTVDHLSSPSSSIFNT 238
             F+LKKE QS+++   + P    Q PS L  +            ++D LSS  SS    
Sbjct: 232 QGFTLKKEHQSFNM---LRPEQEVQIPSWLCQS------------SID-LSSNYSS---- 271

Query: 239 RLHQDHQFTQTTHQDLTRNDHPANPNPSLGPTLSVPHTNYHQAMASAFPHMSATALLQKA 298
            L QD    +             NPNP  GPT ++P    +Q  ++A PHMSATALLQKA
Sbjct: 272 -LDQDLHLYE-------------NPNPRNGPTSTLP---SYQPSSAASPHMSATALLQKA 314

Query: 299 AQMGATMSSSKASTATGNSSSSSSPAHHAALTRPHQQPPPPQQAHVSATPEHPAGNNKTK 358
           AQMGAT S S  S  +G                        QQ HVS      A NN   
Sbjct: 315 AQMGATSSCSSQSMMSGTH----------------------QQGHVSIVDS--ATNNMIN 350

Query: 359 TTTGFGLNLSSREGVVHGLTPFGTKTSGGGSSGPFIQEMLMNTSFSSGYAAASPFDDALT 418
           +   F LNLSS E                        + ++N SFSS     + F+D   
Sbjct: 351 SNGNFSLNLSSCE------------------------DQMINNSFSSSGFHGTSFEDTFA 386

Query: 419 FGGVFNSKKEPHLNHSFNESSSLSRTSGINDH-----GEEMTRDFLGLRALSQTDILNIA 473
            G + +S ++ ++NH  +  + + +T+  +D          TRDFLGL+ LS +DIL IA
Sbjct: 387 -GNILHSNQDHNINH--DGDNDIPKTTTNDDDVAAGGNNAFTRDFLGLKPLSDSDILTIA 443

Query: 474 GLGNCIDTRSSHEQQLNHSQKPWQ 497
           G+G+C++  +S+ Q+ NHSQKPW+
Sbjct: 444 GMGSCMNPSNSNHQE-NHSQKPWE 466

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302398661|gb|ADL36625.1| C2H2L domain class transcription factor [Malus x domestica]

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 271/523 (51%), Positives = 320/523 (61%), Gaps = 90/523 (17%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPS 60
           MATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKE+RKKVYVCPE +CVHHDPS
Sbjct: 82  MATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKKVYVCPEASCVHHDPS 141

Query: 61  RALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRR 120
           RALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRR
Sbjct: 142 RALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRR 201

Query: 121 DSFITHRAFCDALAEESTRAITGTNP---ILSSSSHHQPGIVAGASSHVNLQIPQFNPQD 177
           DSFITHRAFCDALAEES RAIT  N    +L S    Q  +      H      QFN QD
Sbjct: 202 DSFITHRAFCDALAEESARAITSANNPHHLLFSQQQQQMNLNQVQLGH------QFN-QD 254

Query: 178 FSAFSLKKEQQSY-SLRQEMPPWLGSQQPSILGSAVPGLGQPPSSSHTVDHLSSPSSSIF 236
              FSLKKEQQS+ +LR ++PPWLG                PP+   T+D  SS S    
Sbjct: 255 IHGFSLKKEQQSFTTLRPDLPPWLG----------------PPNC--TIDLSSSSSLF-- 294

Query: 237 NTRLHQDHQFTQTTHQDLTRNDH----PANPNP---SLGPTLSVPHTNYHQAMASAFPHM 289
                     + T HQDL+ +D       NPNP   SLGPTL      +H A +   PHM
Sbjct: 295 ----------SPTHHQDLSLDDSHNGTSQNPNPCPSSLGPTLPP----FHPAPS---PHM 337

Query: 290 SATALLQKAAQMGATMSSSKASTATGNSSSSSSPAHHAALTRPHQQPPPPQQAHVSATPE 349
           SATALLQKAAQMGATM S K ST T  ++++++ A    + R HQ      Q H+S    
Sbjct: 338 SATALLQKAAQMGATM-SGKHSTTTAAAAAAAASASPQPMVRVHQH----SQGHMSEFSG 392

Query: 350 HPA-----GNNKTKTTTGFGLNLSSREGVVHGLTPFGTKTSGGGSSGPFIQEMLMNTSFS 404
           H +     G N T  TTG           V G+           S    + +M+ + S  
Sbjct: 393 HVSAFAAAGANATNITTG---------PAVSGVHHHHENQHHQAS---LLHDMMNSLSSG 440

Query: 405 SGYAAASPFDDAL-TFGGVFNSKKEPHLNHS-FNESSSLSRTSGINDHGEEMTRDFLGLR 462
           +G+  A+   +A  +   + N+ K+   N + FN+S   +   G N  GE +TRDFLGLR
Sbjct: 441 TGFEGAAFELEAFGSLPNILNNAKKGSNNSTHFNKSG--NDDGGAN--GEGLTRDFLGLR 496

Query: 463 ALSQTDILNIAGLGNCIDTRSSHEQQLNHS-------QKPWQG 498
           ALS +DILNIAG+GNC+ + ++       +       QKPWQG
Sbjct: 497 ALSHSDILNIAGIGNCVSSANAAAAAAAVANTASRDHQKPWQG 539

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302398675|gb|ADL36632.1| C2H2L domain class transcription factor [Malus x domestica]

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 271/523 (51%), Positives = 320/523 (61%), Gaps = 90/523 (17%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPS 60
           MATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKE+RKKVYVCPE +CVHHDPS
Sbjct: 66  MATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKKVYVCPEASCVHHDPS 125

Query: 61  RALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRR 120
           RALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRR
Sbjct: 126 RALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRR 185

Query: 121 DSFITHRAFCDALAEESTRAITGTNP---ILSSSSHHQPGIVAGASSHVNLQIPQFNPQD 177
           DSFITHRAFCDALAEES RAIT  N    +L S    Q  +      H      QFN QD
Sbjct: 186 DSFITHRAFCDALAEESARAITSANNPHHLLFSQQQQQMNLNQVQLGH------QFN-QD 238

Query: 178 FSAFSLKKEQQSY-SLRQEMPPWLGSQQPSILGSAVPGLGQPPSSSHTVDHLSSPSSSIF 236
              FSLKKEQQS+ +LR ++PPWLG                PP+   T+D  SS S    
Sbjct: 239 IHGFSLKKEQQSFTTLRPDLPPWLG----------------PPNC--TIDLSSSSSLF-- 278

Query: 237 NTRLHQDHQFTQTTHQDLTRNDH----PANPNP---SLGPTLSVPHTNYHQAMASAFPHM 289
                     + T HQDL+ +D       NPNP   SLGPTL      +H A +   PHM
Sbjct: 279 ----------SPTHHQDLSLDDSHNGTSQNPNPCPSSLGPTLPP----FHPAPS---PHM 321

Query: 290 SATALLQKAAQMGATMSSSKASTATGNSSSSSSPAHHAALTRPHQQPPPPQQAHVSATPE 349
           SATALLQKAAQMGATM S K ST T  ++++++ A    + R HQ      Q H+S    
Sbjct: 322 SATALLQKAAQMGATM-SGKHSTTTAAAAAAAASASPQPMVRVHQH----SQGHMSEFSG 376

Query: 350 HPA-----GNNKTKTTTGFGLNLSSREGVVHGLTPFGTKTSGGGSSGPFIQEMLMNTSFS 404
           H +     G N T  TTG           V G+           S    + +M+ + S  
Sbjct: 377 HVSAFAAAGANATNITTG---------PAVSGVHHHHENQHHQAS---LLHDMMNSLSSG 424

Query: 405 SGYAAASPFDDAL-TFGGVFNSKKEPHLNHS-FNESSSLSRTSGINDHGEEMTRDFLGLR 462
           +G+  A+   +A  +   + N+ K+   N + FN+S   +   G N  GE +TRDFLGLR
Sbjct: 425 TGFEGAAFELEAFGSLPNILNNAKKGSNNSTHFNKSG--NDDGGAN--GEGLTRDFLGLR 480

Query: 463 ALSQTDILNIAGLGNCIDTRSSHEQQLNHS-------QKPWQG 498
           ALS +DILNIAG+GNC+ + ++       +       QKPWQG
Sbjct: 481 ALSHSDILNIAGIGNCVSSANAAAAAAAVANTASRDHQKPWQG 523

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	498
TAIR|locus:2051698	602	IDD5 "AT2G02070" [Arabidopsis	0.307	0.254	0.826	3.2e-88
TAIR|locus:2205672	455	IDD7 "AT1G55110" [Arabidopsis	0.453	0.496	0.634	1.7e-86
TAIR|locus:2173624	500	IDD1 "AT5G66730" [Arabidopsis	0.279	0.278	0.899	1.2e-81
TAIR|locus:2024193	506	MGP "AT1G03840" [Arabidopsis t	0.317	0.312	0.796	2.5e-81
TAIR|locus:2101739	452	IDD2 "AT3G50700" [Arabidopsis	0.453	0.5	0.595	4.1e-79
TAIR|locus:2132397	402	IDD12 "AT4G02670" [Arabidopsis	0.309	0.383	0.793	3e-75
TAIR|locus:2143543	503	JKD "AT5G03150" [Arabidopsis t	0.582	0.576	0.509	3.2e-75
TAIR|locus:2078262	446	AT3G45260 "AT3G45260" [Arabido	0.594	0.663	0.517	4.5e-75
TAIR|locus:2051688	516	IDD4 "indeterminate(ID)-domain	0.598	0.577	0.493	3.1e-74
TAIR|locus:2167608	466	NUC "AT5G44160" [Arabidopsis t	0.572	0.611	0.522	5.1e-74

TAIR|locus:2051698 IDD5 "AT2G02070" [Arabidopsis thaliana (taxid:3702)]

 Score = 746 (267.7 bits), Expect = 3.2e-88, Sum P(4) = 3.2e-88
 Identities = 129/156 (82%), Positives = 144/156 (92%)

Query:     1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPS 60
             MATNRF+CE+CNKGFQR+QNLQLHRRGHNLPWKLKQ+++KE+++KVY+CPEP+CVHHDPS
Sbjct:    76 MATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPSCVHHDPS 135

Query:    61 RALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRR 120
             RALGDLTGIKKH+ RKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGT+EYRCDCGTLFSRR
Sbjct:   136 RALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTKEYRCDCGTLFSRR 195

Query:   121 DSFITHRAFCDALAEESTRAITGTNPILSSSSHHQP 156
             DSFITHRAFCDALA+ES R  T    + S  SHH P
Sbjct:   196 DSFITHRAFCDALAQESARHPTS---LTSLPSHHFP 228

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0006417 "regulation of translation" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2205672 IDD7 "AT1G55110" [Arabidopsis thaliana (taxid:3702)]

 Score = 772 (276.8 bits), Expect = 1.7e-86, Sum P(2) = 1.7e-86
 Identities = 153/241 (63%), Positives = 176/241 (73%)

Query:     1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEI-RKKVYVCPEPNCVHHDP 59
             MATNRF+CE+CNKGFQRDQNLQLH+RGHNLPWKLKQR++K++ RKKVYVCPEP CVHH P
Sbjct:    87 MATNRFICEVCNKGFQRDQNLQLHKRGHNLPWKLKQRSNKDVVRKKVYVCPEPGCVHHHP 146

Query:    60 SRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSR 119
             SRALGDLTGIKKHF RKHGEKKWKC+KCSK+YAVQSDWKAH+KTCGT+EY+CDCGTLFSR
Sbjct:   147 SRALGDLTGIKKHFFRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTKEYKCDCGTLFSR 206

Query:   120 RDSFITHRAFCDALAEESTRAITGTNPILSSSS------HHQPGIVAGASSHVNLQIPQF 173
             RDSFITHRAFCDALAEES RA+   NPI+  +S      HHQ     G SS     I   
Sbjct:   207 RDSFITHRAFCDALAEESARAMP--NPIMIQASNSPHHHHHQTQQNIGFSSSSQNIISNS 264

Query:   174 NPQDFSAFSLKKEQQSYSLRQEMPPWLGSQQPSILGSAVPGLGQPPSSSHTVDHLSSPSS 233
             N        +K+E+  +   Q +PPWL S  P+  G+    L  P +SS      S P  
Sbjct:   265 NLHG----PMKQEESQHHY-QNIPPWLISSNPNPNGNN-GNLFPPVASSVNTGRSSFPHP 318

Query:   234 S 234
             S
Sbjct:   319 S 319

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0009617 "response to bacterium" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

TAIR|locus:2173624 IDD1 "AT5G66730" [Arabidopsis thaliana (taxid:3702)]

 Score = 730 (262.0 bits), Expect = 1.2e-81, Sum P(3) = 1.2e-81
 Identities = 125/139 (89%), Positives = 134/139 (96%)

Query:     1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPS 60
             MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL+QR++KE+RKKVYVCP   CVHHDPS
Sbjct:    56 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTKEVRKKVYVCPVSGCVHHDPS 115

Query:    61 RALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRR 120
             RALGDLTGIKKHFCRKHGEKKWKC+KCSK+YAVQSDWKAHSK CGT+EY+CDCGTLFSRR
Sbjct:   116 RALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTKEYKCDCGTLFSRR 175

Query:   121 DSFITHRAFCDALAEESTR 139
             DSFITHRAFCDALAEES +
Sbjct:   176 DSFITHRAFCDALAEESAK 194

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0009937 "regulation of gibberellic acid mediated signaling pathway" evidence=IMP

GO:0010029 "regulation of seed germination" evidence=IMP

GO:0010431 "seed maturation" evidence=IMP

TAIR|locus:2024193 MGP "AT1G03840" [Arabidopsis thaliana (taxid:3702)]

 Score = 739 (265.2 bits), Expect = 2.5e-81, Sum P(3) = 2.5e-81
 Identities = 133/167 (79%), Positives = 148/167 (88%)

Query:     1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPS 60
             MATNRF+CEIC KGFQRDQNLQLHRRGHNLPWKLKQRTSKE+RK+VYVCPE +CVHH P+
Sbjct:    65 MATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSCVHHHPT 124

Query:    61 RALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRR 120
             RALGDLTGIKKHFCRKHGEKKWKC+KC+KRYAVQSDWKAHSKTCGTREYRCDCGT+FSRR
Sbjct:   125 RALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRR 184

Query:   121 DSFITHRAFCDALAEESTRAITGTNPILSSSSHHQPGIVAGASSHVN 167
             DSFITHRAFCDALAEE+ R        L+++SH +    A A S++N
Sbjct:   185 DSFITHRAFCDALAEETAR--------LNAASHLK-SFAATAGSNLN 222

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2101739 IDD2 "AT3G50700" [Arabidopsis thaliana (taxid:3702)]

 Score = 744 (267.0 bits), Expect = 4.1e-79, Sum P(2) = 4.1e-79
 Identities = 147/247 (59%), Positives = 179/247 (72%)

Query:     1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPS 60
             +ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL+Q+++KE++KKVYVCPE +CVHHDPS
Sbjct:    58 LATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQKSNKEVKKKVYVCPEVSCVHHDPS 117

Query:    61 RALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRR 120
             RALGDLTGIKKHFCRKHGEKKWKCDKCSK+YAVQSDWKAHSK CGT+EY+CDCGTLFSRR
Sbjct:   118 RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTKEYKCDCGTLFSRR 177

Query:   121 DSFITHRAFCDALAEESTRAITGTNPILSSSSHHQPGIVAGASSHVNLQIPQFNPQDFSA 180
             DSFITHRAFCDALAEE+ R+        S S    P I+   +   N  +P   P D  +
Sbjct:   178 DSFITHRAFCDALAEENARSHH------SQSKKQNPEILTRKNPVPN-PVPA--PVDTES 228

Query:   181 FSLKKEQQSYSLRQ----EMPPWLGSQQPS------ILGSAV-PGLGQPPSSSHTVDHLS 229
               +K    + +++Q    + PP +  + P       +  + V  GL +  S+S ++   S
Sbjct:   229 AKIKSSS-TLTIKQSESPKTPPEIVQEAPKPTSLNVVTSNGVFAGLFESSSASPSIYTTS 287

Query:   230 SPSSSIF 236
             S S S+F
Sbjct:   288 SSSKSLF 294

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2132397 IDD12 "AT4G02670" [Arabidopsis thaliana (taxid:3702)]

 Score = 707 (253.9 bits), Expect = 3.0e-75, Sum P(3) = 3.0e-75
 Identities = 127/160 (79%), Positives = 138/160 (86%)

Query:     1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEI-RKKVYVCPEPNCVHHDP 59
             +ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQ+ +KE  +KKVYVCPE NC HH P
Sbjct:    77 LATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQKNTKEQQKKKVYVCPETNCAHHHP 136

Query:    60 SRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSR 119
             SRALGDLTGIKKHFCRKHGEKKWKC+KCSK YAVQSDWKAH+K CGTR+YRCDCGTLFSR
Sbjct:   137 SRALGDLTGIKKHFCRKHGEKKWKCEKCSKFYAVQSDWKAHTKICGTRDYRCDCGTLFSR 196

Query:   120 RDSFITHRAFCDALAEESTRAITG-----TNPILSSSSHH 154
             +D+FITHRAFCDALAEES R  +      TNP  +   HH
Sbjct:   197 KDTFITHRAFCDALAEESARLHSTSSSNLTNPNPNFQGHH 236

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2143543 JKD "AT5G03150" [Arabidopsis thaliana (taxid:3702)]

 Score = 735 (263.8 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
 Identities = 162/318 (50%), Positives = 190/318 (59%)

Query:     1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKE-IRKKVYVCPEPNCVHHDP 59
             MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQR+ +E I+KKVY+CP   CVHHD 
Sbjct:    77 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSKQEVIKKKVYICPIKTCVHHDA 136

Query:    60 SRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSR 119
             SRALGDLTGIKKH+ RKHGEKKWKC+KCSK+YAVQSDWKAH+KTCGTREY+CDCGTLFSR
Sbjct:   137 SRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTREYKCDCGTLFSR 196

Query:   120 RDSFITHRAFCDALAEESTR--AITGTNPILSSSS---------HHQPGIVAGASSHVNL 168
             +DSFITHRAFCDAL EE  R  +++  NP++S+++          + P +  G   H  +
Sbjct:   197 KDSFITHRAFCDALTEEGARMSSLSNNNPVISTTNLNFGNESNVMNNPNLPHGFV-HRGV 255

Query:   169 QIPQFNPQDFSAFSLKKEQQSYSLR----QEMPPWLGSQQPSILGSAVPGLGQPPSSSHT 224
               P  N    S F L       ++      EM     +    +  S+   L  P  S H 
Sbjct:   256 HHPDINAA-ISQFGLGFGHDLSAMHAQGLSEMVQMASTGNHHLFPSSSSSL--PDFSGH- 311

Query:   225 VDHLSSPSSSIFNTRXXXXXXXXXXXXXXXXRNDHPANPNPSLGPTLSVPHTNYHQAMAS 284
                   P +S   T                    H    + S  P  S    N      S
Sbjct:   312 -HQFQIPMTS---TNPSLTLSSSSTSQQTSASLQHQTLKDSSFSPLFSSSSENKQNKPLS 367

Query:   285 AFPHMSATALLQKAAQMG 302
               P MSATALLQKAAQMG
Sbjct:   368 --P-MSATALLQKAAQMG 382

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0010075 "regulation of meristem growth" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0048364 "root development" evidence=IMP

GO:0051302 "regulation of cell division" evidence=IMP

GO:0045604 "regulation of epidermal cell differentiation" evidence=IMP

GO:0048527 "lateral root development" evidence=RCA

GO:0048589 "developmental growth" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

TAIR|locus:2078262 AT3G45260 "AT3G45260" [Arabidopsis thaliana (taxid:3702)]

 Score = 757 (271.5 bits), Expect = 4.5e-75, P = 4.5e-75
 Identities = 160/309 (51%), Positives = 192/309 (62%)

Query:     1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKE-IRKKVYVCPEPNCVHHDP 59
             M TNRF+CE+CNKGF+RDQNLQLHRRGHNLPWKLKQRT+KE ++KKVY+CPE  CVHHDP
Sbjct:    63 MTTNRFICEVCNKGFKRDQNLQLHRRGHNLPWKLKQRTNKEQVKKKVYICPEKTCVHHDP 122

Query:    60 SRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSR 119
             +RALGDLTGIKKHF RKHGEKKWKCDKCSK+YAV SDWKAHSK CGT+EYRCDCGTLFSR
Sbjct:   123 ARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVMSDWKAHSKICGTKEYRCDCGTLFSR 182

Query:   120 RDSFITHRAFCDALAEESTRAITGTNPILSSSSHHQPGIVAGASSHVNLQIPQFNPQDFS 179
             +DSFITHRAFCDALAEES R ++   P  +  ++     V   + + N Q  Q N     
Sbjct:   183 KDSFITHRAFCDALAEESARFVS-VPPAPAYLNNALDVEVNHGNINQNHQQRQLNTT--- 238

Query:   180 AFSLKKEQQSYSLRQEMPPWLGSQQPS--ILGSAVPGLGQPPSSSHTVDHLSSPSSS--I 235
               S + +Q  ++  +    +LG   P+     S+ P       S   + HL   SS   +
Sbjct:   239 --SSQLDQPGFNTNRNNIAFLGQTLPTNVFASSSSPSPRSASDSLQNLWHLQGQSSHQWL 296

Query:   236 FNTRXXXXXXXXXXXXXXXXRNDHPAN--PNPSLGPTLSVPHTNYHQAMASAFPHMSATA 293
              N                        N   N SL  + +  +TN +         MSATA
Sbjct:   297 LNENNNNNNNILQRGISKNQEEHEMKNVISNGSLFSSEARNNTNNYNQNGGQIASMSATA 356

Query:   294 LLQKAAQMG 302
             LLQKAAQMG
Sbjct:   357 LLQKAAQMG 365

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2051688 IDD4 "indeterminate(ID)-domain 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
 Identities = 156/316 (49%), Positives = 201/316 (63%)

Query:     1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPS 60
             MATNRF+C++CNKGFQR+QNLQLHRRGHNLPWKLKQ+++KE+++KVY+CPEP CVHHDPS
Sbjct:    78 MATNRFICDVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPTCVHHDPS 137

Query:    61 RALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRR 120
             RALGDLTGIKKH+ RKHGEKKWKC+KCSKRYAVQSDWKAHSKTCGT+EYRCDCGT+FSRR
Sbjct:   138 RALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTKEYRCDCGTIFSRR 197

Query:   121 DSFITHRAFCDALAEESTR--AITGTNPILSSSSHHQPGI---VAGAS--SHVNLQI-PQ 172
             DS+ITHRAFCDAL +E+ R   ++ T+   +SS     GI   + G S  SH +L   P 
Sbjct:   198 DSYITHRAFCDALIQETARNPTVSFTSMTAASSGVGSGGIYGRLGGGSALSHHHLSDHPN 257

Query:   173 FNPQDFSAFSLK----KEQQSYSLRQEMPPWL--GSQQPSILGSAVPGLGQPPSSSHTVD 226
             F       ++L       ++ +  +   P +L   +    +L +      Q   + H + 
Sbjct:   258 FGFNPLVGYNLNIASSDNRRDFIPQSSNPNFLIQSASSQGMLNTTPNNNNQSFMNQHGLI 317

Query:   227 HLSSPSSSIFNTRXXXXXXXXXXXXXXXXRNDHPANPNPSLGPTLSVPHTNYHQAMASAF 286
                 P  +I N +                   +     PSL  T  + H  + +   +A 
Sbjct:   318 QFD-PVDNI-NLKSSGTNNSFFNLGFFQENTKNSETSLPSLYSTDVLVH--HREENLNAG 373

Query:   287 PHMSATALLQKAAQMG 302
              ++SATALLQKA QMG
Sbjct:   374 SNVSATALLQKATQMG 389

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2167608 NUC "AT5G44160" [Arabidopsis thaliana (taxid:3702)]

 Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
 Identities = 160/306 (52%), Positives = 187/306 (61%)

Query:     1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPS 60
             MATNRF+CE+C KGFQRDQNLQLHRRGHNLPWKLKQRTSKE+RK+VYVCPE  CVHH  S
Sbjct:    61 MATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCVHHHSS 120

Query:    61 RALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRR 120
             RALGDLTGIKKHFCRKHGEKKW C+KC+KRYAVQSDWKAHSKTCGTREYRCDCGT+FSRR
Sbjct:   121 RALGDLTGIKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRR 180

Query:   121 DSFITHRAFCDALAEESTRAITGTNPILSSSSHHQPGIVAGASSHVNLQ----IPQFNPQ 176
             DSFITHRAFCDALAEE+ +        +++ SH      AGA   VNL     +  F P 
Sbjct:   181 DSFITHRAFCDALAEETAK--------INAVSHLNGLAAAGAPGSVNLNYQYLMGTFIPP 232

Query:   177 DFSAFSLKKEQQSYSLRQEMPPWLGSQQPSILGSAVPGLGQPPSSSHTVDHLSSPSSSIF 236
                 F  + +       Q   P   S     +G  +      P       +  + S+ I 
Sbjct:   233 -LQPFVPQPQTNPNHHHQHFQPPTSSSLSLWMGQDIAPPQPQPDYDWVFGNAKAASACID 291

Query:   237 NTRXXXXXXXXXXXXXXXXRNDHPANPNPSLGPTLSVPHTNYHQAMASAFPHMSATALLQ 296
             N                       A   PSL  +    + N     A++  +MSATALLQ
Sbjct:   292 NNNTHDEQITQNANASLTTTTTLSA---PSLFSSDQPQNAN-----ANSNVNMSATALLQ 343

Query:   297 KAAQMG 302
             KAA++G
Sbjct:   344 KAAEIG 349

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0010260 "organ senescence" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

GO:0048573 "photoperiodism, flowering" evidence=IMP

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	498
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.9
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.86
KOG3576	267	consensus Ovo and related transcription factors [T	99.67
KOG3608	467	consensus Zn finger proteins [General function pre	99.67
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.58
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.58
KOG3576	267	consensus Ovo and related transcription factors [T	99.51
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.44
KOG3608	467	consensus Zn finger proteins [General function pre	99.42
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.36
PLN03086	567	PRLI-interacting factor K; Provisional	99.12
PLN03086	567	PRLI-interacting factor K; Provisional	98.93
PHA00733	128	hypothetical protein	98.82
PHA00733	128	hypothetical protein	98.81
KOG3993	500	consensus Transcription factor (contains Zn finger	98.69
PHA02768	55	hypothetical protein; Provisional	98.37
PHA02768	55	hypothetical protein; Provisional	98.3
KOG3993	500	consensus Transcription factor (contains Zn finger	98.17
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.16
PHA00732	79	hypothetical protein	97.71
PHA00616	44	hypothetical protein	97.7
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.63
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.57
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	97.4
PHA00616	44	hypothetical protein	97.39
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.39
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.37
PHA00732	79	hypothetical protein	97.35
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.1
KOG1146	1406	consensus Homeobox protein [General function predi	96.99
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.97
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.84
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.76
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	96.72
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	96.6
COG5048	467	FOG: Zn-finger [General function prediction only]	96.55
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.32
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.06
smart00355	26	ZnF_C2H2 zinc finger.	95.95
KOG1146	1406	consensus Homeobox protein [General function predi	95.74
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	95.67
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	94.98
PRK04860	160	hypothetical protein; Provisional	94.82
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	94.66
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	94.27
PRK04860	160	hypothetical protein; Provisional	93.88
smart00355	26	ZnF_C2H2 zinc finger.	93.72
COG5236	493	Uncharacterized conserved protein, contains RING Z	93.62
COG5048	467	FOG: Zn-finger [General function prediction only]	92.5
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	92.47
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	92.44
KOG2482	423	consensus Predicted C2H2-type Zn-finger protein [T	92.11
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	91.72
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	91.7
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	90.63
KOG4173	253	consensus Alpha-SNAP protein [Intracellular traffi	90.23
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	88.64
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	85.41
COG5236	493	Uncharacterized conserved protein, contains RING Z	84.47
KOG2932	389	consensus E3 ubiquitin ligase involved in ubiquiti	84.11
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	83.82
KOG2893	341	consensus Zn finger protein [General function pred	82.83
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	82.07
KOG2482	423	consensus Predicted C2H2-type Zn-finger protein [T	81.9
KOG2785	390	consensus C2H2-type Zn-finger protein [General fun	81.4
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	80.63

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.90  E-value=1e-24  Score=213.10  Aligned_cols=135  Identities=19%  Similarity=0.407  Sum_probs=125.2

Q ss_pred             CCccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCccc
Q 010863            3 TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKW   82 (498)
Q Consensus         3 ekpy~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~   82 (498)
                      ..+|+|.+|||.|.+.++|.+|+.+|..          ....+.+.|++|       +|.|.+...|+.|+++|+  -++
T Consensus       128 ~~r~~c~eCgk~ysT~snLsrHkQ~H~~----------~~s~ka~~C~~C-------~K~YvSmpALkMHirTH~--l~c  188 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSNLSRHKQTHRS----------LDSKKAFSCKYC-------GKVYVSMPALKMHIRTHT--LPC  188 (279)
T ss_pred             CCceeccccccccccccccchhhccccc----------ccccccccCCCC-------CceeeehHHHhhHhhccC--CCc
Confidence            4579999999999999999999999961          114788999999       999999999999999998  579


Q ss_pred             ccCcCCccccchhHHHHHHhh-hCCCceecC-CCCccCChHHHHHHHHHhhhccccccccccCCCCCCCCCCCCCCCCCC
Q 010863           83 KCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTLFSRRDSFITHRAFCDALAEESTRAITGTNPILSSSSHHQPGIVA  160 (498)
Q Consensus        83 ~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-Cgk~F~~~s~L~~H~~~h~~~~~~s~r~h~~~kp~~C~~C~~sf~~~s  160 (498)
                      +|.+|||.|.+.+.|+-|+|+ +|||||.|. |+|.|..+++|+.|+           .+|.+.|+|.|..|+|+|...+
T Consensus       189 ~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHm-----------QTHS~~K~~qC~~C~KsFsl~S  257 (279)
T KOG2462|consen  189 ECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHM-----------QTHSDVKKHQCPRCGKSFALKS  257 (279)
T ss_pred             ccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHH-----------HhhcCCccccCcchhhHHHHHH
Confidence            999999999999999999999 899999999 999999999999999           7888899999999999999999


Q ss_pred             ccccccc
Q 010863          161 GASSHVN  167 (498)
Q Consensus       161 ~l~sH~~  167 (498)
                      -|+.|.-
T Consensus       258 yLnKH~E  264 (279)
T KOG2462|consen  258 YLNKHSE  264 (279)
T ss_pred             HHHHhhh
Confidence            9988864

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.86  E-value=1.8e-22  Score=197.39  Aligned_cols=103  Identities=26%  Similarity=0.531  Sum_probs=99.2

Q ss_pred             CCccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCccc
Q 010863            3 TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKW   82 (498)
Q Consensus         3 ekpy~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~   82 (498)
                      .|-+.|++|+|.|...-.|+.|+|+|.               -+++|.+|       ||.|.+.+.|+.|+|+|||||||
T Consensus       159 ~ka~~C~~C~K~YvSmpALkMHirTH~---------------l~c~C~iC-------GKaFSRPWLLQGHiRTHTGEKPF  216 (279)
T KOG2462|consen  159 KKAFSCKYCGKVYVSMPALKMHIRTHT---------------LPCECGIC-------GKAFSRPWLLQGHIRTHTGEKPF  216 (279)
T ss_pred             cccccCCCCCceeeehHHHhhHhhccC---------------CCcccccc-------cccccchHHhhcccccccCCCCc
Confidence            567999999999999999999999996               67899999       99999999999999999999999


Q ss_pred             ccCcCCccccchhHHHHHHhh-hCCCceecC-CCCccCChHHHHHHH
Q 010863           83 KCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTLFSRRDSFITHR  127 (498)
Q Consensus        83 ~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-Cgk~F~~~s~L~~H~  127 (498)
                      .|..|+|.|..+++|+.||++ .+.|.|.|. |+|.|.+++.|.+|.
T Consensus       217 ~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~  263 (279)
T KOG2462|consen  217 SCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHS  263 (279)
T ss_pred             cCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhh
Confidence            999999999999999999999 688999999 999999999999998

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.67  E-value=1.9e-17  Score=155.32  Aligned_cols=110  Identities=25%  Similarity=0.550  Sum_probs=98.2

Q ss_pred             CCccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCccc
Q 010863            3 TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKW   82 (498)
Q Consensus         3 ekpy~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~   82 (498)
                      ...|.|.+|+|.|....-|.+|++.|.             ..|.|.|..|       +|.|.+...|++|+|+|+|.+||
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~-------------~vkr~lct~c-------gkgfndtfdlkrh~rthtgvrpy  174 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHS-------------DVKRHLCTFC-------GKGFNDTFDLKRHTRTHTGVRPY  174 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhcc-------------HHHHHHHhhc-------cCcccchhhhhhhhccccCcccc
Confidence            456899999999999999999999998             7889999999       89999999999999999999999


Q ss_pred             ccCcCCccccchhHHHHHHhh-hCC-----------CceecC-CCCccCChHHHHHHHHHhhh
Q 010863           83 KCDKCSKRYAVQSDWKAHSKT-CGT-----------REYRCD-CGTLFSRRDSFITHRAFCDA  132 (498)
Q Consensus        83 ~C~~CgK~F~~~s~L~~H~r~-hge-----------kpy~C~-Cgk~F~~~s~L~~H~~~h~~  132 (498)
                      +|..|+|.|..+-.|..|.+. ||.           |.|.|+ ||..-.+...+..|++.|+.
T Consensus       175 kc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp  237 (267)
T KOG3576|consen  175 KCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHP  237 (267)
T ss_pred             chhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCC
Confidence            999999999999999999887 763           678888 88888888888888876653

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.67  E-value=2.9e-17  Score=164.60  Aligned_cols=175  Identities=17%  Similarity=0.277  Sum_probs=139.6

Q ss_pred             CCCccccCccCcccCChHHHHHHHHhcC----CCcccccc---------ccccc--cCcceeCCCCCCCCCCCCCccCCh
Q 010863            2 ATNRFVCEICNKGFQRDQNLQLHRRGHN----LPWKLKQR---------TSKEI--RKKVYVCPEPNCVHHDPSRALGDL   66 (498)
Q Consensus         2 gekpy~C~~CgK~F~~~s~L~~H~r~H~----~p~~c~~~---------~~~~~--~~k~y~C~~C~C~~~~~~k~F~~~   66 (498)
                      +||-..|+.||..|.++..|..|+|.-+    .+|.|+..         .+.|+  ....|+|+.|       +-.....
T Consensus       204 ~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~ykCplC-------dmtc~~~  276 (467)
T KOG3608|consen  204 NEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVNCYKCPLC-------DMTCSSA  276 (467)
T ss_pred             CCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhccccccc-------ccCCCCh
Confidence            5666667777777777777777766544    44555431         11121  2367999999       8899999


Q ss_pred             hhHhhhhh-hccCCcccccCcCCccccchhHHHHHHhhhCCCceecC---CCCccCChHHHHHHHHHhhhcccccccccc
Q 010863           67 TGIKKHFC-RKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCD---CGTLFSRRDSFITHRAFCDALAEESTRAIT  142 (498)
Q Consensus        67 s~Lk~H~r-~Htgekp~~C~~CgK~F~~~s~L~~H~r~hgekpy~C~---Cgk~F~~~s~L~~H~~~h~~~~~~s~r~h~  142 (498)
                      +.|.+|++ .|..+|||+|+.|++.|.+.++|.+|..+|.+-.|.|+   |..+|+....+++|++.++..        .
T Consensus       277 ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg--------~  348 (467)
T KOG3608|consen  277 SSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHSKTVYQCEHPDCHYSVRTYTQMRRHFLEVHEG--------N  348 (467)
T ss_pred             HHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhccccceecCCCCCcHHHHHHHHHHHHHHHhccC--------C
Confidence            99999988 57889999999999999999999999999888889998   999999999999999654421        1


Q ss_pred             CCCCCCCCCCCCCCCCCCcccccccccCCCCCCCccccccchhhhhccc
Q 010863          143 GTNPILSSSSHHQPGIVAGASSHVNLQIPQFNPQDFSAFSLKKEQQSYS  191 (498)
Q Consensus       143 ~~kp~~C~~C~~sf~~~s~l~sH~~~~~p~~~~~~~~~~~~k~eqq~~~  191 (498)
                      .+-+|.|-.|.+.|++-.+|..|++..+-...+....+|.||..+++|-
T Consensus       349 np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f~~PsGh~RFtYk~~edG~m  397 (467)
T KOG3608|consen  349 NPILYACHCCDRFFTSGKSLSAHLMKKHGFRLPSGHKRFTYKVDEDGFM  397 (467)
T ss_pred             CCCceeeecchhhhccchhHHHHHHHhhcccCCCCCCceeeeeccCcee
Confidence            3567999999999999999999998887777789999999999988643

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.58  E-value=5.9e-16  Score=168.96  Aligned_cols=82  Identities=17%  Similarity=0.388  Sum_probs=63.8

Q ss_pred             cccCcCCccccchhHHHHHHhh-hCCCceecC-CCCccCChHHHHHHHHHhhhccccccccccCCCCCCCC---CCCCCC
Q 010863           82 WKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTLFSRRDSFITHRAFCDALAEESTRAITGTNPILSS---SSHHQP  156 (498)
Q Consensus        82 ~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-Cgk~F~~~s~L~~H~~~h~~~~~~s~r~h~~~kp~~C~---~C~~sf  156 (498)
                      ..|-+|.+...-++.|+.|.|+ +|||||+|+ |++.|.++.+|+.|+-+|.+       .+.-.-.+.|+   +|.+.|
T Consensus       606 NqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka-------~p~~R~q~ScP~~~ic~~kf  678 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKA-------KPPARVQFSCPSTFICQKKF  678 (958)
T ss_pred             cceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhccccccc-------CccccccccCCchhhhcccc
Confidence            4688888888888888888888 688888888 88888888888888855532       12223468888   888888


Q ss_pred             CCCCcccccccccC
Q 010863          157 GIVAGASSHVNLQI  170 (498)
Q Consensus       157 ~~~s~l~sH~~~~~  170 (498)
                      ...-.+..|+++|.
T Consensus       679 tn~V~lpQhIriH~  692 (958)
T KOG1074|consen  679 TNAVTLPQHIRIHL  692 (958)
T ss_pred             cccccccceEEeec
Confidence            88888888888876

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.58  E-value=1e-15  Score=164.65  Aligned_cols=167  Identities=19%  Similarity=0.349  Sum_probs=124.8

Q ss_pred             cccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhcc--------
Q 010863            6 FVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKH--------   77 (498)
Q Consensus         6 y~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Ht--------   77 (498)
                      ..|++|.+.|++...|+.|++..+           +..+..|.|..|       .+.|.++..|.+||.+|.        
T Consensus       211 ltcpycdrgykrltslkeHikyrh-----------ekne~nfsC~lC-------sytFAyRtQLErhm~~hkpg~dqa~s  272 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRH-----------EKNEPNFSCMLC-------SYTFAYRTQLERHMQLHKPGGDQAIS  272 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHH-----------hhCCCCCcchhh-------hhhhhhHHHHHHHHHhhcCCCccccc
Confidence            579999999999999999998765           125667999999       899999999999999885        


Q ss_pred             -----CCcccccCcCCccccchhHHHHHHhh-hCCCceecC-CCCccCChHHHHHHHH--HhhhccccccccccCCCCCC
Q 010863           78 -----GEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTLFSRRDSFITHRA--FCDALAEESTRAITGTNPIL  148 (498)
Q Consensus        78 -----gekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-Cgk~F~~~s~L~~H~~--~h~~~~~~s~r~h~~~kp~~  148 (498)
                           ..|.|+|.+|+|.|+.+.+|+.|+|+ .|||||.|+ |+|+|+...++..||.  .|-.+.-...|....-|...
T Consensus       273 ltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSSKKCIsli~vngr~R~~lKt~~  352 (1007)
T KOG3623|consen  273 LTQSALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSSKKCISLILVNGRNRALLKTLE  352 (1007)
T ss_pred             ccchhhhccccccccchhhhhHHHHHhhheeecCCCCcCCcccccccccCCcccccccccchhhhhcccCcchhhhhhcc
Confidence                 24789999999999999999999999 799999999 9999999999999984  23222222334444455566


Q ss_pred             CCCCCCCCCCCCcccccccccCCCCCCCccccccchhhhhcc
Q 010863          149 SSSSHHQPGIVAGASSHVNLQIPQFNPQDFSAFSLKKEQQSY  190 (498)
Q Consensus       149 C~~C~~sf~~~s~l~sH~~~~~p~~~~~~~~~~~~k~eqq~~  190 (498)
                      |+.-..+.........+.+..++......+....++-+...+
T Consensus       353 ~Sp~saSsSp~~s~~pq~r~klen~~slql~~~qistepsda  394 (1007)
T KOG3623|consen  353 KSPGSASSSPRRSPSPQGRGKLENQPSLQLLPHQISTEPSDA  394 (1007)
T ss_pred             cCCcccCCCCCCCCChhHhhhccCchhhccCCcccccccchh
Confidence            655555545555555666655554333333444455555444

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.51  E-value=1.8e-15  Score=142.05  Aligned_cols=123  Identities=19%  Similarity=0.324  Sum_probs=108.6

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-CCCccCCh
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTLFSRR  120 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-Cgk~F~~~  120 (498)
                      +...|.|.+|       +|.|.....|.+|++.|...|.|.|..|||.|...-+|++|+|+ +|.+||+|. |+|.|..+
T Consensus       114 d~d~ftCrvC-------gK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqr  186 (267)
T KOG3576|consen  114 DQDSFTCRVC-------GKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQR  186 (267)
T ss_pred             CCCeeeeehh-------hhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhh
Confidence            4567999999       89999999999999999999999999999999999999999999 899999999 99999999


Q ss_pred             HHHHHHHHHhhhccccccccccCCCCCCCCCCCCCCCCCCcccccccccCCC
Q 010863          121 DSFITHRAFCDALAEESTRAITGTNPILSSSSHHQPGIVAGASSHVNLQIPQ  172 (498)
Q Consensus       121 s~L~~H~~~h~~~~~~s~r~h~~~kp~~C~~C~~sf~~~s~l~sH~~~~~p~  172 (498)
                      -+|..|.+..|+.....+-.-..+|-|.|+.|+.+.......-.|++.++|.
T Consensus       187 csleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~  238 (267)
T KOG3576|consen  187 CSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPF  238 (267)
T ss_pred             ccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCC
Confidence            9999999877664433333333478899999999998888999999988753

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.44  E-value=2.2e-14  Score=156.89  Aligned_cols=81  Identities=22%  Similarity=0.450  Sum_probs=68.5

Q ss_pred             CCccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCC---
Q 010863            3 TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGE---   79 (498)
Q Consensus         3 ekpy~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htge---   79 (498)
                      +.|-.|-+|-++...++.|+.|+|+|+             +|++|+|.+|       +|+|.++.+|+.||.+|...   
T Consensus       603 TdPNqCiiC~rVlSC~saLqmHyrtHt-------------GERPFkCKiC-------gRAFtTkGNLkaH~~vHka~p~~  662 (958)
T KOG1074|consen  603 TDPNQCIICLRVLSCPSALQMHYRTHT-------------GERPFKCKIC-------GRAFTTKGNLKAHMSVHKAKPPA  662 (958)
T ss_pred             CCccceeeeeecccchhhhhhhhhccc-------------CcCccccccc-------cchhccccchhhcccccccCccc
Confidence            347789999999999999999999999             9999999999       89999999999999988643   


Q ss_pred             -cccccC---cCCccccchhHHHHHHhh
Q 010863           80 -KKWKCD---KCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        80 -kp~~C~---~CgK~F~~~s~L~~H~r~  103 (498)
                       -.+.|+   +|-+.|...-.|..|+++
T Consensus       663 R~q~ScP~~~ic~~kftn~V~lpQhIri  690 (958)
T KOG1074|consen  663 RVQFSCPSTFICQKKFTNAVTLPQHIRI  690 (958)
T ss_pred             cccccCCchhhhcccccccccccceEEe
Confidence             236677   788877777777766665

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.42  E-value=3e-14  Score=143.18  Aligned_cols=144  Identities=18%  Similarity=0.329  Sum_probs=83.6

Q ss_pred             cccC--ccCcccCChHHHHHHHHhcC--CCccccc---------------cccccccCcceeCCCCCCCCCCCCCccCCh
Q 010863            6 FVCE--ICNKGFQRDQNLQLHRRGHN--LPWKLKQ---------------RTSKEIRKKVYVCPEPNCVHHDPSRALGDL   66 (498)
Q Consensus         6 y~C~--~CgK~F~~~s~L~~H~r~H~--~p~~c~~---------------~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~   66 (498)
                      +.|.  -|-+.|.++.+|++|+|.|.  +...|..               +....+...+|.|..|       .|.|.+.
T Consensus       178 ~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C-------~KrFaTe  250 (467)
T KOG3608|consen  178 TMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQC-------FKRFATE  250 (467)
T ss_pred             eeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHH-------HHHHhHH
Confidence            4454  59999999999999999998  2222221               1111123344555555       5555555


Q ss_pred             hhHhhhhhhccCCcccccCcCCccccchhHHHHHHhh-h-CCCceecC-CCCccCChHHHHHHHHHhhhccccccccccC
Q 010863           67 TGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-C-GTREYRCD-CGTLFSRRDSFITHRAFCDALAEESTRAITG  143 (498)
Q Consensus        67 s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-h-gekpy~C~-Cgk~F~~~s~L~~H~~~h~~~~~~s~r~h~~  143 (498)
                      ..|+.|++.|.  .-|+|+.|+.+....+.|.+|++. | ..|||+|+ |.+.|.+.++|.+|.           .+|+ 
T Consensus       251 klL~~Hv~rHv--n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~-----------~~HS-  316 (467)
T KOG3608|consen  251 KLLKSHVVRHV--NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHV-----------QVHS-  316 (467)
T ss_pred             HHHHHHHHHhh--hcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHH-----------Hhcc-
Confidence            55555555553  235666666666666666666665 3 44666666 666666666666665           3333 


Q ss_pred             CCCCCCCC--CCCCCCCCCcccccccccC
Q 010863          144 TNPILSSS--SHHQPGIVAGASSHVNLQI  170 (498)
Q Consensus       144 ~kp~~C~~--C~~sf~~~s~l~sH~~~~~  170 (498)
                      +..|.|..  |..++.....+++|.+.++
T Consensus       317 ~~~y~C~h~~C~~s~r~~~q~~~H~~evh  345 (467)
T KOG3608|consen  317 KTVYQCEHPDCHYSVRTYTQMRRHFLEVH  345 (467)
T ss_pred             ccceecCCCCCcHHHHHHHHHHHHHHHhc
Confidence            44466654  6666555566666655554

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.36  E-value=2.6e-13  Score=146.38  Aligned_cols=104  Identities=25%  Similarity=0.513  Sum_probs=93.4

Q ss_pred             ceeCCCCCCCCCCCCCccCChhhHhhhhhhcc--CCcccccCcCCccccchhHHHHHHhhhC--------------CCce
Q 010863           46 VYVCPEPNCVHHDPSRALGDLTGIKKHFCRKH--GEKKWKCDKCSKRYAVQSDWKAHSKTCG--------------TREY  109 (498)
Q Consensus        46 ~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Ht--gekp~~C~~CgK~F~~~s~L~~H~r~hg--------------ekpy  109 (498)
                      ...|++|       ++.+++...|+.|++.-+  .+..|.|..|.++|..+..|.+|+.+|.              -|.|
T Consensus       210 lltcpyc-------drgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKF  282 (1007)
T KOG3623|consen  210 LLTCPYC-------DRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKF  282 (1007)
T ss_pred             hhcchhH-------HHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccc
Confidence            3689999       899999999999987533  3456999999999999999999998731              2679


Q ss_pred             ecC-CCCccCChHHHHHHHHHhhhccccccccccCCCCCCCCCCCCCCCCCCccccccc
Q 010863          110 RCD-CGTLFSRRDSFITHRAFCDALAEESTRAITGTNPILSSSSHHQPGIVAGASSHVN  167 (498)
Q Consensus       110 ~C~-Cgk~F~~~s~L~~H~~~h~~~~~~s~r~h~~~kp~~C~~C~~sf~~~s~l~sH~~  167 (498)
                      +|. |+|.|+.+..|++|+           |+|.|||||.|+.|.|.|+...+..+||.
T Consensus       283 KCtECgKAFKfKHHLKEHl-----------RIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  283 KCTECGKAFKFKHHLKEHL-----------RIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             cccccchhhhhHHHHHhhh-----------eeecCCCCcCCcccccccccCCccccccc
Confidence            999 999999999999999           99999999999999999999999999984

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.12  E-value=1.1e-10  Score=126.95  Aligned_cols=103  Identities=21%  Similarity=0.439  Sum_probs=72.9

Q ss_pred             CCccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCccc
Q 010863            3 TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKW   82 (498)
Q Consensus         3 ekpy~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~   82 (498)
                      ++.+.|++|++.|. ...|..|+++|+               +++.|+ |       ++.+ .+..|..|+.+|..+|++
T Consensus       451 ~~H~~C~~Cgk~f~-~s~LekH~~~~H---------------kpv~Cp-C-------g~~~-~R~~L~~H~~thCp~Kpi  505 (567)
T PLN03086        451 KNHVHCEKCGQAFQ-QGEMEKHMKVFH---------------EPLQCP-C-------GVVL-EKEQMVQHQASTCPLRLI  505 (567)
T ss_pred             ccCccCCCCCCccc-hHHHHHHHHhcC---------------CCccCC-C-------CCCc-chhHHHhhhhccCCCCce
Confidence            35667888888775 566788877764               567777 6       5544 557778888778888888


Q ss_pred             ccCcCCcccc----------chhHHHHHHhhhCCCceecC-CCCccCChHHHHHHHHHhh
Q 010863           83 KCDKCSKRYA----------VQSDWKAHSKTCGTREYRCD-CGTLFSRRDSFITHRAFCD  131 (498)
Q Consensus        83 ~C~~CgK~F~----------~~s~L~~H~r~hgekpy~C~-Cgk~F~~~s~L~~H~~~h~  131 (498)
                      .|.+|++.|.          ....|..|..++|.+++.|. |++.|..+ .|..|+..+|
T Consensus       506 ~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~CG~rt~~C~~Cgk~Vrlr-dm~~H~~~~h  564 (567)
T PLN03086        506 TCRFCGDMVQAGGSAMDVRDRLRGMSEHESICGSRTAPCDSCGRSVMLK-EMDIHQIAVH  564 (567)
T ss_pred             eCCCCCCccccCccccchhhhhhhHHHHHHhcCCcceEccccCCeeeeh-hHHHHHHHhh
Confidence            8888887774          23467778777778888888 88777665 3677765443

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.93  E-value=2.3e-09  Score=116.58  Aligned_cols=137  Identities=18%  Similarity=0.273  Sum_probs=104.7

Q ss_pred             cccCccCcccCChHHHHHHHHhcC-----CC-ccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCC
Q 010863            6 FVCEICNKGFQRDQNLQLHRRGHN-----LP-WKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGE   79 (498)
Q Consensus         6 y~C~~CgK~F~~~s~L~~H~r~H~-----~p-~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htge   79 (498)
                      -.|..|.+.... .+|..|.....     .| ..|.........++.+.|+.|       ++.|. ...|.+|++.|+  
T Consensus       408 V~C~NC~~~i~l-~~l~lHe~~C~r~~V~Cp~~~Cg~v~~r~el~~H~~C~~C-------gk~f~-~s~LekH~~~~H--  476 (567)
T PLN03086        408 VECRNCKHYIPS-RSIALHEAYCSRHNVVCPHDGCGIVLRVEEAKNHVHCEKC-------GQAFQ-QGEMEKHMKVFH--  476 (567)
T ss_pred             EECCCCCCccch-hHHHHHHhhCCCcceeCCcccccceeeccccccCccCCCC-------CCccc-hHHHHHHHHhcC--
Confidence            469999887655 57889986654     22 136555555556788999999       88886 688999999986  


Q ss_pred             cccccCcCCccccchhHHHHHHhh-hCCCceecC-CCCccCC----------hHHHHHHHHHhhhccccccccccCCCCC
Q 010863           80 KKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTLFSR----------RDSFITHRAFCDALAEESTRAITGTNPI  147 (498)
Q Consensus        80 kp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-Cgk~F~~----------~s~L~~H~~~h~~~~~~s~r~h~~~kp~  147 (498)
                      +++.|+ |++.+ .+..|..|+++ +.+|++.|. |++.|..          ...|..|.           .+ .+.+++
T Consensus       477 kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE-----------~~-CG~rt~  542 (567)
T PLN03086        477 EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHE-----------SI-CGSRTA  542 (567)
T ss_pred             CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHH-----------Hh-cCCcce
Confidence            889999 99865 67899999988 899999999 9999952          34788887           33 378999


Q ss_pred             CCCCCCCCCCCCCcccccccc
Q 010863          148 LSSSSHHQPGIVAGASSHVNL  168 (498)
Q Consensus       148 ~C~~C~~sf~~~s~l~sH~~~  168 (498)
                      .|..|++.+.. ..+..|+..
T Consensus       543 ~C~~Cgk~Vrl-rdm~~H~~~  562 (567)
T PLN03086        543 PCDSCGRSVML-KEMDIHQIA  562 (567)
T ss_pred             EccccCCeeee-hhHHHHHHH
Confidence            99999987643 445555443

>PHA00733 hypothetical protein

Probab=98.82  E-value=3.3e-09  Score=95.39  Aligned_cols=82  Identities=15%  Similarity=0.260  Sum_probs=66.1

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhh--hh---hccCCcccccCcCCccccchhHHHHHHhhhCCCceecC-CCCc
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKH--FC---RKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCD-CGTL  116 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H--~r---~Htgekp~~C~~CgK~F~~~s~L~~H~r~hgekpy~C~-Cgk~  116 (498)
                      ..+.+.|.+|       .+.|.....|..+  ++   .++++++|.|+.|++.|.....|..|++.+ +++|.|. |++.
T Consensus        37 ~~~~~~~~~~-------~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h-~~~~~C~~CgK~  108 (128)
T PHA00733         37 EQKRLIRAVV-------KTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT-EHSKVCPVCGKE  108 (128)
T ss_pred             hhhhHHHHHH-------hhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC-CcCccCCCCCCc
Confidence            5688999999       6677666655555  22   234588999999999999999999999875 4679999 9999


Q ss_pred             cCChHHHHHHHHHhhh
Q 010863          117 FSRRDSFITHRAFCDA  132 (498)
Q Consensus       117 F~~~s~L~~H~~~h~~  132 (498)
                      |.....|.+|++..|+
T Consensus       109 F~~~~sL~~H~~~~h~  124 (128)
T PHA00733        109 FRNTDSTLDHVCKKHN  124 (128)
T ss_pred             cCCHHHHHHHHHHhcC
Confidence            9999999999976553

>PHA00733 hypothetical protein

Probab=98.81  E-value=3.8e-09  Score=94.95  Aligned_cols=84  Identities=17%  Similarity=0.192  Sum_probs=70.9

Q ss_pred             CCccccCccCcccCChHHHHHH--HHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCc
Q 010863            3 TNRFVCEICNKGFQRDQNLQLH--RRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEK   80 (498)
Q Consensus         3 ekpy~C~~CgK~F~~~s~L~~H--~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgek   80 (498)
                      .|+++|.+|.+.|.....|..|  ++.|.          ....+++|.|+.|       ++.|.....|..|++.|  ++
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~----------~~~~~kPy~C~~C-------gk~Fss~s~L~~H~r~h--~~   98 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLL----------TSKAVSPYVCPLC-------LMPFSSSVSLKQHIRYT--EH   98 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhc----------ccCCCCCccCCCC-------CCcCCCHHHHHHHHhcC--Cc
Confidence            5789999999999998877777  33322          1115789999999       89999999999999987  46


Q ss_pred             ccccCcCCccccchhHHHHHHhh-hC
Q 010863           81 KWKCDKCSKRYAVQSDWKAHSKT-CG  105 (498)
Q Consensus        81 p~~C~~CgK~F~~~s~L~~H~r~-hg  105 (498)
                      +|.|.+|++.|.....|++|+.. |+
T Consensus        99 ~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         99 SKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CccCCCCCCccCCHHHHHHHHHHhcC
Confidence            79999999999999999999987 65

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.69  E-value=2.4e-09  Score=110.39  Aligned_cols=147  Identities=18%  Similarity=0.247  Sum_probs=95.5

Q ss_pred             ccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccC------
Q 010863            5 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHG------   78 (498)
Q Consensus         5 py~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htg------   78 (498)
                      -|.|..|...|.+-..|-+|+....             -...|+|++|       +|.|....+|..|.|.|.-      
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RI-------------V~vEYrCPEC-------~KVFsCPANLASHRRWHKPR~eaa~  326 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRI-------------VHVEYRCPEC-------DKVFSCPANLASHRRWHKPRPEAAK  326 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCee-------------EEeeecCCcc-------cccccCchhhhhhhcccCCchhhhh
Confidence            3899999999999999999975432             3356999999       9999999999999999842      


Q ss_pred             --Cc-------------------------ccccCcCCccccchhHHHHHHhhhCC----C--------------ceecC-
Q 010863           79 --EK-------------------------KWKCDKCSKRYAVQSDWKAHSKTCGT----R--------------EYRCD-  112 (498)
Q Consensus        79 --ek-------------------------p~~C~~CgK~F~~~s~L~~H~r~hge----k--------------py~C~-  112 (498)
                        .+                         -|.|.+|+|+|.+...|++|+.+|-.    +              -+-|. 
T Consensus       327 a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~  406 (500)
T KOG3993|consen  327 AGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQA  406 (500)
T ss_pred             cCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccc
Confidence              11                         26777777777777777777655211    0              12233 


Q ss_pred             CCCccCChHHHHHHHHHhhhcc------------------ccccccccCCCCCCCCCCCCCCCCCCcccccccccCC
Q 010863          113 CGTLFSRRDSFITHRAFCDALA------------------EESTRAITGTNPILSSSSHHQPGIVAGASSHVNLQIP  171 (498)
Q Consensus       113 Cgk~F~~~s~L~~H~~~h~~~~------------------~~s~r~h~~~kp~~C~~C~~sf~~~s~l~sH~~~~~p  171 (498)
                      |...|...+.--.+.-.+....                  +...|.-..+.-|.|..|...|...-++.+|+++.++
T Consensus       407 ~a~h~~a~~~~g~~vl~~a~sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hp  483 (500)
T KOG3993|consen  407 VATHSSASDSHGDEVLYVAGSAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHP  483 (500)
T ss_pred             cccccccccccccceeeeeccccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcCh
Confidence            4444433332222221111100                  0011222335568888888888888888888887765

>PHA02768 hypothetical protein; Provisional

Probab=98.37  E-value=1.8e-07  Score=71.37  Aligned_cols=45  Identities=18%  Similarity=0.236  Sum_probs=39.8

Q ss_pred             CccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHh
Q 010863            4 NRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIK   70 (498)
Q Consensus         4 kpy~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk   70 (498)
                      --|+|++|||.|....+|..|+++|+               ++|+|..|       +|.|...+.|.
T Consensus         4 ~~y~C~~CGK~Fs~~~~L~~H~r~H~---------------k~~kc~~C-------~k~f~~~s~l~   48 (55)
T PHA02768          4 LGYECPICGEIYIKRKSMITHLRKHN---------------TNLKLSNC-------KRISLRTGEYI   48 (55)
T ss_pred             cccCcchhCCeeccHHHHHHHHHhcC---------------CcccCCcc-------cceecccceeE
Confidence            45899999999999999999999995               68999999       89998777654

>PHA02768 hypothetical protein; Provisional

Probab=98.30  E-value=2.5e-07  Score=70.55  Aligned_cols=42  Identities=14%  Similarity=0.331  Sum_probs=27.8

Q ss_pred             eeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHH
Q 010863           47 YVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDW   97 (498)
Q Consensus        47 y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L   97 (498)
                      |+|++|       ++.|.....|..|+++|+  ++|+|..|+|.|.+.+.|
T Consensus         6 y~C~~C-------GK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPIC-------GEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchh-------CCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            566666       666766666777766666  566666666666655544

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.17  E-value=6.9e-07  Score=92.62  Aligned_cols=81  Identities=19%  Similarity=0.472  Sum_probs=69.1

Q ss_pred             ceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhhhCC-------------------
Q 010863           46 VYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGT-------------------  106 (498)
Q Consensus        46 ~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~hge-------------------  106 (498)
                      .|.|..|       ...|.+...|.+|.+.--..-.|+|++|+|.|.-..+|..|+|.|.-                   
T Consensus       267 dyiCqLC-------K~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~r  339 (500)
T KOG3993|consen  267 DYICQLC-------KEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETR  339 (500)
T ss_pred             HHHHHHH-------HHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhh
Confidence            5999999       78999999999998754444569999999999999999999987421                   


Q ss_pred             ---------------CceecC-CCCccCChHHHHHHHHHhhhc
Q 010863          107 ---------------REYRCD-CGTLFSRRDSFITHRAFCDAL  133 (498)
Q Consensus       107 ---------------kpy~C~-Cgk~F~~~s~L~~H~~~h~~~  133 (498)
                                     ..|.|. |+|+|++...|++|+..|+..
T Consensus       340 ae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~  382 (500)
T KOG3993|consen  340 AEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRA  382 (500)
T ss_pred             hhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhcc
Confidence                           148999 999999999999999888653

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.16  E-value=8.1e-07  Score=57.75  Aligned_cols=26  Identities=31%  Similarity=0.792  Sum_probs=22.9

Q ss_pred             hHhhhhhhccCCcccccCcCCccccc
Q 010863           68 GIKKHFCRKHGEKKWKCDKCSKRYAV   93 (498)
Q Consensus        68 ~Lk~H~r~Htgekp~~C~~CgK~F~~   93 (498)
                      +|.+|+++|+++|||.|++|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            47899999999999999999999863

...

>PHA00732 hypothetical protein

Probab=97.71  E-value=2.6e-05  Score=64.38  Aligned_cols=48  Identities=23%  Similarity=0.433  Sum_probs=32.7

Q ss_pred             ccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhcc
Q 010863            5 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKH   77 (498)
Q Consensus         5 py~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Ht   77 (498)
                      ||+|++|++.|.....|+.|++.++             .  ++.|++|       ++.|.   .|..|++++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H-------------~--~~~C~~C-------gKsF~---~l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNH-------------T--LTKCPVC-------NKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhccc-------------C--CCccCCC-------CCEeC---ChhhhhcccC
Confidence            5778888888888888888877432             1  2467777       77776   4667775543

>PHA00616 hypothetical protein

Probab=97.70  E-value=1.5e-05  Score=58.14  Aligned_cols=34  Identities=12%  Similarity=0.252  Sum_probs=31.4

Q ss_pred             ccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCC
Q 010863            5 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPE   51 (498)
Q Consensus         5 py~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~   51 (498)
                      ||+|..||+.|..++.|..|++.|+             +++++.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~h-------------g~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVH-------------KQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhc-------------CCCccceeE
Confidence            6999999999999999999999999             788888865

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.63  E-value=1.5e-05  Score=80.20  Aligned_cols=70  Identities=23%  Similarity=0.501  Sum_probs=38.7

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhcc-CCcccccCcCCccccchhHHHHHHhh-hCCCceecC-CCCccCC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKH-GEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTLFSR  119 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Ht-gekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-Cgk~F~~  119 (498)
                      ++|+|+|++-+|     .|.|+....|+-|+..-+ ..+...-+          .-..|.-. ...|||+|+ |+|+|+.
T Consensus       346 d~KpykCpV~gC-----~K~YknqnGLKYH~lhGH~~~~~~~~p----------~p~~~~~F~~~~KPYrCevC~KRYKN  410 (423)
T COG5189         346 DGKPYKCPVEGC-----NKKYKNQNGLKYHMLHGHQNQKLHENP----------SPEKMNIFSAKDKPYRCEVCDKRYKN  410 (423)
T ss_pred             cCceecCCCCCc-----hhhhccccchhhhhhccccCcccCCCC----------CccccccccccCCceeccccchhhcc
Confidence            457777777777     777777777777765322 11100000          00001011 234777777 7777777


Q ss_pred             hHHHHHHH
Q 010863          120 RDSFITHR  127 (498)
Q Consensus       120 ~s~L~~H~  127 (498)
                      ..-|+.|+
T Consensus       411 lNGLKYHr  418 (423)
T COG5189         411 LNGLKYHR  418 (423)
T ss_pred             Cccceecc
Confidence            77777775

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.57  E-value=2.9e-05  Score=78.16  Aligned_cols=26  Identities=23%  Similarity=0.622  Sum_probs=23.4

Q ss_pred             CCCccccCc--cCcccCChHHHHHHHHh
Q 010863            2 ATNRFVCEI--CNKGFQRDQNLQLHRRG   27 (498)
Q Consensus         2 gekpy~C~~--CgK~F~~~s~L~~H~r~   27 (498)
                      ++|||+|++  |.|.|+....|+-|+.-
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lh  373 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLH  373 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhc
Confidence            469999998  99999999999999764

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=97.40  E-value=8.6e-05  Score=48.20  Aligned_cols=26  Identities=35%  Similarity=0.658  Sum_probs=23.3

Q ss_pred             HHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCC
Q 010863           20 NLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGD   65 (498)
Q Consensus        20 ~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~   65 (498)
                      +|.+|+++|.             ++++|.|++|       ++.|..
T Consensus         1 ~l~~H~~~H~-------------~~k~~~C~~C-------~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHT-------------GEKPYKCPYC-------GKSFSN   26 (26)
T ss_dssp             HHHHHHHHHS-------------SSSSEEESSS-------SEEESS
T ss_pred             CHHHHhhhcC-------------CCCCCCCCCC-------cCeeCc
Confidence            5899999998             9999999999       888863

...

>PHA00616 hypothetical protein

Probab=97.39  E-value=4.9e-05  Score=55.49  Aligned_cols=35  Identities=14%  Similarity=0.257  Sum_probs=23.9

Q ss_pred             ceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           46 VYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        46 ~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      +|+|+.|       |+.|..+..|.+|++.|++++++.|++-
T Consensus         1 pYqC~~C-------G~~F~~~s~l~~H~r~~hg~~~~~~~~~   35 (44)
T PHA00616          1 MYQCLRC-------GGIFRKKKEVIEHLLSVHKQNKLTLEYF   35 (44)
T ss_pred             CCccchh-------hHHHhhHHHHHHHHHHhcCCCccceeEE
Confidence            4667777       6777777777777777777777766653

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.39  E-value=0.0002  Score=54.65  Aligned_cols=52  Identities=25%  Similarity=0.439  Sum_probs=32.1

Q ss_pred             ccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhcc
Q 010863            5 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKH   77 (498)
Q Consensus         5 py~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Ht   77 (498)
                      .|.|++|++ ..+...|..|....+..           ..+.+.|++|       ...+.  .+|.+|+..++
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~-----------~~~~v~CPiC-------~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRS-----------ESKNVVCPIC-------SSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcC-----------CCCCccCCCc-------hhhhh--hHHHHHHHHhc
Confidence            477888888 44456788886665411           3356778887       44333  36777766554

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.37  E-value=0.0001  Score=46.00  Aligned_cols=23  Identities=43%  Similarity=0.908  Sum_probs=21.7

Q ss_pred             cccCccCcccCChHHHHHHHHhc
Q 010863            6 FVCEICNKGFQRDQNLQLHRRGH   28 (498)
Q Consensus         6 y~C~~CgK~F~~~s~L~~H~r~H   28 (498)
                      |+|++|++.|.++..|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            79999999999999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PHA00732 hypothetical protein

Probab=97.35  E-value=0.00013  Score=60.18  Aligned_cols=45  Identities=27%  Similarity=0.423  Sum_probs=35.9

Q ss_pred             ceeCCCCCCCCCCCCCccCChhhHhhhhhh-ccCCcccccCcCCccccchhHHHHHHhh
Q 010863           46 VYVCPEPNCVHHDPSRALGDLTGIKKHFCR-KHGEKKWKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        46 ~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~-Htgekp~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      +|.|++|       ++.|.....|++|++. |.+   +.|++|++.|.   .|..|.++
T Consensus         1 py~C~~C-------gk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          1 MFKCPIC-------GFTTVTLFALKQHARRNHTL---TKCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             CccCCCC-------CCccCCHHHHHHHhhcccCC---CccCCCCCEeC---Chhhhhcc
Confidence            4788888       8889999999999884 543   57999999887   47788766

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.10  E-value=0.00061  Score=51.96  Aligned_cols=47  Identities=21%  Similarity=0.376  Sum_probs=21.7

Q ss_pred             eeCCCCCCCCCCCCCccCChhhHhhhhhh-ccCC-cccccCcCCccccchhHHHHHHhh
Q 010863           47 YVCPEPNCVHHDPSRALGDLTGIKKHFCR-KHGE-KKWKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        47 y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~-Htge-kp~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      |.|++|       ++ ..+...|..|... |..+ +.+.|++|.+.+.  .+|..|++.
T Consensus         3 f~CP~C-------~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~   51 (54)
T PF05605_consen    3 FTCPYC-------GK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNS   51 (54)
T ss_pred             cCCCCC-------CC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHH
Confidence            555555       44 2334455555443 2222 3455555555433  245555544

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=96.99  E-value=0.0008  Score=78.75  Aligned_cols=75  Identities=19%  Similarity=0.291  Sum_probs=39.0

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhh--hCCCceecC-CCCccCC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT--CGTREYRCD-CGTLFSR  119 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~--hgekpy~C~-Cgk~F~~  119 (498)
                      ..|.|+|+.|       +..|+....|..|||..+-+-.-  .+| +.+.....+.+ ..+  .+.++|.|. |...|..
T Consensus       462 ~~kt~~cpkc-------~~~yk~a~~L~vhmRskhp~~~~--~~c-~~gq~~~~~ar-g~~~~~~~~p~~C~~C~~sttt  530 (1406)
T KOG1146|consen  462 FFKTLKCPKC-------NWHYKLAQTLGVHMRSKHPESQS--AYC-KAGQNHPRLAR-GEVYRCPGKPYPCRACNYSTTT  530 (1406)
T ss_pred             ccccccCCcc-------chhhhhHHHhhhcccccccccch--hHh-Hhccccccccc-cccccCCCCcccceeeeeeeec
Confidence            4467777777       67777777777777763322111  222 11111111111 011  344566666 6666666


Q ss_pred             hHHHHHHHH
Q 010863          120 RDSFITHRA  128 (498)
Q Consensus       120 ~s~L~~H~~  128 (498)
                      +..|.+|++
T Consensus       531 ng~Lsihlq  539 (1406)
T KOG1146|consen  531 NGNLSIHLQ  539 (1406)
T ss_pred             chHHHHHHH
Confidence            666666655

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.97  E-value=0.00054  Score=42.45  Aligned_cols=24  Identities=42%  Similarity=0.901  Sum_probs=20.5

Q ss_pred             cccCccCcccCChHHHHHHHHhcC
Q 010863            6 FVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         6 y~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      |+|++|++.|.+...|..|+++|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            789999999999999999999874

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.84  E-value=0.00074  Score=56.55  Aligned_cols=72  Identities=18%  Similarity=0.456  Sum_probs=16.1

Q ss_pred             ccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCc
Q 010863            7 VCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDK   86 (498)
Q Consensus         7 ~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~   86 (498)
                      +|..|+..|.....|..|+...+             +-.   .+.        .+.+.....+..+++... ...|.|.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H-------------~~~---~~~--------~~~l~~~~~~~~~~~~~~-~~~~~C~~   55 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKH-------------GFD---IPD--------QKYLVDPNRLLNYLRKKV-KESFRCPY   55 (100)
T ss_dssp             -------------------------------------------------------------------------SSEEBSS
T ss_pred             Ccccccccccccccccccccccc-------------ccc---ccc--------cccccccccccccccccc-CCCCCCCc
Confidence            47888888888888888876554             110   001        111222333333333221 12567777


Q ss_pred             CCccccchhHHHHHHhh
Q 010863           87 CSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        87 CgK~F~~~s~L~~H~r~  103 (498)
                      |++.|.....|..|++.
T Consensus        56 C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen   56 CNKTFRSREALQEHMRS   72 (100)
T ss_dssp             SS-EESSHHHHHHHHHH
T ss_pred             cCCCCcCHHHHHHHHcC
Confidence            77777777777777776

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.76  E-value=0.00074  Score=43.75  Aligned_cols=25  Identities=36%  Similarity=0.711  Sum_probs=23.6

Q ss_pred             ccccCccCcccCChHHHHHHHHhcC
Q 010863            5 RFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         5 py~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      +|+|.+|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            6999999999999999999999885

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=96.72  E-value=0.0016  Score=72.47  Aligned_cols=29  Identities=28%  Similarity=0.533  Sum_probs=19.8

Q ss_pred             cccCccCcccC---------------ChHHHHHHHHhcCCCccc
Q 010863            6 FVCEICNKGFQ---------------RDQNLQLHRRGHNLPWKL   34 (498)
Q Consensus         6 y~C~~CgK~F~---------------~~s~L~~H~r~H~~p~~c   34 (498)
                      +.|.+|++.|.               ....|+.|++.-|+.+.|
T Consensus       100 ~~C~~C~~~~~~~~~~~~~~~c~~~~s~~~Lk~H~~~~H~~~~c  143 (669)
T KOG2231|consen  100 HSCHICDRRFRALYNKKECLHCTEFKSVENLKNHMRDQHKLHLC  143 (669)
T ss_pred             hhcCccccchhhhcccCCCccccchhHHHHHHHHHHHhhhhhcc
Confidence            56777777773               677899999665534333

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.60  E-value=0.0015  Score=40.68  Aligned_cols=21  Identities=33%  Similarity=0.812  Sum_probs=10.4

Q ss_pred             cccCcCCccccchhHHHHHHh
Q 010863           82 WKCDKCSKRYAVQSDWKAHSK  102 (498)
Q Consensus        82 ~~C~~CgK~F~~~s~L~~H~r  102 (498)
                      |+|++|++.|.++..|++|++
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~   21 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMR   21 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHh
Confidence            345555555555555555544

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=96.55  E-value=0.00098  Score=69.00  Aligned_cols=136  Identities=15%  Similarity=0.170  Sum_probs=98.5

Q ss_pred             CccccCccCcccCChHHHHHHHH--hcCCCccccccccccccC--cceeCC--CCCCCCCCCCCccCChhhHhhhhhhcc
Q 010863            4 NRFVCEICNKGFQRDQNLQLHRR--GHNLPWKLKQRTSKEIRK--KVYVCP--EPNCVHHDPSRALGDLTGIKKHFCRKH   77 (498)
Q Consensus         4 kpy~C~~CgK~F~~~s~L~~H~r--~H~~p~~c~~~~~~~~~~--k~y~C~--~C~C~~~~~~k~F~~~s~Lk~H~r~Ht   77 (498)
                      .++.|..|.+.|.+...|.+|.+  .|.             .+  +++.|+  .|       ++.|.+...+++|...|+
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~-------------~~~~~~~~~p~~~~-------~~~~~~~~~~~~~~~~~~  347 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHS-------------GESLKPFSCPYSLC-------GKLFSRNDALKRHILLHT  347 (467)
T ss_pred             cCCCCccccCCccccccccccccccccc-------------cccCCceeeeccCC-------CccccccccccCCccccc
Confidence            47889999999999999999998  676             66  899999  67       899999999999999999


Q ss_pred             CCcccccCc--CCccccchhHH----HHHHhh--hCCCceecC---CCCccCChHHHHHHHHHhhhccccccccccC--C
Q 010863           78 GEKKWKCDK--CSKRYAVQSDW----KAHSKT--CGTREYRCD---CGTLFSRRDSFITHRAFCDALAEESTRAITG--T  144 (498)
Q Consensus        78 gekp~~C~~--CgK~F~~~s~L----~~H~r~--hgekpy~C~---Cgk~F~~~s~L~~H~~~h~~~~~~s~r~h~~--~  144 (498)
                      +.+++.|..  |.+.+.....-    ......  ...+.+.|.   |...+.+...+..|.           ..+..  .
T Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~  416 (467)
T COG5048         348 SISPAKEKLLNSSSKFSPLLNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHI-----------ITHLSFRP  416 (467)
T ss_pred             CCCccccccccCccccccccCCCCccchhhccCccCCccccccccchhhhhcccccccccc-----------ccccccCC
Confidence            888777754  55555544441    111111  455667776   777777777777776           33333  3


Q ss_pred             CCCCCCCCCCCCCCCCcccccccccC
Q 010863          145 NPILSSSSHHQPGIVAGASSHVNLQI  170 (498)
Q Consensus       145 kp~~C~~C~~sf~~~s~l~sH~~~~~  170 (498)
                      ..+.+..|.+.+.....+..|.+.+.
T Consensus       417 ~~~~~~~~~~~~~~~~~~~~~~~~~~  442 (467)
T COG5048         417 YNCKNPPCSKSFNRHYNLIPHKKIHT  442 (467)
T ss_pred             cCCCCCcchhhccCcccccccccccc
Confidence            35777788888888888877776553

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.32  E-value=0.0027  Score=53.12  Aligned_cols=72  Identities=17%  Similarity=0.247  Sum_probs=20.5

Q ss_pred             eCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhhhCCCceecC-CCCccCChHHHHHH
Q 010863           48 VCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCD-CGTLFSRRDSFITH  126 (498)
Q Consensus        48 ~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~hgekpy~C~-Cgk~F~~~s~L~~H  126 (498)
                      +|..|       +..|.....|..|+...++-..-    ..+.+.....+..+.+..-...+.|. |++.|.....|..|
T Consensus         1 ~C~~C-------~~~f~~~~~l~~H~~~~H~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~H   69 (100)
T PF12756_consen    1 QCLFC-------DESFSSVDDLLQHMKKKHGFDIP----DQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEH   69 (100)
T ss_dssp             -----------------------------------------------------------SSEEBSSSS-EESSHHHHHHH
T ss_pred             Ccccc-------ccccccccccccccccccccccc----cccccccccccccccccccCCCCCCCccCCCCcCHHHHHHH
Confidence            48888       89999999999999876653211    11122233344444443233479999 99999999999999


Q ss_pred             HHHh
Q 010863          127 RAFC  130 (498)
Q Consensus       127 ~~~h  130 (498)
                      ++.+
T Consensus        70 m~~~   73 (100)
T PF12756_consen   70 MRSK   73 (100)
T ss_dssp             HHHT
T ss_pred             HcCc
Confidence            9754

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.06  E-value=0.0053  Score=37.83  Aligned_cols=21  Identities=24%  Similarity=0.757  Sum_probs=9.0

Q ss_pred             cccCcCCccccchhHHHHHHh
Q 010863           82 WKCDKCSKRYAVQSDWKAHSK  102 (498)
Q Consensus        82 ~~C~~CgK~F~~~s~L~~H~r  102 (498)
                      |.|++|++.|.....|+.|++
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~   21 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMR   21 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHH
Confidence            344444444444444444444

...

>smart00355 ZnF_C2H2 zinc finger

Probab=95.95  E-value=0.0055  Score=38.19  Aligned_cols=24  Identities=33%  Similarity=0.670  Sum_probs=22.2

Q ss_pred             cccCccCcccCChHHHHHHHHhcC
Q 010863            6 FVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         6 y~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      |+|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            789999999999999999999774

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=95.74  E-value=0.013  Score=69.09  Aligned_cols=133  Identities=14%  Similarity=0.161  Sum_probs=76.8

Q ss_pred             cccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccC
Q 010863            6 FVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCD   85 (498)
Q Consensus         6 y~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~   85 (498)
                      |+|+.|+..|+....|..|+|.-+             .+..-  .+|        +.+.....+.+-...--+.++|.|.
T Consensus       466 ~~cpkc~~~yk~a~~L~vhmRskh-------------p~~~~--~~c--------~~gq~~~~~arg~~~~~~~~p~~C~  522 (1406)
T KOG1146|consen  466 LKCPKCNWHYKLAQTLGVHMRSKH-------------PESQS--AYC--------KAGQNHPRLARGEVYRCPGKPYPCR  522 (1406)
T ss_pred             ccCCccchhhhhHHHhhhcccccc-------------cccch--hHh--------HhccccccccccccccCCCCcccce
Confidence            049999999999999999999854             11111  444        2232222222222223356899999


Q ss_pred             cCCccccchhHHHHHHhh--hCCCceecCCCCccCChHHHHHHHHHhhhc-----ccc------ccccccCCC-CCCCCC
Q 010863           86 KCSKRYAVQSDWKAHSKT--CGTREYRCDCGTLFSRRDSFITHRAFCDAL-----AEE------STRAITGTN-PILSSS  151 (498)
Q Consensus        86 ~CgK~F~~~s~L~~H~r~--hgekpy~C~Cgk~F~~~s~L~~H~~~h~~~-----~~~------s~r~h~~~k-p~~C~~  151 (498)
                      .|...+..+..|.+|+..  |..+.-.        .......|.+.+...     -++      ....-..++ .+.|..
T Consensus       523 ~C~~stttng~LsihlqS~~h~~~lee--------~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~v  594 (1406)
T KOG1146|consen  523 ACNYSTTTNGNLSIHLQSDLHRNELEE--------AEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEV  594 (1406)
T ss_pred             eeeeeeecchHHHHHHHHHhhHHHHHH--------HHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhh
Confidence            999999999999999987  4321000        000011111111110     000      011112223 488999


Q ss_pred             CCCCCCCCCccccccccc
Q 010863          152 SHHQPGIVAGASSHVNLQ  169 (498)
Q Consensus       152 C~~sf~~~s~l~sH~~~~  169 (498)
                      |....+...+++-|+..-
T Consensus       595 c~yetniarnlrihmtss  612 (1406)
T KOG1146|consen  595 CSYETNIARNLRIHMTAS  612 (1406)
T ss_pred             hcchhhhhhccccccccC
Confidence            999999999998887643

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=95.67  E-value=0.0057  Score=39.52  Aligned_cols=22  Identities=32%  Similarity=0.777  Sum_probs=12.7

Q ss_pred             ceecC-CCCccCChHHHHHHHHH
Q 010863          108 EYRCD-CGTLFSRRDSFITHRAF  129 (498)
Q Consensus       108 py~C~-Cgk~F~~~s~L~~H~~~  129 (498)
                      +|.|+ |++.|.....|.+|++.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~   23 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRS   23 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCT
T ss_pred             CCCCCccCCccCChhHHHHHhHH
Confidence            35566 66666666666666533

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=94.98  E-value=0.017  Score=43.40  Aligned_cols=31  Identities=13%  Similarity=0.224  Sum_probs=17.7

Q ss_pred             CCcccccCcCCccccchhHHHHHHhh-hCCCc
Q 010863           78 GEKKWKCDKCSKRYAVQSDWKAHSKT-CGTRE  108 (498)
Q Consensus        78 gekp~~C~~CgK~F~~~s~L~~H~r~-hgekp  108 (498)
                      .+.|-.|++|+..+....+|++|+.+ |+.|+
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            45667777777777777777777766 66654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PRK04860 hypothetical protein; Provisional

Probab=94.82  E-value=0.014  Score=54.70  Aligned_cols=35  Identities=29%  Similarity=0.750  Sum_probs=21.3

Q ss_pred             ccccCcCCccccchhHHHHHHhh-hCCCceecC-CCCccCC
Q 010863           81 KWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTLFSR  119 (498)
Q Consensus        81 p~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-Cgk~F~~  119 (498)
                      +|.|. |++   ....+++|.++ .++++|.|. |++.|..
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~  155 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVF  155 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEE
Confidence            46665 665   44556666666 566666666 6666554

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=94.66  E-value=0.018  Score=36.42  Aligned_cols=23  Identities=43%  Similarity=0.980  Sum_probs=21.4

Q ss_pred             cccCccCcccCChHHHHHHHHhc
Q 010863            6 FVCEICNKGFQRDQNLQLHRRGH   28 (498)
Q Consensus         6 y~C~~CgK~F~~~s~L~~H~r~H   28 (498)
                      |.|++|++.|.+...|+.|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            78999999999999999999865

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=94.27  E-value=0.036  Score=41.75  Aligned_cols=28  Identities=21%  Similarity=0.433  Sum_probs=20.9

Q ss_pred             CCCccccCccCcccCChHHHHHHHHhcC
Q 010863            2 ATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         2 gekpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      .+.|-.|++|+..+....+|++|++.+|
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H   48 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRH   48 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHT
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHh
Confidence            3678899999999999999999998877

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PRK04860 hypothetical protein; Provisional

Probab=93.88  E-value=0.03  Score=52.37  Aligned_cols=19  Identities=11%  Similarity=0.044  Sum_probs=10.2

Q ss_pred             ccccCCCCCCCCCCCCCCC
Q 010863          139 RAITGTNPILSSSSHHQPG  157 (498)
Q Consensus       139 r~h~~~kp~~C~~C~~sf~  157 (498)
                      ++|+++++|.|..|...+.
T Consensus       136 ri~~g~~~YrC~~C~~~l~  154 (160)
T PRK04860        136 RVVRGEAVYRCRRCGETLV  154 (160)
T ss_pred             HHhcCCccEECCCCCceeE
Confidence            4455555555555555544

>smart00355 ZnF_C2H2 zinc finger

Probab=93.72  E-value=0.052  Score=33.58  Aligned_cols=21  Identities=33%  Similarity=0.885  Sum_probs=13.9

Q ss_pred             eecC-CCCccCChHHHHHHHHH
Q 010863          109 YRCD-CGTLFSRRDSFITHRAF  129 (498)
Q Consensus       109 y~C~-Cgk~F~~~s~L~~H~~~  129 (498)
                      |.|. |++.|.....|..|++.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~   22 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRT   22 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHH
Confidence            4566 77777777777777643

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=93.62  E-value=0.054  Score=55.68  Aligned_cols=110  Identities=16%  Similarity=0.210  Sum_probs=53.9

Q ss_pred             ccccCc--cCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcc-
Q 010863            5 RFVCEI--CNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKK-   81 (498)
Q Consensus         5 py~C~~--CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp-   81 (498)
                      .|.|+.  |..+...-..|+.|.+..|...-|....   ..++.|.|+.         +.| ++..|+.|...-..+.- 
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~~~C~~C~---~nKk~F~~E~---------~lF-~~~~Lr~H~~~G~~e~GF  217 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGFVLCSECI---GNKKDFWNEI---------RLF-RSSTLRDHKNGGLEEEGF  217 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCcEEhHhhh---cCcccCccce---------eee-ecccccccccCCccccCc
Confidence            367765  6666555678999988765222222100   0112222211         111 23444555433222211 


Q ss_pred             ---cccCcCCccccchhHHHHHHhhhCCCceecC-CC----CccCChHHHHHHH
Q 010863           82 ---WKCDKCSKRYAVQSDWKAHSKTCGTREYRCD-CG----TLFSRRDSFITHR  127 (498)
Q Consensus        82 ---~~C~~CgK~F~~~s~L~~H~r~hgekpy~C~-Cg----k~F~~~s~L~~H~  127 (498)
                         -.|..|.+.|-.-..|.+|+|.--|+-|.|+ -+    .-|.....|..|-
T Consensus       218 KGHP~C~FC~~~FYdDDEL~~HcR~~HE~ChICD~v~p~~~QYFK~Y~~Le~HF  271 (493)
T COG5236         218 KGHPLCIFCKIYFYDDDELRRHCRLRHEACHICDMVGPIRYQYFKSYEDLEAHF  271 (493)
T ss_pred             CCCchhhhccceecChHHHHHHHHhhhhhhhhhhccCccchhhhhCHHHHHHHh
Confidence               2466666666666666666666334555554 22    2355556666665

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.50  E-value=0.045  Score=56.57  Aligned_cols=26  Identities=35%  Similarity=0.666  Sum_probs=24.9

Q ss_pred             CccccC--ccCcccCChHHHHHHHHhcC
Q 010863            4 NRFVCE--ICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         4 kpy~C~--~CgK~F~~~s~L~~H~r~H~   29 (498)
                      +++.|+  .|++.|.+...+.+|...|.
T Consensus       320 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~  347 (467)
T COG5048         320 KPFSCPYSLCGKLFSRNDALKRHILLHT  347 (467)
T ss_pred             CceeeeccCCCccccccccccCCccccc
Confidence            899999  79999999999999999998

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=92.47  E-value=0.08  Score=33.20  Aligned_cols=23  Identities=26%  Similarity=0.600  Sum_probs=19.0

Q ss_pred             cccCccCcccCChHHHHHHHHhcC
Q 010863            6 FVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         6 y~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      |+|+.|+.... +..|.+|++.|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            79999999998 899999999875

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=92.44  E-value=0.036  Score=36.01  Aligned_cols=24  Identities=29%  Similarity=0.787  Sum_probs=20.9

Q ss_pred             ccccCccCcccCChHHHHHHHHhc
Q 010863            5 RFVCEICNKGFQRDQNLQLHRRGH   28 (498)
Q Consensus         5 py~C~~CgK~F~~~s~L~~H~r~H   28 (498)
                      .|.|.+|++.|.+...|..|++..
T Consensus         1 q~~C~~C~k~f~~~~~~~~H~~sk   24 (27)
T PF12171_consen    1 QFYCDACDKYFSSENQLKQHMKSK   24 (27)
T ss_dssp             -CBBTTTTBBBSSHHHHHCCTTSH
T ss_pred             CCCcccCCCCcCCHHHHHHHHccC
Confidence            378999999999999999998753

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2482 consensus Predicted C2H2-type Zn-finger protein [Transcription]

Probab=92.11  E-value=0.26  Score=50.82  Aligned_cols=119  Identities=18%  Similarity=0.260  Sum_probs=78.1

Q ss_pred             CcceeCCCCCCCCCCCCCccCChhhHhhhhhhccC--------------------C--cccccCcCCccccchhHHHHHH
Q 010863           44 KKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHG--------------------E--KKWKCDKCSKRYAVQSDWKAHS  101 (498)
Q Consensus        44 ~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htg--------------------e--kp~~C~~CgK~F~~~s~L~~H~  101 (498)
                      .+..+|-.|.      ......++.+..|+-..++                    +  ..+.|-+|.|.|..+..|+.||
T Consensus       142 ~fslqClFCn------~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeHM  215 (423)
T KOG2482|consen  142 IFSLQCLFCN------NEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEHM  215 (423)
T ss_pred             eeeeEEEEec------chhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHHH
Confidence            3456788884      3445556667777543222                    1  1367888999998888888888


Q ss_pred             hh--hCC---C----------------------------------------------------ceecC-CCCccCChHHH
Q 010863          102 KT--CGT---R----------------------------------------------------EYRCD-CGTLFSRRDSF  123 (498)
Q Consensus       102 r~--hge---k----------------------------------------------------py~C~-Cgk~F~~~s~L  123 (498)
                      |.  |..   |                                                    .-.|- |....-+...|
T Consensus       216 rkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~~~en~~~l  295 (423)
T KOG2482|consen  216 RKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCTNFYENPVFL  295 (423)
T ss_pred             HhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccceEEEeeccchhhHHHH
Confidence            86  421   0                                                    13677 88888888999


Q ss_pred             HHHHHHhhhccccc----------ccc--c----cCCCCCCCCCCCCCCCCCCcccccccc
Q 010863          124 ITHRAFCDALAEES----------TRA--I----TGTNPILSSSSHHQPGIVAGASSHVNL  168 (498)
Q Consensus       124 ~~H~~~h~~~~~~s----------~r~--h----~~~kp~~C~~C~~sf~~~s~l~sH~~~  168 (498)
                      ..||+..|...-..          .++  .    ...+...|-.|.-+|-....+..|+-.
T Consensus       296 ~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e  356 (423)
T KOG2482|consen  296 FEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVE  356 (423)
T ss_pred             HHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhccc
Confidence            99998776532111          010  0    123446678888899999999888753

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=91.72  E-value=0.15  Score=57.28  Aligned_cols=112  Identities=19%  Similarity=0.233  Sum_probs=70.2

Q ss_pred             CccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC-
Q 010863            9 EICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC-   87 (498)
Q Consensus         9 ~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C-   87 (498)
                      ..|.|.|.. ..|.+|++.-- +       ..+.....-.|..|       ...|.....|.+|++.++    |.|..| 
T Consensus       154 ~~e~k~Yt~-~el~~h~~~gd-~-------d~~s~rGhp~C~~C-------~~~fld~~el~rH~~~~h----~~chfC~  213 (669)
T KOG2231|consen  154 INERKLYTR-AELNLHLMFGD-P-------DDESCRGHPLCKFC-------HERFLDDDELYRHLRFDH----EFCHFCD  213 (669)
T ss_pred             eeeeehehH-HHHHHHHhcCC-C-------ccccccCCccchhh-------hhhhccHHHHHHhhccce----eheeecC
Confidence            345666665 56788876532 1       01111224578999       899999999999999876    566666 


Q ss_pred             -----CccccchhHHHHHHhhhCCCceecC---CC-CccCChHHHHHHHHHhhhccccccccccCCCCCCCC
Q 010863           88 -----SKRYAVQSDWKAHSKTCGTREYRCD---CG-TLFSRRDSFITHRAFCDALAEESTRAITGTNPILSS  150 (498)
Q Consensus        88 -----gK~F~~~s~L~~H~r~hgekpy~C~---Cg-k~F~~~s~L~~H~~~h~~~~~~s~r~h~~~kp~~C~  150 (498)
                           +..|....+|..|-|.   ..|.|+   |. +.|.....+..|++.|.       +.+..++.|.|.
T Consensus       214 ~~~~~neyy~~~~dLe~HfR~---~HflCE~~~C~~~~f~~~~~~ei~lk~~~-------~~~~~e~~~~~~  275 (669)
T KOG2231|consen  214 YKTGQNEYYNDYDDLEEHFRK---GHFLCEEEFCRTKKFYVAFELEIELKAHN-------RFIQHEKCYICR  275 (669)
T ss_pred             cccccchhcccchHHHHHhhh---cCccccccccccceeeehhHHHHHHHhhc-------cccchheeccCC
Confidence                 4567777889999886   337776   53 34444445555555443       234446666664

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=91.70  E-value=0.099  Score=32.94  Aligned_cols=19  Identities=26%  Similarity=0.726  Sum_probs=8.3

Q ss_pred             ccCcCCccccchhHHHHHH
Q 010863           83 KCDKCSKRYAVQSDWKAHS  101 (498)
Q Consensus        83 ~C~~CgK~F~~~s~L~~H~  101 (498)
                      .|.+|++.|.....|+.|+
T Consensus         2 ~C~~C~~~f~s~~~~~~H~   20 (25)
T PF12874_consen    2 YCDICNKSFSSENSLRQHL   20 (25)
T ss_dssp             EETTTTEEESSHHHHHHHH
T ss_pred             CCCCCCCCcCCHHHHHHHH
Confidence            3444444444444444443

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=90.63  E-value=0.24  Score=30.97  Aligned_cols=21  Identities=24%  Similarity=0.507  Sum_probs=9.9

Q ss_pred             eecC-CCCccCChHHHHHHHHHh
Q 010863          109 YRCD-CGTLFSRRDSFITHRAFC  130 (498)
Q Consensus       109 y~C~-Cgk~F~~~s~L~~H~~~h  130 (498)
                      |+|. |..... +..|.+|++.+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhh
Confidence            4555 555554 55555555443

>KOG4173 consensus Alpha-SNAP protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=90.23  E-value=0.11  Score=49.99  Aligned_cols=79  Identities=22%  Similarity=0.471  Sum_probs=64.3

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhh-h----------CCCceec
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-C----------GTREYRC  111 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-h----------gekpy~C  111 (498)
                      +...|.|++-+|     -+.|........|.-+-++   ..|.+|.+.|.+..-|..|+.. |          |...|.|
T Consensus        76 ~~~~~~cqvagc-----~~~~d~lD~~E~hY~~~h~---~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~C  147 (253)
T KOG4173|consen   76 RVPAFACQVAGC-----CQVFDALDDYEHHYHTLHG---NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQC  147 (253)
T ss_pred             ccccccccccch-----HHHHhhhhhHHHhhhhccc---chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHH
Confidence            446689999988     7888888877787765544   3899999999999999999865 4          3446999


Q ss_pred             C---CCCccCChHHHHHHHHH
Q 010863          112 D---CGTLFSRRDSFITHRAF  129 (498)
Q Consensus       112 ~---Cgk~F~~~s~L~~H~~~  129 (498)
                      -   |+.+|.+....+.|+-.
T Consensus       148 lvEgCt~KFkT~r~RkdH~I~  168 (253)
T KOG4173|consen  148 LVEGCTEKFKTSRDRKDHMIR  168 (253)
T ss_pred             HHHhhhhhhhhhhhhhhHHHH
Confidence            5   99999999999999843

>smart00451 ZnF_U1 U1-like zinc finger

Probab=88.64  E-value=0.3  Score=33.16  Aligned_cols=25  Identities=28%  Similarity=0.769  Sum_probs=21.9

Q ss_pred             CccccCccCcccCChHHHHHHHHhc
Q 010863            4 NRFVCEICNKGFQRDQNLQLHRRGH   28 (498)
Q Consensus         4 kpy~C~~CgK~F~~~s~L~~H~r~H   28 (498)
                      .+|.|++|++.|.....+..|++..
T Consensus         2 ~~~~C~~C~~~~~~~~~~~~H~~gk   26 (35)
T smart00451        2 GGFYCKLCNVTFTDEISVEAHLKGK   26 (35)
T ss_pred             cCeEccccCCccCCHHHHHHHHChH
Confidence            3689999999999999999998754

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=85.41  E-value=0.72  Score=29.59  Aligned_cols=21  Identities=29%  Similarity=0.680  Sum_probs=17.8

Q ss_pred             cccCccCcccCChHHHHHHHHh
Q 010863            6 FVCEICNKGFQRDQNLQLHRRG   27 (498)
Q Consensus         6 y~C~~CgK~F~~~s~L~~H~r~   27 (498)
                      ..|++||+.| ....|..|+.+
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            5799999999 55789999875

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=84.47  E-value=0.42  Score=49.36  Aligned_cols=77  Identities=27%  Similarity=0.552  Sum_probs=56.1

Q ss_pred             ceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCC---------ccccchhHHHHHHhh-hCC---Cc-eec
Q 010863           46 VYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCS---------KRYAVQSDWKAHSKT-CGT---RE-YRC  111 (498)
Q Consensus        46 ~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~Cg---------K~F~~~s~L~~H~r~-hge---kp-y~C  111 (498)
                      .|.|+.-.|     .........|+.|.+..++.  +-|.+|-         ....++..|+.|... -.+   |- -.|
T Consensus       151 ~F~CP~skc-----~~~C~~~k~lk~H~K~~H~~--~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C  223 (493)
T COG5236         151 SFKCPKSKC-----HRRCGSLKELKKHYKAQHGF--VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLC  223 (493)
T ss_pred             HhcCCchhh-----hhhhhhHHHHHHHHHhhcCc--EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchh
Confidence            488998776     78888889999999876653  5666652         233455677888766 222   22 358


Q ss_pred             C-CCCccCChHHHHHHHHH
Q 010863          112 D-CGTLFSRRDSFITHRAF  129 (498)
Q Consensus       112 ~-Cgk~F~~~s~L~~H~~~  129 (498)
                      . |.+.|-..+.|.+|++.
T Consensus       224 ~FC~~~FYdDDEL~~HcR~  242 (493)
T COG5236         224 IFCKIYFYDDDELRRHCRL  242 (493)
T ss_pred             hhccceecChHHHHHHHHh
Confidence            8 99999999999999963

>KOG2932 consensus E3 ubiquitin ligase involved in ubiquitination of E-cadherin complex [Posttranslational modification, protein turnover, chaperones]

Probab=84.11  E-value=20  Score=37.00  Aligned_cols=25  Identities=12%  Similarity=0.262  Sum_probs=21.5

Q ss_pred             hCCCceecC----CCCccCChHHHHHHHH
Q 010863          104 CGTREYRCD----CGTLFSRRDSFITHRA  128 (498)
Q Consensus       104 hgekpy~C~----Cgk~F~~~s~L~~H~~  128 (498)
                      .-+..|.|.    |.++|-...+|..|+.
T Consensus       140 ~~g~iFmC~~~~GC~RTyLsqrDlqAHIn  168 (389)
T KOG2932|consen  140 MMGGIFMCAAPHGCLRTYLSQRDLQAHIN  168 (389)
T ss_pred             cccceEEeecchhHHHHHhhHHHHHHHhh
Confidence            445679996    9999999999999984

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=83.82  E-value=0.67  Score=29.91  Aligned_cols=22  Identities=14%  Similarity=0.371  Sum_probs=13.5

Q ss_pred             eeCCCCCCCCCCCCCccCChhhHhhhhhh
Q 010863           47 YVCPEPNCVHHDPSRALGDLTGIKKHFCR   75 (498)
Q Consensus        47 y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~   75 (498)
                      |.|..|       ++.|.+...|..|++.
T Consensus         2 ~~C~~C-------~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDAC-------DKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTT-------TBBBSSHHHHHCCTTS
T ss_pred             CCcccC-------CCCcCCHHHHHHHHcc
Confidence            456666       5666666666666554

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=82.83  E-value=0.42  Score=47.05  Aligned_cols=19  Identities=32%  Similarity=0.761  Sum_probs=9.3

Q ss_pred             cCccCcccCChHHHHHHHH
Q 010863            8 CEICNKGFQRDQNLQLHRR   26 (498)
Q Consensus         8 C~~CgK~F~~~s~L~~H~r   26 (498)
                      |=+|++.|.+..-|..|++
T Consensus        13 cwycnrefddekiliqhqk   31 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQK   31 (341)
T ss_pred             eeecccccchhhhhhhhhh
Confidence            4445555555444444443

>smart00451 ZnF_U1 U1-like zinc finger

Probab=82.07  E-value=0.98  Score=30.58  Aligned_cols=22  Identities=23%  Similarity=0.487  Sum_probs=13.2

Q ss_pred             cccCcCCccccchhHHHHHHhh
Q 010863           82 WKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        82 ~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      |.|++|++.|.....+..|++.
T Consensus         4 ~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        4 FYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             eEccccCCccCCHHHHHHHHCh
Confidence            5566666666666666666544

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2482 consensus Predicted C2H2-type Zn-finger protein [Transcription]

Probab=81.90  E-value=1.2  Score=46.06  Aligned_cols=24  Identities=33%  Similarity=0.624  Sum_probs=22.1

Q ss_pred             ccccCccCcccCChHHHHHHHHhc
Q 010863            5 RFVCEICNKGFQRDQNLQLHRRGH   28 (498)
Q Consensus         5 py~C~~CgK~F~~~s~L~~H~r~H   28 (498)
                      ++.|-+|.|.|..+..|+.|||..
T Consensus       195 r~~CLyCekifrdkntLkeHMrkK  218 (423)
T KOG2482|consen  195 RLRCLYCEKIFRDKNTLKEHMRKK  218 (423)
T ss_pred             hheeeeeccccCCcHHHHHHHHhc
Confidence            688999999999999999999864

>KOG2785 consensus C2H2-type Zn-finger protein [General function prediction only]

Probab=81.40  E-value=2.4  Score=44.54  Aligned_cols=155  Identities=14%  Similarity=0.174  Sum_probs=96.7

Q ss_pred             ccccCccCcccCChHHHHHHHHh--cCCCccccc-----------------------ccc-ccccCcceeCCCCCCCCCC
Q 010863            5 RFVCEICNKGFQRDQNLQLHRRG--HNLPWKLKQ-----------------------RTS-KEIRKKVYVCPEPNCVHHD   58 (498)
Q Consensus         5 py~C~~CgK~F~~~s~L~~H~r~--H~~p~~c~~-----------------------~~~-~~~~~k~y~C~~C~C~~~~   58 (498)
                      -|.|.-|...|.....-+.|+++  |.  |..+.                       ... ....+-++.|..|      
T Consensus         3 ~ftC~tC~v~F~~ad~Qr~HyKSdWHR--YNLKRkVA~lPPItaE~F~~k~~s~~~~~~~~~e~~~~~~~c~~c------   74 (390)
T KOG2785|consen    3 GFTCNTCNVEFDDADEQRAHYKSDWHR--YNLKRKVASLPPITAEEFNEKVLSDDSEKEENLEEAESVVYCEAC------   74 (390)
T ss_pred             cceeeceeeeeccHHHHHHHhhhhHHH--hhHHhHhhcCCCcCHHHHhHHHhhhhhhhhhhhhhcccceehHHh------
Confidence            48999999999998877888775  43  11110                       011 2345678999999      


Q ss_pred             CCCccCChhhHhhhhhhccC-----------------Ccccc-------------cCcCCccccchhHHHHHHh------
Q 010863           59 PSRALGDLTGIKKHFCRKHG-----------------EKKWK-------------CDKCSKRYAVQSDWKAHSK------  102 (498)
Q Consensus        59 ~~k~F~~~s~Lk~H~r~Htg-----------------ekp~~-------------C~~CgK~F~~~s~L~~H~r------  102 (498)
                       .|.|.....-..|+.....                 .+...             +..|-..+........+..      
T Consensus        75 -~k~~~s~~a~~~hl~Sk~h~~~~~~~~r~~e~d~a~~~q~~~~~p~~l~~~~e~e~~~~E~~~~~d~~~e~~~dd~~Ed  153 (390)
T KOG2785|consen   75 -NKSFASPKAHENHLKSKKHVENLSNHQRSEEGDSAKISQLPSRRPSNLQNKGESELKWYEVDSDEDSSEEEEEDDEEED  153 (390)
T ss_pred             -hccccChhhHHHHHHHhhcchhhhhhhccccccchhhhhccccCccccccCCCcccchhhcccccccchhhccCcchhh
Confidence             8999998888888763210                 01122             2223222222222222211      


Q ss_pred             h--hC-----CCceecC-CCCccCChHHHHHHHHHhhhcccccccccc------------CCCCCCCCCCC---CCCCCC
Q 010863          103 T--CG-----TREYRCD-CGTLFSRRDSFITHRAFCDALAEESTRAIT------------GTNPILSSSSH---HQPGIV  159 (498)
Q Consensus       103 ~--hg-----ekpy~C~-Cgk~F~~~s~L~~H~~~h~~~~~~s~r~h~------------~~kp~~C~~C~---~sf~~~  159 (498)
                      +  -+     .-|-.|- |++.|..-..-.+||..+|+..-+...--+            -..-+.|-.|+   +.|.+.
T Consensus       154 i~~d~~~e~e~~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sl  233 (390)
T KOG2785|consen  154 IEEDGDDEDELIPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSL  233 (390)
T ss_pred             hhhccchhcccCCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCccccc
Confidence            1  11     1246688 999999999999999988875433211111            12357888888   999999


Q ss_pred             Ccccccccc
Q 010863          160 AGASSHVNL  168 (498)
Q Consensus       160 s~l~sH~~~  168 (498)
                      ...+.||..
T Consensus       234 eavr~HM~~  242 (390)
T KOG2785|consen  234 EAVRAHMRD  242 (390)
T ss_pred             HHHHHHHhh
Confidence            999999864

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=80.63  E-value=1.3  Score=28.36  Aligned_cols=19  Identities=21%  Similarity=0.663  Sum_probs=9.6

Q ss_pred             ccCcCCccccchhHHHHHHh
Q 010863           83 KCDKCSKRYAVQSDWKAHSK  102 (498)
Q Consensus        83 ~C~~CgK~F~~~s~L~~H~r  102 (498)
                      .|++|++.| ..+.|.+|++
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            455555555 3444555543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	498
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-07
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		3e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 22/124 (17%)
Query: 6   FVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGD 65
           + C  C K F +  NL+ H+R H               +K Y CPE         ++   
Sbjct: 78  YKCPECGKSFSQRANLRAHQRTH-------------TGEKPYACPECG-------KSFSQ 117
Query: 66  LTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRC-DCGTLFSRRDSF 123
           L  ++ H     GEK +KC +C K ++ + +   H +T  G + Y+C +CG  FSRRD+ 
Sbjct: 118 LAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDAL 177
Query: 124 ITHR 127
             H+
Sbjct: 178 NVHQ 181

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 45  KVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT- 103
           K Y CPE         ++    + ++KH     GEK +KC +C K ++  SD + H +T 
Sbjct: 3   KPYKCPECG-------KSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTH 55
Query: 104 CGTREYRC-DCGTLFSRRDSFITHR 127
            G + Y+C +CG  FSR D    H+
Sbjct: 56  TGEKPYKCPECGKSFSRSDHLSRHQ 80

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	498
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	5e-08
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	5e-05
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-06
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	7e-06
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	4e-06
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-05
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	7e-06
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-05
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-05
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	7e-04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-05
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	8e-05
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-04
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-04
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	7e-04
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-04
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	8e-04
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	5e-04

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 50.6 bits (122), Expect = 5e-08
 Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 26/128 (20%)

Query: 6   FVCE--ICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRAL 63
           F+C    CNK + +  +LQ+H R H          + E   K Y C   +C      R  
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKH----------TGE---KPYQCDFKDC-----ERRF 48

Query: 64  GDLTGIKKHFCRKH-GEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRC---DCGTLFS 118
                +K+H  R+H G K ++C  C ++++     K H++T  G + + C    C   F+
Sbjct: 49  SRSDQLKRHQ-RRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFA 107

Query: 119 RRDSFITH 126
           R D  + H
Sbjct: 108 RSDELVRH 115

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 41.7 bits (99), Expect = 5e-05
 Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 11/88 (12%)

Query: 45  KVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKH-GEKKWKCDK--CSKRYAVQSDWKAHS 101
           + ++C  P C     ++    L+ ++ H  RKH GEK ++CD   C +R++     K H 
Sbjct: 5   RPFMCAYPGC-----NKRYFKLSHLQMH-SRKHTGEKPYQCDFKDCERRFSRSDQLKRHQ 58

Query: 102 KT-CGTREYRCD-CGTLFSRRDSFITHR 127
           +   G + ++C  C   FSR D   TH 
Sbjct: 59  RRHTGVKPFQCKTCQRKFSRSDHLKTHT 86

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 47.2 bits (113), Expect = 1e-06
 Identities = 30/96 (31%), Positives = 41/96 (42%), Gaps = 21/96 (21%)

Query: 11  CNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIK 70
           C K + R +NL+ H R H          + E   K Y+C    C     S+A  + +   
Sbjct: 75  CRKSYSRLENLKTHLRSH----------TGE---KPYMCEHEGC-----SKAFSNASDRA 116

Query: 71  KHFCRKH-GEKKWKCDK--CSKRYAVQSDWKAHSKT 103
           KH  R H  EK + C    C+KRY   S  + H KT
Sbjct: 117 KHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKT 152

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 45.3 bits (108), Expect = 7e-06
 Identities = 28/126 (22%), Positives = 42/126 (33%), Gaps = 20/126 (15%)

Query: 8   CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLT 67
            + C++ F   + L  H           +       +K +VC           R      
Sbjct: 6   WDGCSQEFDSQEQLVHHIN--------SEHI--HGERKEFVCHW--GGCSRELRPFKAQY 53

Query: 68  GIKKHFCRKH-GEKKWKCD--KCSKRYAVQSDWKAHSKT-CGTREYRC---DCGTLFSRR 120
            +  H  R+H GEK  KC    C K Y+   + K H ++  G + Y C    C   FS  
Sbjct: 54  MLVVHM-RRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNA 112

Query: 121 DSFITH 126
                H
Sbjct: 113 SDRAKH 118

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 44.5 bits (106), Expect = 4e-06
 Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 11/97 (11%)

Query: 36  QRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKH-GEKKWKC--DKCSKRYA 92
                  +++++ C  P C     ++     + +K H  R H GEK +KC  + C  R+A
Sbjct: 5   SSGPDLEKRRIHYCDYPGC-----TKVYTKSSHLKAHL-RTHTGEKPYKCTWEGCDWRFA 58

Query: 93  VQSDWKAHSKT-CGTREYRCD-CGTLFSRRDSFITHR 127
              +   H +   G + ++C  C   FSR D    H 
Sbjct: 59  RSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHM 95

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 42.2 bits (100), Expect = 3e-05
 Identities = 22/101 (21%), Positives = 37/101 (36%), Gaps = 22/101 (21%)

Query: 6   FVCEI--CNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRAL 63
             C+   C K + +  +L+ H R H          + E   K Y C    C         
Sbjct: 16  HYCDYPGCTKVYTKSSHLKAHLRTH----------TGE---KPYKCTWEGC-----DWRF 57

Query: 64  GDLTGIKKHFCRKH-GEKKWKCDKCSKRYAVQSDWKAHSKT 103
                + +H+ RKH G K ++C  C++ ++       H K 
Sbjct: 58  ARSDELTRHY-RKHTGAKPFQCGVCNRSFSRSDHLALHMKR 97

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 44.4 bits (106), Expect = 7e-06
 Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 10/89 (11%)

Query: 42  IRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHS 101
           +  +   CP   C     ++   D + ++KH    HG +   C +C K +   S  K H 
Sbjct: 1   MEPRTIACPHKGC-----TKMFRDNSAMRKH-LHTHGPRVHVCAECGKAFVESSKLKRHQ 54

Query: 102 KT-CGTREYRC---DCGTLFSRRDSFITH 126
               G + ++C    CG  FS   +  TH
Sbjct: 55  LVHTGEKPFQCTFEGCGKRFSLDFNLRTH 83

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 40.6 bits (96), Expect = 2e-04
 Identities = 29/126 (23%), Positives = 54/126 (42%), Gaps = 29/126 (23%)

Query: 8   CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLT 67
            + C K F+ +  ++ H   H                +V+VC E  C      +A  + +
Sbjct: 10  HKGCTKMFRDNSAMRKHLHTHG--------------PRVHVCAE--C-----GKAFVESS 48

Query: 68  GIKKHFCRKH-GEKKWKC--DKCSKRYAVQSDWKAHSKT-CGTREYRC---DCGTLFSRR 120
            +K+H    H GEK ++C  + C KR+++  + + H +   G R Y C    C   F++ 
Sbjct: 49  KLKRHQ-LVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQS 107

Query: 121 DSFITH 126
            +  +H
Sbjct: 108 TNLKSH 113

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 41.8 bits (99), Expect = 2e-05
 Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 5/58 (8%)

Query: 75  RKH-GEKKWKCDKCSKRYAVQSDWKAHSKTC---GTREYRC-DCGTLFSRRDSFITHR 127
               GE  ++C  CS+ Y   S++  H  T      + Y C  C   F+R+D+   H 
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 44.1 bits (105), Expect = 3e-05
 Identities = 31/131 (23%), Positives = 39/131 (29%), Gaps = 28/131 (21%)

Query: 6   FVCE--ICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRAL 63
           F C+   C KGF    +L  H   H          + E   K + C    C         
Sbjct: 43  FPCKEEGCEKGFTSLHHLTRHSLTH----------TGE---KNFTCDSDGC-----DLRF 84

Query: 64  GDLTGIKKHFCRKHGEKKW--KCDK--CSKRYAVQSDWKAHSKT-CGTREYRC---DCGT 115
                +KKHF R H  K     C    C K +   +  K H  +      Y C    C  
Sbjct: 85  TTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDK 144

Query: 116 LFSRRDSFITH 126
            FS       H
Sbjct: 145 RFSLPSRLKRH 155

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 39.9 bits (94), Expect = 7e-04
 Identities = 30/134 (22%), Positives = 48/134 (35%), Gaps = 32/134 (23%)

Query: 5   RFVCEI--CNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRA 62
           R++C    C   + ++  LQ H   H          + E   K + C E  C      + 
Sbjct: 12  RYICSFADCGAAYNKNWKLQAHLCKH----------TGE---KPFPCKEEGC-----EKG 53

Query: 63  LGDLTGIKKHFCRKH-GEKKWKCD--KCSKRYAVQSDWKAHSKTCGTRE----YRC---D 112
              L  + +H    H GEK + CD   C  R+  +++ K H            Y C   +
Sbjct: 54  FTSLHHLTRHS-LTHTGEKNFTCDSDGCDLRFTTKANMKKHFNR-FHNIKICVYVCHFEN 111

Query: 113 CGTLFSRRDSFITH 126
           CG  F + +    H
Sbjct: 112 CGKAFKKHNQLKVH 125

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 41.7 bits (99), Expect = 3e-05
 Identities = 19/95 (20%), Positives = 27/95 (28%), Gaps = 21/95 (22%)

Query: 6   FVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGD 65
           F C IC + F R  +L  H R H          + E   K + C    C      R    
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTH----------TGE---KPFACDI--C-----GRKFAR 43

Query: 66  LTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAH 100
               K+H            DK  +  +     +  
Sbjct: 44  SDERKRHR-DIQHILPILEDKVEELLSKNYHLENE 77

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 41.3 bits (98), Expect = 3e-05
 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 9/86 (10%)

Query: 45  KVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKH-GEKKWKCDKCSKRYAVQSDWKAHSKT 103
           + Y CP  +C      R       + +H  R H G+K ++C  C + ++       H +T
Sbjct: 3   RPYACPVESC-----DRRFSQSGSLTRH-IRIHTGQKPFQCRICMRNFSRSDHLTTHIRT 56

Query: 104 -CGTREYRCD-CGTLFSRRDSFITHR 127
             G + + CD CG  F+R D    H 
Sbjct: 57  HTGEKPFACDICGRKFARSDERKRHT 82

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 40.9 bits (97), Expect = 4e-05
 Identities = 10/57 (17%), Positives = 21/57 (36%), Gaps = 3/57 (5%)

Query: 75  RKH-GEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTLFSRRDSFITHRA 128
                    KC +CS   + ++  + H +  C  R ++C+ C     +  +   H  
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK 58

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 40.2 bits (95), Expect = 8e-05
 Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 6/62 (9%)

Query: 70  KKHFCRKH-GEKKWKCDKCSKRYAVQSDWKAHSKT---CGTREYRCD-CGTLFSRRDSFI 124
                R H GEK ++C  C  R+      K H          ++ C  C T+ +R+    
Sbjct: 4   GSSG-RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 125 TH 126
            H
Sbjct: 63  VH 64

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 20/96 (20%), Positives = 35/96 (36%), Gaps = 20/96 (20%)

Query: 8   CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLT 67
            E C K F++   L++H+  H          +++     Y CP   C      +     +
Sbjct: 6   FENCGKAFKKHNQLKVHQFSH----------TQQ---LPYECPHEGC-----DKRFSLPS 47

Query: 68  GIKKHFCRKH-GEKKWKCDKCSKRYAVQSDWKAHSK 102
            +K+H  + H G    K D CS      + +  H  
Sbjct: 48  RLKRHE-KVHAGYPCKKDDSCSFVGKTWTLYLKHVA 82

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 38.9 bits (91), Expect = 2e-04
 Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 5/55 (9%)

Query: 78  GEKKWKCDKCSKRYAVQSDWKAHSKT----CGTREYRCD-CGTLFSRRDSFITHR 127
           G    +C+ C      ++    H +          + C+ CG  F + DS   HR
Sbjct: 4   GSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHR 58

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 37.4 bits (87), Expect = 7e-04
 Identities = 14/98 (14%), Positives = 22/98 (22%), Gaps = 45/98 (45%)

Query: 6   FVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGD 65
             CEIC    ++  +L  H+R H                                     
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHA------------------------------------ 31

Query: 66  LTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT 103
                          ++ C+ C KR+       AH   
Sbjct: 32  ---------ETVAALRFPCEFCGKRFEKPDSVAAHRSK 60

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 29/109 (26%), Positives = 39/109 (35%), Gaps = 23/109 (21%)

Query: 8   CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLT 67
           C    K F+    L  H R H          + E   K + CP P C      +      
Sbjct: 65  CPREGKSFKAKYKLVNHIRVH----------TGE---KPFPCPFPGC-----GKIFARSE 106

Query: 68  GIKKHFCRKH-GEKKWKC--DKCSKRYAVQSDWKAHSKT-CGTREYRCD 112
            +K H  R H GEK +KC  + C +R+A  SD K H       +     
Sbjct: 107 NLKIHK-RTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 39.2 bits (92), Expect = 8e-04
 Identities = 28/129 (21%), Positives = 42/129 (32%), Gaps = 21/129 (16%)

Query: 6   FVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPS-RALG 64
              + C++ F     L  H                   +  +VC    C     S +A  
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTME---------HVGGPEQNNHVCYWEECPREGKSFKAKY 76

Query: 65  DLTGIKKHFCRKH-GEKKWKCDK--CSKRYAVQSDWKAHSKT-CGTREYRC---DCGTLF 117
            L     H  R H GEK + C    C K +A   + K H +T  G + ++C    C   F
Sbjct: 77  KL---VNHI-RVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRF 132

Query: 118 SRRDSFITH 126
           +       H
Sbjct: 133 ANSSDRKKH 141

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 37.9 bits (89), Expect = 5e-04
 Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 20/97 (20%)

Query: 8   CEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLT 67
              C K + +  +L+ H R H          + E   K Y C    C             
Sbjct: 10  YAGCGKTYTKSSHLKAHLRTH----------TGE---KPYHCDWDGC-----GWKFARSD 51

Query: 68  GIKKHFCRKH-GEKKWKCDKCSKRYAVQSDWKAHSKT 103
            + +H+ RKH G + ++C KC + ++       H K 
Sbjct: 52  ELTRHY-RKHTGHRPFQCQKCDRAFSRSDHLALHMKR 87

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	498
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.92
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.91
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.89
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.89
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.87
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.87
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.86
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.85
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.85
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.84
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.8
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.79
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.78
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.78
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.75
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.74
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.72
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.7
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.69
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.69
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.69
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.68
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.67
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.67
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.66
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.65
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.65
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.64
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.63
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.63
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.62
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.61
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.59
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.59
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.56
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.55
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.55
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.55
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.55
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.54
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.53
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.49
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.47
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.47
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.46
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.45
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.43
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.42
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.42
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.41
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.4
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.38
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.37
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.37
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.36
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.35
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.34
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.31
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.29
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.29
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.28
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.28
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.27
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.27
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.27
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.24
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.23
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.23
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.22
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.22
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.21
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.19
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.18
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.16
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.15
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.14
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.11
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.08
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.08
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.06
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.05
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.03
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.02
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.93
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.92
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.92
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.91
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.91
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.91
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.91
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.9
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.9
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.9
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.9
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.9
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.9
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.9
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.9
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.89
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.89
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.89
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.89
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.89
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.89
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.89
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.88
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.88
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.88
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.88
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.88
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.88
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.88
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.88
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.88
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.87
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.87
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.86
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.86
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.86
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.85
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.85
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.85
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.84
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.84
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.84
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.83
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.83
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.82
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.8
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.8
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.8
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.8
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.8
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.79
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.79
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.79
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.79
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.79
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.79
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.78
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.78
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.78
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.78
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.78
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.78
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.78
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.78
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.78
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.78
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.78
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.78
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.78
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.78
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.77
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.77
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.77
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.77
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.77
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.77
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.77
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.77
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.77
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.77
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.77
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.77
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.77
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.77
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.76
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.76
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.76
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.76
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.76
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.76
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.76
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.76
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.76
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.76
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.76
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.75
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.75
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.75
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.75
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.75
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.75
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.75
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.75
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.75
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.75
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.75
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.75
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.75
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.75
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.75
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.75
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.74
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.74
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.74
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.74
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.73
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.73
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.73
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.73
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.73
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.73
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.73
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.73
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.72
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.72
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.72
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.72
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.72
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.72
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.71
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.71
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.71
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.71
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.71
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.7
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.7
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.7
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.69
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.69
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.69
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.69
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.69
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.69
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.68
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.67
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.67
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.67
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.66
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.6
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.6
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.59
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.59
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.59
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.59
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.59
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.58
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.58
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.58
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.58
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.58
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.58
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.58
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.58
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.58
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.58
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.58
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.57
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.57
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.57
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.57
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.56
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.56
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.56
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.56
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.56
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.55
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.55
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.55
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.55
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.55
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.54
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.54
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.53
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.53
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.52
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.52
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.52
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.52
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.51
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.51
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.51
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.51
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.51
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.5
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.5
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.5
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.48
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.48
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.48
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.47
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.47
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.46
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.44
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.41
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.4
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.39
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.37
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.31
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.28
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.22
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.2
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.18
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.14
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.13
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.13
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.11
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.08
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.05
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.05
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.02
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.02
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.02
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.0
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.0
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.99
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.97
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	97.97
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.96
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.93
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	97.92
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.92
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	97.91
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	97.9
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.9
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.89
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	97.89
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.89
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.89
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.87
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.85
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.84
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.84
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.84
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.82
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.82
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.81
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.81
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.79
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.77
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.77
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.76
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.95
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.75
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.91
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.72
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.72
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.71
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.71
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.68
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.83
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.64
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.63
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.58
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.57
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.52
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.49
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.42
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.38
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.38
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.33
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.32
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.31
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.31
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.29
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.23
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.3
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.29
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.14
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.14
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.1
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.09
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.09
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.8
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	95.76
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	96.47
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.38
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.27
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.81
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	94.75
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.74
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	93.15
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	91.86
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	91.0
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	90.72

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.92  E-value=4.7e-26  Score=212.55  Aligned_cols=151  Identities=28%  Similarity=0.591  Sum_probs=115.8

Q ss_pred             CCCccccCccCcccCChHHHHHHHHhcC--CCccccc-------------cccccccCcceeCCCCCCCCCCCCCccCCh
Q 010863            2 ATNRFVCEICNKGFQRDQNLQLHRRGHN--LPWKLKQ-------------RTSKEIRKKVYVCPEPNCVHHDPSRALGDL   66 (498)
Q Consensus         2 gekpy~C~~CgK~F~~~s~L~~H~r~H~--~p~~c~~-------------~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~   66 (498)
                      ++++|+|++|++.|.....|..|+++|.  .++.|..             +...+.++++|.|++|       ++.|...
T Consensus        18 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C-------~~~f~~~   90 (190)
T 2i13_A           18 GEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPEC-------GKSFSQR   90 (190)
T ss_dssp             -------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTT-------CCEESCH
T ss_pred             CCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCccc-------CCccCCH
Confidence            5678888888888888888888888886  4555543             2334457788999998       8999999


Q ss_pred             hhHhhhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-CCCccCChHHHHHHHHHhhhccccccccccCC
Q 010863           67 TGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTLFSRRDSFITHRAFCDALAEESTRAITGT  144 (498)
Q Consensus        67 s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-Cgk~F~~~s~L~~H~~~h~~~~~~s~r~h~~~  144 (498)
                      ..|..|++.|+++++|.|++|++.|.....|..|+++ +++++|.|+ |++.|..+..|.+|+           ++|.++
T Consensus        91 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~-----------~~H~~~  159 (190)
T 2i13_A           91 ANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQ-----------RTHTGE  159 (190)
T ss_dssp             HHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHH-----------HHHHCC
T ss_pred             HHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHH-----------HhcCCC
Confidence            9999999999999999999999999999999999988 788899999 999999999999998           556678


Q ss_pred             CCCCCCCCCCCCCCCCcccccccccC
Q 010863          145 NPILSSSSHHQPGIVAGASSHVNLQI  170 (498)
Q Consensus       145 kp~~C~~C~~sf~~~s~l~sH~~~~~  170 (498)
                      ++|.|..|++.|.....|..|++.|.
T Consensus       160 ~~~~C~~C~~~f~~~~~L~~H~~~H~  185 (190)
T 2i13_A          160 KPYKCPECGKSFSRRDALNVHQRTHT  185 (190)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHTTC-
T ss_pred             CCeECCCCCCccCCHHHHHHHHHhcC
Confidence            99999999999999999999988774

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.91  E-value=1.7e-25  Score=208.71  Aligned_cols=134  Identities=23%  Similarity=0.471  Sum_probs=100.3

Q ss_pred             HHHHHHHHhcC--CCccccc-------------cccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccc
Q 010863           19 QNLQLHRRGHN--LPWKLKQ-------------RTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWK   83 (498)
Q Consensus        19 s~L~~H~r~H~--~p~~c~~-------------~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~   83 (498)
                      ..|..|++.|.  ++|.|..             +...+.++++|.|++|       ++.|.....|.+|++.|+++++|.
T Consensus         7 ~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~   79 (190)
T 2i13_A            7 SSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPEC-------GKSFSDKKDLTRHQRTHTGEKPYK   79 (190)
T ss_dssp             ------------------------CCSSHHHHHGGGCC---CCEECTTT-------CCEESSHHHHHHHHHHHHCCCCEE
T ss_pred             ccchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCc-------CchhCCHHHHHHHHHhcCCCCCcc
Confidence            56888988887  5666653             3445567788999998       899999999999999999999999


Q ss_pred             cCcCCccccchhHHHHHHhh-hCCCceecC-CCCccCChHHHHHHHHHhhhccccccccccCCCCCCCCCCCCCCCCCCc
Q 010863           84 CDKCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTLFSRRDSFITHRAFCDALAEESTRAITGTNPILSSSSHHQPGIVAG  161 (498)
Q Consensus        84 C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-Cgk~F~~~s~L~~H~~~h~~~~~~s~r~h~~~kp~~C~~C~~sf~~~s~  161 (498)
                      |++|++.|.....|..|+++ +++++|.|+ |++.|.....|..|+           ++|.++++|.|..|++.|.....
T Consensus        80 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-----------~~h~~~~~~~C~~C~~~f~~~~~  148 (190)
T 2i13_A           80 CPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQ-----------RTHTGEKPYKCPECGKSFSREDN  148 (190)
T ss_dssp             CTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHH-----------HHHHCCCCEECTTTCCEESCHHH
T ss_pred             CcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHH-----------HHhCCCCCeECCCCCcccCCHHH
Confidence            99999999999999999988 788899999 999999999999998           55667899999999999999999


Q ss_pred             ccccccccC
Q 010863          162 ASSHVNLQI  170 (498)
Q Consensus       162 l~sH~~~~~  170 (498)
                      |..|++.|.
T Consensus       149 L~~H~~~H~  157 (190)
T 2i13_A          149 LHTHQRTHT  157 (190)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHhcC
Confidence            999998875

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.89  E-value=4.8e-24  Score=191.75  Aligned_cols=143  Identities=23%  Similarity=0.418  Sum_probs=129.9

Q ss_pred             CCccccCccCcccCChHHHHHHHH---hcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCC
Q 010863            3 TNRFVCEICNKGFQRDQNLQLHRR---GHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGE   79 (498)
Q Consensus         3 ekpy~C~~CgK~F~~~s~L~~H~r---~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htge   79 (498)
                      |.+|+|++|++.|.+...|..|++   +|.             ++++|.|++|+|  ..|++.|.....|.+|+++|+++
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~h~-------------~~~~~~C~~c~C--~~c~~~f~~~~~l~~H~~~h~~~   65 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHG-------------ERKEFVCHWGGC--SRELRPFKAQYMLVVHMRRHTGE   65 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHHHTSSS-------------CSSCCCCCBTTC--TTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHhhccCC-------------CCcceeCCCCCc--cchhhhhhhHHHHHHHHHhcCCC
Confidence            568999999999999999999998   454             789999998765  23359999999999999999999


Q ss_pred             cccccCc--CCccccchhHHHHHHhh-hCCCceecC---CCCccCChHHHHHHHHHhhhccccccccccCCCCCCCCC--
Q 010863           80 KKWKCDK--CSKRYAVQSDWKAHSKT-CGTREYRCD---CGTLFSRRDSFITHRAFCDALAEESTRAITGTNPILSSS--  151 (498)
Q Consensus        80 kp~~C~~--CgK~F~~~s~L~~H~r~-hgekpy~C~---Cgk~F~~~s~L~~H~~~h~~~~~~s~r~h~~~kp~~C~~--  151 (498)
                      ++|.|.+  |++.|.....|..|+++ +++++|.|+   |++.|.++..|.+|++          ++|.++++|.|..  
T Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~----------~~H~~~~~~~C~~~~  135 (155)
T 2gli_A           66 KPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQN----------RTHSNEKPYVCKLPG  135 (155)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHH----------HTTCSCCCEECCSTT
T ss_pred             CCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHH----------HhcCCCCCeeCCCCC
Confidence            9999986  99999999999999999 789999998   9999999999999983          5677899999998  


Q ss_pred             CCCCCCCCCcccccccccC
Q 010863          152 SHHQPGIVAGASSHVNLQI  170 (498)
Q Consensus       152 C~~sf~~~s~l~sH~~~~~  170 (498)
                      |++.|.....|..|++.++
T Consensus       136 C~~~f~~~~~L~~H~~~hh  154 (155)
T 2gli_A          136 CTKRYTDPSSLRKHVKTVH  154 (155)
T ss_dssp             TCCEESSHHHHHHHHHHSC
T ss_pred             CccccCCHHHHHHHHHhhc
Confidence            9999999999999998764

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.89  E-value=2e-23  Score=194.64  Aligned_cols=139  Identities=21%  Similarity=0.472  Sum_probs=128.3

Q ss_pred             CCCcccc--CccCcccCChHHHHHHHHhcCCCccccccccccccCcceeC--CCCCCCCCCCCCccCChhhHhhhhhhcc
Q 010863            2 ATNRFVC--EICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVC--PEPNCVHHDPSRALGDLTGIKKHFCRKH   77 (498)
Q Consensus         2 gekpy~C--~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C--~~C~C~~~~~~k~F~~~s~Lk~H~r~Ht   77 (498)
                      .+++|+|  ++|++.|.....|..|+++|.             ++++|.|  +.|       ++.|.....|.+|+++|+
T Consensus         9 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~-------------~~~~~~C~~~~C-------~~~f~~~~~l~~H~~~h~   68 (190)
T 1tf6_A            9 VYKRYICSFADCGAAYNKNWKLQAHLCKHT-------------GEKPFPCKEEGC-------EKGFTSLHHLTRHSLTHT   68 (190)
T ss_dssp             -CCCCBCSSTTTCCBCSSHHHHHHHHHHHH-------------CCCSSCCSSTTC-------CCCCSSHHHHHHHHTTTT
T ss_pred             CCcceeCCCCCCcchhCCHHHHHHHHHhcC-------------CCCCccCCCCCC-------ChhhCCHHHHHHHHHHcc
Confidence            4689999  689999999999999999998             8899999  778       899999999999999999


Q ss_pred             CCcccccC--cCCccccchhHHHHHHhh-h--CCCceec--C-CCCccCChHHHHHHHHHhhhccccccccccCCCCCCC
Q 010863           78 GEKKWKCD--KCSKRYAVQSDWKAHSKT-C--GTREYRC--D-CGTLFSRRDSFITHRAFCDALAEESTRAITGTNPILS  149 (498)
Q Consensus        78 gekp~~C~--~CgK~F~~~s~L~~H~r~-h--gekpy~C--~-Cgk~F~~~s~L~~H~~~h~~~~~~s~r~h~~~kp~~C  149 (498)
                      ++++|.|+  .|++.|.....|..|++. |  ++++|.|  + |++.|.....|..|+           ++|.+++||.|
T Consensus        69 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~-----------~~H~~~~~~~C  137 (190)
T 1tf6_A           69 GEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQ-----------FSHTQQLPYEC  137 (190)
T ss_dssp             TCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHH-----------GGGSSSCSSBC
T ss_pred             CCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHH-----------HHhCCCCCccC
Confidence            99999999  899999999999999955 6  5789999  8 999999999999999           67888999999


Q ss_pred             CC--CCCCCCCCCcccccccccCC
Q 010863          150 SS--SHHQPGIVAGASSHVNLQIP  171 (498)
Q Consensus       150 ~~--C~~sf~~~s~l~sH~~~~~p  171 (498)
                      ..  |++.|.....|..|++.|..
T Consensus       138 ~~~~C~k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A          138 PHEGCDKRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             CSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred             CCCCCCchhcCHHHHHHHHHHhCC
Confidence            88  99999999999999998753

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.87  E-value=3.3e-22  Score=172.56  Aligned_cols=110  Identities=21%  Similarity=0.509  Sum_probs=104.0

Q ss_pred             CCCCccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhh---cc
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCR---KH   77 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~---Ht   77 (498)
                      +++++|+|++|++.|.....|..|+++|.             ++++|.|++|       ++.|.....|.+|++.   |.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~~~~~~   62 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHT-------------GEKPFECPKC-------GKCYFRKENLLEHEARNCMNR   62 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHS-------------SCCSCBCTTT-------CCBCSSHHHHHHHHHHCCCCS
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCC-------------CCCCeECCCC-------CchhcCHHHHHHHHhhhhcCC
Confidence            47899999999999999999999999998             8899999999       8999999999999985   57


Q ss_pred             CCcccccCcCCccccchhHHHHHHhh-hCCCceecC-CCCccCChHHHHHHHHHh
Q 010863           78 GEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTLFSRRDSFITHRAFC  130 (498)
Q Consensus        78 gekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-Cgk~F~~~s~L~~H~~~h  130 (498)
                      ++++|.|++|++.|.....|..|+++ +++++|.|+ |++.|.++..|.+|++.+
T Consensus        63 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  117 (124)
T 2dlq_A           63 SEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKL  117 (124)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHT
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHH
Confidence            89999999999999999999999999 799999999 999999999999999643

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.87  E-value=2.9e-22  Score=171.97  Aligned_cols=110  Identities=28%  Similarity=0.678  Sum_probs=104.5

Q ss_pred             CCCCccccCc--cCcccCChHHHHHHHHhcCCCccccccccccccCcceeCC--CCCCCCCCCCCccCChhhHhhhhhhc
Q 010863            1 MATNRFVCEI--CNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCP--EPNCVHHDPSRALGDLTGIKKHFCRK   76 (498)
Q Consensus         1 ~gekpy~C~~--CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~--~C~C~~~~~~k~F~~~s~Lk~H~r~H   76 (498)
                      +++++|+|.+  |++.|.....|..|+++|.             ++++|.|+  .|       ++.|.....|..|+++|
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~~~C-------~~~f~~~~~l~~H~~~h   61 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHT-------------GEKPYQCDFKDC-------ERRFSRSDQLKRHQRRH   61 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHH-------------TTCCEECCSTTC-------CCEESSHHHHHHHHHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhC-------------CCCCccCCCCCC-------cCccCCHHHHHHHHHHc
Confidence            4789999997  9999999999999999998             78999999  68       89999999999999999


Q ss_pred             cCCcccccCcCCccccchhHHHHHHhh-hCCCceec--C-CCCccCChHHHHHHHHHh
Q 010863           77 HGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRC--D-CGTLFSRRDSFITHRAFC  130 (498)
Q Consensus        77 tgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C--~-Cgk~F~~~s~L~~H~~~h  130 (498)
                      +++++|.|++|++.|.....|..|+++ +++++|.|  + |++.|.++..|.+|+++|
T Consensus        62 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           62 TGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             CCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            999999999999999999999999999 79999999  7 999999999999999654

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.86  E-value=5.2e-22  Score=185.07  Aligned_cols=135  Identities=22%  Similarity=0.366  Sum_probs=125.2

Q ss_pred             CCCcccc--CccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCC--CCCCCCCCCCCccCChhhHhhhh-hhc
Q 010863            2 ATNRFVC--EICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCP--EPNCVHHDPSRALGDLTGIKKHF-CRK   76 (498)
Q Consensus         2 gekpy~C--~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~--~C~C~~~~~~k~F~~~s~Lk~H~-r~H   76 (498)
                      ++++|+|  ++|++.|.....|..|+++|.             ++++|.|+  .|       ++.|.....|.+|+ +.|
T Consensus        39 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~~~C-------~~~f~~~~~l~~H~~~~h   98 (190)
T 1tf6_A           39 GEKPFPCKEEGCEKGFTSLHHLTRHSLTHT-------------GEKNFTCDSDGC-------DLRFTTKANMKKHFNRFH   98 (190)
T ss_dssp             CCCSSCCSSTTCCCCCSSHHHHHHHHTTTT-------------TCCCEECCSSSC-------CCEESCHHHHHHHHHTTS
T ss_pred             CCCCccCCCCCCChhhCCHHHHHHHHHHcc-------------CCCceeCCCCCC-------CCccCCHHHHHHHHHHhc
Confidence            6789999  899999999999999999998             88999999  77       99999999999999 667


Q ss_pred             -cCCccccc--CcCCccccchhHHHHHHhh-hCCCceec--C-CCCccCChHHHHHHHHHhhhccccccccccCCCCCCC
Q 010863           77 -HGEKKWKC--DKCSKRYAVQSDWKAHSKT-CGTREYRC--D-CGTLFSRRDSFITHRAFCDALAEESTRAITGTNPILS  149 (498)
Q Consensus        77 -tgekp~~C--~~CgK~F~~~s~L~~H~r~-hgekpy~C--~-Cgk~F~~~s~L~~H~~~h~~~~~~s~r~h~~~kp~~C  149 (498)
                       .++++|.|  ++|++.|.....|+.|+++ +++++|.|  + |++.|.++..|.+|+           ++|.+   |.|
T Consensus        99 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~-----------~~H~~---~~C  164 (190)
T 1tf6_A           99 NIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHE-----------KVHAG---YPC  164 (190)
T ss_dssp             STTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHH-----------TSSCS---CCC
T ss_pred             CCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHH-----------HHhCC---CcC
Confidence             47889999  8999999999999999999 78999999  5 999999999999999           66665   899


Q ss_pred             CC---CCCCCCCCCcccccccccC
Q 010863          150 SS---SHHQPGIVAGASSHVNLQI  170 (498)
Q Consensus       150 ~~---C~~sf~~~s~l~sH~~~~~  170 (498)
                      ..   |++.|.....|..|++.|.
T Consensus       165 ~~~~~C~~~f~~~~~l~~H~~~h~  188 (190)
T 1tf6_A          165 KKDDSCSFVGKTWTLYLKHVAECH  188 (190)
T ss_dssp             CSTTTCCCCCSCHHHHHHHHTTCC
T ss_pred             CCCCcCCCccccHHHHHHHHHhhc
Confidence            99   9999999999999998775

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.85  E-value=1.5e-21  Score=175.86  Aligned_cols=126  Identities=21%  Similarity=0.324  Sum_probs=109.1

Q ss_pred             CCCccccCccCcccCChHHHHHHHHh-cCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCc
Q 010863            2 ATNRFVCEICNKGFQRDQNLQLHRRG-HNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEK   80 (498)
Q Consensus         2 gekpy~C~~CgK~F~~~s~L~~H~r~-H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgek   80 (498)
                      ++++|.|++|++.|.....|.+|++. |.....     ......+.|.|++|       ++.|.....|..|+++|++++
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~-----~~~~~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~   89 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPE-----QNNHVCYWEECPRE-------GKSFKAKYKLVNHIRVHTGEK   89 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTT-----CSSCCCCBTTCTTS-------SCCCSSHHHHHHHTHHHHCCC
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCcc-----cCCccccccCCCCc-------ccccCCHHHHHHHHHhcCCCC
Confidence            45789999999999999999999998 541100     00001123899999       899999999999999999999


Q ss_pred             ccccCc--CCccccchhHHHHHHhh-hCCCceecC---CCCccCChHHHHHHHHHhhhccccccccccCCCCCCCC
Q 010863           81 KWKCDK--CSKRYAVQSDWKAHSKT-CGTREYRCD---CGTLFSRRDSFITHRAFCDALAEESTRAITGTNPILSS  150 (498)
Q Consensus        81 p~~C~~--CgK~F~~~s~L~~H~r~-hgekpy~C~---Cgk~F~~~s~L~~H~~~h~~~~~~s~r~h~~~kp~~C~  150 (498)
                      +|.|.+  |++.|.....|.+|+++ +++++|.|.   |++.|.++..|.+|+           ++|.+++||.|+
T Consensus        90 ~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~-----------~~H~~~k~~~c~  154 (155)
T 2rpc_A           90 PFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHM-----------HVHTSDKSGPSS  154 (155)
T ss_dssp             SEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSS-----------TTTTSCCCSCSC
T ss_pred             cccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHH-----------HHhcCCCCCCCC
Confidence            999998  99999999999999999 789999998   999999999999999           788899999986

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.85  E-value=1.6e-21  Score=169.04  Aligned_cols=109  Identities=28%  Similarity=0.595  Sum_probs=99.5

Q ss_pred             CCCCccccC--ccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccC
Q 010863            1 MATNRFVCE--ICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHG   78 (498)
Q Consensus         1 ~gekpy~C~--~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htg   78 (498)
                      |.+++|+|+  .|++.|.....|..|+++|              ++++|.|++|       ++.|.....|..|+++|++
T Consensus         1 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h--------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~   59 (124)
T 1ubd_C            1 MEPRTIACPHKGCTKMFRDNSAMRKHLHTH--------------GPRVHVCAEC-------GKAFVESSKLKRHQLVHTG   59 (124)
T ss_dssp             ----CEECCSTTCCCEESSHHHHHHHHGGG--------------SCCCEECTTT-------CCEESSHHHHHHHGGGTSC
T ss_pred             CCCCcccCCCCCCcCccCCHHHHHHHHHHc--------------CCCCeECCCC-------CchhCCHHHHHHHHHHcCC
Confidence            568999999  8999999999999999988              4789999999       8999999999999999999


Q ss_pred             CcccccCc--CCccccchhHHHHHHhh-hCCCceec--C-CCCccCChHHHHHHHHHh
Q 010863           79 EKKWKCDK--CSKRYAVQSDWKAHSKT-CGTREYRC--D-CGTLFSRRDSFITHRAFC  130 (498)
Q Consensus        79 ekp~~C~~--CgK~F~~~s~L~~H~r~-hgekpy~C--~-Cgk~F~~~s~L~~H~~~h  130 (498)
                      +++|.|.+  |++.|.....|..|+++ +++++|.|  + |++.|.++..|.+|+++|
T Consensus        60 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  117 (124)
T 1ubd_C           60 EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH  117 (124)
T ss_dssp             CCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHH
Confidence            99999986  99999999999999999 79999999  5 999999999999999544

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.84  E-value=7.1e-22  Score=176.65  Aligned_cols=98  Identities=22%  Similarity=0.419  Sum_probs=57.4

Q ss_pred             CCCccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcc
Q 010863            2 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKK   81 (498)
Q Consensus         2 gekpy~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp   81 (498)
                      |+++|+|++|++.|.....|.+|+++|.             ++++|.|++|       ++.|.....|..|+++|+++++
T Consensus        19 Gek~y~C~~C~k~F~~~~~L~~H~~~H~-------------~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~   78 (133)
T 2lt7_A           19 GRVYYICIVCKRSYVCLTSLRRHFNIHS-------------WEKKYPCRYC-------EKVFPLAEYRTKHEIHHTGERR   78 (133)
T ss_dssp             TEEEEEETTTCCEESCHHHHHHHHHHHH-------------CCSCEECSSS-------SCEESSHHHHHHHHHHHHTCCC
T ss_pred             CCcCeECCCCCCCcCCHHHHHHHHHHcC-------------CCCCeeCCcc-------CeecccccchhhhccccCCCcc
Confidence            4555666666666666666666666555             5556666665       5666666666666666666666


Q ss_pred             cccCcCCccccchhHHHHHHhh-hCC------CceecC-CCCccCC
Q 010863           82 WKCDKCSKRYAVQSDWKAHSKT-CGT------REYRCD-CGTLFSR  119 (498)
Q Consensus        82 ~~C~~CgK~F~~~s~L~~H~r~-hge------kpy~C~-Cgk~F~~  119 (498)
                      |.|++|++.|.....|..|+++ |++      ++|.|. |++.|.+
T Consensus        79 ~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~  124 (133)
T 2lt7_A           79 YQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIR  124 (133)
T ss_dssp             EEESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCC
T ss_pred             ccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhh
Confidence            6666666666666666666655 443      235555 6555543

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.80  E-value=2.4e-20  Score=166.65  Aligned_cols=105  Identities=21%  Similarity=0.328  Sum_probs=94.9

Q ss_pred             ccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-CCCccCC
Q 010863           42 IRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTLFSR  119 (498)
Q Consensus        42 ~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-Cgk~F~~  119 (498)
                      .|+++|+|++|       ++.|.....|++|+++|+++++|.|++|++.|.....|..|+++ .++++|.|+ |++.|.+
T Consensus        18 ~Gek~y~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~   90 (133)
T 2lt7_A           18 DGRVYYICIVC-------KRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFIN   90 (133)
T ss_dssp             TTEEEEEETTT-------CCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESS
T ss_pred             CCCcCeECCCC-------CCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCC
Confidence            48999999999       99999999999999999999999999999999999999999999 799999999 9999999


Q ss_pred             hHHHHHHHHHhhhccccccccccCCCCCCCCCCCCCCCC
Q 010863          120 RDSFITHRAFCDALAEESTRAITGTNPILSSSSHHQPGI  158 (498)
Q Consensus       120 ~s~L~~H~~~h~~~~~~s~r~h~~~kp~~C~~C~~sf~~  158 (498)
                      +..|..|+++|++.     ......++|.|..|++.|..
T Consensus        91 ~~~L~~H~~~hh~~-----~p~~~~k~~~C~~C~k~~~~  124 (133)
T 2lt7_A           91 YQFMSSHIKSVHSQ-----DPSGDSKLYRLHPCRSLQIR  124 (133)
T ss_dssp             HHHHHHHHHHHTCC-----CTTSSSCCEEECCCCSSCCC
T ss_pred             HHHHHHHhHHhcCC-----CCCCCCCCeecCCCCchhhh
Confidence            99999999887642     22234678999999987754

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=7.1e-20  Score=157.82  Aligned_cols=110  Identities=25%  Similarity=0.332  Sum_probs=103.2

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhh----hCCCceecC-CCCcc
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT----CGTREYRCD-CGTLF  117 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~----hgekpy~C~-Cgk~F  117 (498)
                      ++++|+|++|       ++.|.....|.+|+++|+++++|.|++|++.|.....|..|++.    .++++|.|+ |++.|
T Consensus         4 ~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f   76 (124)
T 2dlq_A            4 GSSGVECPTC-------HKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETF   76 (124)
T ss_dssp             CCSSCCCTTT-------CCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEE
T ss_pred             CCCCCCCCCC-------CCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCcc
Confidence            6789999999       89999999999999999999999999999999999999999985    477899999 99999


Q ss_pred             CChHHHHHHHHHhhhccccccccccCCCCCCCCCCCCCCCCCCcccccccccC
Q 010863          118 SRRDSFITHRAFCDALAEESTRAITGTNPILSSSSHHQPGIVAGASSHVNLQI  170 (498)
Q Consensus       118 ~~~s~L~~H~~~h~~~~~~s~r~h~~~kp~~C~~C~~sf~~~s~l~sH~~~~~  170 (498)
                      .....|.+|+           ++|.++++|.|..|++.|.....|..|++.++
T Consensus        77 ~~~~~l~~H~-----------~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H  118 (124)
T 2dlq_A           77 RRRMELRLHM-----------VSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH  118 (124)
T ss_dssp             SSHHHHHHHH-----------HHHSSSCSEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             CCHHHHHHHH-----------HHcCCCCCccCCCccchhCCHHHHHHHHHHHC
Confidence            9999999999           56678999999999999999999999998554

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.78  E-value=6.8e-20  Score=157.07  Aligned_cols=109  Identities=27%  Similarity=0.568  Sum_probs=102.6

Q ss_pred             cCcceeCCC--CCCCCCCCCCccCChhhHhhhhhhccCCcccccC--cCCccccchhHHHHHHhh-hCCCceecC-CCCc
Q 010863           43 RKKVYVCPE--PNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCD--KCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTL  116 (498)
Q Consensus        43 ~~k~y~C~~--C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~--~CgK~F~~~s~L~~H~r~-hgekpy~C~-Cgk~  116 (498)
                      ++++|.|.+  |       ++.|.....|..|++.|+++++|.|+  .|++.|.....|..|+++ +++++|.|+ |++.
T Consensus         3 ~~~~~~C~~~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   75 (119)
T 2jp9_A            3 EKRPFMCAYPGC-------NKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRK   75 (119)
T ss_dssp             SSCCBCCCSTTS-------CCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCE
T ss_pred             CCeeeeCCCCCC-------cchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCch
Confidence            688999997  7       99999999999999999999999999  799999999999999999 799999999 9999


Q ss_pred             cCChHHHHHHHHHhhhccccccccccCCCCCCC--CCCCCCCCCCCccccccccc
Q 010863          117 FSRRDSFITHRAFCDALAEESTRAITGTNPILS--SSSHHQPGIVAGASSHVNLQ  169 (498)
Q Consensus       117 F~~~s~L~~H~~~h~~~~~~s~r~h~~~kp~~C--~~C~~sf~~~s~l~sH~~~~  169 (498)
                      |.....|.+|+           ++|.++++|.|  +.|++.|.....|..|+++|
T Consensus        76 f~~~~~l~~H~-----------~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           76 FSRSDHLKTHT-----------RTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             ESCHHHHHHHH-----------HHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             hCCHHHHHHHH-----------HHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            99999999999           55667899999  89999999999999998764

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=3e-19  Score=160.24  Aligned_cols=110  Identities=26%  Similarity=0.510  Sum_probs=101.2

Q ss_pred             CCCccccCcc-----CcccCChHHHHHHHHhcCCCccccccccccccCcceeCCC--CCCCCCCCCCccCChhhHhhhhh
Q 010863            2 ATNRFVCEIC-----NKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPE--PNCVHHDPSRALGDLTGIKKHFC   74 (498)
Q Consensus         2 gekpy~C~~C-----gK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~--C~C~~~~~~k~F~~~s~Lk~H~r   74 (498)
                      ++++|+|++|     ++.|.....|..|+++|.             ++++|.|++  |       ++.|.....|..|++
T Consensus        31 ~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~~~C-------~~~f~~~~~l~~H~~   90 (155)
T 2gli_A           31 ERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT-------------GEKPHKCTFEGC-------RKSYSRLENLKTHLR   90 (155)
T ss_dssp             CSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHH-------------CCCCCCCCSTTC-------CCCCSSHHHHHHHHH
T ss_pred             CCcceeCCCCCccchhhhhhhHHHHHHHHHhcC-------------CCCCccCCCCCC-------CCcccCHHHHHHHHH
Confidence            5789998753     499999999999999998             889999986  7       999999999999999


Q ss_pred             hccCCcccccCc--CCccccchhHHHHHH-hh-hCCCceecC---CCCccCChHHHHHHHHHhh
Q 010863           75 RKHGEKKWKCDK--CSKRYAVQSDWKAHS-KT-CGTREYRCD---CGTLFSRRDSFITHRAFCD  131 (498)
Q Consensus        75 ~Htgekp~~C~~--CgK~F~~~s~L~~H~-r~-hgekpy~C~---Cgk~F~~~s~L~~H~~~h~  131 (498)
                      +|+++++|.|++  |++.|.+...|.+|+ ++ .++++|.|+   |++.|.++..|.+|+++|+
T Consensus        91 ~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hh  154 (155)
T 2gli_A           91 SHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH  154 (155)
T ss_dssp             HTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             HcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhc
Confidence            999999999998  999999999999999 56 588999995   9999999999999997765

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.75  E-value=1.8e-18  Score=149.68  Aligned_cols=110  Identities=24%  Similarity=0.488  Sum_probs=99.4

Q ss_pred             cCcceeCC--CCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC---CCCc
Q 010863           43 RKKVYVCP--EPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD---CGTL  116 (498)
Q Consensus        43 ~~k~y~C~--~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~---Cgk~  116 (498)
                      ++++|.|+  .|       ++.|.....|.+|+++| ++++|.|.+|++.|.....|..|+++ +++++|.|.   |++.
T Consensus         2 ~~~~~~C~~~~C-------~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~   73 (124)
T 1ubd_C            2 EPRTIACPHKGC-------TKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKR   73 (124)
T ss_dssp             ---CEECCSTTC-------CCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCE
T ss_pred             CCCcccCCCCCC-------cCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCc
Confidence            46889999  78       99999999999999999 89999999999999999999999999 789999995   9999


Q ss_pred             cCChHHHHHHHHHhhhccccccccccCCCCCCCC--CCCCCCCCCCcccccccccCC
Q 010863          117 FSRRDSFITHRAFCDALAEESTRAITGTNPILSS--SSHHQPGIVAGASSHVNLQIP  171 (498)
Q Consensus       117 F~~~s~L~~H~~~h~~~~~~s~r~h~~~kp~~C~--~C~~sf~~~s~l~sH~~~~~p  171 (498)
                      |.....|.+|+           ++|.++++|.|.  .|++.|.....|..|++.|..
T Consensus        74 f~~~~~l~~H~-----------~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~  119 (124)
T 1ubd_C           74 FSLDFNLRTHV-----------RIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK  119 (124)
T ss_dssp             ESCHHHHHHHH-----------HHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-
T ss_pred             cCCHHHHHHHH-----------HHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcc
Confidence            99999999999           556678999995  599999999999999998753

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.74  E-value=4.1e-18  Score=143.58  Aligned_cols=88  Identities=24%  Similarity=0.534  Sum_probs=48.5

Q ss_pred             CCccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCccc
Q 010863            3 TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKW   82 (498)
Q Consensus         3 ekpy~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~   82 (498)
                      +++|+|.+|++.|.....|.+|+++|.             ++++|.|++|       ++.|.....|.+|+++|+++++|
T Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~   74 (106)
T 2ee8_A           15 KKEFICKFCGRHFTKSYNLLIHERTHT-------------DERPYTCDIC-------HKAFRRQDHLRDHRYIHSKEKPF   74 (106)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHHHHC-------------CSCCCBCSSS-------CCBCSCHHHHHHHGGGSCCCCTT
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHHcC-------------CCCCcCCCCc-------cchhCCHHHHHHHHHHhCCCCCe
Confidence            445555555555555555555555554             4455555555       55555555555555555555555


Q ss_pred             ccCcCCccccchhHHHHHHhh-hCCCcee
Q 010863           83 KCDKCSKRYAVQSDWKAHSKT-CGTREYR  110 (498)
Q Consensus        83 ~C~~CgK~F~~~s~L~~H~r~-hgekpy~  110 (498)
                      +|.+|++.|.....|.+|+++ +++++|.
T Consensus        75 ~C~~C~~~f~~~~~L~~H~~~H~~~~~~~  103 (106)
T 2ee8_A           75 KCQECGKGFCQSRTLAVHKTLHMQTSSPT  103 (106)
T ss_dssp             SCSSSCCCCSSHHHHHHHHHHTTSCCCCC
T ss_pred             ECCCcCCcccCHHHHHHHHHHhCCCCCCc
Confidence            555555555555555555555 4445443

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=7.5e-18  Score=139.25  Aligned_cols=86  Identities=28%  Similarity=0.526  Sum_probs=51.6

Q ss_pred             CCCccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcc
Q 010863            2 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKK   81 (498)
Q Consensus         2 gekpy~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp   81 (498)
                      ++++|+|.+|++.|.....|..|+++|.             ++++|.|++|       ++.|.....|.+|+++|+++++
T Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~   64 (96)
T 2dmd_A            5 SSGPHKCEVCGKCFSRKDKLKTHMRCHT-------------GVKPYKCKTC-------DYAAADSSSLNKHLRIHSDERP   64 (96)
T ss_dssp             CCCCCCBTTTTBCCCCHHHHHHHGGGCC-------------CCCSEECSSS-------CCEESSHHHHHHHHHHSCCCCC
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHhcC-------------CCCCEeCCCC-------CCccCCHHHHHHHHHHhCCCCC
Confidence            4556666666666666666666666655             4556666666       5666666666666666666666


Q ss_pred             cccCcCCccccchhHHHHHHhh-hCCC
Q 010863           82 WKCDKCSKRYAVQSDWKAHSKT-CGTR  107 (498)
Q Consensus        82 ~~C~~CgK~F~~~s~L~~H~r~-hgek  107 (498)
                      |+|.+|++.|.....|..|+++ ++++
T Consensus        65 ~~C~~C~~~f~~~~~l~~H~~~h~~~~   91 (96)
T 2dmd_A           65 FKCQICPYASRNSSQLTVHLRSHTGDS   91 (96)
T ss_dssp             EECSSSSCEESSHHHHHHHHTTCCSCC
T ss_pred             ccCCCCCCccCCHHHHHHHHHHhcCCC
Confidence            6666666666666666666555 4443

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.70  E-value=1.6e-17  Score=135.50  Aligned_cols=86  Identities=24%  Similarity=0.532  Sum_probs=61.5

Q ss_pred             CCCccccC--ccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCC
Q 010863            2 ATNRFVCE--ICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGE   79 (498)
Q Consensus         2 gekpy~C~--~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htge   79 (498)
                      |+++|+|.  .|++.|.....|..|+++|.             ++++|.|++|       ++.|.....|+.|+++|+++
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~   60 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHT-------------GQKPFQCRIC-------MRNFSRSDHLTTHIRTHTGE   60 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHH-------------CCCCEECTTT-------CCEESCHHHHHHHHHHHHCC
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhC-------------CCCCccCCCC-------CcccCCHHHHHHHHHHcCCC
Confidence            46777776  47777777777777777776             6677777777       67777777777777777777


Q ss_pred             cccccCcCCccccchhHHHHHHhh-hCCC
Q 010863           80 KKWKCDKCSKRYAVQSDWKAHSKT-CGTR  107 (498)
Q Consensus        80 kp~~C~~CgK~F~~~s~L~~H~r~-hgek  107 (498)
                      ++|.|.+|++.|.....|..|+++ ++++
T Consensus        61 ~~~~C~~C~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           61 KPFACDICGRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGGGC--
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcccC
Confidence            777777777777777777777777 4543

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.69  E-value=3.9e-17  Score=134.65  Aligned_cols=83  Identities=25%  Similarity=0.504  Sum_probs=62.5

Q ss_pred             CCCCccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCC-
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGE-   79 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htge-   79 (498)
                      +++++|+|.+|++.|.....|..|+++|.             ++++|.|++|       ++.|.....|.+|++.|+++ 
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~   62 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHS-------------GEKPYSCPVC-------GLRFKRKDRMSYHVRSHDGSV   62 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSC-------------SSCSEECSSS-------CCEESCHHHHHHHHHHHCCCC
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcC-------------CCCCCcCCCC-------CCccCCHHHHHHHHHHhcCCC
Confidence            36677777777777777777777777776             6677777777       77777777777777777776 


Q ss_pred             -cccccCcCCccccchhHHHHHHhh
Q 010863           80 -KKWKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        80 -kp~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                       ++|.|.+|++.|.....|..|++.
T Consensus        63 ~~~~~C~~C~~~f~~~~~L~~H~~~   87 (95)
T 2yt9_A           63 GKPYICQSCGKGFSRPDHLNGHIKQ   87 (95)
T ss_dssp             CSSBCCSSSCCCBSSHHHHHHHHHH
T ss_pred             CCceECCCccchhCCHHHHHHHHHH
Confidence             777777777777777777777764

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.69  E-value=2.1e-17  Score=140.08  Aligned_cols=76  Identities=24%  Similarity=0.343  Sum_probs=36.8

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhhhCCCceecC-CCCccCChH
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCD-CGTLFSRRD  121 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~hgekpy~C~-Cgk~F~~~s  121 (498)
                      ++++|.|++|       ++.|.....|..|+++|  +++|.|.+|++.|.....|.+|++-+++++|.|+ |++.|.++.
T Consensus        13 ~~~~~~C~~C-------~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~H~~~~~~~C~~C~~~f~~~~   83 (107)
T 1wjp_A           13 NKEVYQCRLC-------NAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECMRTFKSSF   83 (107)
T ss_dssp             CCCCCBCTTT-------CCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHHHCSTGGGEEGGGTEECSSHH
T ss_pred             CCcCeECCCC-------CCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHHcCCCCCccCccccchhCCHH
Confidence            4444555544       44455555555554444  2345555555555555555555421344445555 555555555


Q ss_pred             HHHHHH
Q 010863          122 SFITHR  127 (498)
Q Consensus       122 ~L~~H~  127 (498)
                      .|++|+
T Consensus        84 ~L~~H~   89 (107)
T 1wjp_A           84 SIWRHQ   89 (107)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            555554

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.69  E-value=4.9e-17  Score=136.93  Aligned_cols=90  Identities=20%  Similarity=0.436  Sum_probs=84.2

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-CCCccCCh
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTLFSRR  120 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-Cgk~F~~~  120 (498)
                      .+++|.|.+|       ++.|.....|.+|+++|+++++|.|.+|++.|.....|..|+++ +++++|.|. |++.|.+.
T Consensus        14 ~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   86 (106)
T 2ee8_A           14 TKKEFICKFC-------GRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQS   86 (106)
T ss_dssp             CCCCCBCSSS-------CCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSH
T ss_pred             CCcCeECCCC-------CCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCH
Confidence            6789999999       89999999999999999999999999999999999999999999 789999999 99999999


Q ss_pred             HHHHHHHHHhhhccccccccccCCCCCCCC
Q 010863          121 DSFITHRAFCDALAEESTRAITGTNPILSS  150 (498)
Q Consensus       121 s~L~~H~~~h~~~~~~s~r~h~~~kp~~C~  150 (498)
                      ..|.+|+           ++|.++++|.+.
T Consensus        87 ~~L~~H~-----------~~H~~~~~~~~~  105 (106)
T 2ee8_A           87 RTLAVHK-----------TLHMQTSSPTAA  105 (106)
T ss_dssp             HHHHHHH-----------HHTTSCCCCCCC
T ss_pred             HHHHHHH-----------HHhCCCCCCcCC
Confidence            9999999           667778888653

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.68  E-value=5.5e-17  Score=145.84  Aligned_cols=111  Identities=16%  Similarity=0.365  Sum_probs=102.5

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhh-ccCCcc--------cccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCR-KHGEKK--------WKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~-Htgekp--------~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      .++.|.|.+|       ++.|.....|.+|++. |.++++        |.|.+|++.|.....|..|+++ +++++|.|.
T Consensus        22 ~~~~~~C~~C-------~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   94 (155)
T 2rpc_A           22 AQLSRPKKSC-------DRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCP   94 (155)
T ss_dssp             TCCSSSCCCC-------CCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECS
T ss_pred             hhcccccccC-------CcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCC
Confidence            5678999999       8999999999999998 766654        8999999999999999999999 799999996


Q ss_pred             ---CCCccCChHHHHHHHHHhhhccccccccccCCCCCCCCC--CCCCCCCCCcccccccccCC
Q 010863          113 ---CGTLFSRRDSFITHRAFCDALAEESTRAITGTNPILSSS--SHHQPGIVAGASSHVNLQIP  171 (498)
Q Consensus       113 ---Cgk~F~~~s~L~~H~~~h~~~~~~s~r~h~~~kp~~C~~--C~~sf~~~s~l~sH~~~~~p  171 (498)
                         |++.|.....|.+|+           ++|.++++|.|..  |++.|.....|..|++.|..
T Consensus        95 ~~~C~~~f~~~~~L~~H~-----------~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~  147 (155)
T 2rpc_A           95 FPGCGKIFARSENLKIHK-----------RTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTS  147 (155)
T ss_dssp             CTTTCCEESCHHHHHHHH-----------TTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTS
T ss_pred             cCCCCCccCCHHHHHHHH-----------HhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcC
Confidence               999999999999999           7788899999997  99999999999999998753

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.67  E-value=5e-17  Score=129.97  Aligned_cols=79  Identities=32%  Similarity=0.597  Sum_probs=55.9

Q ss_pred             ccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCccccc
Q 010863            5 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKC   84 (498)
Q Consensus         5 py~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C   84 (498)
                      ||+|++|++.|.....|..|+++|.             ++++|.|++|       ++.|.....|.+|++.|+++++|.|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C   60 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHS-------------DTRPYPCQYC-------GKRFHQKSDMKKHTFIHTGEKPHKC   60 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHH-------------TCCCEECSSS-------CCEESSHHHHHHHHHHHHTCCCEEC
T ss_pred             CccCCCCcccccCchhHHHHHHHcC-------------CCCCeeCCcC-------ChhhCCHHHHHHHHHHhcCCCCCcC
Confidence            4677777777777777777777765             5666777777       6777777777777777777777777


Q ss_pred             CcCCccccchhHHHHHHhh
Q 010863           85 DKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        85 ~~CgK~F~~~s~L~~H~r~  103 (498)
                      ++|++.|.....|.+|+++
T Consensus        61 ~~C~~~f~~~~~l~~H~~~   79 (82)
T 2kmk_A           61 QVCGKAFSQSSNLITHSRK   79 (82)
T ss_dssp             TTTSCEESSHHHHHHHHHH
T ss_pred             CCcchhhCChHHHHHHHHh
Confidence            7777777777777777665

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=7.4e-17  Score=136.93  Aligned_cols=85  Identities=25%  Similarity=0.584  Sum_probs=65.2

Q ss_pred             cccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-CCCccC
Q 010863           41 EIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTLFS  118 (498)
Q Consensus        41 ~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-Cgk~F~  118 (498)
                      |.++++|.| +|       ++.|.....|.+|++.|+++++|.|.+|++.|.....|.+|+++ +++++|.|. |++.|.
T Consensus         5 h~~~k~~~C-~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   76 (110)
T 2csh_A            5 SSGDKLYPC-QC-------GKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFM   76 (110)
T ss_dssp             CCCCCCEEC-TT-------SCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEES
T ss_pred             CCCCCCEec-cC-------CCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhc
Confidence            346777777 77       77777777777777777777777887788888777778888777 677778887 888888


Q ss_pred             ChHHHHHHHHHhhhc
Q 010863          119 RRDSFITHRAFCDAL  133 (498)
Q Consensus       119 ~~s~L~~H~~~h~~~  133 (498)
                      ++..|.+|++.|+..
T Consensus        77 ~~~~l~~H~~~~~~~   91 (110)
T 2csh_A           77 WRDSFHRHVTSCTKS   91 (110)
T ss_dssp             CHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHcccc
Confidence            888888888777654

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.66  E-value=1.6e-16  Score=131.22  Aligned_cols=79  Identities=19%  Similarity=0.367  Sum_probs=76.5

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-CCCccCCh
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTLFSRR  120 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-Cgk~F~~~  120 (498)
                      ++++|.|++|       ++.|.....|..|++.|+++++|.|.+|++.|.....|..|+++ +++++|.|. |++.|...
T Consensus         5 ~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   77 (96)
T 2dmd_A            5 SSGPHKCEVC-------GKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNS   77 (96)
T ss_dssp             CCCCCCBTTT-------TBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSH
T ss_pred             CCcCeECCCC-------CCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCH
Confidence            6899999999       89999999999999999999999999999999999999999999 789999999 99999999


Q ss_pred             HHHHHHHH
Q 010863          121 DSFITHRA  128 (498)
Q Consensus       121 s~L~~H~~  128 (498)
                      ..|.+|++
T Consensus        78 ~~l~~H~~   85 (96)
T 2dmd_A           78 SQLTVHLR   85 (96)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHH
Confidence            99999993

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.65  E-value=1.2e-16  Score=136.81  Aligned_cols=81  Identities=15%  Similarity=0.264  Sum_probs=43.8

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhh--ccCCcccc-cCcCCccc--cchhHHHHHHhh-hCCCceecC-CCC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCR--KHGEKKWK-CDKCSKRY--AVQSDWKAHSKT-CGTREYRCD-CGT  115 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~--Htgekp~~-C~~CgK~F--~~~s~L~~H~r~-hgekpy~C~-Cgk  115 (498)
                      ++++|.|++|       ++.|.....|..|+++  |.+++++. |.+|++.|  .....|..|+++ +++++|.|+ |++
T Consensus        16 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k   88 (115)
T 2dmi_A           16 GASKFRCKDC-------SAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGH   88 (115)
T ss_dssp             CCCSEEBSSS-------SCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCC
T ss_pred             CCCCEECCcc-------CchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCC
Confidence            4555555555       5555555555555555  44444433 55555555  555555555555 455555555 555


Q ss_pred             ccCChHHHHHHHHHh
Q 010863          116 LFSRRDSFITHRAFC  130 (498)
Q Consensus       116 ~F~~~s~L~~H~~~h  130 (498)
                      .|.++..|.+|++.|
T Consensus        89 ~f~~~~~L~~H~~~h  103 (115)
T 2dmi_A           89 SFESLQDLSVHMIKT  103 (115)
T ss_dssp             BCSSHHHHHHHHHHT
T ss_pred             ccCCHHHHHHHHHHh
Confidence            555555555555443

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.65  E-value=1.9e-16  Score=128.96  Aligned_cols=82  Identities=24%  Similarity=0.605  Sum_probs=75.6

Q ss_pred             cCcceeCC--CCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-CCCccC
Q 010863           43 RKKVYVCP--EPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTLFS  118 (498)
Q Consensus        43 ~~k~y~C~--~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-Cgk~F~  118 (498)
                      ++++|.|+  .|       ++.|.....|.+|+++|+++++|.|.+|++.|.....|..|+++ +++++|.|. |++.|.
T Consensus         1 ~~k~~~C~~~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   73 (90)
T 1a1h_A            1 MERPYACPVESC-------DRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFA   73 (90)
T ss_dssp             --CCEECCSSSC-------CCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEES
T ss_pred             CCCceECCCCCC-------CCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhC
Confidence            36899998  47       99999999999999999999999999999999999999999999 799999999 999999


Q ss_pred             ChHHHHHHHHHhh
Q 010863          119 RRDSFITHRAFCD  131 (498)
Q Consensus       119 ~~s~L~~H~~~h~  131 (498)
                      .+..|.+|+++|+
T Consensus        74 ~~~~l~~H~~~H~   86 (90)
T 1a1h_A           74 RSDERKRHTKIHL   86 (90)
T ss_dssp             SHHHHHHHHGGGG
T ss_pred             CHHHHHHHHHHhc
Confidence            9999999995443

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.64  E-value=2.3e-16  Score=126.02  Aligned_cols=79  Identities=24%  Similarity=0.542  Sum_probs=75.7

Q ss_pred             ceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-CCCccCChHHH
Q 010863           46 VYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTLFSRRDSF  123 (498)
Q Consensus        46 ~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-Cgk~F~~~s~L  123 (498)
                      +|.|++|       ++.|.....|..|++.|.++++|.|.+|++.|.....|..|+++ +++++|.|. |++.|.++..|
T Consensus         1 ~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   73 (82)
T 2kmk_A            1 SFDCKIC-------GKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNL   73 (82)
T ss_dssp             CEECSSS-------CCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHH
T ss_pred             CccCCCC-------cccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHH
Confidence            5899999       89999999999999999999999999999999999999999999 899999999 99999999999


Q ss_pred             HHHHHHhh
Q 010863          124 ITHRAFCD  131 (498)
Q Consensus       124 ~~H~~~h~  131 (498)
                      .+|+++|+
T Consensus        74 ~~H~~~H~   81 (82)
T 2kmk_A           74 ITHSRKHT   81 (82)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHhhC
Confidence            99997664

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.63  E-value=1.2e-16  Score=135.38  Aligned_cols=86  Identities=10%  Similarity=0.178  Sum_probs=79.7

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhhhCCCceecC-CCCccCChHHHHHHHHHhhhccccccccccCCCCCCC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCD-CGTLFSRRDSFITHRAFCDALAEESTRAITGTNPILS  149 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~hgekpy~C~-Cgk~F~~~s~L~~H~~~h~~~~~~s~r~h~~~kp~~C  149 (498)
                      .+++.|+++++|+|.+|++.|.....|..|+++| +++|.|. |++.|.....|.+|+           + |.++++|.|
T Consensus         6 s~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H-~~~~~C~~C~~~f~~~~~l~~H~-----------~-H~~~~~~~C   72 (107)
T 1wjp_A            6 SGASPVENKEVYQCRLCNAKLSSLLEQGSHERLC-RNAAVCPYCSLRFFSPELKQEHE-----------S-KCEYKKLTC   72 (107)
T ss_dssp             CCCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHH-HHSBCCTTTCCCBSSHHHHHHHH-----------H-HCSTGGGEE
T ss_pred             ccCcccCCCcCeECCCCCCccCCHHHHHHHHHHC-CCCccCCCCCCccCCHHHHHHHH-----------H-cCCCCCccC
Confidence            4677899999999999999999999999999997 5899999 999999999999998           4 667899999


Q ss_pred             CCCCCCCCCCCccccccc-cc
Q 010863          150 SSSHHQPGIVAGASSHVN-LQ  169 (498)
Q Consensus       150 ~~C~~sf~~~s~l~sH~~-~~  169 (498)
                      ..|++.|.....|..|++ .|
T Consensus        73 ~~C~~~f~~~~~L~~H~~~~H   93 (107)
T 1wjp_A           73 LECMRTFKSSFSIWRHQVEVH   93 (107)
T ss_dssp             GGGTEECSSHHHHHHHHHHTS
T ss_pred             ccccchhCCHHHHHHHHHHHc
Confidence            999999999999999998 44

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=3.9e-16  Score=132.42  Aligned_cols=87  Identities=23%  Similarity=0.442  Sum_probs=81.0

Q ss_pred             hhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-CCCccCChHHHHHHHHHhhhccccccccccCCCCCCCCC
Q 010863           74 CRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTLFSRRDSFITHRAFCDALAEESTRAITGTNPILSSS  151 (498)
Q Consensus        74 r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-Cgk~F~~~s~L~~H~~~h~~~~~~s~r~h~~~kp~~C~~  151 (498)
                      ..|+++++|.| +|++.|.....|.+|+++ +++++|.|. |++.|.....|.+|+           ++|.++++|.|..
T Consensus         3 ~~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-----------~~h~~~~~~~C~~   70 (110)
T 2csh_A            3 SGSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM-----------KIHTGIKPYECNI   70 (110)
T ss_dssp             CCCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHH-----------TTTCCCCCEECSS
T ss_pred             CCCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHH-----------HHcCCCCCeeCCC
Confidence            36889999999 999999999999999999 788999999 999999999999999           7788899999999


Q ss_pred             CCCCCCCCCcccccccccCCC
Q 010863          152 SHHQPGIVAGASSHVNLQIPQ  172 (498)
Q Consensus       152 C~~sf~~~s~l~sH~~~~~p~  172 (498)
                      |++.|.....|..|++.+...
T Consensus        71 C~~~f~~~~~l~~H~~~~~~~   91 (110)
T 2csh_A           71 CAKRFMWRDSFHRHVTSCTKS   91 (110)
T ss_dssp             SCCEESCHHHHHHHHHHHHHH
T ss_pred             CcchhcCHHHHHHHHHHcccc
Confidence            999999999999999877543

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.62  E-value=3e-17  Score=140.50  Aligned_cols=96  Identities=14%  Similarity=0.113  Sum_probs=86.5

Q ss_pred             hhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhh--h-CCCce-ecC-CCCcc--CChHHHHHHHHHhhhcccccc
Q 010863           66 LTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT--C-GTREY-RCD-CGTLF--SRRDSFITHRAFCDALAEEST  138 (498)
Q Consensus        66 ~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~--h-gekpy-~C~-Cgk~F--~~~s~L~~H~~~h~~~~~~s~  138 (498)
                      ...|+.|+++|+++++|.|++|++.|.....|..|+++  + ++++| .|. |++.|  ..+..|.+|+           
T Consensus         4 ~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~-----------   72 (115)
T 2dmi_A            4 GSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEME-----------   72 (115)
T ss_dssp             CCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCC-----------
T ss_pred             chhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHh-----------
Confidence            45789999999999999999999999999999999997  3 44554 499 99999  8999999998           


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCcccccccccCCC
Q 010863          139 RAITGTNPILSSSSHHQPGIVAGASSHVNLQIPQ  172 (498)
Q Consensus       139 r~h~~~kp~~C~~C~~sf~~~s~l~sH~~~~~p~  172 (498)
                      ++|.+++||.|..|++.|.....|..|++.++..
T Consensus        73 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~  106 (115)
T 2dmi_A           73 GKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHY  106 (115)
T ss_dssp             CSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTT
T ss_pred             hccCCCcceECCCCCCccCCHHHHHHHHHHhCCc
Confidence            7889999999999999999999999999988654

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.61  E-value=8.7e-16  Score=126.50  Aligned_cols=79  Identities=25%  Similarity=0.519  Sum_probs=75.8

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhh-hCC--CceecC-CCCccC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGT--REYRCD-CGTLFS  118 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hge--kpy~C~-Cgk~F~  118 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|.|.+|++.|.....|..|+++ +++  ++|.|. |++.|.
T Consensus         4 ~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~   76 (95)
T 2yt9_A            4 GSSGVACEIC-------GKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFS   76 (95)
T ss_dssp             CCSCEECSSS-------CCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBS
T ss_pred             CCCCeECCCC-------CCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhC
Confidence            7899999999       89999999999999999999999999999999999999999999 665  899999 999999


Q ss_pred             ChHHHHHHHH
Q 010863          119 RRDSFITHRA  128 (498)
Q Consensus       119 ~~s~L~~H~~  128 (498)
                      ++..|.+|++
T Consensus        77 ~~~~L~~H~~   86 (95)
T 2yt9_A           77 RPDHLNGHIK   86 (95)
T ss_dssp             SHHHHHHHHH
T ss_pred             CHHHHHHHHH
Confidence            9999999985

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.59  E-value=1.2e-15  Score=123.90  Aligned_cols=81  Identities=22%  Similarity=0.582  Sum_probs=53.6

Q ss_pred             CCccccCc--cCcccCChHHHHHHHHhcCCCccccccccccccCcceeCC--CCCCCCCCCCCccCChhhHhhhhhhccC
Q 010863            3 TNRFVCEI--CNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCP--EPNCVHHDPSRALGDLTGIKKHFCRKHG   78 (498)
Q Consensus         3 ekpy~C~~--CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~--~C~C~~~~~~k~F~~~s~Lk~H~r~Htg   78 (498)
                      +++|.|++  |++.|.....|..|+++|.             ++++|.|+  .|       ++.|.....|.+|++.|++
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~~~C-------~~~f~~~~~l~~H~~~h~~   62 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHT-------------GEKPYHCDWDGC-------GWKFARSDELTRHYRKHTG   62 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSC-------------SSCCEECCSTTT-------CCEESSHHHHHHHHHHHHC
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcC-------------CCCCcCCCCCCC-------CCccCCHHHHHHHHHHcCC
Confidence            45666666  6666666666666666665             56666665  35       6666666666666666666


Q ss_pred             CcccccCcCCccccchhHHHHHHhh
Q 010863           79 EKKWKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        79 ekp~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      +++|.|++|++.|.....|..|+++
T Consensus        63 ~~~~~C~~C~~~f~~~~~l~~H~~~   87 (89)
T 2wbs_A           63 HRPFQCQKCDRAFSRSDHLALHMKR   87 (89)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHGGG
T ss_pred             CCCccCCCCCcccCCHHHHHHHHHh
Confidence            6666666666666666666666654

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.59  E-value=2e-15  Score=125.33  Aligned_cols=71  Identities=27%  Similarity=0.591  Sum_probs=38.6

Q ss_pred             CCccCChhhHhhhhhhccCCcccccC--cCCccccchhHHHHHHhh-hCCCceecC-CCCccCChHHHHHHHHHh
Q 010863           60 SRALGDLTGIKKHFCRKHGEKKWKCD--KCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTLFSRRDSFITHRAFC  130 (498)
Q Consensus        60 ~k~F~~~s~Lk~H~r~Htgekp~~C~--~CgK~F~~~s~L~~H~r~-hgekpy~C~-Cgk~F~~~s~L~~H~~~h  130 (498)
                      ++.|.....|.+|++.|+++++|.|.  .|++.|.....|.+|+++ +++++|.|. |++.|.....|.+|+++|
T Consensus        24 ~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   98 (100)
T 2ebt_A           24 TKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH   98 (100)
T ss_dssp             CCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHHH
T ss_pred             CCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHHHh
Confidence            55555555555555555555555553  355555555555555555 455555555 555555555555555443

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.56  E-value=4.7e-16  Score=127.17  Aligned_cols=80  Identities=23%  Similarity=0.329  Sum_probs=54.4

Q ss_pred             CCccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCccc
Q 010863            3 TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKW   82 (498)
Q Consensus         3 ekpy~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~   82 (498)
                      ||||+|++|++.|.....|..|+++|.             ++++|.|++|       ++.|.....|.+|++.|++ ++|
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~~~~~C~~C-------~k~f~~~~~L~~H~~~h~~-~~~   59 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHT-------------GEKPFACDIC-------GRKFARSDERKRHRDIQHI-LPI   59 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHH-------------CCCCEECTTT-------CCEESSHHHHHHHHHHHTH-HHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcC-------------CCCCccCCCC-------CCccCCHHHHHHHHHHhCC-Ccc
Confidence            466777777777777777777776665             5666777766       6677777777777666663 566


Q ss_pred             ccCcCCccccchhHHHHHHhh
Q 010863           83 KCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        83 ~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      .|+.|++.|.....|..|++.
T Consensus        60 ~c~~C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C           60 LEDKVEELLSKNYHLENEVAR   80 (88)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhhhHHHHHH
Confidence            666666666666666666665

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.55  E-value=6.2e-15  Score=122.30  Aligned_cols=82  Identities=28%  Similarity=0.515  Sum_probs=75.5

Q ss_pred             CCcccccCc--CCccccchhHHHHHHhh-hCCCceec--C-CCCccCChHHHHHHHHHhhhccccccccccCCCCCCCCC
Q 010863           78 GEKKWKCDK--CSKRYAVQSDWKAHSKT-CGTREYRC--D-CGTLFSRRDSFITHRAFCDALAEESTRAITGTNPILSSS  151 (498)
Q Consensus        78 gekp~~C~~--CgK~F~~~s~L~~H~r~-hgekpy~C--~-Cgk~F~~~s~L~~H~~~h~~~~~~s~r~h~~~kp~~C~~  151 (498)
                      .+++|.|.+  |++.|.....|..|+++ +++++|.|  + |++.|.....|.+|+           ++|.++++|.|..
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-----------~~h~~~~~~~C~~   80 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHY-----------RKHTGAKPFQCGV   80 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHH-----------HHHTSCCSCBCSS
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHH-----------HHhCCCCCeECCC
Confidence            467899997  99999999999999999 78999999  4 999999999999999           5677899999999


Q ss_pred             CCCCCCCCCcccccccccC
Q 010863          152 SHHQPGIVAGASSHVNLQI  170 (498)
Q Consensus       152 C~~sf~~~s~l~sH~~~~~  170 (498)
                      |++.|.....|..|++.|.
T Consensus        81 C~~~f~~~~~l~~H~~~H~   99 (100)
T 2ebt_A           81 CNRSFSRSDHLALHMKRHQ   99 (100)
T ss_dssp             SCCBCSSHHHHHHHHHHHC
T ss_pred             CcCccCCHHHHHHHHHHhC
Confidence            9999999999999998774

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.55  E-value=4.5e-16  Score=127.30  Aligned_cols=84  Identities=21%  Similarity=0.319  Sum_probs=78.6

Q ss_pred             CcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhhhCCCceecC-CCCccCChHH
Q 010863           44 KKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCD-CGTLFSRRDS  122 (498)
Q Consensus        44 ~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~hgekpy~C~-Cgk~F~~~s~  122 (498)
                      +++|.|++|       ++.|.....|..|+++|+++++|.|++|++.|.....|..|++++..++|.|+ |++.|.....
T Consensus         1 ek~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~   73 (88)
T 1llm_C            1 MKPFQCRIC-------MRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYH   73 (88)
T ss_dssp             CCCEECTTT-------CCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCC-------CCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhh
Confidence            578999999       89999999999999999999999999999999999999999999546899999 9999999999


Q ss_pred             HHHHHHHhhhcc
Q 010863          123 FITHRAFCDALA  134 (498)
Q Consensus       123 L~~H~~~h~~~~  134 (498)
                      |..|++.++...
T Consensus        74 L~~H~~~~h~~~   85 (88)
T 1llm_C           74 LENEVARLKKLV   85 (88)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHh
Confidence            999998877654

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.55  E-value=2.9e-15  Score=115.84  Aligned_cols=58  Identities=24%  Similarity=0.558  Sum_probs=49.1

Q ss_pred             CCccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCc
Q 010863            3 TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEK   80 (498)
Q Consensus         3 ekpy~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgek   80 (498)
                      ||||+|++|||.|.....|.+|+++|.             ++++|.|++|       ++.|.....|++|+++|+|++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht-------------~ekp~~C~~C-------~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHL-------------GYRPRSCPEC-------GKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHH-------------TCCCEECTTT-------CCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhC-------------CCcCeECCCC-------CCCcCCHHHHHHHhCccCCCC
Confidence            788888888888888888888888887             7888888888       888888888888888888764

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=4.9e-15  Score=117.98  Aligned_cols=72  Identities=19%  Similarity=0.472  Sum_probs=61.2

Q ss_pred             CCCCccccCc--cCcccCChHHHHHHHH-hcCCCccccccccccccCcceeCCC--CCCCCCCCCCccCChhhHhhhhhh
Q 010863            1 MATNRFVCEI--CNKGFQRDQNLQLHRR-GHNLPWKLKQRTSKEIRKKVYVCPE--PNCVHHDPSRALGDLTGIKKHFCR   75 (498)
Q Consensus         1 ~gekpy~C~~--CgK~F~~~s~L~~H~r-~H~~p~~c~~~~~~~~~~k~y~C~~--C~C~~~~~~k~F~~~s~Lk~H~r~   75 (498)
                      +++++|.|+.  |++.|..+..|.+|++ .|.             ++++|.|++  |       ++.|.....|++|+++
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~-------------~~~~~~C~~~~C-------~k~f~~~~~L~~H~~~   62 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHI-------------HQKSFSCPEPAC-------GKSFNFKKHLKEHMKL   62 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGG-------------SCCCEECSCTTT-------CCEESSHHHHHHHHHH
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhC-------------CCCCeECCCCCC-------cCccCCHHHHHHHHHH
Confidence            4678888887  8998988888888888 676             778888888  7       8888888888888888


Q ss_pred             ccCCcccccCcCCcccc
Q 010863           76 KHGEKKWKCDKCSKRYA   92 (498)
Q Consensus        76 Htgekp~~C~~CgK~F~   92 (498)
                      |+++++|.|++|++.|.
T Consensus        63 H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           63 HSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             HHTSCCCSCCSSSCCCC
T ss_pred             hCCCCCeeCCCCCCCCC
Confidence            88888888888888873

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.54  E-value=8.4e-15  Score=118.89  Aligned_cols=81  Identities=26%  Similarity=0.555  Sum_probs=75.5

Q ss_pred             cCcceeCCC--CCCCCCCCCCccCChhhHhhhhhhccCCcccccC--cCCccccchhHHHHHHhh-hCCCceecC-CCCc
Q 010863           43 RKKVYVCPE--PNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCD--KCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTL  116 (498)
Q Consensus        43 ~~k~y~C~~--C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~--~CgK~F~~~s~L~~H~r~-hgekpy~C~-Cgk~  116 (498)
                      ..+.|.|++  |       ++.|.....|.+|++.|+++++|.|+  .|++.|.....|..|+++ +++++|.|. |++.
T Consensus         2 ~~~~~~C~~~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   74 (89)
T 2wbs_A            2 RTATHTCDYAGC-------GKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRA   74 (89)
T ss_dssp             -CCCEECCSTTT-------CCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCE
T ss_pred             CCCCeeCCCCCC-------CCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcc
Confidence            357899999  7       99999999999999999999999997  599999999999999999 799999999 9999


Q ss_pred             cCChHHHHHHHHHh
Q 010863          117 FSRRDSFITHRAFC  130 (498)
Q Consensus       117 F~~~s~L~~H~~~h  130 (498)
                      |.....|.+|+++|
T Consensus        75 f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           75 FSRSDHLALHMKRH   88 (89)
T ss_dssp             ESSHHHHHHHGGGG
T ss_pred             cCCHHHHHHHHHhh
Confidence            99999999999654

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=1.1e-14  Score=117.43  Aligned_cols=78  Identities=22%  Similarity=0.456  Sum_probs=71.2

Q ss_pred             hHhhhhhhccCCcccccCcCCccccchhHHHHHHhh-hCC----CceecC-CCCccCChHHHHHHHHHhhhccccccccc
Q 010863           68 GIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGT----REYRCD-CGTLFSRRDSFITHRAFCDALAEESTRAI  141 (498)
Q Consensus        68 ~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hge----kpy~C~-Cgk~F~~~s~L~~H~~~h~~~~~~s~r~h  141 (498)
                      .|.+|+++|+++++|.|.+|++.|.....|.+|+++ +++    ++|.|. |++.|..+..|.+|+           ++|
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~-----------~~h   70 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHA-----------DNC   70 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHH-----------HHC
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHH-----------HHc
Confidence            467899999999999999999999999999999988 654    789999 999999999999999           677


Q ss_pred             cCCCCCCCCCCCCCC
Q 010863          142 TGTNPILSSSSHHQP  156 (498)
Q Consensus       142 ~~~kp~~C~~C~~sf  156 (498)
                      .+++++.|..|+.++
T Consensus        71 ~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           71 AGPDGVEGENSGPSS   85 (86)
T ss_dssp             CCCCSCCCCCCCCCC
T ss_pred             cCCCCcccCCCCCCC
Confidence            889999999998875

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.49  E-value=2.5e-14  Score=114.67  Aligned_cols=76  Identities=26%  Similarity=0.539  Sum_probs=67.9

Q ss_pred             cccc--CccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCC--CCCCCCCCCCccCChhhHhhhhhhccCCc
Q 010863            5 RFVC--EICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPE--PNCVHHDPSRALGDLTGIKKHFCRKHGEK   80 (498)
Q Consensus         5 py~C--~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~--C~C~~~~~~k~F~~~s~Lk~H~r~Htgek   80 (498)
                      ||+|  ++|++.|.....|..|+++|.             ++++|.|++  |       ++.|.....|++|+++|++  
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~~~C-------~~~f~~~~~l~~H~~~h~~--   58 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHT-------------QQLPYECPHEGC-------DKRFSLPSRLKRHEKVHAG--   58 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHH-------------TTCCEECCSTTC-------CCEESSHHHHHHHHHHHHS--
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhC-------------CCCCeeCCCCCC-------cCccCCHHHHHHHHHHhCC--
Confidence            6889  889999999999999999887             788899988  8       8999999999999999988  


Q ss_pred             ccccCc---CCccccchhHHHHHHhh
Q 010863           81 KWKCDK---CSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        81 p~~C~~---CgK~F~~~s~L~~H~r~  103 (498)
                       |.|.+   |++.|.....|.+|+++
T Consensus        59 -~~C~~~~~C~~~f~~~~~l~~H~~~   83 (85)
T 2j7j_A           59 -YPCKKDDSCSFVGKTWTLYLKHVAE   83 (85)
T ss_dssp             -EECCSCSSCCCEESSHHHHHHHHHH
T ss_pred             -CCCCCCCCCCCccCCHHHHHHHHHh
Confidence             89988   99999999999999876

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.47  E-value=2.7e-14  Score=110.35  Aligned_cols=54  Identities=22%  Similarity=0.442  Sum_probs=37.4

Q ss_pred             CcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhhh
Q 010863           44 KKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTC  104 (498)
Q Consensus        44 ~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~h  104 (498)
                      ||||+|.+|       ++.|.....|.+|+++|+++|||.|++|+|.|.....|++|+++|
T Consensus         2 EKpy~C~~C-------~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~H   55 (60)
T 4gzn_C            2 ERPFFCNFC-------GKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVH   55 (60)
T ss_dssp             CCCEECTTT-------CCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGG
T ss_pred             CCCccCCCC-------CCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCcc
Confidence            566777776       677777777777777777777777777777777777777776663

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.47  E-value=3e-15  Score=130.70  Aligned_cols=117  Identities=14%  Similarity=0.221  Sum_probs=86.8

Q ss_pred             CCCCccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCc
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEK   80 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgek   80 (498)
                      .|+|+|.|..++....  ..+..|.+.+..          ...++.+.|++|...+ ...+.|.....|..|+ .|++++
T Consensus         8 ~~~k~~~~~~k~~~~~--~s~ee~~~~~~l----------~~~~~~~~c~~~~~~~-~~~~~~~~~~~l~~h~-~h~~~~   73 (129)
T 2wbt_A            8 SGSKKYLSNHKGIFIH--VTLEELKRYHQL----------TPEQKRLIRAIVKTLI-HNPQLLDESSYLYRLL-ASKAIS   73 (129)
T ss_dssp             TTCCGGGGCSSCEEEE--CCHHHHHHHTTS----------CHHHHHHHHHHHHHHH-HCGGGTTTHHHHHHHH-HHHHHC
T ss_pred             ccccccccccCCeeee--ecHHhhhccccC----------ChhhCcccchhhhccc-CCCcccCCHHHHHHHH-HhCCCC
Confidence            4789999987654432  345556555531          1145677788772000 0023344667777777 689999


Q ss_pred             ccccCcCCccccchhHHHHHHhhhCCCceecC-CCCccCChHHHHHHHHHhhh
Q 010863           81 KWKCDKCSKRYAVQSDWKAHSKTCGTREYRCD-CGTLFSRRDSFITHRAFCDA  132 (498)
Q Consensus        81 p~~C~~CgK~F~~~s~L~~H~r~hgekpy~C~-Cgk~F~~~s~L~~H~~~h~~  132 (498)
                      +|.|++|++.|.....|+.|+++| +++|.|+ |++.|.++..|++|+++|++
T Consensus        74 ~~~C~~C~k~f~~~~~l~~H~~~H-~~~~~C~~C~k~f~~~~~l~~H~~~h~~  125 (129)
T 2wbt_A           74 QFVCPLCLMPFSSSVSLKQHIRYT-EHTKVCPVCKKEFTSTDSALDHVCKKHN  125 (129)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHHT-CCCCBCTTTCCBCSSHHHHHHHHHHTTC
T ss_pred             CeECCCCCcccCCHhHHHHHHHHC-CCCCCCCCCCcccCCHHHHHHHHHHHCC
Confidence            999999999999999999999999 9999999 99999999999999977764

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=5.3e-14  Score=112.00  Aligned_cols=62  Identities=26%  Similarity=0.547  Sum_probs=36.0

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceec
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRC  111 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C  111 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|++|++.|.....|.+|+++ +++++|.|
T Consensus        15 ~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           15 ERRRYKCDEC-------GKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CSCSSBCSSS-------CCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCEECCCC-------CcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            4555555555       55555555555555555555555555555555555555555555 45555555

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=2.3e-14  Score=115.58  Aligned_cols=77  Identities=21%  Similarity=0.405  Sum_probs=70.4

Q ss_pred             HHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCC----cccccCcCCccccchhH
Q 010863           21 LQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGE----KKWKCDKCSKRYAVQSD   96 (498)
Q Consensus        21 L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htge----kp~~C~~CgK~F~~~s~   96 (498)
                      |.+|+++|.             ++++|.|.+|       ++.|.....|.+|++.|+.+    ++|.|.+|++.|.....
T Consensus         3 ~~~H~~~H~-------------~~k~~~C~~C-------~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~   62 (86)
T 1x6h_A            3 SGSSGRTHT-------------GEKPYACSHC-------DKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT   62 (86)
T ss_dssp             TTCCSTTCC-------------CCCCEECSSS-------SCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHH
T ss_pred             cccccceec-------------CCCCCcCCCC-------CCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHH
Confidence            456777776             8999999999       89999999999999988765    78999999999999999


Q ss_pred             HHHHHhh-hCCCceecC-CCCcc
Q 010863           97 WKAHSKT-CGTREYRCD-CGTLF  117 (498)
Q Consensus        97 L~~H~r~-hgekpy~C~-Cgk~F  117 (498)
                      |..|+++ +++++|.|. |+..|
T Consensus        63 L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           63 MARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             HHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             HHHHHHHccCCCCcccCCCCCCC
Confidence            9999999 899999999 99876

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=6.1e-14  Score=119.81  Aligned_cols=70  Identities=17%  Similarity=0.285  Sum_probs=44.7

Q ss_pred             CCCCccccCccCcccCChHHHHHHHH-hcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhh-hhhccC
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRR-GHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKH-FCRKHG   78 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r-~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H-~r~Htg   78 (498)
                      +|++||+|++|++.|..+..|.+|++ +|.+.          .++++|.|.+|       ++.|..+..|++| +++|++
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~----------~~ekpf~C~~C-------gk~F~~~~~L~~H~~r~Htg   76 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNV----------VLNSSYVCVEC-------NFLTKRYDALSEHNLKYHPG   76 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSC----------CCSCCEEETTT-------TEEESSTHHHHTHHHHTSTT
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCC----------CCCCCcCCCCC-------CcccCCHHHHHHHHHHhcCC
Confidence            35667777777777777777777765 35200          04566777766       6677777777777 566777


Q ss_pred             CcccccCcC
Q 010863           79 EKKWKCDKC   87 (498)
Q Consensus        79 ekp~~C~~C   87 (498)
                      ++||.|.++
T Consensus        77 ekpy~C~~~   85 (102)
T 2ghf_A           77 EENFKLTMV   85 (102)
T ss_dssp             CCCEEEEEC
T ss_pred             CCCeeCCcc
Confidence            777776654

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=1.5e-13  Score=109.32  Aligned_cols=69  Identities=22%  Similarity=0.419  Sum_probs=62.1

Q ss_pred             cCcceeCCC--CCCCCCCCCCccCChhhHhhhhh-hccCCcccccCc--CCccccchhHHHHHHhh-hCCCceecC-CCC
Q 010863           43 RKKVYVCPE--PNCVHHDPSRALGDLTGIKKHFC-RKHGEKKWKCDK--CSKRYAVQSDWKAHSKT-CGTREYRCD-CGT  115 (498)
Q Consensus        43 ~~k~y~C~~--C~C~~~~~~k~F~~~s~Lk~H~r-~Htgekp~~C~~--CgK~F~~~s~L~~H~r~-hgekpy~C~-Cgk  115 (498)
                      ++++|.|..  |       ++.|.....|++|++ .|.++++|.|++  |++.|..+..|++|+++ +++++|.|+ |++
T Consensus         4 ~~~~~~C~~~~C-------~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k   76 (79)
T 2dlk_A            4 GSSGMPCDFPGC-------GRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGP   76 (79)
T ss_dssp             CCSSEECSSTTT-------CCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSC
T ss_pred             CCCCccCCCCCC-------cCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCC
Confidence            678899987  7       899999999999998 799999999998  99999999999999998 788999999 999


Q ss_pred             ccC
Q 010863          116 LFS  118 (498)
Q Consensus       116 ~F~  118 (498)
                      .|.
T Consensus        77 ~F~   79 (79)
T 2dlk_A           77 SSG   79 (79)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            884

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=1.1e-13  Score=116.01  Aligned_cols=72  Identities=15%  Similarity=0.192  Sum_probs=64.8

Q ss_pred             CCccCChhhHhhhhhhccCCcccccCcCCcccc-chhHHHHHHhh-hC-CCceecC-CCCccCChHHHHHHHHHhh
Q 010863           60 SRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYA-VQSDWKAHSKT-CG-TREYRCD-CGTLFSRRDSFITHRAFCD  131 (498)
Q Consensus        60 ~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~-~~s~L~~H~r~-hg-ekpy~C~-Cgk~F~~~s~L~~H~~~h~  131 (498)
                      ...+.....+.+|+++|.++++|.|++|++.|. ....|++|+++ ++ +++|.|+ |++.|.++..|++|+++|+
T Consensus         3 s~s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~   78 (98)
T 2gqj_A            3 SGSSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEH   78 (98)
T ss_dssp             CCCCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHS
T ss_pred             CCCCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHc
Confidence            345667778899999999999999999999999 99999999999 67 8999999 9999999999999994443

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.41  E-value=1.8e-13  Score=108.00  Aligned_cols=61  Identities=25%  Similarity=0.476  Sum_probs=31.7

Q ss_pred             CCCccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcc
Q 010863            2 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKK   81 (498)
Q Consensus         2 gekpy~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp   81 (498)
                      ++++|+|++|++.|..+..|.+|+++|.             ++++|.|.+|       ++.|.....|++|+++|++++|
T Consensus        14 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~-------------~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~kp   73 (74)
T 2lce_A           14 SDKPYKCDRCQASFRYKGNLASHKTVHT-------------GEKPYRCNIC-------GAQFNRPANLKTHTRIHSGEKP   73 (74)
T ss_dssp             CCCSBCCTTSSCCBSCHHHHHHHHHHHC-------------CCCSEECTTT-------CCEESCHHHHHHHHHHHCCSCC
T ss_pred             CCCCeECCCCCceeCCHHHHHHHHHHcC-------------CCCCEECCCC-------CchhCCHHHHHHHHHhcCCCCC
Confidence            3445555555555555555555555554             4455555555       4555555555555555555544


Q ss_pred             c
Q 010863           82 W   82 (498)
Q Consensus        82 ~   82 (498)
                      |
T Consensus        74 ~   74 (74)
T 2lce_A           74 Y   74 (74)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.40  E-value=3.4e-13  Score=108.01  Aligned_cols=76  Identities=28%  Similarity=0.613  Sum_probs=70.5

Q ss_pred             ceeC--CCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCc--CCccccchhHHHHHHhh-hCCCceecC----CCCc
Q 010863           46 VYVC--PEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDK--CSKRYAVQSDWKAHSKT-CGTREYRCD----CGTL  116 (498)
Q Consensus        46 ~y~C--~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~--CgK~F~~~s~L~~H~r~-hgekpy~C~----Cgk~  116 (498)
                      +|.|  ++|       ++.|.....|.+|+++|+++++|+|++  |++.|.....|.+|+++ ++   |.|.    |++.
T Consensus         1 p~~C~~~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~   70 (85)
T 2j7j_A            1 MYVCHFENC-------GKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFV   70 (85)
T ss_dssp             CEECCSTTC-------CCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCE
T ss_pred             CccCCCCCC-------CcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCc
Confidence            5899  888       999999999999999999999999998  99999999999999999 55   9995    9999


Q ss_pred             cCChHHHHHHHHHhh
Q 010863          117 FSRRDSFITHRAFCD  131 (498)
Q Consensus       117 F~~~s~L~~H~~~h~  131 (498)
                      |.....|.+|+++|+
T Consensus        71 f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           71 GKTWTLYLKHVAECH   85 (85)
T ss_dssp             ESSHHHHHHHHHHCC
T ss_pred             cCCHHHHHHHHHhcC
Confidence            999999999997653

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=1.4e-13  Score=115.37  Aligned_cols=79  Identities=18%  Similarity=0.326  Sum_probs=71.7

Q ss_pred             ccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccC-ChhhHhhhhhhccC-CcccccCcCCccc
Q 010863           14 GFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALG-DLTGIKKHFCRKHG-EKKWKCDKCSKRY   91 (498)
Q Consensus        14 ~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~-~~s~Lk~H~r~Htg-ekp~~C~~CgK~F   91 (498)
                      .+.....+..|+++|.             ++++|.|++|       ++.|. ....|++|+++|++ +++|.|.+|+|.|
T Consensus         5 s~~~~~~~~~h~~~h~-------------~~~~~~C~~C-------~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F   64 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIH-------------ERGEAVCPTC-------NVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQF   64 (98)
T ss_dssp             CCCCCCSCSHHHHTTT-------------TTSCCCCTTT-------CCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCC
T ss_pred             CCCCCCcHHHHHHHhc-------------cCCCcCCCCC-------CCChhhhHHHHHHHHHHHcCCCCCEECCCCCCcc
Confidence            4555667888999998             8999999999       89999 99999999999999 9999999999999


Q ss_pred             cchhHHHHHHhh-hCCCceecC
Q 010863           92 AVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        92 ~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      ..+..|++|+++ ++++++...
T Consensus        65 ~~~~~L~~H~~~h~~~kp~~~~   86 (98)
T 2gqj_A           65 KSKAGLNYHTMAEHSAKPSDAE   86 (98)
T ss_dssp             SCHHHHHHHHHHHSCSCSSCCC
T ss_pred             CCHHHHHHHHHHHcCCCCCCCC
Confidence            999999999999 899886654

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=4e-13  Score=106.87  Aligned_cols=67  Identities=34%  Similarity=0.782  Sum_probs=62.2

Q ss_pred             hhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-CCCccCChHHHHHHHHHhhhccccccccccCCCCCCC
Q 010863           72 HFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTLFSRRDSFITHRAFCDALAEESTRAITGTNPILS  149 (498)
Q Consensus        72 H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-Cgk~F~~~s~L~~H~~~h~~~~~~s~r~h~~~kp~~C  149 (498)
                      +...+.++++|.|++|++.|.....|.+|+++ +++++|.|+ |++.|..+..|.+|+           ++|.+++||.|
T Consensus         9 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~-----------~~H~~~~p~~C   77 (77)
T 2cot_A            9 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHH-----------RVHTGSGPSSG   77 (77)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHG-----------GGSCCCCCCCC
T ss_pred             CcCcCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHH-----------HHhCCCCCCCC
Confidence            44567789999999999999999999999999 789999999 999999999999999           78889999998

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=3e-13  Score=107.59  Aligned_cols=65  Identities=20%  Similarity=0.394  Sum_probs=57.9

Q ss_pred             hHhhhhhhccCCcccccCcCCccccchhHHHHHHhh-hC--CCceecC-CCCccCChHHHHHHHHHhhh
Q 010863           68 GIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CG--TREYRCD-CGTLFSRRDSFITHRAFCDA  132 (498)
Q Consensus        68 ~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hg--ekpy~C~-Cgk~F~~~s~L~~H~~~h~~  132 (498)
                      .|.+|+++|+++++|.|++|++.|.....|++|++. |.  +++|.|+ |++.|.++..|.+|++.++.
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            357899999999999999999999999999999985 54  3899999 99999999999999976654

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=6.4e-13  Score=111.64  Aligned_cols=67  Identities=13%  Similarity=0.276  Sum_probs=63.5

Q ss_pred             CccCChhhHhhhhhhccCCcccccCcCCccc-cchhHHHHHHhhhCCCceecC-CCCccCChHHHHHH-H
Q 010863           61 RALGDLTGIKKHFCRKHGEKKWKCDKCSKRY-AVQSDWKAHSKTCGTREYRCD-CGTLFSRRDSFITH-R  127 (498)
Q Consensus        61 k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F-~~~s~L~~H~r~hgekpy~C~-Cgk~F~~~s~L~~H-~  127 (498)
                      ..|.....|..|++.|+++++|.|++|+|.| ..+..|+.|+++|++++|.|. |++.|..+..|++| +
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h~~k~~~C~~Cgk~F~~~~~L~~H~~   83 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVM   83 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHHCCCCCCCSSSCCCCSSHHHHHHHHH
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHHCCCCeECCCCCCeeCCHHHHHHHhH
Confidence            5677888999999999999999999999999 999999999999988999999 99999999999999 7

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=6.9e-13  Score=111.43  Aligned_cols=77  Identities=16%  Similarity=0.198  Sum_probs=70.8

Q ss_pred             CcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCcc-CChhhHhhhhhhccCCcccccCcCCcc
Q 010863           12 NKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRAL-GDLTGIKKHFCRKHGEKKWKCDKCSKR   90 (498)
Q Consensus        12 gK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F-~~~s~Lk~H~r~Htgekp~~C~~CgK~   90 (498)
                      ...|.....|..|++.|.             ++++|.|++|       ++.| .....|+.|+++| ++++|.|.+|+|.
T Consensus        13 ~~~~~~~~~~~~~~~~~~-------------~~~~~~C~~C-------~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~   71 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIV-------------DKGSVSCPTC-------QAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQ   71 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHH-------------HTSCEECTTT-------CSCEESSHHHHHHHHHHH-CCCCCCCSSSCCC
T ss_pred             CCCCCCchHHHHHHHHhc-------------CCCCcCCCCC-------CCCcccCHHHHHHHHHHH-CCCCeECCCCCCe
Confidence            457788889999999998             8899999999       9999 9999999999999 9999999999999


Q ss_pred             ccchhHHHHH-HhhhCCCce
Q 010863           91 YAVQSDWKAH-SKTCGTREY  109 (498)
Q Consensus        91 F~~~s~L~~H-~r~hgekpy  109 (498)
                      |..+..|+.| +++|.+++|
T Consensus        72 F~~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           72 LRSLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             CSSHHHHHHHHHHHTCCCSS
T ss_pred             eCCHHHHHHHhHHhcCCCCC
Confidence            9999999999 777776665

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=8e-13  Score=103.16  Aligned_cols=48  Identities=21%  Similarity=0.302  Sum_probs=22.6

Q ss_pred             CCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCC
Q 010863           60 SRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTR  107 (498)
Q Consensus        60 ~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgek  107 (498)
                      ++.|.....|++|+++|+++++|+|++|++.|.....|.+|+++ ++++
T Consensus        16 ~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   64 (70)
T 1x5w_A           16 SYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDM   64 (70)
T ss_dssp             SCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSS
T ss_pred             CcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCC
Confidence            44444444444444444444444444444444444444444444 4443

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=1.8e-12  Score=101.77  Aligned_cols=60  Identities=28%  Similarity=0.614  Sum_probs=46.0

Q ss_pred             hhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-CCCccCChHHHHHHHHHhh
Q 010863           72 HFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTLFSRRDSFITHRAFCD  131 (498)
Q Consensus        72 H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-Cgk~F~~~s~L~~H~~~h~  131 (498)
                      +.++|+++++|+|++|++.|.....|++|+++ +++++|.|. |++.|.++..|++|+++|+
T Consensus         5 ~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~   66 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHT   66 (72)
T ss_dssp             CCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcC
Confidence            35567777888888888888888888888777 677788888 8888888888888876554

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.29  E-value=2.1e-12  Score=101.90  Aligned_cols=60  Identities=22%  Similarity=0.525  Sum_probs=38.2

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCce
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREY  109 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy  109 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|.+|++.|.....|.+|+++ +++++|
T Consensus        14 ~~~~~~C~~C-------~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           14 SDKPYKCDRC-------QASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCSBCCTTS-------SCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCCeECCCC-------CceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            5566666666       56666666666666666666666666666666666666666666 455554

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.29  E-value=2.4e-12  Score=101.08  Aligned_cols=55  Identities=27%  Similarity=0.457  Sum_probs=41.5

Q ss_pred             ccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhh
Q 010863           42 IRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        42 ~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      .++++|.|++|       ++.|.....|++|+++|+++++|+|++|++.|.....|++|+++
T Consensus        10 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~   64 (72)
T 1x6e_A           10 SGEKPYGCVEC-------GKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRI   64 (72)
T ss_dssp             TTCCCEECSSS-------CCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCCCCccCCCC-------CCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHh
Confidence            36777777777       67777777777777777777777777777777777777777777

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.28  E-value=5.6e-13  Score=116.17  Aligned_cols=81  Identities=16%  Similarity=0.239  Sum_probs=70.9

Q ss_pred             CCccccCccCcccC------ChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhc
Q 010863            3 TNRFVCEICNKGFQ------RDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRK   76 (498)
Q Consensus         3 ekpy~C~~CgK~F~------~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H   76 (498)
                      +++|.|++|.+.|.      ....|..|+ .|+             ++++|.|++|       ++.|.....|++|+++|
T Consensus        39 ~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~-------------~~~~~~C~~C-------~k~f~~~~~l~~H~~~H   97 (129)
T 2wbt_A           39 QKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASK-------------AISQFVCPLC-------LMPFSSSVSLKQHIRYT   97 (129)
T ss_dssp             HHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHH-------------HHCSEECTTT-------CCEESSHHHHHHHHHHT
T ss_pred             hCcccchhhhcccCCCcccCCHHHHHHHH-HhC-------------CCCCeECCCC-------CcccCCHhHHHHHHHHC
Confidence            35678999888776      556677776 466             7899999999       99999999999999999


Q ss_pred             cCCcccccCcCCccccchhHHHHHHhh-hCC
Q 010863           77 HGEKKWKCDKCSKRYAVQSDWKAHSKT-CGT  106 (498)
Q Consensus        77 tgekp~~C~~CgK~F~~~s~L~~H~r~-hge  106 (498)
                        +++|.|++|++.|.....|++|+++ |+.
T Consensus        98 --~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           98 --EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             --CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             --CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence              8999999999999999999999999 654

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.28  E-value=2.4e-12  Score=99.02  Aligned_cols=59  Identities=29%  Similarity=0.604  Sum_probs=43.0

Q ss_pred             hhccCCcccccCcCCccccchhHHHHHHhh-h--CCCceecC-CCCccCChHHHHHHHHHhhh
Q 010863           74 CRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-C--GTREYRCD-CGTLFSRRDSFITHRAFCDA  132 (498)
Q Consensus        74 r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-h--gekpy~C~-Cgk~F~~~s~L~~H~~~h~~  132 (498)
                      ++|+++++|.|++|++.|.....|..|+++ |  ++++|.|+ |++.|.++..|.+|++.+++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            466777777777777777777777777776 5  56777777 77777777777777766553

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=2.4e-12  Score=109.87  Aligned_cols=63  Identities=16%  Similarity=0.171  Sum_probs=38.7

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhh-hc---cCCcccccCcCCccccchhHHHHH-Hhh-hCCCceecC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFC-RK---HGEKKWKCDKCSKRYAVQSDWKAH-SKT-CGTREYRCD  112 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r-~H---tgekp~~C~~CgK~F~~~s~L~~H-~r~-hgekpy~C~  112 (498)
                      ++++|.|++|       ++.|..+..|++|++ .|   .++++|+|++|+|.|..+..|++| +++ .++++|.|.
T Consensus        15 gekpy~C~~C-------gk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~   83 (102)
T 2ghf_A           15 VEGGYECKYC-------TFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLT   83 (102)
T ss_dssp             CCSSEECSSC-------SCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEE
T ss_pred             CCcCcCCCCC-------CCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCC
Confidence            5566666666       566666666666665 35   345666666666666666666666 455 456666665

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.27  E-value=2.6e-12  Score=95.76  Aligned_cols=56  Identities=29%  Similarity=0.480  Sum_probs=35.6

Q ss_pred             CCCccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhcc
Q 010863            2 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKH   77 (498)
Q Consensus         2 gekpy~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Ht   77 (498)
                      |+++|+|++|++.|.....|..|+++|.             ++++|.|++|       ++.|.....|.+|+++|+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHT-------------GEKPYKCEFC-------EYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHH-------------CCCCEECSSS-------SCEESSHHHHHHHHHHHC
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcC-------------CCCCcCCCCC-------cchhCCHHHHHHHHHHhc
Confidence            4566777777777777777777766665             5666777666       666766666777666665

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=4e-12  Score=99.17  Aligned_cols=58  Identities=17%  Similarity=0.436  Sum_probs=53.6

Q ss_pred             hccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-CCCccCChHHHHHHHHHhhh
Q 010863           75 RKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTLFSRRDSFITHRAFCDA  132 (498)
Q Consensus        75 ~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-Cgk~F~~~s~L~~H~~~h~~  132 (498)
                      .|.++++|+|++|++.|.....|++|+++ +++++|.|+ |++.|.++..|.+|+++|+.
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~   62 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG   62 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhC
Confidence            57889999999999999999999999999 689999999 99999999999999966553

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=6.5e-14  Score=109.19  Aligned_cols=70  Identities=17%  Similarity=0.247  Sum_probs=64.3

Q ss_pred             hhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhhhCCCceecC-CCCccCChHHHHHHHHHhhhccccccccccCC
Q 010863           66 LTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCD-CGTLFSRRDSFITHRAFCDALAEESTRAITGT  144 (498)
Q Consensus        66 ~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~hgekpy~C~-Cgk~F~~~s~L~~H~~~h~~~~~~s~r~h~~~  144 (498)
                      ...|..|+++|+++++|.|++|++.|.....|..      +++|.|+ |++.|.....|.+|+           ++|.++
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~------~~~~~C~~C~~~f~~~~~l~~H~-----------~~H~~~   65 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR------RKTPMCEKCRKDSCQEAALNKDE-----------GNESGK   65 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC------SSSCCCHHHHHTCSCCCSSCCCS-----------SCCCCC
T ss_pred             chhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc------CCCCCCCCCChhhcCHHHHHHHH-----------HhhcCC
Confidence            4578899999999999999999999999988876      7899999 999999999999998           788899


Q ss_pred             CCCCCCCC
Q 010863          145 NPILSSSS  152 (498)
Q Consensus       145 kp~~C~~C  152 (498)
                      ++|.|..|
T Consensus        66 ~~~~C~~C   73 (73)
T 2ctu_A           66 KTSGPSSG   73 (73)
T ss_dssp             CCSSCCCC
T ss_pred             CCCCCCCC
Confidence            99999987

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.23  E-value=7.5e-12  Score=103.30  Aligned_cols=54  Identities=13%  Similarity=0.353  Sum_probs=47.5

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhh
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      ..+.|.|++|       ++.|..+..|++|+++|+++++|.|++|+|.|.++..|++|++.
T Consensus        25 ~~~~h~C~~C-------gk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~   78 (85)
T 2lv2_A           25 SAECHLCPVC-------GESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINK   78 (85)
T ss_dssp             CCTTEECTTS-------CCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHT
T ss_pred             CCCCEECCCC-------CCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcc
Confidence            6778899988       88999999999999999999999999999999999999999765

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=1.1e-11  Score=98.43  Aligned_cols=56  Identities=21%  Similarity=0.532  Sum_probs=46.0

Q ss_pred             hccCCcccccCcCCccccchhHHHHHHhh-hC---CCceecC-CCCccCChHHHHHHHHHh
Q 010863           75 RKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CG---TREYRCD-CGTLFSRRDSFITHRAFC  130 (498)
Q Consensus        75 ~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hg---ekpy~C~-Cgk~F~~~s~L~~H~~~h  130 (498)
                      .|+++++|+|++|++.|.....|.+|+++ ++   +++|.|. |++.|..+..|.+|++.+
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~   61 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS   61 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHT
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHh
Confidence            37788888888888888888888888888 43   7888888 888888888888888533

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.22  E-value=9.2e-12  Score=102.77  Aligned_cols=56  Identities=14%  Similarity=0.358  Sum_probs=52.3

Q ss_pred             hhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-CCCccCChHHHHHHHH
Q 010863           73 FCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTLFSRRDSFITHRA  128 (498)
Q Consensus        73 ~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-Cgk~F~~~s~L~~H~~  128 (498)
                      +..+...++|.|++|+|.|.++..|++|+++ +++++|.|+ |++.|.++..|.+|++
T Consensus        20 ~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~   77 (85)
T 2lv2_A           20 LGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHIN   77 (85)
T ss_dssp             CSSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHH
T ss_pred             CCCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCc
Confidence            4567788999999999999999999999999 799999999 9999999999999984

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.22  E-value=1e-11  Score=92.42  Aligned_cols=56  Identities=23%  Similarity=0.438  Sum_probs=43.9

Q ss_pred             ccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCc
Q 010863            5 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEK   80 (498)
Q Consensus         5 py~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgek   80 (498)
                      ||+|++|++.|.....|..|+++|.             ++++|.|++|       ++.|.....|.+|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHT-------------DVRPYHCTYC-------NFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTS-------------SCCCEECSSS-------SCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcC-------------CCCCccCCCC-------CchhcCHHHHHHHHHHhcccC
Confidence            5778888888888888888888777             6777888887       778888888888888777765

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=1e-11  Score=98.68  Aligned_cols=66  Identities=15%  Similarity=0.241  Sum_probs=37.6

Q ss_pred             CCCCccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhh-hhccCC
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHF-CRKHGE   79 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~-r~Htge   79 (498)
                      +++++|+|++|++.|..+..|.+|+++|.+          ...+++|.|++|       ++.|.....|.+|+ +.|.++
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~----------~~~~~~~~C~~C-------~k~f~~~~~L~~H~~~~H~~~   65 (78)
T 2d9h_A            3 SGSSGLQCEICGFTCRQKASLNWHQRKHAE----------TVAALRFPCEFC-------GKRFEKPDSVAAHRSKSHPAL   65 (78)
T ss_dssp             CSCCCEECSSSCCEESSHHHHHHHHHHHHH----------HTTTCCEECTTT-------CCEESSHHHHHHHHHHTSTTT
T ss_pred             CCCcCeECCCCCCeeCCHHHHHHHHHHhhc----------cCCCcccCCCCC-------CchhCCHHHHHHHHHHhCCCC
Confidence            356666666666666666666666666640          001456666666       56666666666666 344444


Q ss_pred             cccc
Q 010863           80 KKWK   83 (498)
Q Consensus        80 kp~~   83 (498)
                      ++..
T Consensus        66 ~~~~   69 (78)
T 2d9h_A           66 LLAP   69 (78)
T ss_dssp             SSCC
T ss_pred             CCCc
Confidence            4443

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.19  E-value=4e-12  Score=100.99  Aligned_cols=57  Identities=21%  Similarity=0.340  Sum_probs=52.6

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhh-hccCC-cccccCcCCccccchhHHHHHHhh-hCC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFC-RKHGE-KKWKCDKCSKRYAVQSDWKAHSKT-CGT  106 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r-~Htge-kp~~C~~CgK~F~~~s~L~~H~r~-hge  106 (498)
                      ++++|.|++|       ++.|.....|++|++ .|.++ ++|+|++|++.|.....|.+|+++ |+.
T Consensus        12 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A           12 GEKPYECYIC-------HARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCSEECTTT-------CCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             CCCCeECCCc-------CchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            8999999999       999999999999997 67765 899999999999999999999998 643

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.18  E-value=1.4e-11  Score=91.75  Aligned_cols=53  Identities=19%  Similarity=0.311  Sum_probs=27.3

Q ss_pred             CcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhh
Q 010863           44 KKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        44 ~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      +++|.|++|       ++.|.....|..|+++|+++++|.|++|++.|.....|..|+++
T Consensus         2 ~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   54 (57)
T 3uk3_C            2 SSSRECSYC-------GKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLER   54 (57)
T ss_dssp             ---CBCTTT-------CCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCCccCCCC-------cchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHH
Confidence            345555555       55555555555555555555555555555555555555555544

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.16  E-value=1.8e-11  Score=93.95  Aligned_cols=56  Identities=21%  Similarity=0.444  Sum_probs=41.3

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhh-c-cCCcccccCcCCccccchhHHHHHHhh-hC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCR-K-HGEKKWKCDKCSKRYAVQSDWKAHSKT-CG  105 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~-H-tgekp~~C~~CgK~F~~~s~L~~H~r~-hg  105 (498)
                      ++++|.|++|       ++.|.....|.+|++. | .++++|.|++|++.|.....|..|+++ |+
T Consensus         7 ~~k~~~C~~C-------~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            7 GEHTYRCKVC-------SRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             ETTEEECTTT-------CCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             CCcceECCCC-------cchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            6777777777       6777777777777776 5 467777777777777777777777776 44

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.15  E-value=3.8e-11  Score=90.37  Aligned_cols=56  Identities=32%  Similarity=0.613  Sum_probs=40.6

Q ss_pred             CccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhh-hhccCC
Q 010863            4 NRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHF-CRKHGE   79 (498)
Q Consensus         4 kpy~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~-r~Htge   79 (498)
                      |||+|++|++.|.....|.+|+++|.             ++++|.|++|       ++.|.....|.+|+ +.|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHT-------------NEKPYPCGLC-------NRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTT-------------SSCSEECTTT-------CCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhC-------------CCCCccCCCC-------CCccCCHHHHHHHHHHHcCCc
Confidence            56777777777777777777777776             6677777777       67777777777775 456543

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.14  E-value=3.9e-11  Score=98.50  Aligned_cols=52  Identities=13%  Similarity=0.284  Sum_probs=24.1

Q ss_pred             CCccCChhhHhhhhhh-ccCCcc--------cccCcCCccccchhHHHHHHhh-hCCCceec
Q 010863           60 SRALGDLTGIKKHFCR-KHGEKK--------WKCDKCSKRYAVQSDWKAHSKT-CGTREYRC  111 (498)
Q Consensus        60 ~k~F~~~s~Lk~H~r~-Htgekp--------~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C  111 (498)
                      ++.|.....|.+|+++ |.++++        |.|++|++.|..+..|++|+++ +++++|.|
T Consensus        32 ~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   93 (95)
T 2ej4_A           32 DRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPS   93 (95)
T ss_dssp             CCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSS
T ss_pred             ccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            4444444444444443 444333        4444555555555555555444 34444444

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.11  E-value=5.8e-11  Score=88.30  Aligned_cols=51  Identities=20%  Similarity=0.441  Sum_probs=35.3

Q ss_pred             ceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhh
Q 010863           46 VYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        46 ~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      +|.|++|       ++.|.....|..|+++|+++++|.|++|++.|.....|.+|+++
T Consensus         1 p~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   51 (57)
T 1bbo_A            1 KYICEEC-------GIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKS   51 (57)
T ss_dssp             CCBCTTT-------CCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHS
T ss_pred             CCcCCCC-------cCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHH
Confidence            4666666       66777777777777777777777777777777777777777666

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.08  E-value=8e-11  Score=92.14  Aligned_cols=61  Identities=21%  Similarity=0.531  Sum_probs=45.7

Q ss_pred             Hhhhhh-hccCCcccccC--cCCccccchhHHHHHHhh-hCCCceecC-CCCccCChHHHHHHHHH
Q 010863           69 IKKHFC-RKHGEKKWKCD--KCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTLFSRRDSFITHRAF  129 (498)
Q Consensus        69 Lk~H~r-~Htgekp~~C~--~CgK~F~~~s~L~~H~r~-hgekpy~C~-Cgk~F~~~s~L~~H~~~  129 (498)
                      +..|+. +|.++++|.|+  .|++.|.....|.+|+++ +++++|.|+ |++.|.++..|.+|+++
T Consensus         6 ~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   71 (73)
T 1f2i_G            6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT   71 (73)
T ss_dssp             --CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTT
T ss_pred             ccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHh
Confidence            344433 56778888886  488888888888888887 678888888 88888888888888843

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=5.9e-13  Score=103.68  Aligned_cols=69  Identities=12%  Similarity=0.169  Sum_probs=62.0

Q ss_pred             hHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHH
Q 010863           18 DQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDW   97 (498)
Q Consensus        18 ~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L   97 (498)
                      +..|..|+++|.             ++++|.|++|       ++.|.....|..       +++|.|++|++.|.....|
T Consensus         3 ~~~l~~H~~~h~-------------~~~~~~C~~C-------~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l   55 (73)
T 2ctu_A            3 SGSSGKRQKIHL-------------GDRSQKCSKC-------GIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAAL   55 (73)
T ss_dssp             CCSCCCCCCCCC-------------CCSEEECSSS-------CCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSS
T ss_pred             chhHHHHHHHhC-------------CCCCeeCCcc-------cchhCCHHHhCc-------CCCCCCCCCChhhcCHHHH
Confidence            345677777776             8999999999       899999988887       8899999999999999999


Q ss_pred             HHHHhh-hCCCceecC-C
Q 010863           98 KAHSKT-CGTREYRCD-C  113 (498)
Q Consensus        98 ~~H~r~-hgekpy~C~-C  113 (498)
                      ..|+++ +++++|.|+ |
T Consensus        56 ~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           56 NKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCSSCCCCCCCSSCCCC
T ss_pred             HHHHHhhcCCCCCCCCCC
Confidence            999999 789999998 7

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.06  E-value=1.3e-10  Score=87.43  Aligned_cols=51  Identities=22%  Similarity=0.540  Sum_probs=32.6

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHh
Q 010863           45 KVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSK  102 (498)
Q Consensus        45 k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r  102 (498)
                      ++|.|++|       ++.|.....|.+|+++|+++++|.|++|++.|.....|.+|++
T Consensus         1 k~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   51 (60)
T 2adr_A            1 RSFVCEVC-------TRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQ   51 (60)
T ss_dssp             CCBCCTTT-------CCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHT
T ss_pred             CcCcCCCC-------ccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHH
Confidence            35666666       6666666666666666666666666666666666666666653

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.05  E-value=1.4e-10  Score=90.82  Aligned_cols=55  Identities=20%  Similarity=0.546  Sum_probs=45.9

Q ss_pred             cCcceeCC--CCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhhh
Q 010863           43 RKKVYVCP--EPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTC  104 (498)
Q Consensus        43 ~~k~y~C~--~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~h  104 (498)
                      ++++|.|+  .|       ++.|.....|.+|+++|+++++|.|++|++.|.....|.+|+++|
T Consensus        16 ~~~~~~C~~~~C-------~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           16 KMRPYACPVESC-------DRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCEECSSTTB-------CCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             CCCccCCcCCCC-------CCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            67888886  47       788888888888888888888888888888888888888888763

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=1.4e-10  Score=89.57  Aligned_cols=52  Identities=17%  Similarity=0.292  Sum_probs=32.5

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccC-cCCccccchhHHHHHHhh
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCD-KCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~-~CgK~F~~~s~L~~H~r~  103 (498)
                      ++++|.|++|       ++.|. ...|+.|+++ +++++|.|+ +|++.|..+..|..|+++
T Consensus         7 ~~~~~~C~~C-------~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~   59 (66)
T 2eod_A            7 GKRTQPCTYC-------TKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKD   59 (66)
T ss_dssp             CCCEEECSSS-------CCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHT
T ss_pred             CCCCeecccc-------CCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHh
Confidence            4556666666       56666 6666666666 666666666 666666666666666655

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.02  E-value=2.7e-10  Score=93.38  Aligned_cols=60  Identities=22%  Similarity=0.358  Sum_probs=54.0

Q ss_pred             ccccCcCCccccchhHHHHHHhh-h-CCCc--------eecC-CCCccCChHHHHHHHHHhhhccccccccccCCCCCCC
Q 010863           81 KWKCDKCSKRYAVQSDWKAHSKT-C-GTRE--------YRCD-CGTLFSRRDSFITHRAFCDALAEESTRAITGTNPILS  149 (498)
Q Consensus        81 p~~C~~CgK~F~~~s~L~~H~r~-h-gekp--------y~C~-Cgk~F~~~s~L~~H~~~h~~~~~~s~r~h~~~kp~~C  149 (498)
                      .|.|.+|++.|.....|.+|+++ | ++++        |.|. |++.|..+..|++|+           ++|++++||.|
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~-----------~~H~~~k~~~C   93 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHI-----------RVHTGEKSGPS   93 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHH-----------HHHHTCCCCSS
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHH-----------HhcCCCCCCCC
Confidence            47899999999999999999998 6 5555        9999 999999999999999           67778999999


Q ss_pred             CC
Q 010863          150 SS  151 (498)
Q Consensus       150 ~~  151 (498)
                      ..
T Consensus        94 ~~   95 (95)
T 2ej4_A           94 SG   95 (95)
T ss_dssp             CC
T ss_pred             CC
Confidence            73

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.4e-10  Score=80.80  Aligned_cols=43  Identities=19%  Similarity=0.342  Sum_probs=34.0

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-C
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-C  113 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-C  113 (498)
                      +|+++|+++++|.|++|++.|.....|..|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            577788888888888888888888888888777 677788777 6

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.92  E-value=4.9e-10  Score=79.96  Aligned_cols=43  Identities=19%  Similarity=0.406  Sum_probs=32.9

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-C
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-C  113 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-C  113 (498)
                      +|+++|+++++|.|++|+|.|..+..|.+|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            577777777778888888887777777777777 577777776 5

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.92  E-value=1e-09  Score=85.65  Aligned_cols=54  Identities=24%  Similarity=0.504  Sum_probs=40.3

Q ss_pred             cCcceeCCC--CCCCCCCCCCccCChhhHhhhhhhccCCcccccCc--CCccccchhHHHHHHhh
Q 010863           43 RKKVYVCPE--PNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDK--CSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        43 ~~k~y~C~~--C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~--CgK~F~~~s~L~~H~r~  103 (498)
                      ..++|.|.+  |       ++.|.....|++|+++|+++++|+|.+  |++.|..+..|.+|+++
T Consensus        14 ~~~~~~C~~~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~   71 (72)
T 2epa_A           14 RIRSHICSHPGC-------GKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT   71 (72)
T ss_dssp             CCCCEECSSTTT-------CCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTT
T ss_pred             ccCceeCCCCCC-------ccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhc
Confidence            566777777  6       777777777777777777777777754  77777777777777664

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=4.9e-10  Score=79.71  Aligned_cols=43  Identities=19%  Similarity=0.346  Sum_probs=33.4

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-C
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-C  113 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-C  113 (498)
                      +|+++|+++++|.|++|++.|.++..|.+|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            577777888888888888888888888888777 677777777 6

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.91  E-value=4.7e-10  Score=79.93  Aligned_cols=43  Identities=26%  Similarity=0.476  Sum_probs=30.6

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-C
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-C  113 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-C  113 (498)
                      +|+++|+++++|.|++|+|.|..+..|.+|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            466777777777777777777777777777776 566777776 5

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=4.6e-10  Score=79.97  Aligned_cols=42  Identities=21%  Similarity=0.400  Sum_probs=31.6

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +|+++|+++++|.|++|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS   44 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCS
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence            577777777777777777777777777777777 577777776

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=6.2e-10  Score=79.19  Aligned_cols=43  Identities=28%  Similarity=0.473  Sum_probs=33.9

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-C
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-C  113 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-C  113 (498)
                      +|+++|+++++|.|++|++.|..+..|.+|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            577778888888888888888888888888777 677778877 6

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=5.3e-10  Score=79.65  Aligned_cols=43  Identities=26%  Similarity=0.376  Sum_probs=33.1

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-C
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-C  113 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-C  113 (498)
                      +|+++|+++++|+|++|++.|..+..|.+|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            577777777888888888888877777777777 577777776 5

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=5.4e-10  Score=79.63  Aligned_cols=42  Identities=21%  Similarity=0.410  Sum_probs=28.8

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +|+++|+++++|.|++|+|.|..+..|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCC
Confidence            466667777777777777777777777777666 566666666

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.91  E-value=5.3e-10  Score=79.68  Aligned_cols=43  Identities=23%  Similarity=0.467  Sum_probs=29.7

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-C
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-C  113 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-C  113 (498)
                      +|+++|+++++|+|++|++.|..+..|.+|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            466667777777777777777777777777666 566667666 5

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=5e-10  Score=79.81  Aligned_cols=43  Identities=19%  Similarity=0.403  Sum_probs=29.8

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-C
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-C  113 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-C  113 (498)
                      +|+++|+++++|.|++|++.|.....|.+|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            466677777777777777777777777777666 566667666 5

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=5.3e-10  Score=79.66  Aligned_cols=43  Identities=19%  Similarity=0.409  Sum_probs=32.0

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-C
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-C  113 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-C  113 (498)
                      +|+++|+++++|+|++|+|.|..+..|.+|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            467777777777777777777777777777777 567777776 5

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=5.4e-10  Score=79.62  Aligned_cols=43  Identities=21%  Similarity=0.372  Sum_probs=32.8

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-C
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-C  113 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-C  113 (498)
                      +|+++|+++++|.|++|++.|.....|.+|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            577777777777777777777777777777777 677777776 5

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=5.5e-10  Score=79.46  Aligned_cols=43  Identities=21%  Similarity=0.371  Sum_probs=30.2

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-C
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-C  113 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-C  113 (498)
                      +|+++|+++++|.|++|+|.|..+..|.+|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            466677777777777777777777777777766 566677776 5

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.90  E-value=5.1e-10  Score=79.65  Aligned_cols=43  Identities=19%  Similarity=0.417  Sum_probs=29.6

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-C
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-C  113 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-C  113 (498)
                      +|+++|+++++|.|++|+|.|.....|.+|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            466667777777777777777777777777666 566667666 5

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=5e-10  Score=79.79  Aligned_cols=43  Identities=21%  Similarity=0.408  Sum_probs=30.7

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-C
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-C  113 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-C  113 (498)
                      +|+++|+++++|.|++|++.|..+..|.+|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            466777777777777777777777777777776 566777776 5

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=5.3e-10  Score=79.53  Aligned_cols=43  Identities=19%  Similarity=0.375  Sum_probs=30.3

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-C
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-C  113 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-C  113 (498)
                      +|+++|+++++|.|++|++.|..+..|++|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            466777777777777777777777777777766 566777776 5

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=5.4e-10  Score=79.50  Aligned_cols=43  Identities=21%  Similarity=0.424  Sum_probs=30.5

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-C
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-C  113 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-C  113 (498)
                      +|+++|+++++|.|++|++.|.....|.+|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            566777777777777777777777777777766 566777776 5

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=6.4e-10  Score=79.10  Aligned_cols=43  Identities=23%  Similarity=0.446  Sum_probs=31.6

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-C
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-C  113 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-C  113 (498)
                      +|+++|+++++|.|++|++.|.....|.+|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            467777777777777777777777777777777 567777776 5

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=5.6e-10  Score=79.54  Aligned_cols=43  Identities=21%  Similarity=0.364  Sum_probs=32.0

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-C
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-C  113 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-C  113 (498)
                      +|+++|+++++|.|++|+|.|..+..|.+|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            467777777777777777777777777777777 577777776 5

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=5.4e-10  Score=79.48  Aligned_cols=43  Identities=23%  Similarity=0.439  Sum_probs=32.2

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-C
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-C  113 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-C  113 (498)
                      +|+++|+++++|+|++|++.|.....|.+|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467777777777777777777777777777777 577777776 5

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.89  E-value=7.7e-10  Score=78.91  Aligned_cols=43  Identities=26%  Similarity=0.411  Sum_probs=32.8

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-C
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-C  113 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-C  113 (498)
                      .|+++|+++++|+|++|+|.|..+..|.+|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467777777788888888888777777777777 577777776 6

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=4.8e-10  Score=80.00  Aligned_cols=43  Identities=14%  Similarity=0.349  Sum_probs=29.1

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-C
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-C  113 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-C  113 (498)
                      +|+++|+++++|.|++|++.|.....|.+|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            466667777777777777777776666666666 566666666 5

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=5.3e-10  Score=79.66  Aligned_cols=43  Identities=23%  Similarity=0.430  Sum_probs=32.2

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-C
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-C  113 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-C  113 (498)
                      +|+++|+++++|.|++|++.|..+..|.+|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            467777777777777777777777777777777 577777776 5

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=6.9e-10  Score=78.30  Aligned_cols=41  Identities=22%  Similarity=0.355  Sum_probs=26.9

Q ss_pred             hhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           72 HFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        72 H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      |+++|+++++|+|++|+|.|..+..|++|+++ +++++|.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS   42 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            45666666666666666666666666666666 566666665

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=6.3e-10  Score=79.26  Aligned_cols=43  Identities=23%  Similarity=0.416  Sum_probs=31.1

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-C
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-C  113 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-C  113 (498)
                      +|+++|+++++|.|++|++.|..+..|.+|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            466777777777777777777777777777777 567777776 5

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=6.7e-10  Score=79.25  Aligned_cols=42  Identities=21%  Similarity=0.417  Sum_probs=27.4

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      .|+++|+++++|+|++|+|.|..+..|++|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            356666666666666666666666666666666 466666665

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=7.8e-10  Score=78.78  Aligned_cols=41  Identities=20%  Similarity=0.375  Sum_probs=27.2

Q ss_pred             hhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           72 HFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        72 H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      |+++|+++++|.|++|+|.|.....|++|+++ +++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCC
Confidence            56666666666666666666666666666666 566666665

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=7.4e-10  Score=78.89  Aligned_cols=43  Identities=23%  Similarity=0.431  Sum_probs=31.5

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-C
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-C  113 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-C  113 (498)
                      +|+++|+++++|.|++|++.|.....|.+|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            467777777777777777777777777777777 567777776 5

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=6.1e-10  Score=79.21  Aligned_cols=43  Identities=23%  Similarity=0.362  Sum_probs=31.4

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-C
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-C  113 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-C  113 (498)
                      +|+++|+++++|.|++|+|.|.....|.+|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467777777777777777777777777777777 567777776 5

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=6.6e-10  Score=79.18  Aligned_cols=42  Identities=24%  Similarity=0.427  Sum_probs=27.6

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      .|+++|+++++|.|++|++.|..+..|++|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCC
Confidence            366666666666666666666666666666666 466666665

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=9.2e-10  Score=78.51  Aligned_cols=41  Identities=22%  Similarity=0.408  Sum_probs=27.4

Q ss_pred             hhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           72 HFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        72 H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      |+++|+++++|.|++|++.|..+..|.+|+++ +++++|.|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS   44 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            56666666666666666666666666666666 566666665

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=5.6e-10  Score=79.54  Aligned_cols=43  Identities=26%  Similarity=0.518  Sum_probs=32.2

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-C
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-C  113 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-C  113 (498)
                      +|+++|+++++|.|++|++.|.....|.+|+++ +++++|.|+ |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            577777777777777777777777777777777 567777776 5

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=6.2e-10  Score=79.29  Aligned_cols=42  Identities=24%  Similarity=0.396  Sum_probs=25.9

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +|+++|+++++|.|++|++.|..+..|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCS
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            355666666666666666666666666666665 455666665

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=6.1e-10  Score=79.21  Aligned_cols=42  Identities=24%  Similarity=0.424  Sum_probs=27.6

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +|+++|+++++|.|++|++.|.....|++|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS   44 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCS
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            466666666666666666666666666666666 466666665

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.88  E-value=7.3e-10  Score=78.82  Aligned_cols=42  Identities=21%  Similarity=0.388  Sum_probs=27.7

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      .|+++|+++++|.|++|++.|.....|++|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTT
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCC
Confidence            466666666666666666666666666666666 566666665

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=1.1e-09  Score=84.50  Aligned_cols=54  Identities=20%  Similarity=0.448  Sum_probs=49.4

Q ss_pred             ccCCcccccCcCCccccchhHHHHHHhhhCCCceecC--CCCccCChHHHHHHHHHh
Q 010863           76 KHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCD--CGTLFSRRDSFITHRAFC  130 (498)
Q Consensus        76 Htgekp~~C~~CgK~F~~~s~L~~H~r~hgekpy~C~--Cgk~F~~~s~L~~H~~~h  130 (498)
                      ..++++|.|++|++.|. ...|+.|++++++++|.|+  |++.|..+..|.+|+++|
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~~~~~p~~C~~~C~k~f~~~~~L~~H~~~h   60 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGHLKDS   60 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHHCSSSEEECTTCCSCCEEETTTHHHHHHTT
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHHcCCcCccCCcccCcccccHHHHHHHHHhh
Confidence            45688999999999999 9999999988899999998  999999999999999543

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=9e-10  Score=78.55  Aligned_cols=41  Identities=24%  Similarity=0.421  Sum_probs=26.2

Q ss_pred             hhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           72 HFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        72 H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      |+++|+++++|.|++|+|.|.++..|.+|+++ +++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS   44 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCC
Confidence            55666666666666666666666666666666 456666665

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.1e-09  Score=78.27  Aligned_cols=43  Identities=26%  Similarity=0.411  Sum_probs=32.8

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-C
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-C  113 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-C  113 (498)
                      .|+++|+++++|+|++|+|.|.+...|++|+++ +++++|.|+ |
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367777777788888888888877777777777 677777776 6

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=8.2e-10  Score=78.65  Aligned_cols=42  Identities=24%  Similarity=0.449  Sum_probs=29.8

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +|+++|+++++|.|++|++.|..+..|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTT
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            466777777777777777777777777777766 566777775

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=8.7e-10  Score=78.53  Aligned_cols=41  Identities=24%  Similarity=0.472  Sum_probs=24.5

Q ss_pred             hhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           72 HFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        72 H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      |+++|+++++|.|++|+|.|..+..|.+|+++ +++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTT
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            55556666666666666666666666666555 455556555

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.85  E-value=1.5e-09  Score=84.75  Aligned_cols=56  Identities=30%  Similarity=0.627  Sum_probs=50.9

Q ss_pred             hhccCCcccccCc--CCccccchhHHHHHHhh-hCCCceec--C-CCCccCChHHHHHHHHH
Q 010863           74 CRKHGEKKWKCDK--CSKRYAVQSDWKAHSKT-CGTREYRC--D-CGTLFSRRDSFITHRAF  129 (498)
Q Consensus        74 r~Htgekp~~C~~--CgK~F~~~s~L~~H~r~-hgekpy~C--~-Cgk~F~~~s~L~~H~~~  129 (498)
                      ..+...++|.|.+  |++.|.....|++|+++ +++++|.|  + |++.|..+..|.+|+++
T Consensus        10 ~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~   71 (72)
T 2epa_A           10 IDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT   71 (72)
T ss_dssp             CCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTT
T ss_pred             CCccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhc
Confidence            3456788999998  99999999999999999 78999999  5 99999999999999854

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=7.9e-10  Score=78.74  Aligned_cols=43  Identities=26%  Similarity=0.446  Sum_probs=32.8

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-C
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-C  113 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-C  113 (498)
                      +|+++|+++++|.|++|++.|.....|.+|+++ +++++|.|+ |
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            567777777777787777777777777777777 577777776 5

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.85  E-value=1.1e-09  Score=78.08  Aligned_cols=42  Identities=14%  Similarity=0.286  Sum_probs=26.1

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +|+++|+++++|.|++|+|.|..+..|.+|+++ +++++|.|+
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS   44 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            355666666666666666666666666666666 456666665

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=1.2e-09  Score=77.79  Aligned_cols=43  Identities=14%  Similarity=0.190  Sum_probs=30.0

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-C
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-C  113 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-C  113 (498)
                      .|+++|+++++|.|++|++.|.....|.+|+++ +++++|.|. |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            466677777777777777777777777777766 566777776 5

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=6.4e-10  Score=79.25  Aligned_cols=42  Identities=24%  Similarity=0.463  Sum_probs=22.0

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +|+++|+++++|.|++|++.|..+..|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            345555555555555555555555555555555 345555554

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=1.2e-09  Score=77.69  Aligned_cols=43  Identities=23%  Similarity=0.457  Sum_probs=28.5

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-C
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-C  113 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-C  113 (498)
                      .|+++|+++++|.|++|+|.|.....|.+|+++ +++++|.|+ |
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            356666666667776677666666666666666 566666666 5

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.3e-09  Score=77.68  Aligned_cols=43  Identities=16%  Similarity=0.301  Sum_probs=29.1

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHh-h-hCCCceecC-C
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSK-T-CGTREYRCD-C  113 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r-~-hgekpy~C~-C  113 (498)
                      .|+++|+++++|.|++|++.|.....|.+|++ + .++++|.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            36666777777777777777777777777766 5 466666666 5

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=9.8e-10  Score=78.24  Aligned_cols=41  Identities=32%  Similarity=0.532  Sum_probs=26.5

Q ss_pred             hhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           72 HFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        72 H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      |+++|+++++|+|++|++.|..+..|.+|+++ +++++|.|+
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCS
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCC
Confidence            56666666666666666666666666666666 456666665

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.6e-09  Score=77.29  Aligned_cols=42  Identities=26%  Similarity=0.410  Sum_probs=28.8

Q ss_pred             hhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-C
Q 010863           72 HFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-C  113 (498)
Q Consensus        72 H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-C  113 (498)
                      |+++|+++++|.|++|++.|..+..|++|+++ +++++|.|+ |
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            56666777777777777777777777777666 566667666 5

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.80  E-value=2.6e-09  Score=79.18  Aligned_cols=45  Identities=16%  Similarity=0.269  Sum_probs=33.5

Q ss_pred             ccCcceeCCCCCCCCCCCCCccCChhhHhhhhh-hccCCcccccCcCCccccc
Q 010863           42 IRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFC-RKHGEKKWKCDKCSKRYAV   93 (498)
Q Consensus        42 ~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r-~Htgekp~~C~~CgK~F~~   93 (498)
                      .++++|.|++|       ++.|.....|++|++ +|+++++|+|++|++.|..
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            8 SVGKPYICQSC-------GKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CSSCCEECSSS-------CCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCeECCCC-------CcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            36677777777       777777777777776 7777777777777777764

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.80  E-value=3.3e-09  Score=78.62  Aligned_cols=45  Identities=22%  Similarity=0.462  Sum_probs=41.4

Q ss_pred             CCCCccccCccCcccCChHHHHHHHH-hcCCCccccccccccccCcceeCCCCCCCCCCCCCccCC
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRR-GHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGD   65 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r-~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~   65 (498)
                      +++++|+|++|++.|.....|.+|++ +|.             ++++|.|++|       ++.|..
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~-------------~~k~~~C~~C-------~k~F~~   53 (54)
T 2eps_A            8 SVGKPYICQSCGKGFSRPDHLNGHIKQVHT-------------SERPHKCQVW-------VSGPSS   53 (54)
T ss_dssp             CSSCCEECSSSCCEESSHHHHHHHHHHTSC-------------CCCCCCSSSS-------CCSSCC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHhcC-------------CCCCccCCCC-------CCCCCC
Confidence            46899999999999999999999997 898             8999999999       899875

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.80  E-value=1.1e-09  Score=77.99  Aligned_cols=38  Identities=18%  Similarity=0.227  Sum_probs=37.0

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|++|
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            9 GEKTWKCREC-------DMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSS-------CCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCeECCCC-------CcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            8999999999       9999999999999999999999999988

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.80  E-value=5.4e-10  Score=85.62  Aligned_cols=52  Identities=21%  Similarity=0.339  Sum_probs=40.0

Q ss_pred             HhhhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-CCCccCChHHH
Q 010863           69 IKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTLFSRRDSF  123 (498)
Q Consensus        69 Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-Cgk~F~~~s~L  123 (498)
                      |..|+++|+++++|.|++|++.|.....|.   ++ .++++|.|+ |++.|....++
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            567888888888888888888888877775   45 677888888 88888766543

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.1e-09  Score=76.59  Aligned_cols=42  Identities=21%  Similarity=0.411  Sum_probs=29.6

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      .|+++|+++++|.|++|++.|..+..|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSS
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            366677777777777777777777777777776 566777775

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.1e-09  Score=78.00  Aligned_cols=38  Identities=18%  Similarity=0.202  Sum_probs=37.1

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|++|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            9 GEKPYECSVC-------GKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             SCCSEECSSS-------CCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CCCCeeCCCc-------CCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.79  E-value=1e-09  Score=78.29  Aligned_cols=38  Identities=26%  Similarity=0.292  Sum_probs=37.1

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|++|
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            9 GEKPYECKEC-------GKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCSCBCSSS-------CCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCceECCCC-------CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.79  E-value=1.2e-09  Score=77.78  Aligned_cols=38  Identities=21%  Similarity=0.249  Sum_probs=37.0

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|++|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            9 GEKRYKCNEC-------GKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             TSCCEECSSS-------CCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCcCcCCCCC-------cchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.6e-09  Score=77.17  Aligned_cols=38  Identities=21%  Similarity=0.201  Sum_probs=37.0

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|+|++|
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            9 GGKHFECTEC-------GKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCEECSSS-------CCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             CCCCeECCCC-------CchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.79  E-value=2.3e-09  Score=74.62  Aligned_cols=41  Identities=20%  Similarity=0.460  Sum_probs=30.4

Q ss_pred             hhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           72 HFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        72 H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      |+++|+++++|.|++|++.|.+...|.+|+++ +++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            56677777777777777777777777777777 577777773

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.7e-09  Score=77.02  Aligned_cols=38  Identities=24%  Similarity=0.270  Sum_probs=37.1

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|.....|++|+++|+++++|.|++|
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            9 GKKPYKCNEC-------GKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCBCTTT-------CCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCeECCCC-------CCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.1e-09  Score=76.52  Aligned_cols=42  Identities=26%  Similarity=0.464  Sum_probs=33.6

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +|+++|+++++|.|++|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            577788888888888888888888888888877 677888775

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.5e-09  Score=76.09  Aligned_cols=42  Identities=19%  Similarity=0.429  Sum_probs=32.7

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +|+++|+++++|.|++|++.|..+..|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            577778888888888888888888888888777 577777775

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.78  E-value=1.2e-09  Score=77.74  Aligned_cols=38  Identities=16%  Similarity=0.121  Sum_probs=37.0

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|++|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            9 GVKPYGCSQC-------AKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------SCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             CCCceECCCC-------CchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.6e-09  Score=77.07  Aligned_cols=39  Identities=23%  Similarity=0.308  Sum_probs=37.4

Q ss_pred             ccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           42 IRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        42 ~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      .++++|.|++|       ++.|.....|++|+++|+++++|+|++|
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            8 TGEKPFDCIDC-------GKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSBCCTTT-------CCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCCeECCCC-------CceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            38999999999       9999999999999999999999999988

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=3.1e-09  Score=73.89  Aligned_cols=41  Identities=17%  Similarity=0.325  Sum_probs=32.6

Q ss_pred             hhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           72 HFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        72 H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      |+++|+++++|.|++|++.|.....|.+|+++ +++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            56778888888888888888888888888887 677888773

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.6e-09  Score=76.03  Aligned_cols=42  Identities=24%  Similarity=0.419  Sum_probs=31.8

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +|+++|+++++|+|++|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            467777777778887787777777777777777 577777774

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.4e-09  Score=76.26  Aligned_cols=42  Identities=24%  Similarity=0.529  Sum_probs=32.9

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +|+++|+++++|.|++|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            577778888888888888888888888888777 577777775

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.1e-09  Score=77.85  Aligned_cols=38  Identities=16%  Similarity=0.118  Sum_probs=37.1

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|+|++|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            9 GERPHKCNEC-------GKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------CCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCCCeeCCCC-------ChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999998

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.3e-09  Score=77.51  Aligned_cols=38  Identities=16%  Similarity=0.071  Sum_probs=37.0

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|++|
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            9 GEKPHECREC-------GKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCBCTTT-------CCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCCCeeCCCC-------CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.4e-09  Score=75.24  Aligned_cols=42  Identities=21%  Similarity=0.379  Sum_probs=34.4

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +|+++|+++++|.|++|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            577888888888888888888888888888887 677888874

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.7e-09  Score=75.76  Aligned_cols=42  Identities=21%  Similarity=0.434  Sum_probs=32.3

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +|+++|+++++|.|++|++.|..+..|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            577777788888888888888888888887777 577777775

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.1e-09  Score=77.87  Aligned_cols=38  Identities=24%  Similarity=0.276  Sum_probs=37.0

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|++|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            9 GEKLYNCKEC-------GKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCBTTT-------TBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCCCeECCCC-------CCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            8999999999       8999999999999999999999999988

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.9e-09  Score=76.79  Aligned_cols=39  Identities=18%  Similarity=0.182  Sum_probs=37.4

Q ss_pred             ccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           42 IRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        42 ~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      .++++|.|++|       ++.|..+..|++|+++|+++++|+|++|
T Consensus         8 ~~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            8 SVEKPYKCEDC-------GKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSSCBCSSS-------CCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCeeCccc-------CchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            38999999999       9999999999999999999999999998

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=1.8e-09  Score=76.81  Aligned_cols=39  Identities=21%  Similarity=0.191  Sum_probs=37.4

Q ss_pred             ccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           42 IRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        42 ~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      .++++|.|++|       ++.|.....|++|+++|+++++|+|++|
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            8 TGEKPYKCEEC-------GKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSEECSSS-------CCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCcCccCCCc-------cchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            38999999999       9999999999999999999999999988

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.6e-09  Score=77.08  Aligned_cols=38  Identities=21%  Similarity=0.234  Sum_probs=37.1

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|++|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            9 GEKPYKCNEC-------GKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSEECSSS-------CCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CCCCeECCCC-------CchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999998

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=1.3e-09  Score=77.51  Aligned_cols=38  Identities=18%  Similarity=0.176  Sum_probs=37.0

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|++|
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            9 GEKSHTCDEC-------GKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCSSEECTTT-------CCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CCCCeECCCc-------CcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.3e-09  Score=77.56  Aligned_cols=38  Identities=18%  Similarity=0.222  Sum_probs=37.1

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|++|
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            9 GEKPFKCGEC-------GKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCSEECTTT-------CCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCeECCCC-------CcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999998

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.1e-09  Score=77.97  Aligned_cols=38  Identities=24%  Similarity=0.302  Sum_probs=37.1

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|++|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            9 GVKPYMCNEC-------GKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------CCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CCcCeECCCC-------CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.4e-09  Score=77.40  Aligned_cols=38  Identities=21%  Similarity=0.211  Sum_probs=37.0

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|.|++|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            9 GEKPYICAEC-------GKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SCCSEECSSS-------CCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CCcCeECCCC-------ChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.3e-09  Score=77.53  Aligned_cols=38  Identities=16%  Similarity=0.214  Sum_probs=37.0

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|++|
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            9 GEKPYKCSDC-------GKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             SCCSCBCSSS-------CCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCccCCcc-------ChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.6e-09  Score=75.91  Aligned_cols=42  Identities=26%  Similarity=0.487  Sum_probs=32.1

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +|+++|+++++|.|++|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            577777777788888888888877777777777 677777774

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.77  E-value=2.6e-09  Score=76.13  Aligned_cols=42  Identities=21%  Similarity=0.487  Sum_probs=31.8

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      .|+++|+++++|.|++|++.|..+..|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            467777777777787787777777777777777 577777775

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.77  E-value=2e-09  Score=76.44  Aligned_cols=38  Identities=24%  Similarity=0.215  Sum_probs=37.1

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|++|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            9 GEKPYNCKEC-------GKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------CCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCcCeECCcc-------ccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2e-09  Score=76.72  Aligned_cols=39  Identities=23%  Similarity=0.255  Sum_probs=37.4

Q ss_pred             ccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           42 IRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        42 ~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      .++++|.|++|       ++.|..+..|++|+++|+++++|+|++|
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            8 AGEKPYGCSEC-------GKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSCBCSSS-------CCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCCCcCCCcc-------ChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            38999999999       9999999999999999999999999988

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.4e-09  Score=76.30  Aligned_cols=42  Identities=21%  Similarity=0.449  Sum_probs=31.1

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +|+++|+++++|+|++|+|.|..+..|++|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            467777777777777777777777777777777 567777775

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.2e-09  Score=76.54  Aligned_cols=42  Identities=17%  Similarity=0.333  Sum_probs=34.4

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +|+++|+++++|.|++|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            577888888888888888888888888888888 677888875

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.8e-09  Score=74.90  Aligned_cols=42  Identities=24%  Similarity=0.497  Sum_probs=34.7

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +|+++|+++++|.|++|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            577888888888888888888888888888888 678888874

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.2e-09  Score=77.77  Aligned_cols=38  Identities=24%  Similarity=0.315  Sum_probs=37.0

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|+|++|
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            9 GERPYICTVC-------GKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECTTT-------CCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCcCCCCC-------CchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=1.3e-09  Score=77.60  Aligned_cols=38  Identities=21%  Similarity=0.213  Sum_probs=37.1

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|++|
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            9 GENPYECHEC-------GKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             SSCCEECSSS-------CCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCcCcCCCCC-------CcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=1.3e-09  Score=77.57  Aligned_cols=38  Identities=21%  Similarity=0.298  Sum_probs=37.1

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|..+..|.+|+++|+++++|+|++|
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            9 GEKPYKCNEC-------GKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCSEECSSS-------CCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCCCEeCCcC-------CCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=1.8e-09  Score=76.82  Aligned_cols=39  Identities=21%  Similarity=0.239  Sum_probs=37.4

Q ss_pred             ccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           42 IRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        42 ~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      .++++|.|++|       ++.|.....|.+|+++|+++++|+|++|
T Consensus         8 ~~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            8 TGEKPYKCHEC-------GKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             TCCCCEECTTT-------CCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCCCeECCCC-------CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            38999999999       9999999999999999999999999998

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.5e-09  Score=76.18  Aligned_cols=42  Identities=26%  Similarity=0.491  Sum_probs=34.2

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +|+++|+++++|+|++|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            577888888888888888888888888888887 677888875

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.7e-09  Score=75.93  Aligned_cols=42  Identities=24%  Similarity=0.473  Sum_probs=31.3

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +|+++|+++++|.|++|++.|..+..|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            467777777777777777777777777777777 567777774

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.8e-09  Score=75.85  Aligned_cols=42  Identities=24%  Similarity=0.429  Sum_probs=31.5

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +|+++|+++++|.|++|++.|..+..|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            467777777777777777777777777777777 567777774

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.76  E-value=2.4e-09  Score=79.29  Aligned_cols=51  Identities=14%  Similarity=0.156  Sum_probs=46.6

Q ss_pred             CCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCcee
Q 010863           60 SRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYR  110 (498)
Q Consensus        60 ~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~  110 (498)
                      +|.|.....|..|+++|+++++|.|++|++.|.....|..|+++ +++++|.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            68889999999999999999999999999999999999999999 7888873

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=1.4e-09  Score=77.50  Aligned_cols=38  Identities=21%  Similarity=0.159  Sum_probs=37.1

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|++|
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            9 STKSHQCHEC-------GRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSEECSSS-------CCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCCCeECCcC-------CCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999998

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=1.7e-09  Score=76.17  Aligned_cols=39  Identities=15%  Similarity=0.063  Sum_probs=37.4

Q ss_pred             ccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           42 IRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        42 ~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      .++++|.|++|       ++.|.....|++|+++|+++++|.|++|
T Consensus         6 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            6 SGEKPFGCSCC-------EKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             SSCCCEECSSS-------SCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCcCccCCCC-------CcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            38999999999       9999999999999999999999999988

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=3.2e-09  Score=75.62  Aligned_cols=42  Identities=26%  Similarity=0.482  Sum_probs=30.9

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +|+++|+++++|+|++|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            467777777777777777777777777777777 567777774

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.1e-09  Score=76.35  Aligned_cols=38  Identities=24%  Similarity=0.307  Sum_probs=37.1

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|.|++|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            9 GEKPYKCNEC-------GKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCTTCCTTT-------CCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCcCCCCC-------CCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999998

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.75  E-value=1.7e-09  Score=77.06  Aligned_cols=39  Identities=18%  Similarity=0.233  Sum_probs=37.4

Q ss_pred             ccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           42 IRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        42 ~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      .++++|.|++|       ++.|..+..|++|+++|+++++|+|++|
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            8 TGEKPFKCVEC-------GKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSBCCSSS-------CCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCcccCcc-------CcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            38999999999       9999999999999999999999999988

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=3.3e-09  Score=75.46  Aligned_cols=42  Identities=21%  Similarity=0.400  Sum_probs=30.3

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      .|+++|+++++|.|++|++.|..+..|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            466777777777777777777777777777777 567777764

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=3.4e-09  Score=75.51  Aligned_cols=42  Identities=17%  Similarity=0.411  Sum_probs=31.7

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      .|+++|+++++|+|++|+|.|.....|++|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            467777777777777777777777777777777 577777774

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=3.9e-09  Score=75.17  Aligned_cols=42  Identities=21%  Similarity=0.442  Sum_probs=33.1

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +|+++|+++++|.|++|+|.|..+..|.+|+++ +++++|.|+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            477778888888888888888888888888777 677778775

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=3e-09  Score=75.59  Aligned_cols=42  Identities=21%  Similarity=0.436  Sum_probs=30.1

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +|+++|+++++|.|++|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            466777777777777777777777777777776 566777764

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.9e-09  Score=75.64  Aligned_cols=42  Identities=24%  Similarity=0.480  Sum_probs=29.8

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +|+++|+++++|.|++|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            466777777777777777777777777777776 566777664

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.6e-09  Score=75.16  Aligned_cols=42  Identities=21%  Similarity=0.412  Sum_probs=35.1

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      .|+++|+++++|.|++|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            478888888888888888888888888888888 678888884

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=3.2e-09  Score=74.77  Aligned_cols=42  Identities=19%  Similarity=0.366  Sum_probs=35.0

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +|+++|+++++|.|++|++.|.....|.+|+++ +++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            578888888888888888888888888888888 678888874

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.3e-09  Score=76.28  Aligned_cols=38  Identities=18%  Similarity=0.196  Sum_probs=37.0

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|++|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            9 GEKPYECSIC-------GKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------CCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCcCcCCCCC-------CcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.1e-09  Score=76.45  Aligned_cols=38  Identities=13%  Similarity=0.154  Sum_probs=37.0

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|..+..|.+|+++|+++++|.|++|
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            9 GEKPFKCDIC-------GKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCSSS-------CCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCcCCCcC-------CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=4.1e-09  Score=75.09  Aligned_cols=42  Identities=19%  Similarity=0.416  Sum_probs=32.2

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      .|+++|+++++|+|++|++.|.....|.+|+++ +++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            367777788888888888888888888888777 677777774

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.5e-09  Score=75.97  Aligned_cols=38  Identities=26%  Similarity=0.286  Sum_probs=37.1

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|++|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            9 GEKPYVCDYC-------GKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------CCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCeECCCC-------ChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999998

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.4e-09  Score=74.44  Aligned_cols=41  Identities=22%  Similarity=0.468  Sum_probs=30.5

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceec
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRC  111 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C  111 (498)
                      +|+++|+++++|.|++|++.|.....|.+|+++ +++++|.|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            366777777777777777777777777777777 57777776

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.9e-09  Score=75.66  Aligned_cols=42  Identities=21%  Similarity=0.486  Sum_probs=30.2

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +|+++|+++++|.|++|++.|..+..|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            466777777777777777777777777777776 566777764

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=1.8e-09  Score=76.79  Aligned_cols=38  Identities=18%  Similarity=0.191  Sum_probs=37.1

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|++|
T Consensus         9 ~~~~~~C~~C-------~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            9 GEKPYKCNEC-------GKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCSSEETTT-------TEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCeECCCc-------ChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       8999999999999999999999999998

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=3.4e-09  Score=75.40  Aligned_cols=42  Identities=19%  Similarity=0.431  Sum_probs=30.8

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      .|+++|+++++|.|++|+|.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            467777777777777777777777777777777 567777774

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.1e-09  Score=76.47  Aligned_cols=38  Identities=21%  Similarity=0.225  Sum_probs=37.0

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|++|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            9 GEKPYKCSEC-------GKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------CCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCcCeECCCC-------CCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=1.9e-09  Score=76.77  Aligned_cols=38  Identities=26%  Similarity=0.287  Sum_probs=36.7

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|..+..|.+|+++|+++++|+|++|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            9 GEKPYRCAEC-------GKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------CCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCeECCCC-------CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999876

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=3.6e-09  Score=75.16  Aligned_cols=42  Identities=21%  Similarity=0.468  Sum_probs=32.3

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      .|+++|+++++|.|++|++.|.....|++|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            477777778888888888888888888888777 677777775

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=1.8e-09  Score=76.82  Aligned_cols=38  Identities=18%  Similarity=0.216  Sum_probs=37.1

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|++|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            9 GEKPYKCNEC-------GKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCSSEECSSS-------CCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CCCCeECCcC-------CchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=2.5e-09  Score=76.05  Aligned_cols=39  Identities=18%  Similarity=0.139  Sum_probs=37.4

Q ss_pred             ccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           42 IRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        42 ~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      .++++|.|++|       ++.|.....|.+|+++|+++++|+|++|
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            8 SGEKPFKCEEC-------GKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSEECSSS-------CCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCcCCCCC-------CCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            38999999999       9999999999999999999999999988

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=3.6e-09  Score=75.39  Aligned_cols=42  Identities=19%  Similarity=0.400  Sum_probs=35.1

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +|+++|+++++|+|++|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            578888888888888888888888888888888 678888885

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=2.9e-09  Score=74.99  Aligned_cols=42  Identities=19%  Similarity=0.404  Sum_probs=31.1

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +|+++|+++++|.|++|++.|.....|..|+++ .++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            567777777777777777777777777777777 567777774

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=2.3e-09  Score=76.41  Aligned_cols=38  Identities=21%  Similarity=0.311  Sum_probs=37.1

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|++|
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            9 GERPYGCNEC-------GKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCEECSSS-------CCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCEEcccc-------CcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=2.3e-09  Score=76.13  Aligned_cols=38  Identities=16%  Similarity=0.062  Sum_probs=37.0

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|++|
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            9 GEKPCKCTEC-------GKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------CCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CCCCeeCCCC-------CCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=3.6e-09  Score=73.66  Aligned_cols=40  Identities=25%  Similarity=0.472  Sum_probs=32.3

Q ss_pred             hhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceec
Q 010863           72 HFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRC  111 (498)
Q Consensus        72 H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C  111 (498)
                      |+++|+++++|.|++|++.|.....|.+|+++ +++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            67778888888888888888888888888877 67788877

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=2.7e-09  Score=75.91  Aligned_cols=39  Identities=18%  Similarity=0.152  Sum_probs=37.4

Q ss_pred             ccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           42 IRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        42 ~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      .++++|.|++|       ++.|.....|++|+++|+++++|+|.+|
T Consensus         8 ~~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            8 SREKSHQCREC-------GEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             SCCCCEECTTT-------CCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CCCCCEEcccc-------ChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            38999999999       9999999999999999999999999988

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=2e-09  Score=76.66  Aligned_cols=39  Identities=15%  Similarity=0.181  Sum_probs=37.4

Q ss_pred             ccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           42 IRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        42 ~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      .++++|.|++|       ++.|.....|++|+++|+++++|+|++|
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            8 TGEKPYKCEKC-------GKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             SSCCSEEETTT-------TEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCCCeECCCC-------CCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            38999999999       8999999999999999999999999998

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.72  E-value=4.9e-09  Score=72.82  Aligned_cols=40  Identities=15%  Similarity=0.370  Sum_probs=32.0

Q ss_pred             hhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceec
Q 010863           72 HFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRC  111 (498)
Q Consensus        72 H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C  111 (498)
                      |+++|+++++|.|++|++.|..+..|++|+++ +++++|.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            66778888888888888888888888888877 67778777

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.72  E-value=3.2e-09  Score=75.63  Aligned_cols=39  Identities=13%  Similarity=0.082  Sum_probs=37.4

Q ss_pred             ccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           42 IRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        42 ~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      .++++|.|++|       ++.|..+..|.+|+++|+++++|+|++|
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            8 AGVNPYKCSQC-------EKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CCCCSEECSSS-------SCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCeECCCC-------CcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            38999999999       8999999999999999999999999988

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=4.4e-09  Score=75.03  Aligned_cols=41  Identities=29%  Similarity=0.470  Sum_probs=27.5

Q ss_pred             hhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           72 HFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        72 H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      |+++|+++++|.|++|+|.|.+...|++|+++ +++++|.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            56666666777777777777766666666666 566666664

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.9e-09  Score=75.77  Aligned_cols=38  Identities=18%  Similarity=0.223  Sum_probs=37.0

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|.|++|
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            9 GEKPFKCEEC-------GKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEEETTT-------TEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CCCCeeCCCC-------CcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.2e-09  Score=76.56  Aligned_cols=39  Identities=23%  Similarity=0.307  Sum_probs=37.4

Q ss_pred             ccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           42 IRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        42 ~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      .++++|.|++|       ++.|.....|++|+++|+++++|+|++|
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            8 TGEKPYKCMEC-------GKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SSCCSSSBTTT-------TBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCCCcCCCCC-------CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            38999999999       8999999999999999999999999988

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=3.7e-09  Score=75.09  Aligned_cols=42  Identities=24%  Similarity=0.500  Sum_probs=33.7

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +|+++|+++++|.|++|+|.|.....|.+|+++ +++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            577788888888888888888888888888877 677788775

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=3.3e-09  Score=75.43  Aligned_cols=42  Identities=17%  Similarity=0.282  Sum_probs=34.8

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +|+++|+++++|.|++|++.|.....|.+|+++ +++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            577888888888888888888888888888888 678888885

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=5.5e-09  Score=74.40  Aligned_cols=41  Identities=22%  Similarity=0.472  Sum_probs=29.6

Q ss_pred             hhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           72 HFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        72 H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      |+++|+++++|.|++|+|.|..+..|++|+++ +++++|.|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            56677777777777777777777777777777 566777774

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=7.2e-09  Score=73.66  Aligned_cols=39  Identities=23%  Similarity=0.487  Sum_probs=36.9

Q ss_pred             CCCCccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCC
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEP   52 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C   52 (498)
                      +++++|+|++|+|.|..+..|.+|+++|.             ++++|.|++|
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C~~C   46 (46)
T 2ep0_A            8 TGEKPYKCDVCHKSFRYGSSLTVHQRIHT-------------GEKPSGPSSG   46 (46)
T ss_dssp             TTCCSEECSSSCCEESSHHHHHHHHTTTS-------------SSCCCSCCCC
T ss_pred             CCCCCeeCcccCcccCChHHHHHHHHHhC-------------CCCCCCCCCC
Confidence            47899999999999999999999999998             8999999988

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=4.3e-09  Score=73.34  Aligned_cols=40  Identities=23%  Similarity=0.429  Sum_probs=29.2

Q ss_pred             hhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceec
Q 010863           72 HFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRC  111 (498)
Q Consensus        72 H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C  111 (498)
                      |+++|+++++|.|++|++.|.....|++|+++ +++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            56677777777777777777777777777777 56777766

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=2.8e-09  Score=75.92  Aligned_cols=39  Identities=21%  Similarity=0.146  Sum_probs=37.5

Q ss_pred             ccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           42 IRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        42 ~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      .++++|.|++|       ++.|.....|++|+++|+++++|+|++|
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            8 SGEKPYKCVEC-------GKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CSCCSEECSSS-------CCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCeECccc-------CchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            38999999999       9999999999999999999999999998

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=2.5e-09  Score=76.13  Aligned_cols=38  Identities=21%  Similarity=0.237  Sum_probs=37.1

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|++|
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            9 GEKPYGCNEC-------GKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCEEETTT-------TEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCcCeECCCC-------CcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999998

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.70  E-value=8.7e-09  Score=72.98  Aligned_cols=39  Identities=21%  Similarity=0.499  Sum_probs=37.3

Q ss_pred             CCCCccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCC
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEP   52 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C   52 (498)
                      +++++|+|++|+|.|..+..|.+|+++|.             ++++|.|++|
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~-------------~~~~~~C~~c   44 (45)
T 2epq_A            6 SGEKPYSCPVCGLRFKRKDRMSYHVRSHD-------------GSVGKSGPSS   44 (45)
T ss_dssp             SSCCSSEETTTTEECSCHHHHHHHHHHHS-------------CCCCCCCCCC
T ss_pred             CCCCCCcCCCCCcccCCHHHHHHHHHHcc-------------CCCCCCCcCC
Confidence            47899999999999999999999999998             8999999999

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.70  E-value=7.7e-09  Score=74.50  Aligned_cols=39  Identities=28%  Similarity=0.503  Sum_probs=37.0

Q ss_pred             CCCCccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCC
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEP   52 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C   52 (498)
                      .++++|+|++|++.|.....|.+|+++|.             ++++|.|++|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C~~C   46 (48)
T 2epr_A            8 RTRKQVACEICGKIFRDVYHLNRHKLSHS-------------GEKPYSSGPS   46 (48)
T ss_dssp             CCCCSEEETTTTEEESSHHHHHHHGGGSC-------------SCCCCCSCCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHhcC-------------CCCCccCCCC
Confidence            36899999999999999999999999998             8999999999

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=5.8e-09  Score=74.14  Aligned_cols=28  Identities=14%  Similarity=0.044  Sum_probs=13.3

Q ss_pred             CCccCChhhHhhhhhhccCCcccccCcC
Q 010863           60 SRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        60 ~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      ++.|.....|++|+++|+++++|+|++|
T Consensus        19 ~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A           19 HKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4444444444444444444444444443

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=6.4e-09  Score=74.02  Aligned_cols=39  Identities=23%  Similarity=0.339  Sum_probs=36.9

Q ss_pred             CCCCccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCC
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEP   52 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C   52 (498)
                      +++++|+|++|+|.|..+..|.+|+++|.             ++++|.|++|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C~~C   46 (46)
T 2ytt_A            8 EGEKPYQCSECGKSFSGSYRLTQHWITHT-------------REKPSGPSSG   46 (46)
T ss_dssp             SCCCTTCCSSSCCCCSSHHHHHHHHTHHH-------------HCCCCSCCCC
T ss_pred             CCCCCeeCCCCCcccCCHHHHHHHHHHcC-------------CCCCCCCCCC
Confidence            47899999999999999999999999998             8999999988

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=4.3e-09  Score=74.95  Aligned_cols=39  Identities=28%  Similarity=0.303  Sum_probs=37.3

Q ss_pred             ccCcceeCCCCCCCCCCCCCccCChhhHhhhhh-hccCCcccccCcC
Q 010863           42 IRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFC-RKHGEKKWKCDKC   87 (498)
Q Consensus        42 ~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r-~Htgekp~~C~~C   87 (498)
                      .++++|.|++|       ++.|.....|++|++ +|+++++|+|++|
T Consensus         8 ~~~k~~~C~~C-------~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            8 TGKKPYECIEC-------GKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCSBCCSSS-------CCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             CCCCCEECCcc-------CchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            38999999999       999999999999999 9999999999988

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=8.4e-09  Score=72.71  Aligned_cols=42  Identities=14%  Similarity=0.195  Sum_probs=32.8

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      .|+++|+++++|.|++|++.|.....|.+|+++ +++++|.|+
T Consensus         2 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            2 SSGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CCSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            367778888888888888888888888888877 677788774

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=2.8e-09  Score=75.06  Aligned_cols=42  Identities=14%  Similarity=0.260  Sum_probs=34.2

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +|+++|+++++|.|++|++.|.....|.+|+++ +++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            577888888888888888888888888888888 677888773

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.69  E-value=7.1e-09  Score=74.70  Aligned_cols=42  Identities=19%  Similarity=0.297  Sum_probs=35.7

Q ss_pred             cccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCc
Q 010863           41 EIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSK   89 (498)
Q Consensus        41 ~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK   89 (498)
                      +..+++|.|++|       ++.|.....|.+|+++|+++++|.|++|+|
T Consensus         7 ~~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEIC-------GKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTT-------TEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCC-------CcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            347788888888       888888888888888888888888888876

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=7e-09  Score=73.85  Aligned_cols=39  Identities=21%  Similarity=0.377  Sum_probs=20.7

Q ss_pred             hhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           74 CRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        74 r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      ++|+++++|.|++|+|.|.....|.+|+++ +++++|.|+
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS   44 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            445555555555555555555555555555 445555554

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=4.6e-09  Score=74.78  Aligned_cols=39  Identities=21%  Similarity=0.233  Sum_probs=37.0

Q ss_pred             ccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           42 IRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        42 ~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      .++++|.|++|       ++.|.....|++|+++|+++++|+|++|
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            8 SGEKPFKCKEC-------GKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSEECSSS-------CCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCEECCcC-------CchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            38999999999       9999999999999999999999999876

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=7.5e-09  Score=73.06  Aligned_cols=41  Identities=24%  Similarity=0.438  Sum_probs=33.0

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceec
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRC  111 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C  111 (498)
                      .|+++|+++++|.|++|++.|.....|..|+++ +++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            577788888888888888888888888888887 67777776

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.67  E-value=1.3e-09  Score=83.52  Aligned_cols=46  Identities=15%  Similarity=0.294  Sum_probs=42.0

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHHH
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWK   98 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~   98 (498)
                      ++++|.|++|       ++.|.....|.   ++|+++++|+|++|++.|....++.
T Consensus        11 ~~k~~~C~~C-------~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A           11 NRASFKCPVC-------SSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             SSSEEECSSS-------CCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             CCCCccCCCC-------CchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            8999999999       89999988887   7899999999999999999877654

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=6.9e-09  Score=73.86  Aligned_cols=42  Identities=19%  Similarity=0.353  Sum_probs=27.0

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hC-CCceecC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CG-TREYRCD  112 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hg-ekpy~C~  112 (498)
                      .|+++|+++++|.|++|++.|.....|.+|+++ ++ +++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            356666666666666666666666666666666 45 6666663

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=1.9e-08  Score=71.64  Aligned_cols=40  Identities=23%  Similarity=0.469  Sum_probs=24.7

Q ss_pred             hhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC
Q 010863           73 FCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        73 ~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      +++|+++++|+|++|++.|..+..|++|+++ +++++|.|+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            4456666666666666666666666666666 456666664

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.60  E-value=1.5e-08  Score=71.69  Aligned_cols=40  Identities=15%  Similarity=0.165  Sum_probs=26.5

Q ss_pred             ccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCC
Q 010863           42 IRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCS   88 (498)
Q Consensus        42 ~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~Cg   88 (498)
                      .++++|.|++|       ++.|..+..|.+|+++|+++++|.|++||
T Consensus         6 ~~~k~~~C~~C-------~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            6 SGEKPYSCPVC-------GLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             SSCCSSEETTT-------TEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCCCCCcCCCC-------CcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            35666666666       66666666666666666666666666664

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=1.1e-08  Score=72.88  Aligned_cols=37  Identities=19%  Similarity=0.245  Sum_probs=35.5

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCc
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDK   86 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~   86 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|++
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            9 GEKPFQCEEC-------GKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSBCCSSS-------CCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CCcCCCCCCC-------CcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.59  E-value=7.4e-09  Score=76.59  Aligned_cols=52  Identities=13%  Similarity=0.156  Sum_probs=48.5

Q ss_pred             CcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccc
Q 010863           12 NKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWK   83 (498)
Q Consensus        12 gK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~   83 (498)
                      +|.|.....|..|+++|.             ++++|.|++|       ++.|.....|.+|+++|+++++|.
T Consensus         3 ~k~~~~~~~l~~h~~~H~-------------~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQ-------------SEQPATCPIC-------YAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHT-------------SSCCEECTTT-------CCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcC-------------CCCCccCCCC-------CcccCCHHHHHHHHHHhccCCCCC
Confidence            578889999999999998             8999999999       999999999999999999999874

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=1.1e-08  Score=72.79  Aligned_cols=37  Identities=22%  Similarity=0.248  Sum_probs=35.5

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCc
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDK   86 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~   86 (498)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|++
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            9 GQRPYECIEC-------GKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSEECSSS-------CCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCcCcCCCCC-------CCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=1e-08  Score=72.77  Aligned_cols=37  Identities=16%  Similarity=0.217  Sum_probs=35.5

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCc
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDK   86 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~   86 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|.|++
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            9 GEKPYECSDC-------GKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             SCCSSCCSSS-------CCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             CCCCcCCCCC-------CchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=1.3e-08  Score=72.26  Aligned_cols=37  Identities=16%  Similarity=0.250  Sum_probs=35.5

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCc
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDK   86 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~   86 (498)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|+|++
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            9 GENPFICSEC-------GKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             SCCSCBCTTT-------CCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCEECCcc-------CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=1.3e-08  Score=72.29  Aligned_cols=37  Identities=22%  Similarity=0.265  Sum_probs=35.5

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCc
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDK   86 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~   86 (498)
                      ++++|.|++|       ++.|.....|++|+++|+++++|.|++
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            9 GEKPYKCNEC-------GKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCBCSSS-------CCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCcCeECCCC-------CcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.58  E-value=3.1e-08  Score=69.54  Aligned_cols=38  Identities=18%  Similarity=0.355  Sum_probs=35.3

Q ss_pred             CCCCccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCC
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPE   51 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~   51 (498)
                      +++++|+|++|++.|..+..|.+|+++|.             ++++|.|++
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C~~   43 (43)
T 2yrm_A            6 SGNGAFFCNECDCRFSEEASLKRHTLQTH-------------SDKSGPSSG   43 (43)
T ss_dssp             SSSCCBCCSSSCCCBSSHHHHHHHHHHHT-------------CTTCSSSCC
T ss_pred             CCCCCEECCCCCCeeCChHHHHHHHHhhC-------------CCCCccCCC
Confidence            47899999999999999999999999998             889999974

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.58  E-value=1.1e-08  Score=72.78  Aligned_cols=37  Identities=19%  Similarity=0.234  Sum_probs=35.5

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCc
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDK   86 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~   86 (498)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|++
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            9 GEKPFECAEC-------GKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSEECSSS-------SCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCEECCCC-------CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8999999999       899999999999999999999999974

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.58  E-value=1.4e-08  Score=70.64  Aligned_cols=36  Identities=19%  Similarity=0.262  Sum_probs=34.7

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCD   85 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~   85 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|+
T Consensus         7 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            7 GENPYECSEC-------GKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             SCCSEECSSS-------CCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCccCCCc-------ChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            8999999999       99999999999999999999999995

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=1.2e-08  Score=72.51  Aligned_cols=37  Identities=22%  Similarity=0.267  Sum_probs=35.5

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCc
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDK   86 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~   86 (498)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|.|++
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            9 GERHYECSEC-------GKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCEECSSS-------CCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CCCCeECCcC-------CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=6.5e-09  Score=83.14  Aligned_cols=63  Identities=24%  Similarity=0.447  Sum_probs=54.6

Q ss_pred             hhHhhhhhhccCCcccccCcCCccccchhHHHHHHhhhCCCceecC-CCCccCChHHHHHHHHHhh
Q 010863           67 TGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCD-CGTLFSRRDSFITHRAFCD  131 (498)
Q Consensus        67 s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~hgekpy~C~-Cgk~F~~~s~L~~H~~~h~  131 (498)
                      ..|..|+++|.+++++.|.+|++.|. ...|..|+...++++|.|+ |++.|.+ ..|..|+++|.
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~~~c~~~~~~C~~C~~~~~~-~~l~~H~~~c~   66 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHEDYCGARTELCGNCGRNVLV-KDLKTHPEVCG   66 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHHHHHHHCEEECSSSCCEEET-TGGGTHHHHBT
T ss_pred             hHHHhhCcccCCCcccCCcccChHhh-HHHHHHHHhHcCCCceEcccCCCcCcH-HHHHHHHHHcc
Confidence            46789999999999999999999995 8999999933899999999 9999875 78999996553

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=1.5e-08  Score=71.99  Aligned_cols=37  Identities=24%  Similarity=0.318  Sum_probs=35.5

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCc
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDK   86 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~   86 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|.|++
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            9 GGKPYQCNEC-------GKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             SSCSSSCCSS-------CCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CCCCeECCCC-------CcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=1.5e-08  Score=72.21  Aligned_cols=38  Identities=18%  Similarity=0.242  Sum_probs=35.9

Q ss_pred             ccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCc
Q 010863           42 IRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDK   86 (498)
Q Consensus        42 ~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~   86 (498)
                      .++++|.|++|       ++.|.....|++|+++|+++++|.|++
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            8 TGEKPYKCQVC-------GKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             SSCCSCBCSSS-------CCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCcccCCCCC-------CcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            38999999999       999999999999999999999999974

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=1.5e-08  Score=71.92  Aligned_cols=37  Identities=22%  Similarity=0.316  Sum_probs=35.5

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCc
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDK   86 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~   86 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|++
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            9 GEKPYICNEC-------GKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCSEECSSS-------CCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCcCEECCCC-------ChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            8999999999       999999999999999999999999974

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=1.3e-08  Score=72.23  Aligned_cols=37  Identities=24%  Similarity=0.264  Sum_probs=35.5

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCc
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDK   86 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~   86 (498)
                      ++++|.|++|       ++.|.....|++|+++|+++++|.|++
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            9 GEKPYNCEEC-------GKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSEECTTT-------CCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCcCccCCCC-------CCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=1.5e-08  Score=71.97  Aligned_cols=37  Identities=22%  Similarity=0.261  Sum_probs=35.4

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCc
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDK   86 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~   86 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|+.
T Consensus         9 ~~~~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            9 GERHYECSEC-------GKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             SCCCEECSSS-------CCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCCCCCCCC-------CcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=1.3e-08  Score=72.21  Aligned_cols=37  Identities=24%  Similarity=0.317  Sum_probs=35.5

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCc
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDK   86 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~   86 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|++
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            9 GEKPYKCNEC-------GKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCEECTTS-------CCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CCCCeecccc-------CChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=1.4e-08  Score=72.04  Aligned_cols=37  Identities=22%  Similarity=0.280  Sum_probs=35.5

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCc
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDK   86 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~   86 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|++
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            9 GEKPFECSEC-------QKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSEECSSS-------CCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCcCCCCC-------CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=1.4e-08  Score=72.12  Aligned_cols=37  Identities=22%  Similarity=0.277  Sum_probs=35.5

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCc
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDK   86 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~   86 (498)
                      ++++|.|++|       ++.|.....|++|+++|+++++|.|++
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            9 GEKPYKCNEC-------GKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCTTCCSSS-------CCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCcCeECCCC-------CcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=2.8e-08  Score=70.28  Aligned_cols=38  Identities=29%  Similarity=0.462  Sum_probs=35.2

Q ss_pred             CCCCccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCC
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPE   51 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~   51 (498)
                      +++++|+|++|+|.|..+..|.+|+++|.             ++++|.|++
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-------------~~k~~~C~~   45 (45)
T 2epu_A            8 TGQKPFECTHCGKSFRAKGNLVTHQRIHT-------------GEKSGPSSG   45 (45)
T ss_dssp             CSCCSEEETTTTEEESSHHHHHHHHTTTS-------------SCCCCCSCC
T ss_pred             CCCcCccCCCCCCccCChHHHHHHHHHhC-------------CCCCCCCCC
Confidence            47899999999999999999999999998             889999974

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=1.6e-08  Score=71.81  Aligned_cols=37  Identities=24%  Similarity=0.318  Sum_probs=35.4

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCc
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDK   86 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~   86 (498)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|+.
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            9 GEKPYKCNEC-------GKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCTTT-------TCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CCCCeECCcC-------ChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=1.7e-08  Score=71.77  Aligned_cols=37  Identities=19%  Similarity=0.267  Sum_probs=35.5

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCc
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDK   86 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~   86 (498)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|++
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            9 GEKCYKCDVC-------GKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCBCSSS-------CCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCCCeECCCC-------CcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=4.2e-08  Score=69.82  Aligned_cols=38  Identities=26%  Similarity=0.304  Sum_probs=35.3

Q ss_pred             CCCCccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCC
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPE   51 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~   51 (498)
                      +++++|+|++|+|.|..+..|.+|+++|.             ++++|.|++
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-------------~~k~~~C~~   45 (46)
T 2eom_A            8 HGERGHRCSDCGKFFLQASNFIQHRRIHT-------------GEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCSSSCCCCSSHHHHHHHHHHHS-------------SCCCSSCCC
T ss_pred             CCCCCcCCCCCCCeeCChHHHHHHHHHhC-------------CCCCCCCCC
Confidence            47899999999999999999999999998             889999974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=1.6e-08  Score=71.69  Aligned_cols=37  Identities=24%  Similarity=0.317  Sum_probs=35.5

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCc
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDK   86 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~   86 (498)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|++
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            9 GEKPYRCGEC-------GKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCEECSSS-------CCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCCCeECCCC-------CCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=1.5e-08  Score=71.94  Aligned_cols=38  Identities=24%  Similarity=0.260  Sum_probs=35.9

Q ss_pred             ccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCc
Q 010863           42 IRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDK   86 (498)
Q Consensus        42 ~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~   86 (498)
                      .++++|.|++|       ++.|.....|.+|+++|+++++|+|++
T Consensus         8 ~~~~~~~C~~C-------~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            8 TGEKPYECKVC-------SKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCSEECSSS-------CCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCcCeECCCC-------CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            38999999999       999999999999999999999999974

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=1.8e-08  Score=69.94  Aligned_cols=36  Identities=17%  Similarity=0.182  Sum_probs=34.6

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCD   85 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~   85 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|.
T Consensus         7 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            7 GEKPYSCAEC-------KETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             SCCSCBCTTT-------CCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCCCeECCCC-------CCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            8999999999       99999999999999999999999984

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=2.5e-08  Score=71.19  Aligned_cols=39  Identities=21%  Similarity=0.495  Sum_probs=17.6

Q ss_pred             hhccCCcccccC--cCCccccchhHHHHHHhh-hCCCceecC
Q 010863           74 CRKHGEKKWKCD--KCSKRYAVQSDWKAHSKT-CGTREYRCD  112 (498)
Q Consensus        74 r~Htgekp~~C~--~CgK~F~~~s~L~~H~r~-hgekpy~C~  112 (498)
                      ++|+++++|+|.  +|++.|..+..|.+|+++ +++++|.|+
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   46 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS   46 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344444444444  444444444444444444 344444444

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=1.9e-08  Score=71.54  Aligned_cols=38  Identities=21%  Similarity=0.283  Sum_probs=35.9

Q ss_pred             ccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCc
Q 010863           42 IRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDK   86 (498)
Q Consensus        42 ~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~   86 (498)
                      .++++|.|++|       ++.|.....|.+|+++|+++++|.|++
T Consensus         8 ~~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            8 AGKKLFKCNEC-------KKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSCCCBCTTT-------CCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCEECCcc-------CcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            38999999999       999999999999999999999999974

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=1.8e-08  Score=71.69  Aligned_cols=38  Identities=21%  Similarity=0.273  Sum_probs=35.7

Q ss_pred             ccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCc
Q 010863           42 IRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDK   86 (498)
Q Consensus        42 ~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~   86 (498)
                      .++++|.|++|       ++.|.....|.+|+++|+++++|+|+.
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            8 SGKKPYECKEC-------RKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCSCSCCCSSS-------CCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCCcCCCCc-------CchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            38999999999       999999999999999999999999963

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=2.1e-08  Score=70.91  Aligned_cols=38  Identities=18%  Similarity=0.531  Sum_probs=19.7

Q ss_pred             hhccCCcccccCcCCccccchhHHHHHHhh-hCCCceec
Q 010863           74 CRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRC  111 (498)
Q Consensus        74 r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C  111 (498)
                      ++|+++++|+|++|+|.|.....|++|+++ +++++|.|
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS   43 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCS
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCC
Confidence            345555555555555555555555555555 34455554

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=1.3e-08  Score=72.40  Aligned_cols=37  Identities=22%  Similarity=0.364  Sum_probs=35.3

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCc
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDK   86 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~   86 (498)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|+.
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            9 GEKPYKCSDC-------GKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             SCCCEECSSS-------CCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             CCCCEECccc-------CCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            8999999999       999999999999999999999999973

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=2.1e-08  Score=70.33  Aligned_cols=36  Identities=25%  Similarity=0.265  Sum_probs=34.7

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCD   85 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~   85 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|+
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            9 GMKPYVCNEC-------GKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SSSSSCCTTT-------CCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCcCeECCCC-------CCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            8999999999       99999999999999999999999995

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=2.3e-08  Score=69.34  Aligned_cols=35  Identities=17%  Similarity=0.238  Sum_probs=34.1

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCccccc
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKC   84 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C   84 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|.|
T Consensus         8 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            8 GEKPYRCDQC-------GKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             SCCSBCCTTT-------TCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCCCeeCCCc-------cchhCCHHHHHHHHHHhCCCCCCCC
Confidence            8999999999       8999999999999999999999998

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=1.1e-08  Score=72.77  Aligned_cols=37  Identities=16%  Similarity=0.130  Sum_probs=35.4

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCc
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDK   86 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~   86 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|+.
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            9 GEKPYSCNVC-------GKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             SCCSEEETTT-------TEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CCCCeECccc-------ChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.52  E-value=5.2e-08  Score=68.38  Aligned_cols=37  Identities=16%  Similarity=0.417  Sum_probs=17.6

Q ss_pred             hccCCcccccCcCCccccchhHHHHHHhh-hCCCceec
Q 010863           75 RKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRC  111 (498)
Q Consensus        75 ~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C  111 (498)
                      +|+++++|.|++|++.|..+..|.+|+++ +++++|.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPS   41 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSS
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccC
Confidence            34444444444444444444444444444 34444444

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=2.4e-08  Score=69.95  Aligned_cols=36  Identities=22%  Similarity=0.294  Sum_probs=34.7

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCD   85 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~   85 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|+
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            9 GEKPYECNEC-------QKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCCSEECTTT-------CCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCCCeECCCC-------CcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            8999999999       99999999999999999999999995

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=3.9e-08  Score=68.01  Aligned_cols=37  Identities=16%  Similarity=0.505  Sum_probs=18.5

Q ss_pred             hccCCcccccCcCCccccchhHHHHHHhh-hCCCceec
Q 010863           75 RKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRC  111 (498)
Q Consensus        75 ~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C  111 (498)
                      +|+++++|.|++|++.|.....|..|+++ +++++|.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            34445555555555555555555555544 34455444

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=2.6e-08  Score=70.84  Aligned_cols=39  Identities=21%  Similarity=0.246  Sum_probs=36.1

Q ss_pred             cccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCc
Q 010863           41 EIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDK   86 (498)
Q Consensus        41 ~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~   86 (498)
                      |.++++|.|++|       ++.|..+..|++|+++|+++++|+|+.
T Consensus         7 h~~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            7 GTGEKPYECDVC-------RKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSCBCTTT-------CCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             cCCCCCcCCCCc-------CchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            348999999999       999999999999999999999999964

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=2.3e-08  Score=71.13  Aligned_cols=38  Identities=11%  Similarity=0.103  Sum_probs=35.8

Q ss_pred             ccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccC-CcccccCc
Q 010863           42 IRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHG-EKKWKCDK   86 (498)
Q Consensus        42 ~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htg-ekp~~C~~   86 (498)
                      .++++|.|++|       ++.|.....|++|+++|++ +++|+|++
T Consensus         8 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            8 QKEKCFKCNKC-------EKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCSCCEECSSS-------CCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCCCCEECcCC-------CCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            38999999999       9999999999999999999 99999974

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=3e-08  Score=69.67  Aligned_cols=36  Identities=11%  Similarity=0.123  Sum_probs=34.7

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCD   85 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~   85 (498)
                      ++++|.|++|       ++.|.....|..|+++|+++++|+|+
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            9 TRKRYECSKC-------QATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCSSEECTTT-------CCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CCCCeECCCC-------CCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            8999999999       99999999999999999999999995

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=1.7e-08  Score=71.04  Aligned_cols=36  Identities=8%  Similarity=0.100  Sum_probs=34.7

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCD   85 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~   85 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|.
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            9 GENPFKCSKC-------DRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCCSEECSSS-------SCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCCCeECCCC-------CchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            8999999999       89999999999999999999999984

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=1.9e-08  Score=70.67  Aligned_cols=36  Identities=14%  Similarity=0.194  Sum_probs=34.7

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCD   85 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~   85 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|+
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            9 GENPYECCEC-------GKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCCSCEETTT-------TEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCcCeeCCCC-------CCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            8999999999       89999999999999999999999995

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=2.7e-08  Score=69.25  Aligned_cols=36  Identities=19%  Similarity=0.205  Sum_probs=34.4

Q ss_pred             ccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCccccc
Q 010863           42 IRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKC   84 (498)
Q Consensus        42 ~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C   84 (498)
                      .++++|.|++|       ++.|.....|++|+++|+++++|+|
T Consensus         7 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            7 GGEKPYPCEIC-------GTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             SSSCCBCCSSS-------CCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCCCCEECCCC-------CCccCCHHHHHHHHHhcCCCCCCCC
Confidence            38999999999       9999999999999999999999998

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=1.9e-08  Score=71.48  Aligned_cols=37  Identities=16%  Similarity=0.269  Sum_probs=35.4

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCc
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDK   86 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~   86 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|.|+.
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            9 GERPFKCNEC-------GKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCCCSSS-------CCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCCeECCCC-------CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8999999999       999999999999999999999999973

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.50  E-value=2e-08  Score=82.99  Aligned_cols=50  Identities=12%  Similarity=0.233  Sum_probs=36.1

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhh
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|..|.+    ...|..|.++
T Consensus        22 ~~kpy~C~~C-------~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~----~~~~~~~~~~   71 (88)
T 1x6f_A           22 QNSTYQCKHC-------DSKLQSTAELTSHLNIHNEEFQKRAKRQER----RKQLLSKQKY   71 (88)
T ss_dssp             CCSCEECSSS-------CCEESSHHHHHHHHHHHHHHHHHHCCCCSC----CCCCCCCCCC
T ss_pred             CCCCCcCCCC-------CCEeCCHHHHHHHHHHhCCCCCcccchhhh----HHHHHhhhcc
Confidence            6778888887       788888888888888888888888766543    4445555555

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=5.5e-08  Score=67.25  Aligned_cols=36  Identities=25%  Similarity=0.458  Sum_probs=33.7

Q ss_pred             CCCCccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeC
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVC   49 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C   49 (498)
                      +++++|+|++|++.|.....|..|+++|.             ++++|.|
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C   41 (41)
T 2ept_A            6 SGQRVYECQECGKSFRQKGSLTLHERIHT-------------GSGPSSG   41 (41)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHGGGCC-------------CCSCSCC
T ss_pred             CCCCCeECCCCCCCcCCHHHHHHHHHHhC-------------CCCCcCC
Confidence            47899999999999999999999999998             8889987

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.48  E-value=2.6e-08  Score=69.17  Aligned_cols=36  Identities=14%  Similarity=0.171  Sum_probs=34.4

Q ss_pred             ccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCccccc
Q 010863           42 IRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKC   84 (498)
Q Consensus        42 ~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C   84 (498)
                      .++++|.|++|       ++.|.....|.+|+++|+++++|.|
T Consensus         7 ~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            7 GGEKPYKCETC-------GARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CSSCSEECTTT-------CCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCCCCEeCCCc-------ChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            38999999999       9999999999999999999999998

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.48  E-value=8.9e-09  Score=85.13  Aligned_cols=53  Identities=8%  Similarity=0.195  Sum_probs=43.8

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-CCCccCChHHHHHHH
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTLFSRRDSFITHR  127 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-Cgk~F~~~s~L~~H~  127 (498)
                      .|.++|+++++|.|++|++.|.....|..|+++ +++++|.|. |.+..    .|..|.
T Consensus        15 ~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~~~----~~~~~~   69 (88)
T 1x6f_A           15 LGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQERRK----QLLSKQ   69 (88)
T ss_dssp             CCCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSCCC----CCCCCC
T ss_pred             ccccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhhHH----HHHhhh
Confidence            345679999999999999999999999999999 789999998 76433    344555

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.48  E-value=3.2e-08  Score=68.60  Aligned_cols=36  Identities=8%  Similarity=0.060  Sum_probs=34.5

Q ss_pred             ccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCccccc
Q 010863           42 IRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKC   84 (498)
Q Consensus        42 ~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C   84 (498)
                      .++++|.|++|       ++.|..+..|++|+++|+++++|+|
T Consensus         7 ~~~~~~~C~~C-------~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            7 GGETPYLCGQC-------GKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CSSCCEECSSS-------CCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCCCCeECCCC-------CcccCCHHHHHHHhhhcCCCCCCCC
Confidence            38999999999       9999999999999999999999998

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.47  E-value=3.9e-08  Score=70.17  Aligned_cols=40  Identities=13%  Similarity=0.130  Sum_probs=37.4

Q ss_pred             cccCcceeCC--CCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcC
Q 010863           41 EIRKKVYVCP--EPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC   87 (498)
Q Consensus        41 ~~~~k~y~C~--~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~C   87 (498)
                      |.++++|.|.  +|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         7 H~~~k~~~C~~~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            7 GTGEKPFACTWPGC-------GWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             SCCCCCEECCSSSC-------CCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             cCCCCCeECCCCCC-------CCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3489999998  78       9999999999999999999999999988

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=3.8e-08  Score=69.27  Aligned_cols=37  Identities=16%  Similarity=0.151  Sum_probs=35.1

Q ss_pred             ccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccC
Q 010863           42 IRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCD   85 (498)
Q Consensus        42 ~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~   85 (498)
                      .++++|.|++|       ++.|.....|.+|+++|+++++|+|+
T Consensus         8 ~~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            8 AAKTTSECQEC-------GKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             SSSCCCCCTTT-------CCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCcCeECCCC-------CcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            38999999999       99999999999999999999999995

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.46  E-value=2.9e-08  Score=70.36  Aligned_cols=37  Identities=19%  Similarity=0.269  Sum_probs=35.3

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCc
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDK   86 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~   86 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|+.
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            9 GEKPYECNQC-------GKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCSSEETTT-------TEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CCCCeECCCC-------ChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8999999999       899999999999999999999999963

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.44  E-value=2.7e-08  Score=70.62  Aligned_cols=36  Identities=14%  Similarity=0.105  Sum_probs=34.9

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCD   85 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~   85 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|+
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            9 GEKPFQCKEC-------GMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCSEECSSS-------CCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             CCCCeeCccc-------ChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            8999999999       99999999999999999999999996

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.41  E-value=6.6e-08  Score=68.09  Aligned_cols=36  Identities=19%  Similarity=0.085  Sum_probs=34.4

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCD   85 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~   85 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|.|.
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            9 GEKPYECNEC-------GKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCSEECSSS-------CCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCcCeECCCC-------CcccCchHHHHHHHhHhcCCCCCCCC
Confidence            8999999999       99999999999999999999999873

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.40  E-value=1.6e-07  Score=64.28  Aligned_cols=37  Identities=22%  Similarity=0.466  Sum_probs=33.6

Q ss_pred             CCCCccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCC
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCP   50 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~   50 (498)
                      +++++|+|++|++.|.....|..|+++|.             ++++|.|.
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~~~   38 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNVHR-------------RDRARLRL   38 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHTTC-------------CSCTTTTC
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHHcC-------------CCccceec
Confidence            57899999999999999999999999998             78888763

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.39  E-value=4.1e-08  Score=68.97  Aligned_cols=37  Identities=16%  Similarity=0.200  Sum_probs=34.9

Q ss_pred             ccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccC
Q 010863           42 IRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCD   85 (498)
Q Consensus        42 ~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~   85 (498)
                      .++++|.|++|       ++.|.....|.+|+++|+++++|.|.
T Consensus         8 ~~~~~~~C~~C-------~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            8 TDSKSYNCNEC-------GKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCEEETTT-------TEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCCCeECccc-------CcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            38999999999       89999999999999999999999984

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=2e-08  Score=80.31  Aligned_cols=52  Identities=23%  Similarity=0.472  Sum_probs=48.0

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhhh
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTC  104 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~h  104 (498)
                      +++++.|++|       ++.|. ...|..|+ .|.++++|.|+.|++.|. +..|..|++++
T Consensus        14 ~~r~~~C~~C-------~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c   65 (75)
T 2d9k_A           14 PLRLAVCQHC-------DLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVC   65 (75)
T ss_dssp             CCCCEECSSS-------CCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHB
T ss_pred             CCcccCCccc-------ChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHc
Confidence            8999999999       89994 99999999 999999999999999987 58999999983

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.31  E-value=3.8e-07  Score=72.25  Aligned_cols=39  Identities=26%  Similarity=0.319  Sum_probs=34.8

Q ss_pred             CCCCccccCc--cCcccCChHHHHHHH-HhcCCCccccccccccccCcceeCCCC
Q 010863            1 MATNRFVCEI--CNKGFQRDQNLQLHR-RGHNLPWKLKQRTSKEIRKKVYVCPEP   52 (498)
Q Consensus         1 ~gekpy~C~~--CgK~F~~~s~L~~H~-r~H~~p~~c~~~~~~~~~~k~y~C~~C   52 (498)
                      +++|||+|.+  |+|.|....+|.+|+ ++|+             ++|||.|.+-
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHT-------------gEKP~~~~~~   64 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHK-------------SDLPAFSAEV   64 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSS-------------SCCCCCCCSC
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCC-------------CCCCcccccc
Confidence            5899999976  999999999999997 6898             8899988764

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.28  E-value=4.4e-07  Score=60.94  Aligned_cols=32  Identities=19%  Similarity=0.453  Sum_probs=26.9

Q ss_pred             hhhhccCCcccccCcCCccccchhHHHHHHhh
Q 010863           72 HFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        72 H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      |+++|+++++|+|++|++.|.....|.+|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~   33 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR   33 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGG
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHH
Confidence            67788888888888888888888888888877

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.22  E-value=4.8e-07  Score=60.73  Aligned_cols=34  Identities=21%  Similarity=0.368  Sum_probs=22.9

Q ss_pred             hhccCCcccccCcCCccccchhHHHHHHhh-hCCC
Q 010863           74 CRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTR  107 (498)
Q Consensus        74 r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgek  107 (498)
                      ++|+++++|.|++|++.|.....|..|+++ ++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            456667777777777777777777777666 4544

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.20  E-value=8.2e-07  Score=58.64  Aligned_cols=26  Identities=35%  Similarity=0.651  Sum_probs=25.2

Q ss_pred             CccccCccCcccCChHHHHHHHHhcC
Q 010863            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         4 kpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      |||+|++|++.|.....|..|+++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~   26 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHE   26 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhC
Confidence            68999999999999999999999998

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.18  E-value=1.1e-06  Score=57.95  Aligned_cols=29  Identities=28%  Similarity=0.555  Sum_probs=27.7

Q ss_pred             CCCCccccCccCcccCChHHHHHHHHhcC
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      +++++|+|++|++.|.....|.+|+++|+
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~   31 (35)
T 2elx_A            3 SGSSGYVCALCLKKFVSSIRLRSHIREVH   31 (35)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             CCCCCeECCCCcchhCCHHHHHHHHHHHc
Confidence            47899999999999999999999999997

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.14  E-value=1.3e-06  Score=57.73  Aligned_cols=29  Identities=31%  Similarity=0.583  Sum_probs=27.7

Q ss_pred             CCCCccccCccCcccCChHHHHHHHHhcC
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      +++++|+|++|++.|..+..|.+|+++|.
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   31 (35)
T 1srk_A            3 SGKRPFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             SCCSCEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHHcC
Confidence            47899999999999999999999999997

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.13  E-value=1.2e-06  Score=59.68  Aligned_cols=35  Identities=11%  Similarity=0.213  Sum_probs=25.6

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCccccc
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKC   84 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C   84 (498)
                      ++++|.|++|       ++.|.....|..|+++|+++++|.|
T Consensus         3 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            3 PPRSYTCSFC-------KREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             CSSSEECTTT-------CCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCceECCCC-------CcccCCHHHHHHHHHHcCCCcccee
Confidence            5677777777       6777777777777777777777765

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.13  E-value=1.3e-06  Score=58.57  Aligned_cols=29  Identities=21%  Similarity=0.615  Sum_probs=27.7

Q ss_pred             CCCCccccCccCcccCChHHHHHHHHhcC
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      +++++|+|++|++.|..+..|.+|+++|+
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~h~   33 (37)
T 2elo_A            5 SSGRSYSCPVCEKSFSEDRLIKSHIKTNH   33 (37)
T ss_dssp             CCCCCCEETTTTEECSSHHHHHHHHHHHC
T ss_pred             CCCCCcCCCCCCCccCCHHHHHHHHHHHc
Confidence            47899999999999999999999999998

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.11  E-value=1.4e-06  Score=57.35  Aligned_cols=28  Identities=18%  Similarity=0.533  Sum_probs=14.4

Q ss_pred             ccCCcccccCcCCccccchhHHHHHHhh
Q 010863           76 KHGEKKWKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        76 Htgekp~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      |+++++|.|.+|++.|.....|.+|+++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~   29 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIRE   29 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHH
Confidence            3445555555555555555555555544

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.08  E-value=1.8e-06  Score=57.02  Aligned_cols=28  Identities=18%  Similarity=0.540  Sum_probs=13.1

Q ss_pred             ccCCcccccCcCCccccchhHHHHHHhh
Q 010863           76 KHGEKKWKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        76 Htgekp~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      |+++++|.|.+|++.|.....|.+|+++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~   29 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKV   29 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGG
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHH
Confidence            3444444444444444444444444444

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.05  E-value=1.4e-06  Score=60.08  Aligned_cols=25  Identities=28%  Similarity=0.679  Sum_probs=24.0

Q ss_pred             CCCCccccCccCcccCChHHHHHHH
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHR   25 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~   25 (498)
                      ++||||+|++|+|.|..+++|.+|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            4899999999999999999999998

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.05  E-value=2.4e-06  Score=59.42  Aligned_cols=29  Identities=21%  Similarity=0.328  Sum_probs=27.4

Q ss_pred             CCCCccccCc--cCcccCChHHHHHHHHhcC
Q 010863            1 MATNRFVCEI--CNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         1 ~gekpy~C~~--CgK~F~~~s~L~~H~r~H~   29 (498)
                      +++|||+|++  |+|.|..+..|++|+++|+
T Consensus         5 ~gekp~~C~~~~C~k~F~~~~~L~~H~r~Ht   35 (38)
T 2eln_A            5 SSGILLKCPTDGCDYSTPDKYKLQAHLKVHT   35 (38)
T ss_dssp             SCCCCEECSSSSCCCEESCHHHHHHHHHHHS
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            4799999986  9999999999999999997

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.02  E-value=2.8e-06  Score=52.79  Aligned_cols=27  Identities=22%  Similarity=0.491  Sum_probs=25.4

Q ss_pred             CCccccCccCcccCChHHHHHHHHhcC
Q 010863            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         3 ekpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      ++||+|++|++.|.....|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            689999999999999999999999884

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.02  E-value=3.5e-06  Score=56.08  Aligned_cols=29  Identities=24%  Similarity=0.547  Sum_probs=27.5

Q ss_pred             CCCCccccCccCcccCChHHHHHHHHhcC
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      +++++|+|++|++.|.....|.+|+++|.
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elq_A            5 SSGKPFKCSLCEYATRSKSNLKAHMNRHS   33 (36)
T ss_dssp             CCCCSEECSSSSCEESCHHHHHHHHHHSS
T ss_pred             CCCCCccCCCCCchhCCHHHHHHHHHHhc
Confidence            47899999999999999999999999997

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.02  E-value=3.1e-06  Score=56.14  Aligned_cols=29  Identities=24%  Similarity=0.471  Sum_probs=27.5

Q ss_pred             CCCCccccCccCcccCChHHHHHHHHhcC
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      +++++|+|.+|++.|.....|.+|+++|.
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elt_A            5 SSGKPYKCPQCSYASAIKANLNVHLRKHT   33 (36)
T ss_dssp             CCCCSEECSSSSCEESSHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCcccCCHHHHHHHHHHcc
Confidence            47899999999999999999999999997

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.00  E-value=3.9e-06  Score=55.65  Aligned_cols=29  Identities=24%  Similarity=0.597  Sum_probs=27.5

Q ss_pred             CCCCccccCccCcccCChHHHHHHHHhcC
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      +++++|+|++|++.|..+..|.+|+++|.
T Consensus         5 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elr_A            5 SSGKTHLCDMCGKKFKSKGTLKSHKLLHT   33 (36)
T ss_dssp             CCCSSCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             CCCCCeecCcCCCCcCchHHHHHHHHHhc
Confidence            47899999999999999999999999997

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.00  E-value=3.1e-06  Score=56.33  Aligned_cols=29  Identities=21%  Similarity=0.453  Sum_probs=27.4

Q ss_pred             CCCCccccCccCcccCChHHHHHHHHhcC
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      +++++|+|++|++.|.....|.+|+++|.
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elv_A            5 SSGLLYDCHICERKFKNELDRDRHMLVHG   33 (36)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHHTTTS
T ss_pred             CCCCCeECCCCCCccCCHHHHHHHHHHhc
Confidence            47899999999999999999999999997

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.99  E-value=2.4e-06  Score=53.45  Aligned_cols=27  Identities=30%  Similarity=0.699  Sum_probs=25.3

Q ss_pred             CCccccCccCcccCChHHHHHHHHhcC
Q 010863            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         3 ekpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      ++||+|++|++.|.....|.+|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            689999999999999999999999884

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.97  E-value=3.1e-06  Score=57.07  Aligned_cols=30  Identities=13%  Similarity=0.284  Sum_probs=21.1

Q ss_pred             hhccCCcccccCcCCccccchhHHHHH-Hhh
Q 010863           74 CRKHGEKKWKCDKCSKRYAVQSDWKAH-SKT  103 (498)
Q Consensus        74 r~Htgekp~~C~~CgK~F~~~s~L~~H-~r~  103 (498)
                      ++|++++||+|++|++.|..+..|..| +++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~   32 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQK   32 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHH
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHH
Confidence            456677777777777777777777777 555

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.97  E-value=3.1e-06  Score=57.05  Aligned_cols=29  Identities=24%  Similarity=0.680  Sum_probs=27.3

Q ss_pred             CCCCccccC--ccCcccCChHHHHHHHHhcC
Q 010863            1 MATNRFVCE--ICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         1 ~gekpy~C~--~CgK~F~~~s~L~~H~r~H~   29 (498)
                      +++++|+|.  .|++.|.....|.+|+++|.
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~   32 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHHhC
Confidence            579999999  59999999999999999998

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.96  E-value=4.3e-06  Score=55.66  Aligned_cols=29  Identities=41%  Similarity=0.661  Sum_probs=27.3

Q ss_pred             CCCCccccCccCcccCChHHHHHHHHhcC
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      +++++|+|++|++.|.....|.+|+++|.
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2els_A            5 SSGKIFTCEYCNKVFKFKHSLQAHLRIHT   33 (36)
T ss_dssp             SCCCCEECTTTCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCEECCCCCceeCCHHHHHHHHHHhC
Confidence            46899999999999999999999999997

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.93  E-value=4.6e-06  Score=55.88  Aligned_cols=29  Identities=21%  Similarity=0.346  Sum_probs=18.9

Q ss_pred             hccCCcccccCcCCccccch-hHHHHHHhh
Q 010863           75 RKHGEKKWKCDKCSKRYAVQ-SDWKAHSKT  103 (498)
Q Consensus        75 ~Htgekp~~C~~CgK~F~~~-s~L~~H~r~  103 (498)
                      +|+++++|+|++|++.|... ..|.+|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~   32 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWA   32 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHH
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHh
Confidence            45666666666666666666 666666665

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=97.92  E-value=4.7e-06  Score=54.88  Aligned_cols=31  Identities=16%  Similarity=0.249  Sum_probs=18.7

Q ss_pred             ceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccc
Q 010863           46 VYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWK   83 (498)
Q Consensus        46 ~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~   83 (498)
                      +|.|++|       ++.|.....|..|+++|+++++|.
T Consensus         2 p~~C~~C-------~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            2 KFACPEC-------PKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCSSS-------CCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             cccCCCC-------CchhCCHHHHHHHHHHhCCCCCCC
Confidence            4566666       566666666666666666666553

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.92  E-value=4.5e-06  Score=55.90  Aligned_cols=29  Identities=24%  Similarity=0.485  Sum_probs=27.3

Q ss_pred             CCCCccccCccCcccCCh-HHHHHHHHhcC
Q 010863            1 MATNRFVCEICNKGFQRD-QNLQLHRRGHN   29 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~-s~L~~H~r~H~   29 (498)
                      +++++|+|++|++.|..+ ..|.+|+++|.
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~   34 (37)
T 2elp_A            5 SSGRAMKCPYCDFYFMKNGSDLQRHIWAHE   34 (37)
T ss_dssp             CCCCCEECSSSSCEECSSCHHHHHHHHHHH
T ss_pred             CCCCCeECCCCChhhccCHHHHHHHHHhcC
Confidence            478999999999999999 99999999997

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.91  E-value=6e-06  Score=65.42  Aligned_cols=36  Identities=11%  Similarity=0.079  Sum_probs=19.2

Q ss_pred             cCcceeCCC--CCCCCCCCCCccCChhhHhhhh-hhccCCcccccC
Q 010863           43 RKKVYVCPE--PNCVHHDPSRALGDLTGIKKHF-CRKHGEKKWKCD   85 (498)
Q Consensus        43 ~~k~y~C~~--C~C~~~~~~k~F~~~s~Lk~H~-r~Htgekp~~C~   85 (498)
                      ++|||+|.+  |       +|+|.....|.+|+ ++|+++|||.|.
T Consensus        24 GEKPYkC~~~~C-------gKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           24 PYRPYRCVHQGC-------FAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SSCSCBCCSTTC-------CCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             CCCCeECCCCCc-------ChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            455555543  4       55555555555554 345555555553

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=97.90  E-value=3.6e-06  Score=56.29  Aligned_cols=30  Identities=20%  Similarity=0.263  Sum_probs=28.4

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGE   79 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htge   79 (498)
                      ++++|.|++|       ++.|.....|.+|+++|+++
T Consensus         8 ~~k~~~C~~C-------~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            8 GIKPFQCPDC-------DRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSSBCCTTT-------CCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCCccCCCC-------CcccCcHHHHHHHHHHhccC
Confidence            8999999999       99999999999999999874

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.90  E-value=5.2e-06  Score=51.82  Aligned_cols=27  Identities=26%  Similarity=0.673  Sum_probs=25.6

Q ss_pred             CCccccCccCcccCChHHHHHHHHhcC
Q 010863            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         3 ekpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      +++|+|++|+|.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcC
Confidence            689999999999999999999999985

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.89  E-value=6.9e-06  Score=51.59  Aligned_cols=27  Identities=19%  Similarity=0.550  Sum_probs=25.8

Q ss_pred             CCccccCccCcccCChHHHHHHHHhcC
Q 010863            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         3 ekpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      +++|+|.+|++.|.....|..|+++|.
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~   27 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHD   27 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhc
Confidence            689999999999999999999999997

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.89  E-value=5.6e-06  Score=55.77  Aligned_cols=23  Identities=9%  Similarity=0.105  Sum_probs=10.6

Q ss_pred             CCccCChhhHhhhhhhccCCccc
Q 010863           60 SRALGDLTGIKKHFCRKHGEKKW   82 (498)
Q Consensus        60 ~k~F~~~s~Lk~H~r~Htgekp~   82 (498)
                      ++.|.....|++|+++|+++++|
T Consensus        15 ~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A           15 GQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CcccCCHHHHHHHHHHhCCCCCC
Confidence            44444444444444444444443

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.89  E-value=6.3e-06  Score=54.81  Aligned_cols=28  Identities=29%  Similarity=0.466  Sum_probs=15.1

Q ss_pred             ccCCcccccCcCCccccchhHHHHHHhh
Q 010863           76 KHGEKKWKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        76 Htgekp~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      |+++++|+|.+|++.|.....|..|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNR   31 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHH
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHH
Confidence            4455555555555555555555555554

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.89  E-value=6.8e-06  Score=54.46  Aligned_cols=28  Identities=25%  Similarity=0.558  Sum_probs=15.5

Q ss_pred             ccCCcccccCcCCccccchhHHHHHHhh
Q 010863           76 KHGEKKWKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        76 Htgekp~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      |.++++|+|.+|++.|.....|..|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRK   31 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHH
Confidence            4455555555555555555555555555

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.87  E-value=5.9e-06  Score=54.95  Aligned_cols=28  Identities=14%  Similarity=0.397  Sum_probs=13.1

Q ss_pred             ccCCcccccCcCCccccchhHHHHHHhh
Q 010863           76 KHGEKKWKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        76 Htgekp~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      |+++++|+|.+|++.|.....|.+|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLV   31 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTT
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHH
Confidence            3444444444444444444444444444

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.85  E-value=7.2e-06  Score=58.99  Aligned_cols=29  Identities=24%  Similarity=0.596  Sum_probs=27.6

Q ss_pred             CCCCccccCccCcccCChHHHHHHHH-hcC
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRR-GHN   29 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r-~H~   29 (498)
                      +++|+|+|.+|+|.|..+..|.+|++ +|.
T Consensus         3 t~~kp~~C~~C~k~F~~~~~L~~H~~~~H~   32 (48)
T 3iuf_A            3 DRDKPYACDICGKRYKNRPGLSYHYAHSHL   32 (48)
T ss_dssp             TTTSCEECTTTCCEESSHHHHHHHHHHSSC
T ss_pred             CCCcCEECCCcCcccCCHHHHHHHhhhhcC
Confidence            57999999999999999999999999 887

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.84  E-value=4.6e-06  Score=57.37  Aligned_cols=25  Identities=20%  Similarity=0.446  Sum_probs=12.5

Q ss_pred             cCCcccccCcCCccccchhHHHHHH
Q 010863           77 HGEKKWKCDKCSKRYAVQSDWKAHS  101 (498)
Q Consensus        77 tgekp~~C~~CgK~F~~~s~L~~H~  101 (498)
                      .+||||+|++|+|.|..+++|++|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            3445555555555555555555554

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.84  E-value=1e-05  Score=53.57  Aligned_cols=28  Identities=25%  Similarity=0.515  Sum_probs=14.7

Q ss_pred             ccCCcccccCcCCccccchhHHHHHHhh
Q 010863           76 KHGEKKWKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        76 Htgekp~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      |.++++|.|++|++.|.....|.+|+++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLL   31 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHH
Confidence            4445555555555555555555555554

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.84  E-value=8.4e-07  Score=58.06  Aligned_cols=26  Identities=31%  Similarity=0.556  Sum_probs=25.1

Q ss_pred             CccccCccCcccCChHHHHHHHHhcC
Q 010863            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         4 kpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      |||+|++|+|.|.....|.+|+++|.
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~   26 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAF   26 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHc
Confidence            68999999999999999999999998

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.82  E-value=8.2e-06  Score=54.96  Aligned_cols=29  Identities=17%  Similarity=0.359  Sum_probs=27.2

Q ss_pred             CCCCccccCccCcccCChHHHHHH-HHhcC
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLH-RRGHN   29 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H-~r~H~   29 (498)
                      +++|||+|++|++.|..+..|..| +++|.
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~   34 (37)
T 2elm_A            5 SSGHLYYCSQCHYSSITKNCLKRHVIQKHS   34 (37)
T ss_dssp             SSSCEEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred             CCCcCeECCCCCcccCCHHHHHHHHHHHcc
Confidence            478999999999999999999999 88886

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.82  E-value=1.2e-05  Score=62.77  Aligned_cols=29  Identities=24%  Similarity=0.517  Sum_probs=27.5

Q ss_pred             CCCCccccCccCcccCChHHHHHHHHhcC
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      .++|||+|.+|+|.|..+..|.+|+++|+
T Consensus         9 ~~ekpy~C~~CgK~F~~~s~L~~H~r~Ht   37 (66)
T 2epp_A            9 REAGILPCGLCGKVFTDANRLRQHEAQHG   37 (66)
T ss_dssp             CCCCCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             CCccCcCCCCCCCccCCHHHHHhhhhhhC
Confidence            36899999999999999999999999998

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.81  E-value=9e-06  Score=50.93  Aligned_cols=26  Identities=38%  Similarity=0.701  Sum_probs=24.9

Q ss_pred             CccccCccCcccCChHHHHHHHHhcC
Q 010863            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         4 kpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      |||+|++|++.|.....|..|+++|.
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHE   26 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGG
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhc
Confidence            68999999999999999999999997

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.81  E-value=1.2e-05  Score=50.25  Aligned_cols=26  Identities=42%  Similarity=1.003  Sum_probs=24.9

Q ss_pred             CccccCccCcccCChHHHHHHHHhcC
Q 010863            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         4 kpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      ++|+|++|++.|.....|..|+++|.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~   26 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHT   26 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhc
Confidence            68999999999999999999999997

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.79  E-value=6.6e-06  Score=58.77  Aligned_cols=38  Identities=16%  Similarity=0.430  Sum_probs=29.6

Q ss_pred             HhhhhhhccCCcccccC--cCCccccchhHHHHHHhh-hCC
Q 010863           69 IKKHFCRKHGEKKWKCD--KCSKRYAVQSDWKAHSKT-CGT  106 (498)
Q Consensus        69 Lk~H~r~Htgekp~~C~--~CgK~F~~~s~L~~H~r~-hge  106 (498)
                      +..|...|+++++|+|+  .|+|.|.....|++|+++ +++
T Consensus         6 ~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            34556678888888885  688888888888888888 454

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.77  E-value=1.4e-05  Score=50.08  Aligned_cols=26  Identities=19%  Similarity=0.478  Sum_probs=24.9

Q ss_pred             CccccCccCcccCChHHHHHHHHhcC
Q 010863            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         4 kpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      ++|+|++|++.|.....|..|+++|+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~   26 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHc
Confidence            68999999999999999999999997

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.77  E-value=9.5e-06  Score=58.35  Aligned_cols=27  Identities=30%  Similarity=0.637  Sum_probs=13.1

Q ss_pred             ccCCcccccCcCCccccchhHHHHHHh
Q 010863           76 KHGEKKWKCDKCSKRYAVQSDWKAHSK  102 (498)
Q Consensus        76 Htgekp~~C~~CgK~F~~~s~L~~H~r  102 (498)
                      |+++|+|.|.+|+|.|.....|++|++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~   28 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYA   28 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHH
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhh
Confidence            444444444444444444444444444

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.76  E-value=1.2e-05  Score=54.10  Aligned_cols=29  Identities=28%  Similarity=0.606  Sum_probs=27.0

Q ss_pred             CCCCccccCc--cCcccCChHHHHHHHHhcC
Q 010863            1 MATNRFVCEI--CNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         1 ~gekpy~C~~--CgK~F~~~s~L~~H~r~H~   29 (498)
                      +++++|+|.+  |+|.|.....|.+|+++|.
T Consensus         4 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~   34 (37)
T 1va1_A            4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHT   34 (37)
T ss_dssp             SSCCCEECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            4789999995  9999999999999999997

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.95  E-value=3.8e-06  Score=51.73  Aligned_cols=26  Identities=38%  Similarity=0.763  Sum_probs=24.3

Q ss_pred             CccccCccCcccCChHHHHHHHHhcC
Q 010863            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         4 kpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      |||+|++|++.|.....|..|+++|.
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            68999999999999999999999873

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.75  E-value=1.5e-05  Score=52.94  Aligned_cols=27  Identities=22%  Similarity=0.565  Sum_probs=12.5

Q ss_pred             cCCcccccCcCCccccchhHHHHHHhh
Q 010863           77 HGEKKWKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        77 tgekp~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      .++++|.|++|++.|.....|..|+++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2els_A            5 SSGKIFTCEYCNKVFKFKHSLQAHLRI   31 (36)
T ss_dssp             SCCCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCEECCCCCceeCCHHHHHHHHHH
Confidence            344444444444444444444444444

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.91  E-value=4.5e-06  Score=52.71  Aligned_cols=27  Identities=33%  Similarity=0.593  Sum_probs=25.7

Q ss_pred             CCccccCccCcccCChHHHHHHHHhcC
Q 010863            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         3 ekpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      ++||+|++|++.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHT   27 (30)
Confidence            589999999999999999999999997

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.72  E-value=1.3e-05  Score=49.78  Aligned_cols=26  Identities=31%  Similarity=0.547  Sum_probs=24.9

Q ss_pred             CccccCccCcccCChHHHHHHHHhcC
Q 010863            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         4 kpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      |||+|++|++.|.....|..|+++|.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~   26 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHI   26 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHH
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhc
Confidence            68999999999999999999999987

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.72  E-value=2e-05  Score=50.71  Aligned_cols=27  Identities=30%  Similarity=0.800  Sum_probs=25.8

Q ss_pred             CCccccC--ccCcccCChHHHHHHHHhcC
Q 010863            3 TNRFVCE--ICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         3 ekpy~C~--~CgK~F~~~s~L~~H~r~H~   29 (498)
                      ++||+|.  .|++.|.....|.+|+++|.
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~   29 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHcc
Confidence            6899999  89999999999999999997

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.71  E-value=2.8e-05  Score=60.80  Aligned_cols=18  Identities=11%  Similarity=0.324  Sum_probs=7.1

Q ss_pred             CCccCChhhHhhhhhhcc
Q 010863           60 SRALGDLTGIKKHFCRKH   77 (498)
Q Consensus        60 ~k~F~~~s~Lk~H~r~Ht   77 (498)
                      +|.|..+..|++|+++|+
T Consensus        20 gK~F~~~s~L~~H~r~Ht   37 (66)
T 2epp_A           20 GKVFTDANRLRQHEAQHG   37 (66)
T ss_dssp             CCCCSCHHHHHHHHHHHT
T ss_pred             CCccCCHHHHHhhhhhhC
Confidence            333333333333333333

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.71  E-value=1.5e-05  Score=49.69  Aligned_cols=26  Identities=35%  Similarity=0.608  Sum_probs=24.9

Q ss_pred             CccccCccCcccCChHHHHHHHHhcC
Q 010863            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         4 kpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      ++|+|++|++.|.....|..|+++|.
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHS   26 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHH
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhc
Confidence            68999999999999999999999997

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.68  E-value=5.8e-06  Score=53.93  Aligned_cols=31  Identities=13%  Similarity=0.203  Sum_probs=26.0

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCccc
Q 010863           45 KVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKW   82 (498)
Q Consensus        45 k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~   82 (498)
                      ++|.|++|       ++.|.....|.+|+++|+++++|
T Consensus         1 kp~~C~~C-------~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPAC-------PKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSS-------CTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCC-------CcccCCHHHHHHHHHHHccCCCC
Confidence            46888888       88888888888888888888876

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.83  E-value=6.3e-06  Score=51.87  Aligned_cols=26  Identities=31%  Similarity=0.638  Sum_probs=24.8

Q ss_pred             CccccCccCcccCChHHHHHHHHhcC
Q 010863            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         4 kpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      |||+|++|++.|.....|..|+++|+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHT   26 (29)
Confidence            68999999999999999999999997

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.64  E-value=2.4e-05  Score=54.28  Aligned_cols=30  Identities=13%  Similarity=0.160  Sum_probs=17.9

Q ss_pred             cCcceeCCC--CCCCCCCCCCccCChhhHhhhhhhccCC
Q 010863           43 RKKVYVCPE--PNCVHHDPSRALGDLTGIKKHFCRKHGE   79 (498)
Q Consensus        43 ~~k~y~C~~--C~C~~~~~~k~F~~~s~Lk~H~r~Htge   79 (498)
                      ++++|+|++  |       ++.|..++.|++|+++|+++
T Consensus         6 gekp~~C~~~~C-------~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            6 SGILLKCPTDGC-------DYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CCCCEECSSSSC-------CCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCC-------CCccCCHHHHHHHHHhcCCC
Confidence            556666654  5       56666666666666666554

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.63  E-value=2.8e-05  Score=49.72  Aligned_cols=26  Identities=42%  Similarity=0.898  Sum_probs=24.8

Q ss_pred             CccccC--ccCcccCChHHHHHHHHhcC
Q 010863            4 NRFVCE--ICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         4 kpy~C~--~CgK~F~~~s~L~~H~r~H~   29 (498)
                      +||+|+  +|++.|.....|..|+++|.
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~   28 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHT   28 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTS
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhc
Confidence            689998  99999999999999999997

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.58  E-value=3.6e-05  Score=51.67  Aligned_cols=28  Identities=29%  Similarity=0.471  Sum_probs=13.9

Q ss_pred             ccCCcccccCc--CCccccchhHHHHHHhh
Q 010863           76 KHGEKKWKCDK--CSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        76 Htgekp~~C~~--CgK~F~~~s~L~~H~r~  103 (498)
                      |+++++|.|.+  |+|.|.....|.+|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~   32 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRW   32 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHh
Confidence            34445555542  55555555555555544

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.57  E-value=3.2e-05  Score=47.55  Aligned_cols=25  Identities=28%  Similarity=0.748  Sum_probs=23.2

Q ss_pred             ccccCccCcccCChHHHHHHHHhcC
Q 010863            5 RFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         5 py~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      ||+|++|+|.|..+..|.+|+++|.
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcC
Confidence            6999999999999999999999986

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.52  E-value=3.8e-05  Score=48.34  Aligned_cols=26  Identities=31%  Similarity=0.759  Sum_probs=24.2

Q ss_pred             CccccCccCcccCChHHHHHH-HHhcC
Q 010863            4 NRFVCEICNKGFQRDQNLQLH-RRGHN   29 (498)
Q Consensus         4 kpy~C~~CgK~F~~~s~L~~H-~r~H~   29 (498)
                      +||+|++|++.|.....|..| +++|.
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~   27 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHS   27 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHcc
Confidence            689999999999999999999 68886

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.49  E-value=5.8e-05  Score=47.15  Aligned_cols=28  Identities=25%  Similarity=0.396  Sum_probs=18.4

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHhhhhhhccCC
Q 010863           45 KVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGE   79 (498)
Q Consensus        45 k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htge   79 (498)
                      ++|.|.+|       ++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C-------~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYC-------GRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTT-------CCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCC-------CcccCCHHHHHHHHHHhccC
Confidence            56666666       66666666666666666654

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.42  E-value=6.9e-05  Score=46.67  Aligned_cols=28  Identities=14%  Similarity=0.298  Sum_probs=17.9

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHhhhhhhccCC
Q 010863           45 KVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGE   79 (498)
Q Consensus        45 k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htge   79 (498)
                      ++|.|++|       ++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C-------~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPEC-------PKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSS-------SCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCC-------CchhCCHHHHHHHHHHhcCC
Confidence            35666666       66666666666666666654

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.38  E-value=8.8e-05  Score=46.09  Aligned_cols=27  Identities=26%  Similarity=0.530  Sum_probs=15.4

Q ss_pred             ceeCCCCCCCCCCCCCccCChhhHhhhhhhccCC
Q 010863           46 VYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGE   79 (498)
Q Consensus        46 ~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htge   79 (498)
                      +|.|++|       ++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C-------~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVC-------TRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTT-------CCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCC-------CcccCCHHHHHHHHHHhcCC
Confidence            4555555       55555555555555555544

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.38  E-value=7.4e-05  Score=46.44  Aligned_cols=26  Identities=27%  Similarity=0.689  Sum_probs=24.6

Q ss_pred             CccccC--ccCcccCChHHHHHHHHhcC
Q 010863            4 NRFVCE--ICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         4 kpy~C~--~CgK~F~~~s~L~~H~r~H~   29 (498)
                      ++|+|+  +|++.|.....|..|+++|.
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            689999  99999999999999999985

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.33  E-value=0.00012  Score=46.91  Aligned_cols=20  Identities=10%  Similarity=0.104  Sum_probs=11.9

Q ss_pred             CCccCChhhHhhhhhhccCC
Q 010863           60 SRALGDLTGIKKHFCRKHGE   79 (498)
Q Consensus        60 ~k~F~~~s~Lk~H~r~Htge   79 (498)
                      ++.|.....|.+|+++|+++
T Consensus        12 ~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A           12 DKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCCBSSSHHHHHHHGGGTCC
T ss_pred             CCccCCHHHHHHHHHHccCC
Confidence            56666666666666666554

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.32  E-value=9.7e-05  Score=45.78  Aligned_cols=27  Identities=22%  Similarity=0.388  Sum_probs=16.2

Q ss_pred             ceeCCCCCCCCCCCCCccCChhhHhhhhhhccCC
Q 010863           46 VYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGE   79 (498)
Q Consensus        46 ~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htge   79 (498)
                      +|.|++|       ++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C-------~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCREC-------GKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTT-------SCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCC-------CCccCChhHHHHHHHHhcCC
Confidence            4566666       56666666666666666554

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.31  E-value=0.0001  Score=45.95  Aligned_cols=20  Identities=25%  Similarity=0.338  Sum_probs=10.2

Q ss_pred             CCccCChhhHhhhhhhccCC
Q 010863           60 SRALGDLTGIKKHFCRKHGE   79 (498)
Q Consensus        60 ~k~F~~~s~Lk~H~r~Htge   79 (498)
                      ++.|.....|..|+++|+++
T Consensus         9 ~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            9 EFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             SCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccCCHHHHHHHHHHHccC
Confidence            45555555555555555444

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.31  E-value=0.00013  Score=46.48  Aligned_cols=29  Identities=17%  Similarity=0.399  Sum_probs=18.6

Q ss_pred             cceeCC--CCCCCCCCCCCccCChhhHhhhhhhccCCc
Q 010863           45 KVYVCP--EPNCVHHDPSRALGDLTGIKKHFCRKHGEK   80 (498)
Q Consensus        45 k~y~C~--~C~C~~~~~~k~F~~~s~Lk~H~r~Htgek   80 (498)
                      ++|.|+  +|       ++.|.....|..|+++|++++
T Consensus         1 kp~~C~~~~C-------~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYC-------GKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTC-------CCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCC-------CcccCCHhHHHHHHHHhcCCC
Confidence            356665  55       666766677777766666653

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.29  E-value=9.9e-05  Score=45.63  Aligned_cols=20  Identities=10%  Similarity=0.288  Sum_probs=10.4

Q ss_pred             CCccCChhhHhhhhhhccCC
Q 010863           60 SRALGDLTGIKKHFCRKHGE   79 (498)
Q Consensus        60 ~k~F~~~s~Lk~H~r~Htge   79 (498)
                      ++.|.....|..|+++|+++
T Consensus         9 ~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            9 DKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCTTTHHHHHHHHHHSC
T ss_pred             CcccCCHHHHHHHHHHhccC
Confidence            45555555555555555443

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.23  E-value=0.00016  Score=44.80  Aligned_cols=26  Identities=12%  Similarity=0.298  Sum_probs=14.3

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHhhhhhhcc
Q 010863           45 KVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKH   77 (498)
Q Consensus        45 k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Ht   77 (498)
                      ++|.|++|       ++.|.....|..|+++|+
T Consensus         2 k~~~C~~C-------~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVC-------GKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSS-------CCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCC-------CcccCCHHHHHHHHHhcC
Confidence            44555555       555555555555555554

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.30  E-value=5e-05  Score=47.66  Aligned_cols=28  Identities=32%  Similarity=0.558  Sum_probs=16.5

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHhhhhhhccCC
Q 010863           45 KVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGE   79 (498)
Q Consensus        45 k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htge   79 (498)
                      ++|.|.+|       ++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C-------~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHC-------QRQFADPGALQRHVRIHTGE   29 (30)
Confidence            45566665       56666666666666665544

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.29  E-value=5.1e-05  Score=47.51  Aligned_cols=27  Identities=19%  Similarity=0.310  Sum_probs=16.7

Q ss_pred             ceeCCCCCCCCCCCCCccCChhhHhhhhhhccCC
Q 010863           46 VYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGE   79 (498)
Q Consensus        46 ~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htge   79 (498)
                      +|.|++|       ++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C-------~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMC-------GKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            4666666       56666666666666666554

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.14  E-value=0.00018  Score=51.10  Aligned_cols=33  Identities=15%  Similarity=0.341  Sum_probs=29.6

Q ss_pred             cccCcceeCC--CCCCCCCCCCCccCChhhHhhhhhhccCCc
Q 010863           41 EIRKKVYVCP--EPNCVHHDPSRALGDLTGIKKHFCRKHGEK   80 (498)
Q Consensus        41 ~~~~k~y~C~--~C~C~~~~~~k~F~~~s~Lk~H~r~Htgek   80 (498)
                      |.++++|.|+  .|       ++.|.....|++|+++|+++|
T Consensus        13 H~~~k~~~C~~~~C-------~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A           13 EMPDKTFECLFPGC-------TKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EETTTEEECCCTTC-------CCEECSSSSHHHHHHHHTTTC
T ss_pred             cCCCCCeECCCCCC-------CCccCCHHHHHHHHHHccCCC
Confidence            4489999996  68       999999999999999999875

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.14  E-value=0.00019  Score=44.12  Aligned_cols=24  Identities=29%  Similarity=0.501  Sum_probs=12.8

Q ss_pred             cccccCcCCccccchhHHHHHHhh
Q 010863           80 KKWKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        80 kp~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      ++|.|++|++.|.....|..|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRT   25 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHH
T ss_pred             cCccCCCcChhhCCHHHHHHHHHH
Confidence            455555555555555555555544

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.10  E-value=0.00025  Score=44.38  Aligned_cols=27  Identities=22%  Similarity=0.292  Sum_probs=16.3

Q ss_pred             ceeCCCCCCCCCCCCCccCChhhHhhh-hhhccCC
Q 010863           46 VYVCPEPNCVHHDPSRALGDLTGIKKH-FCRKHGE   79 (498)
Q Consensus        46 ~y~C~~C~C~~~~~~k~F~~~s~Lk~H-~r~Htge   79 (498)
                      +|.|++|       ++.|.....|..| +++|+++
T Consensus         2 ~~~C~~C-------~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLC-------NRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTT-------CCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCccc-------CcccCChHHHHHHHHHHccCC
Confidence            4566666       5666666666666 4566554

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.09  E-value=0.00028  Score=43.09  Aligned_cols=25  Identities=16%  Similarity=0.319  Sum_probs=14.6

Q ss_pred             eeCCCCCCCCCCCCCccCChhhHhhhhhhccC
Q 010863           47 YVCPEPNCVHHDPSRALGDLTGIKKHFCRKHG   78 (498)
Q Consensus        47 y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htg   78 (498)
                      |.|.+|       ++.|.....|.+|+++|++
T Consensus         2 ~~C~~C-------~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            2 YKCGLC-------ERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             CBCSSS-------CCBCSSHHHHHHHGGGTCC
T ss_pred             ccCCCC-------CCcCCCHHHHHHHHHHcCC
Confidence            555555       5666666666666655554

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.09  E-value=0.00017  Score=44.67  Aligned_cols=24  Identities=17%  Similarity=0.450  Sum_probs=12.3

Q ss_pred             cccccCcCCccccchhHHHHHHhh
Q 010863           80 KKWKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        80 kp~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      ++|+|++|++.|.....|.+|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRG   25 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTT
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHh
Confidence            445555555555555555555443

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.80  E-value=0.0014  Score=50.51  Aligned_cols=21  Identities=10%  Similarity=0.265  Sum_probs=13.0

Q ss_pred             CCccCChhhHhhhh-hhccCCc
Q 010863           60 SRALGDLTGIKKHF-CRKHGEK   80 (498)
Q Consensus        60 ~k~F~~~s~Lk~H~-r~Htgek   80 (498)
                      ++.|.+...|..|+ +.|.+.+
T Consensus        10 ~~~f~~~~~l~~Hv~~~Hv~~~   31 (64)
T 1zw8_A           10 PESASSLFDLQRHLLKDHVSQD   31 (64)
T ss_dssp             CCCCSSHHHHHHHHHHHSCCCC
T ss_pred             CCcCCCHHHHHHHHHhhccCcc
Confidence            66777777777776 3555443

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=95.76  E-value=0.00024  Score=43.26  Aligned_cols=23  Identities=26%  Similarity=0.735  Sum_probs=11.7

Q ss_pred             ccccCcCCccccchhHHHHHHhh
Q 010863           81 KWKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        81 p~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      +|.|++|++.|.....|..|+++
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~   24 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRH   24 (26)
Confidence            45555555555555555555443

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=96.47  E-value=0.0011  Score=40.91  Aligned_cols=18  Identities=17%  Similarity=0.259  Sum_probs=9.1

Q ss_pred             CCccCChhhHhhhhhhcc
Q 010863           60 SRALGDLTGIKKHFCRKH   77 (498)
Q Consensus        60 ~k~F~~~s~Lk~H~r~Ht   77 (498)
                      ++.|.....|.+|+++|+
T Consensus        11 ~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A           11 GRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEESSHHHHHHHHGGGT
T ss_pred             cCccCCHHHHHHHHHHhC
Confidence            455555555555555443

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.38  E-value=0.0013  Score=57.85  Aligned_cols=25  Identities=20%  Similarity=0.452  Sum_probs=18.3

Q ss_pred             CccccCccCcccCChHHHHHHH--Hhc
Q 010863            4 NRFVCEICNKGFQRDQNLQLHR--RGH   28 (498)
Q Consensus         4 kpy~C~~CgK~F~~~s~L~~H~--r~H   28 (498)
                      +++.|.+|+..|.....+..|.  +.|
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH   57 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKH   57 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHH
Confidence            4567888888888777777777  445

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.27  E-value=0.0058  Score=47.01  Aligned_cols=60  Identities=20%  Similarity=0.236  Sum_probs=42.7

Q ss_pred             cccC--ccCcccCChHHHHHHHH-hcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhcc
Q 010863            6 FVCE--ICNKGFQRDQNLQLHRR-GHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKH   77 (498)
Q Consensus         6 y~C~--~CgK~F~~~s~L~~H~r-~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Ht   77 (498)
                      |.|.  .|++.|.+...|..|+. .|.+...       ......|.|..=+|     ++.+.....|..|++..+
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~-------~~~~~~~~C~W~~C-----~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDF-------KHPMEPLACNWEDC-----DFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCC-------CCSSCCEECCCSSC-----CCEESSHHHHHHHHHHHC
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCccc-------CCCCCCCEeeCCCC-----cCCCCChHHHHhhccccC
Confidence            4554  49999999999999984 6752100       00123799986655     888888889999988653

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.81  E-value=0.0075  Score=52.76  Aligned_cols=32  Identities=16%  Similarity=0.311  Sum_probs=25.0

Q ss_pred             hhhhccCCcccccCcCCccccchhHHHHHHhh
Q 010863           72 HFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        72 H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      +...|+|+++|.|..|+|.|.+...|..|+++
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            44567888888888888888888888888765

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=94.75  E-value=0.062  Score=48.72  Aligned_cols=77  Identities=18%  Similarity=0.441  Sum_probs=46.6

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCceecC-CCCccCCh
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREYRCD-CGTLFSRR  120 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy~C~-Cgk~F~~~  120 (498)
                      .+....|+.-+|     .+.+ ....+..|.. .-..++..|+.|+..+ .+..|..|... ...+.-.|. |+..|...
T Consensus        79 ~~l~v~C~n~GC-----~~~~-~~~~l~~H~~-~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~~  150 (170)
T 3hcs_A           79 LSLMVKCPNEGC-----LHKM-ELRHLEDHQA-HCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAFE  150 (170)
T ss_dssp             HTSEEECCSTTC-----CCEE-EGGGHHHHHT-TCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEGG
T ss_pred             hhcccCCCCCCC-----Ccee-cHhHHHHHHh-cCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCHH
Confidence            344556654344     4433 3455666653 2234566777787776 45667778765 667777788 87777553


Q ss_pred             HHHHHHHH
Q 010863          121 DSFITHRA  128 (498)
Q Consensus       121 s~L~~H~~  128 (498)
                       .|..|..
T Consensus       151 -~l~~H~~  157 (170)
T 3hcs_A          151 -DKEIHDQ  157 (170)
T ss_dssp             -GHHHHHT
T ss_pred             -HHHhHHH
Confidence             4677773

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.74  E-value=0.0062  Score=53.26  Aligned_cols=28  Identities=25%  Similarity=0.390  Sum_probs=25.7

Q ss_pred             CCCCccccCccCcccCChHHHHHHHHhc
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRRGH   28 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r~H   28 (498)
                      +|+++|.|.+|+|.|.+...|..|+++.
T Consensus        46 tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           46 PGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             GGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             CCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            4789999999999999999999998865

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=93.15  E-value=0.016  Score=50.77  Aligned_cols=74  Identities=15%  Similarity=0.186  Sum_probs=47.5

Q ss_pred             CcceeCCCCCCCCCCCCCccCChhhHhhhh--hhccCC-cccccCcC------CccccchhHHHHHHhh-hCCCceecC-
Q 010863           44 KKVYVCPEPNCVHHDPSRALGDLTGIKKHF--CRKHGE-KKWKCDKC------SKRYAVQSDWKAHSKT-CGTREYRCD-  112 (498)
Q Consensus        44 ~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~--r~Htge-kp~~C~~C------gK~F~~~s~L~~H~r~-hgekpy~C~-  112 (498)
                      .+++.|.+|       ...|.+...+..|.  +.|... +.|.+..+      ++.|....    +... .+.+.|.|+ 
T Consensus        30 ~~~~~C~~C-------~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~   98 (127)
T 1zu1_A           30 FSDTQCKVC-------SAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPV   98 (127)
T ss_dssp             BCSSEETTT-------TEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETT
T ss_pred             CCCCcCcCC-------CCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCC
Confidence            466889999       78899999999998  566532 34444211      22222111    1112 345678898 


Q ss_pred             CCCccCChHHHHHHHH
Q 010863          113 CGTLFSRRDSFITHRA  128 (498)
Q Consensus       113 Cgk~F~~~s~L~~H~~  128 (498)
                      |.+.|.....|..|..
T Consensus        99 C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           99 CNMTFSSPVVAESHYI  114 (127)
T ss_dssp             TTEECSSHHHHHHHHT
T ss_pred             CCCEeCCHHHHHHHHC
Confidence            9999999888888873

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=91.86  E-value=0.09  Score=37.99  Aligned_cols=25  Identities=28%  Similarity=0.444  Sum_probs=22.8

Q ss_pred             CccccCccCcccCChHHHHHHHHhc
Q 010863            4 NRFVCEICNKGFQRDQNLQLHRRGH   28 (498)
Q Consensus         4 kpy~C~~CgK~F~~~s~L~~H~r~H   28 (498)
                      .+|.|+.|++.|.....|+.||+..
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmkyc   35 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYC   35 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhhc
Confidence            5799999999999999999999844

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=91.00  E-value=0.15  Score=36.84  Aligned_cols=21  Identities=19%  Similarity=0.533  Sum_probs=9.1

Q ss_pred             cccCcCCccccchhHHHHHHh
Q 010863           82 WKCDKCSKRYAVQSDWKAHSK  102 (498)
Q Consensus        82 ~~C~~CgK~F~~~s~L~~H~r  102 (498)
                      |.|+.|++.|.....|+.||+
T Consensus        13 ~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           13 KICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CCCTTTCCCCSSHHHHHHHHH
T ss_pred             eeCCcccccccchHHHHhhhh
Confidence            344444444444444444443

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=90.72  E-value=0.23  Score=44.85  Aligned_cols=58  Identities=21%  Similarity=0.331  Sum_probs=43.5

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhh-hCCCce
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGTREY  109 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hgekpy  109 (498)
                      .-++..|+.|       +..+ .+..|..|+...-..+...|.+|+..|. ...|..|..+ .|+.+|
T Consensus       107 ~~~~v~C~~C-------~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~-~~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          107 EFALMDCPQC-------QRPF-QKFHINIHILKDCPRRQVSCDNCAASMA-FEDKEIHDQNCPLALEH  165 (170)
T ss_dssp             TTSEEECTTT-------CCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEE-GGGHHHHHTTCCC----
T ss_pred             CceeeECCCC-------ChHH-HHHHHHHHhhhhCCCCCeECCCCCCccC-HHHHHhHHHhCcChhhh
Confidence            3456789877       6666 6778999998878888899999999875 5678999988 676554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	498
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.38
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.34
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.92
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.79
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.75
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.72
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.72
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.69
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.66
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.62
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.61
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.6
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.57
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.56
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.54
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.53
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.51
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.49
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.49
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.47
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.43
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.42
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.36
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.32
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.22
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.22
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.18
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.13
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.11
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.1
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.1
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.09
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.02
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.02
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.0
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.98
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.89
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.88
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.81
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.74
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.72
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	97.69
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.57
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.44
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.37
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.11
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.06
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.0
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.94
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.91
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.88
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.84
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.74
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.66
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.62
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.55
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.54
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.45
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.36
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	96.29
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.28
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.1
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.02
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.0
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	95.99
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	95.93
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	95.91
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.54
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	95.52
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.46
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.35
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.3
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.24
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	95.2
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.16
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.96
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	94.75
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.37
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.24
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	94.12
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.09
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.0
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.66
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	93.59
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.59
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	93.56
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	93.49
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	92.95
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	92.74
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	92.01
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	91.89
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	91.65
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	91.56
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	90.82
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	90.38
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	89.53
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	88.66
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	88.15
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	86.93
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	86.71
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	84.25
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	82.78

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.1e-13  Score=102.32  Aligned_cols=53  Identities=17%  Similarity=0.295  Sum_probs=34.1

Q ss_pred             CCccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhc
Q 010863            3 TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRK   76 (498)
Q Consensus         3 ekpy~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H   76 (498)
                      ||||+|+ |||.|..+..|..|+++|.             ++++|.|.+|       ++.|.....|.+|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht-------------~ekpy~C~~C-------~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHL-------------GLRPYGCGVC-------GKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHS-------------CCCSEECTTT-------SCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccc-------------cccCCcCCCc-------CCEecCHHHHHHHHhcC
Confidence            5666663 6666666666666666666             6666666666       66666666666666654

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=2.2e-13  Score=100.70  Aligned_cols=52  Identities=19%  Similarity=0.519  Sum_probs=37.1

Q ss_pred             CcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCcCCccccchhHHHHHHhh
Q 010863           44 KKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        44 ~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      ||+|.| +|       ++.|..+..|..|+++|++++||.|.+|++.|...+.|.+|+++
T Consensus         1 EK~y~C-~C-------gk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~   52 (53)
T d2csha1           1 DKLYPC-QC-------GKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI   52 (53)
T ss_dssp             CCCEEC-TT-------SCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTT
T ss_pred             CcCCCC-CC-------CCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhc
Confidence            467777 36       67777777777777777777777777777777777777777664

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=2.7e-10  Score=78.47  Aligned_cols=38  Identities=26%  Similarity=0.608  Sum_probs=34.6

Q ss_pred             CCCCccccCccCcccCChHHHHHHHH-hcCCCccccccccccccCcceeCCC
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRR-GHNLPWKLKQRTSKEIRKKVYVCPE   51 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r-~H~~p~~c~~~~~~~~~~k~y~C~~   51 (498)
                      +.+|||+|++|||.|....+|++|++ +|+             ++|||+|++
T Consensus         1 s~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht-------------~ekpy~C~i   39 (39)
T d2epsa1           1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHT-------------SERPHKCQV   39 (39)
T ss_dssp             CSSCCEECSSSCCEESSHHHHHHHHHHTSC-------------CCCCCCSSS
T ss_pred             CCCCCccCCCCCCCcCChHHhhccCcCccC-------------CCcCcCCcC
Confidence            35899999999999999999999986 798             999999974

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=9.3e-10  Score=75.44  Aligned_cols=36  Identities=28%  Similarity=0.677  Sum_probs=30.6

Q ss_pred             hhhhhccCCcccccCcCCccccchhHHHHHHhh-hCC
Q 010863           71 KHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGT  106 (498)
Q Consensus        71 ~H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hge  106 (498)
                      +|+++|+++|||+|++|+|.|...++|.+|+++ +||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            688888899999999899988888888888888 554

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.75  E-value=1.7e-09  Score=73.60  Aligned_cols=33  Identities=18%  Similarity=0.426  Sum_probs=29.3

Q ss_pred             hhhhccCCcccccCcCCccccchhHHHHHHhhh
Q 010863           72 HFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTC  104 (498)
Q Consensus        72 H~r~Htgekp~~C~~CgK~F~~~s~L~~H~r~h  104 (498)
                      |.|+|+|||||+|++|+|.|.++++|++|+++|
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H   34 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcC
Confidence            778899999999999999999999999998874

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.72  E-value=2.5e-09  Score=71.80  Aligned_cols=29  Identities=31%  Similarity=0.583  Sum_probs=28.2

Q ss_pred             CCCCccccCccCcccCChHHHHHHHHhcC
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      +|||||+|++|+|.|..+.+|++|+++|.
T Consensus         3 TGekPy~C~~C~k~F~~~~~L~~H~r~Ht   31 (35)
T d1srka_           3 SGKRPFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             SCCSCEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             CCCccccCCCCCCcccChHHHHHHccccC
Confidence            69999999999999999999999999997

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=2.6e-09  Score=73.46  Aligned_cols=37  Identities=19%  Similarity=0.396  Sum_probs=28.8

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhh-hccCCcccccCc
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFC-RKHGEKKWKCDK   86 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r-~Htgekp~~C~~   86 (498)
                      .+|+|+|.+|       +|.|.....|++|++ +|++||||+|++
T Consensus         2 ~~Kpy~C~~C-------gk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSC-------GKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSS-------CCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCC-------CCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            3678888888       788888888888875 688888888864

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=3.7e-09  Score=71.48  Aligned_cols=31  Identities=26%  Similarity=0.512  Sum_probs=25.7

Q ss_pred             hhccCCcccccCcCCccccchhHHHHHHhhh
Q 010863           74 CRKHGEKKWKCDKCSKRYAVQSDWKAHSKTC  104 (498)
Q Consensus        74 r~Htgekp~~C~~CgK~F~~~s~L~~H~r~h  104 (498)
                      |+|+|||||+|.+|+|.|..++.|+.|+++|
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H   31 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRY   31 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHT
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCccc
Confidence            5788888888888888888888888888884

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=5.7e-09  Score=69.07  Aligned_cols=29  Identities=31%  Similarity=0.567  Sum_probs=28.2

Q ss_pred             CCCCccccCccCcccCChHHHHHHHHhcC
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      ||||||+|.+|||.|..++.|.+|+++|+
T Consensus         3 Tgekpy~C~~Cgk~F~~~~~L~~H~r~Ht   31 (33)
T d1x6ea1           3 SGEKPYGCVECGKAFSRSSILVQHQRVHT   31 (33)
T ss_dssp             TTCCCEECSSSCCEESSHHHHHHHHHGGG
T ss_pred             CCCCCeeCCCCCCEeCchHHhHhhccccC
Confidence            68999999999999999999999999997

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=7.5e-09  Score=68.47  Aligned_cols=29  Identities=28%  Similarity=0.543  Sum_probs=18.4

Q ss_pred             hccCCcccccCcCCccccchhHHHHHHhh
Q 010863           75 RKHGEKKWKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        75 ~Htgekp~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      +|+++|||+|.+|+|.|..++.|++|+++
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~   29 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRV   29 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHG
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccc
Confidence            35666666666666666666666666666

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.61  E-value=6.1e-09  Score=66.33  Aligned_cols=27  Identities=37%  Similarity=0.797  Sum_probs=26.2

Q ss_pred             CCccccCccCcccCChHHHHHHHHhcC
Q 010863            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         3 ekpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      ||||+|++|+|.|.++.+|.+|+|+|+
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HT   27 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHT   27 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHH
T ss_pred             CcCccCCCCcCEecccccccccCCCcc
Confidence            799999999999999999999999996

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=7.4e-09  Score=69.94  Aligned_cols=33  Identities=24%  Similarity=0.448  Sum_probs=26.0

Q ss_pred             hhccCCcccccCcCCccccchhHHHHHHhh-hCC
Q 010863           74 CRKHGEKKWKCDKCSKRYAVQSDWKAHSKT-CGT  106 (498)
Q Consensus        74 r~Htgekp~~C~~CgK~F~~~s~L~~H~r~-hge  106 (498)
                      |+|+|||||+|++|+|.|.++.+|++|++. |++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            468888888888888888888888888765 543

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=1.6e-08  Score=68.34  Aligned_cols=29  Identities=24%  Similarity=0.594  Sum_probs=28.2

Q ss_pred             CCCCccccCccCcccCChHHHHHHHHhcC
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      ||||||+|++|||.|..+.+|+.|+++|+
T Consensus         4 TgekPy~C~~C~k~F~~~~~L~~H~r~H~   32 (36)
T d1x6ha2           4 TGEKPYACSHCDKTFRQKQLLDMHFKRYH   32 (36)
T ss_dssp             CCCCCEECSSSSCEESSHHHHHHHHHHTT
T ss_pred             CCCCCEECCCCCCCcCCHhHHHHhCcccC
Confidence            69999999999999999999999999997

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.56  E-value=1.4e-08  Score=68.04  Aligned_cols=28  Identities=18%  Similarity=0.540  Sum_probs=15.6

Q ss_pred             ccCCcccccCcCCccccchhHHHHHHhh
Q 010863           76 KHGEKKWKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        76 Htgekp~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      |+|||||+|++|+|.|.++.+|++|+++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~   29 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKV   29 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGG
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccc
Confidence            4555555555555555555555555555

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.54  E-value=1.9e-08  Score=64.57  Aligned_cols=26  Identities=42%  Similarity=1.003  Sum_probs=25.5

Q ss_pred             CccccCccCcccCChHHHHHHHHhcC
Q 010863            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         4 kpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      |||+|++|+|.|..+++|++|+++|+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HT   26 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHT   26 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTT
T ss_pred             CcCCCCCCCCCCCCchHcccccCccc
Confidence            79999999999999999999999998

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=1.3e-08  Score=63.41  Aligned_cols=26  Identities=31%  Similarity=0.637  Sum_probs=24.9

Q ss_pred             CccccCccCcccCChHHHHHHHHhcC
Q 010863            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         4 kpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      |||+|++|||.|..+++|.+|+|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            79999999999999999999999984

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.51  E-value=2.5e-08  Score=67.72  Aligned_cols=29  Identities=34%  Similarity=0.772  Sum_probs=27.9

Q ss_pred             CCCCccccCccCcccCChHHHHHHHHhcC
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      +|||||+|++|+|.|..+.+|.+|+++|.
T Consensus         7 TgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           7 TGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            68999999999999999999999999995

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=9.7e-09  Score=70.22  Aligned_cols=30  Identities=23%  Similarity=0.497  Sum_probs=29.2

Q ss_pred             cCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCC
Q 010863           43 RKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGE   79 (498)
Q Consensus        43 ~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htge   79 (498)
                      ++|||+|++|       +|+|...+.|.+|+++|+||
T Consensus         9 ~ekpy~C~~C-------gK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           9 ERRRYKCDEC-------GKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CSCSSBCSSS-------CCBCSCHHHHHHHHTTTCCS
T ss_pred             CCCCEecCCC-------CceeeCHHHHHHhCccCCCC
Confidence            9999999999       99999999999999999986

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=2.9e-08  Score=63.69  Aligned_cols=26  Identities=35%  Similarity=0.756  Sum_probs=25.5

Q ss_pred             CccccCccCcccCChHHHHHHHHhcC
Q 010863            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         4 kpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      |||.|++|+|.|..+++|.+|+|+|+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Ht   26 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQ   26 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGG
T ss_pred             CCEECCcCCCeecchHHhhhhcCccC
Confidence            79999999999999999999999998

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=3.1e-08  Score=66.80  Aligned_cols=35  Identities=23%  Similarity=0.673  Sum_probs=30.5

Q ss_pred             eeCCCCCCCCCCCCCccCChhhHhhhhhhccCCcccccCc
Q 010863           47 YVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDK   86 (498)
Q Consensus        47 y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~~C~~   86 (498)
                      |.|++.+|     +|+|..+..|++|+++|+++|||+|++
T Consensus         2 f~C~~~~C-----~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPAC-----GKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTT-----CCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCC-----CCeeCChhHhccccCeeCCCCCEeCCC
Confidence            78888655     899999999999999999999999974

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=4.7e-08  Score=65.90  Aligned_cols=29  Identities=17%  Similarity=0.507  Sum_probs=26.7

Q ss_pred             CCCCccccCccCcccCChHHHHHHHHhcC
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      ||||||+|++|+|.|..+.+|++|++.++
T Consensus         4 TgekP~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           4 SGEKPYECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             SCCCSEECTTTCCEESCHHHHHHHHHHHS
T ss_pred             CCCCCEeCCCCcccccchHHHHHHccccc
Confidence            69999999999999999999999987654

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.42  E-value=2.6e-08  Score=71.20  Aligned_cols=40  Identities=23%  Similarity=0.405  Sum_probs=31.5

Q ss_pred             hhHhhhhhhccCCcccccCc--CCccccchhHHHHHHhh-hCCC
Q 010863           67 TGIKKHFCRKHGEKKWKCDK--CSKRYAVQSDWKAHSKT-CGTR  107 (498)
Q Consensus        67 s~Lk~H~r~Htgekp~~C~~--CgK~F~~~s~L~~H~r~-hgek  107 (498)
                      ..|.+|++ |+++|||+|.+  |+|.|.+.++|++|+++ +|||
T Consensus         5 ~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             chhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            34667775 88888888877  88888888888888888 5664

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=7.4e-08  Score=64.86  Aligned_cols=33  Identities=30%  Similarity=0.680  Sum_probs=31.0

Q ss_pred             cccCc--cCcccCChHHHHHHHHhcCCCccccccccccccCcceeCCC
Q 010863            6 FVCEI--CNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPE   51 (498)
Q Consensus         6 y~C~~--CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y~C~~   51 (498)
                      |+|++  |+|.|.++.+|++|+++|+             ++|||+|+.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Ht-------------gekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHS-------------DTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHH-------------TSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeC-------------CCCCEeCCC
Confidence            88987  9999999999999999999             999999974

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.32  E-value=1.3e-07  Score=60.58  Aligned_cols=29  Identities=28%  Similarity=0.561  Sum_probs=19.0

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCc
Q 010863           45 KVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEK   80 (498)
Q Consensus        45 k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgek   80 (498)
                      |||.|++|       ++.|...+.|++|+++|+|||
T Consensus         1 kp~~C~~C-------~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVC-------TRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTT-------CCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCC-------CCCCCCchHcccccCcccCCC
Confidence            45666666       666666666666666666664

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.22  E-value=2.1e-07  Score=59.03  Aligned_cols=28  Identities=18%  Similarity=0.328  Sum_probs=15.3

Q ss_pred             CcceeCCCCCCCCCCCCCccCChhhHhhhhhhccC
Q 010863           44 KKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHG   78 (498)
Q Consensus        44 ~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htg   78 (498)
                      ||||+|++|       +|.|..++.|++|+++|+|
T Consensus         1 EKPy~C~~C-------~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRIC-------MRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTT-------CCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCC-------cCEecccccccccCCCccC
Confidence            355555555       5555555555555555543

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=2.5e-07  Score=59.16  Aligned_cols=29  Identities=24%  Similarity=0.463  Sum_probs=18.2

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCc
Q 010863           45 KVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEK   80 (498)
Q Consensus        45 k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgek   80 (498)
                      |+|.|++|       +|.|..++.|.+|+++|+|||
T Consensus         1 Kpy~C~~C-------~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPEC-------PKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTT-------TCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcC-------CCeecchHHhhhhcCccCCcC
Confidence            45666666       566666666666666666654

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=4.4e-07  Score=58.46  Aligned_cols=26  Identities=35%  Similarity=0.731  Sum_probs=25.2

Q ss_pred             CccccCc--cCcccCChHHHHHHHHhcC
Q 010863            4 NRFVCEI--CNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         4 kpy~C~~--CgK~F~~~s~L~~H~r~H~   29 (498)
                      |||+|++  |+|.|.++++|++|+|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~Ht   28 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHT   28 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCc
Confidence            7999999  9999999999999999998

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=4.4e-07  Score=58.46  Aligned_cols=26  Identities=42%  Similarity=0.740  Sum_probs=25.0

Q ss_pred             CccccCc--cCcccCChHHHHHHHHhcC
Q 010863            4 NRFVCEI--CNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         4 kpy~C~~--CgK~F~~~s~L~~H~r~H~   29 (498)
                      |||+|++  |+|.|.++++|++|+|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HT   28 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHT   28 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             CCccCCCCCCCceECcHHHcCccccccC
Confidence            7999988  9999999999999999997

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.11  E-value=1e-07  Score=68.08  Aligned_cols=35  Identities=20%  Similarity=0.507  Sum_probs=30.9

Q ss_pred             cccCcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCc
Q 010863           41 EIRKKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEK   80 (498)
Q Consensus        41 ~~~~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgek   80 (498)
                      +.++++|.|.+-+|     ++.|...+.|++|+++|+|||
T Consensus        13 h~gekpy~C~~~~C-----~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          13 EMPDKTFECLFPGC-----TKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EETTTEEECCCTTC-----CCEECSSSSHHHHHHHHTTTC
T ss_pred             ccCCCCeECCcCCC-----CccccCchHHHhhcccccCCC
Confidence            44999999998333     999999999999999999986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=7.7e-07  Score=55.23  Aligned_cols=24  Identities=33%  Similarity=0.863  Sum_probs=13.2

Q ss_pred             CceecC-CCCccCChHHHHHHHHHh
Q 010863          107 REYRCD-CGTLFSRRDSFITHRAFC  130 (498)
Q Consensus       107 kpy~C~-Cgk~F~~~s~L~~H~~~h  130 (498)
                      |||.|. |||.|.+++.|.+|+++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            455555 555555555555555443

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=7.7e-07  Score=57.74  Aligned_cols=31  Identities=19%  Similarity=0.502  Sum_probs=24.3

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCc
Q 010863           45 KVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEK   80 (498)
Q Consensus        45 k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgek   80 (498)
                      |||.|++-+|     +|.|...+.|++|+++|+|||
T Consensus         1 kpf~C~~~~C-----~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYC-----GKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTC-----CCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCC-----CcCcCChhHhhhhcCcccccC
Confidence            5788876555     888888888888888888875

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.09  E-value=7.6e-07  Score=58.16  Aligned_cols=27  Identities=30%  Similarity=0.828  Sum_probs=26.1

Q ss_pred             CCccccCc--cCcccCChHHHHHHHHhcC
Q 010863            3 TNRFVCEI--CNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         3 ekpy~C~~--CgK~F~~~s~L~~H~r~H~   29 (498)
                      ||||.|++  |+|.|.+..+|++|+++|.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            79999998  9999999999999999997

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=1.2e-06  Score=56.76  Aligned_cols=26  Identities=42%  Similarity=0.898  Sum_probs=24.6

Q ss_pred             CccccC--ccCcccCChHHHHHHHHhcC
Q 010863            4 NRFVCE--ICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         4 kpy~C~--~CgK~F~~~s~L~~H~r~H~   29 (498)
                      |||+|+  .|+|.|.+.++|++|+++|+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Ht   28 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHT   28 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTS
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCccc
Confidence            799996  59999999999999999998

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=1e-06  Score=56.68  Aligned_cols=30  Identities=17%  Similarity=0.400  Sum_probs=22.4

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHhhhhhhccCC
Q 010863           45 KVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGE   79 (498)
Q Consensus        45 k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htge   79 (498)
                      |||+|++-+|     +|+|...+.|++|+++|+||
T Consensus         1 kp~~C~~~gC-----gk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGC-----GKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTC-----CCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCC-----CceECcHHHcCccccccCCC
Confidence            5777877544     78888888888888888775

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=1.4e-06  Score=55.95  Aligned_cols=30  Identities=27%  Similarity=0.521  Sum_probs=21.2

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHhhhhhhccCC
Q 010863           45 KVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGE   79 (498)
Q Consensus        45 k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htge   79 (498)
                      |||.|++-+|     +|+|...+.|++|+++|+||
T Consensus         1 kp~~C~~~gC-----gk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGC-----RKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTC-----CCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCC-----CceECChhHhhhhcCcCcCC
Confidence            5677777444     77777777777777777765

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=9.4e-07  Score=55.87  Aligned_cols=26  Identities=38%  Similarity=0.760  Sum_probs=24.7

Q ss_pred             CccccCc--cCcccCChHHHHHHHHhcC
Q 010863            4 NRFVCEI--CNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         4 kpy~C~~--CgK~F~~~s~L~~H~r~H~   29 (498)
                      |||+|++  |+|.|.+.++|++|+|+|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            7999998  9999999999999999984

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.89  E-value=1.6e-06  Score=55.32  Aligned_cols=26  Identities=31%  Similarity=0.777  Sum_probs=24.8

Q ss_pred             CccccCc--cCcccCChHHHHHHHHhcC
Q 010863            4 NRFVCEI--CNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         4 kpy~C~~--CgK~F~~~s~L~~H~r~H~   29 (498)
                      |||+|++  |+|.|.+.++|++|+|+|+
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccC
Confidence            7999988  9999999999999999996

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.88  E-value=3.1e-06  Score=52.04  Aligned_cols=27  Identities=30%  Similarity=0.698  Sum_probs=25.8

Q ss_pred             CCccccCccCcccCChHHHHHHHHhcC
Q 010863            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         3 ekpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      ||||.|++||+.|.+....++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            799999999999999999999999985

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.81  E-value=3.8e-06  Score=53.49  Aligned_cols=29  Identities=24%  Similarity=0.668  Sum_probs=22.7

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHhhhhhhccC
Q 010863           45 KVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHG   78 (498)
Q Consensus        45 k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htg   78 (498)
                      |||+|++.+|     +|.|...+.|++|+++|+|
T Consensus         1 Kp~~C~~~gC-----~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESC-----DRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTC-----CCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCC-----CcEECchhHhhhhcCccCC
Confidence            5788888666     7888888888888888875

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.74  E-value=8.2e-06  Score=50.13  Aligned_cols=25  Identities=32%  Similarity=0.743  Sum_probs=19.2

Q ss_pred             CCceecC-CCCccCChHHHHHHHHHh
Q 010863          106 TREYRCD-CGTLFSRRDSFITHRAFC  130 (498)
Q Consensus       106 ekpy~C~-Cgk~F~~~s~L~~H~~~h  130 (498)
                      ||||.|+ |++.|.+++..++|.++|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            5788888 888888888888887554

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=7e-06  Score=48.95  Aligned_cols=25  Identities=40%  Similarity=0.805  Sum_probs=23.8

Q ss_pred             ccccCccCcccCChHHHHHHHHhcC
Q 010863            5 RFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         5 py~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      |++|++|+|.|.++..|+.|+|.|+
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccC
Confidence            6899999999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.69  E-value=1.1e-05  Score=52.54  Aligned_cols=29  Identities=21%  Similarity=0.513  Sum_probs=16.0

Q ss_pred             CcceeCCCCCCCCCCCCCccCChhhHhhhhhhcc
Q 010863           44 KKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKH   77 (498)
Q Consensus        44 ~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Ht   77 (498)
                      ||||.|++.+|     +|.|...+.|++|+++|+
T Consensus         1 ErP~~C~~pgC-----~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           1 DRPYSCDHPGC-----DKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CCSBCCCCTTC-----CCCBSSSHHHHHHHGGGT
T ss_pred             CcCeECcCCCC-----CCeeCCHHHHHHHhhhcc
Confidence            35555555443     555555555555555554

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=1.1e-05  Score=50.82  Aligned_cols=28  Identities=29%  Similarity=0.680  Sum_probs=16.8

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHhhhhhhcc
Q 010863           45 KVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKH   77 (498)
Q Consensus        45 k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Ht   77 (498)
                      |||+|++.+|     +|.|...+.|++|+++|+
T Consensus         1 rPf~C~~~gC-----~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGC-----NKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTC-----CCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCc-----CCcCCCHHHHHHHHhhcc
Confidence            4566666544     666666666666666653

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=3e-05  Score=48.36  Aligned_cols=27  Identities=26%  Similarity=0.765  Sum_probs=25.9

Q ss_pred             CCccccCccCcccCChHHHHHHHHhcC
Q 010863            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         3 ekpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      ||||.|++|+..|+++..+.-|+|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshd   27 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHD   27 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHS
T ss_pred             CCCcccchHHHHhhccccceEeeeccc
Confidence            799999999999999999999999996

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.37  E-value=3.5e-05  Score=49.08  Aligned_cols=32  Identities=34%  Similarity=0.651  Sum_probs=28.9

Q ss_pred             CCccccCccCcccCChHHHHHHHHhcCCCccccccccccccCcce
Q 010863            3 TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVY   47 (498)
Q Consensus         3 ekpy~C~~CgK~F~~~s~L~~H~r~H~~p~~c~~~~~~~~~~k~y   47 (498)
                      .|...|+.|||.|.+...|.+|...|.             ++|||
T Consensus         3 rk~~~ce~cgk~frdvyhlnrhklshs-------------~ekpy   34 (35)
T d2epra1           3 RKQVACEICGKIFRDVYHLNRHKLSHS-------------GEKPY   34 (35)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSC-------------SCCCC
T ss_pred             chhhhHHHHHHHHHHHHHHHhhhcccC-------------CCCCC
Confidence            356789999999999999999999998             88887

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.11  E-value=0.00011  Score=43.63  Aligned_cols=22  Identities=27%  Similarity=0.673  Sum_probs=10.7

Q ss_pred             cccCcCCccccchhHHHHHHhh
Q 010863           82 WKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        82 ~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      .+|++|+|.|.++..|+.|+|.
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~   23 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRC   23 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGG
T ss_pred             CccchhhhHhcchhHHHHHhhc
Confidence            3444455555555555554444

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.00015  Score=45.06  Aligned_cols=29  Identities=38%  Similarity=0.801  Sum_probs=23.0

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHhhhhhhccC
Q 010863           45 KVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHG   78 (498)
Q Consensus        45 k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htg   78 (498)
                      |||.|.+.+|     +|++...+.|++|++.++|
T Consensus         1 KPY~Ck~~gC-----~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGC-----TKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTT-----CCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCC-----CcccCCHHHHHHHHHhhCC
Confidence            5788888877     8888888888888887654

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.00  E-value=0.00019  Score=43.85  Aligned_cols=28  Identities=21%  Similarity=0.323  Sum_probs=25.1

Q ss_pred             ceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCc
Q 010863           46 VYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEK   80 (498)
Q Consensus        46 ~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgek   80 (498)
                      .|.|++|       +...+..+-|++|++.|++++
T Consensus         1 kYvC~~C-------g~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           1 KYICEEC-------GIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CCBCTTT-------CCBCSSHHHHHHHHHHTSSCC
T ss_pred             Ccccccc-------CcccCCHHHHHHHHHHhcCCC
Confidence            3889999       899999999999999999875

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.94  E-value=0.00022  Score=47.81  Aligned_cols=28  Identities=21%  Similarity=0.501  Sum_probs=25.3

Q ss_pred             CCCCccccCccCcccCChHHHHHHHHhc
Q 010863            1 MATNRFVCEICNKGFQRDQNLQLHRRGH   28 (498)
Q Consensus         1 ~gekpy~C~~CgK~F~~~s~L~~H~r~H   28 (498)
                      ||-|||+|.+|+|.|..+..+.+|....
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~C   28 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTSC   28 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhhh
Confidence            6889999999999999999999997543

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.91  E-value=0.00027  Score=42.63  Aligned_cols=27  Identities=22%  Similarity=0.492  Sum_probs=25.5

Q ss_pred             CCccccCccCcccCChHHHHHHHHhcC
Q 010863            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         3 ekpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      .|||+|..|+..-...+.|+.|+|+|.
T Consensus         1 vkp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           1 VKPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCCcccccccchhcchhhHhhhhhccc
Confidence            489999999999999999999999995

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.00021  Score=45.45  Aligned_cols=31  Identities=23%  Similarity=0.399  Sum_probs=24.7

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCccc
Q 010863           45 KVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEKKW   82 (498)
Q Consensus        45 k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgekp~   82 (498)
                      |...|+.|       +|.|.+...|.+|...|.+||||
T Consensus         4 k~~~ce~c-------gk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEIC-------GKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTT-------TEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHH-------HHHHHHHHHHHhhhcccCCCCCC
Confidence            45678888       78888888888888888888887

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.84  E-value=0.00026  Score=44.01  Aligned_cols=27  Identities=33%  Similarity=0.698  Sum_probs=17.6

Q ss_pred             CCceecC-CCCccCChHHHHHHHHHhhh
Q 010863          106 TREYRCD-CGTLFSRRDSFITHRAFCDA  132 (498)
Q Consensus       106 ekpy~C~-Cgk~F~~~s~L~~H~~~h~~  132 (498)
                      ||||.|. |..+|.+++.+..|.+.|.+
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            4667776 77777777777667655543

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.74  E-value=0.00035  Score=42.25  Aligned_cols=25  Identities=32%  Similarity=0.599  Sum_probs=23.4

Q ss_pred             ccccCccCcccCChHHHHHHHHhcC
Q 010863            5 RFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         5 py~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      -+.|.+|||.|...+.|++|..+|+
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvht   26 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHT   26 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTS
T ss_pred             cchHHHHhHHHHHHHHHHHHhhccc
Confidence            4689999999999999999999997

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.66  E-value=0.00049  Score=42.66  Aligned_cols=24  Identities=21%  Similarity=0.521  Sum_probs=15.9

Q ss_pred             CceecC---CCCccCChHHHHHHHHHh
Q 010863          107 REYRCD---CGTLFSRRDSFITHRAFC  130 (498)
Q Consensus       107 kpy~C~---Cgk~F~~~s~L~~H~~~h  130 (498)
                      |||.|.   |+|+|...++|++|++.+
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~   27 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTV   27 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHS
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhh
Confidence            466675   777777777777776543

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.62  E-value=0.00054  Score=41.64  Aligned_cols=29  Identities=14%  Similarity=0.299  Sum_probs=21.7

Q ss_pred             CcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCC
Q 010863           44 KKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGE   79 (498)
Q Consensus        44 ~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htge   79 (498)
                      ++||+|..|       .+.-...+.|..|++.|+|+
T Consensus         1 erpfkcqlc-------sy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQIC-------PYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSS-------SCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeec-------ccccCCchheEEeeecccCc
Confidence            467778877       67777777788888877764

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.55  E-value=0.00062  Score=41.49  Aligned_cols=25  Identities=28%  Similarity=0.586  Sum_probs=23.3

Q ss_pred             CccccCc--cCcccCChHHHHHHHHhc
Q 010863            4 NRFVCEI--CNKGFQRDQNLQLHRRGH   28 (498)
Q Consensus         4 kpy~C~~--CgK~F~~~s~L~~H~r~H   28 (498)
                      .||+|++  |+|.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            5899987  999999999999999987

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.54  E-value=0.00074  Score=40.82  Aligned_cols=27  Identities=33%  Similarity=0.509  Sum_probs=21.4

Q ss_pred             ceeCCCCCCCCCCCCCccCChhhHhhhhhhccCC
Q 010863           46 VYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGE   79 (498)
Q Consensus        46 ~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htge   79 (498)
                      .+.|.+|       +|.|...+.|++|..+|+||
T Consensus         2 ~hvc~ec-------gkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAEC-------GKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTT-------CCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHH-------hHHHHHHHHHHHHhhcccCC
Confidence            3578888       78888888888888888775

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.45  E-value=0.00088  Score=40.69  Aligned_cols=27  Identities=30%  Similarity=0.647  Sum_probs=25.9

Q ss_pred             CCccccCccCcccCChHHHHHHHHhcC
Q 010863            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         3 ekpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      |+||+|..|...-.+.+.|..|.|.|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~ht   27 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHT   27 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCC
T ss_pred             CCcceeeecccccCCchheEEeeeccc
Confidence            689999999999999999999999997

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.36  E-value=0.00095  Score=39.78  Aligned_cols=26  Identities=27%  Similarity=0.355  Sum_probs=21.2

Q ss_pred             eCCCCCCCCCCCCCccCChhhHhhhhhhccCCc
Q 010863           48 VCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEK   80 (498)
Q Consensus        48 ~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgek   80 (498)
                      +|+.|       .|.|.++.-|+.|-|.|+|||
T Consensus         2 qcp~c-------~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTC-------HKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTT-------CCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcch-------HHHHHHhHhhhhccccccCCC
Confidence            57777       788888888888888888875

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.29  E-value=0.0016  Score=39.74  Aligned_cols=25  Identities=28%  Similarity=0.646  Sum_probs=24.0

Q ss_pred             ccccCccCcccCChHHHHHHHHhcC
Q 010863            5 RFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         5 py~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      .|.|++||......+-|+.|+|.|+
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT   25 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHT   25 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTS
T ss_pred             CccccccCcccCCHHHHHHHHHHhc
Confidence            5899999999999999999999998

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.28  E-value=0.0014  Score=43.75  Aligned_cols=28  Identities=39%  Similarity=0.869  Sum_probs=22.4

Q ss_pred             hCCCceecC-CCCccCChHHHHHHHHHhh
Q 010863          104 CGTREYRCD-CGTLFSRRDSFITHRAFCD  131 (498)
Q Consensus       104 hgekpy~C~-Cgk~F~~~s~L~~H~~~h~  131 (498)
                      +|.|||.|. |+|+|..++++.+|+..+.
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~C~   29 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTSCT   29 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhhhh
Confidence            367889998 9999999999988875443

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.10  E-value=0.0015  Score=39.70  Aligned_cols=27  Identities=22%  Similarity=0.479  Sum_probs=22.8

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHhhhhhhc
Q 010863           45 KVYVCPEPNCVHHDPSRALGDLTGIKKHFCRK   76 (498)
Q Consensus        45 k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~H   76 (498)
                      .||+|+.-+|     ++.|...+.|++|.++|
T Consensus         2 ~py~c~hegc-----dk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGC-----DKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTC-----CCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCc-----cccccCHHHHhhhhhcc
Confidence            4788888877     88999999999988877

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.02  E-value=0.0021  Score=38.29  Aligned_cols=23  Identities=35%  Similarity=0.719  Sum_probs=22.2

Q ss_pred             ccCccCcccCChHHHHHHHHhcC
Q 010863            7 VCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         7 ~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      .|+.|.|.|..+..|+.|-|.|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~ht   24 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHT   24 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHS
T ss_pred             cCcchHHHHHHhHhhhhcccccc
Confidence            69999999999999999999998

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.00  E-value=0.0022  Score=39.27  Aligned_cols=24  Identities=42%  Similarity=0.660  Sum_probs=14.9

Q ss_pred             cccccCcCCccccchhHHHHHHhh
Q 010863           80 KKWKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        80 kp~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      |||.|.+|...-...++|+.|+++
T Consensus         1 kpy~cqyc~yrsadssnlkthikt   24 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             CCccccccccccccchhhhhhhhc
Confidence            456666666666666666666665

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=95.99  E-value=0.0017  Score=38.12  Aligned_cols=24  Identities=29%  Similarity=0.783  Sum_probs=22.7

Q ss_pred             cccCccCcccCChHHHHHHHHhcC
Q 010863            6 FVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         6 y~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      |+|..|.+.|-.++.|.+|+|+|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            899999999999999999999984

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.93  E-value=0.0023  Score=42.26  Aligned_cols=27  Identities=26%  Similarity=0.603  Sum_probs=25.5

Q ss_pred             CCccccCccCcccCChHHHHHHHHhcC
Q 010863            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         3 ekpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      .+.|+|.+|+|.|.+-..|--|++.|.
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr   29 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHR   29 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhc
Confidence            578999999999999999999999997

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.91  E-value=0.0023  Score=39.20  Aligned_cols=26  Identities=19%  Similarity=0.478  Sum_probs=24.3

Q ss_pred             CccccCccCcccCChHHHHHHHHhcC
Q 010863            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         4 kpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      |||.|.+|..+-.+.++|+.|+++.+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            79999999999999999999999865

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.54  E-value=0.0035  Score=40.28  Aligned_cols=33  Identities=27%  Similarity=0.432  Sum_probs=27.3

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHhhhhhhccCC
Q 010863           45 KVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGE   79 (498)
Q Consensus        45 k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htge   79 (498)
                      |.|.|.+-+|...  ++.|..+..|..|+|+|+||
T Consensus         1 k~y~C~W~~C~R~--~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           1 KEFVCHWGGCSRE--LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             SCCCCCBTTCTTT--TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCeEEECCCCCCC--CCcchhHHHHHHHHhhcCCC
Confidence            4578888888544  57799999999999999986

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.52  E-value=0.0035  Score=38.21  Aligned_cols=21  Identities=19%  Similarity=0.613  Sum_probs=8.6

Q ss_pred             cccCcCCccccchhHHHHHHh
Q 010863           82 WKCDKCSKRYAVQSDWKAHSK  102 (498)
Q Consensus        82 ~~C~~CgK~F~~~s~L~~H~r  102 (498)
                      |.|..|...|.++.+|..||+
T Consensus         2 y~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           2 YHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             EECSSSSCEESSHHHHHHHHH
T ss_pred             cccceeeeeEeeccchhHhhh
Confidence            334444444444444444443

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.46  E-value=0.0049  Score=40.51  Aligned_cols=27  Identities=22%  Similarity=0.661  Sum_probs=23.0

Q ss_pred             CCCceecC---CCCccCChHHHHHHHHHhh
Q 010863          105 GTREYRCD---CGTLFSRRDSFITHRAFCD  131 (498)
Q Consensus       105 gekpy~C~---Cgk~F~~~s~L~~H~~~h~  131 (498)
                      .+|||.|.   |+.+|.+.+.|..|++.|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            47899996   9999999999999987775

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.35  E-value=0.0038  Score=37.53  Aligned_cols=26  Identities=27%  Similarity=0.395  Sum_probs=17.2

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHhhhhhhcc
Q 010863           45 KVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKH   77 (498)
Q Consensus        45 k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Ht   77 (498)
                      |||+|..|       ++.-...+.|++|.|+|.
T Consensus         2 kp~kck~c-------dyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTC-------DYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSS-------CCEESSHHHHHHHHHHSC
T ss_pred             CCcccccc-------cchhcchhhHhhhhhccc
Confidence            56666666       666666666666666663

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.30  E-value=0.0049  Score=37.50  Aligned_cols=29  Identities=17%  Similarity=0.434  Sum_probs=22.7

Q ss_pred             CcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCC
Q 010863           44 KKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGE   79 (498)
Q Consensus        44 ~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htge   79 (498)
                      +..|.|..|       ...|+++-.|+.||..|+||
T Consensus         2 eqvftcs~c-------qe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVC-------QETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSS-------CCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHH-------HHHHHHHHhheeeeecccCC
Confidence            456788888       78888888888888888775

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.24  E-value=0.0054  Score=37.44  Aligned_cols=26  Identities=31%  Similarity=0.555  Sum_probs=15.0

Q ss_pred             cccccCcCCccccchhHHHHHHhh-hC
Q 010863           80 KKWKCDKCSKRYAVQSDWKAHSKT-CG  105 (498)
Q Consensus        80 kp~~C~~CgK~F~~~s~L~~H~r~-hg  105 (498)
                      +||+|.+|.......++|..|++. |+
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            355666665555556666666555 44

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=95.20  E-value=0.0041  Score=38.80  Aligned_cols=23  Identities=13%  Similarity=0.492  Sum_probs=11.7

Q ss_pred             ccccCcCCccccchhHHHHHHhh
Q 010863           81 KWKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        81 p~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      ||.|.+|++.|.+++-|.+|...
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qK   23 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQK   23 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTT
T ss_pred             CcccccccchhhHHHHHHHHHHH
Confidence            34555555555555555555444

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.16  E-value=0.0057  Score=36.64  Aligned_cols=23  Identities=35%  Similarity=0.635  Sum_probs=21.2

Q ss_pred             ccccCccCcccCChHHHHHHHHh
Q 010863            5 RFVCEICNKGFQRDQNLQLHRRG   27 (498)
Q Consensus         5 py~C~~CgK~F~~~s~L~~H~r~   27 (498)
                      ||+|..|||.|-++.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            79999999999999999999754

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.96  E-value=0.006  Score=37.21  Aligned_cols=30  Identities=27%  Similarity=0.615  Sum_probs=23.6

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHhhhhhhccCC
Q 010863           45 KVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGE   79 (498)
Q Consensus        45 k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htge   79 (498)
                      +||.|.+-+|     +|.|.....|.+|..+|+||
T Consensus         1 ~pfpc~~egc-----~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGC-----EKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSC-----CCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccc-----cccchhhhhhhhhhccccCC
Confidence            4677877777     78888888888888888775

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.75  E-value=0.0081  Score=36.54  Aligned_cols=24  Identities=29%  Similarity=0.650  Sum_probs=22.3

Q ss_pred             ccccCccCcccCChHHHHHHHHhc
Q 010863            5 RFVCEICNKGFQRDQNLQLHRRGH   28 (498)
Q Consensus         5 py~C~~CgK~F~~~s~L~~H~r~H   28 (498)
                      ||.|..|.-.|..+.+|..|++..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            799999999999999999999854

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.37  E-value=0.0091  Score=36.38  Aligned_cols=26  Identities=35%  Similarity=0.683  Sum_probs=23.9

Q ss_pred             CccccCc--cCcccCChHHHHHHHHhcC
Q 010863            4 NRFVCEI--CNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         4 kpy~C~~--CgK~F~~~s~L~~H~r~H~   29 (498)
                      |||.|.+  |.|.|.....|.+|..+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~tht   28 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHT   28 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHH
T ss_pred             CCcCcccccccccchhhhhhhhhhcccc
Confidence            6899976  9999999999999999986

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.24  E-value=0.009  Score=37.21  Aligned_cols=28  Identities=29%  Similarity=0.568  Sum_probs=18.0

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHhhhh-hhcc
Q 010863           45 KVYVCPEPNCVHHDPSRALGDLTGIKKHF-CRKH   77 (498)
Q Consensus        45 k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~-r~Ht   77 (498)
                      |||.|++.+|     .|.|...+...+|. |+|.
T Consensus         1 kPY~C~~~gC-----~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGC-----SKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTC-----CCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCCh-----hhhhcchhhhhhhcccccc
Confidence            4666766655     67777666666664 5554

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.12  E-value=0.013  Score=38.41  Aligned_cols=28  Identities=25%  Similarity=0.720  Sum_probs=25.0

Q ss_pred             CCCccccC--ccCcccCChHHHHHHHHhcC
Q 010863            2 ATNRFVCE--ICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         2 gekpy~C~--~CgK~F~~~s~L~~H~r~H~   29 (498)
                      .+|||.|.  -|+..|.+...|..|+..|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            48999995  59999999999999998884

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.09  E-value=0.02  Score=34.73  Aligned_cols=27  Identities=33%  Similarity=0.792  Sum_probs=25.3

Q ss_pred             CCccccCccCcccCChHHHHHHHHhcC
Q 010863            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         3 ekpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      |.-|.|..|.+.|+++-.|+.|+-.|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvsht   28 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHT   28 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeeccc
Confidence            567999999999999999999999987

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.00  E-value=0.0072  Score=37.65  Aligned_cols=21  Identities=29%  Similarity=0.743  Sum_probs=14.5

Q ss_pred             CceecC---CCCccCChHHHHHHH
Q 010863          107 REYRCD---CGTLFSRRDSFITHR  127 (498)
Q Consensus       107 kpy~C~---Cgk~F~~~s~L~~H~  127 (498)
                      |||.|.   |.|.|++.++..+|+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHq   24 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQ   24 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHH
T ss_pred             CCccccCCChhhhhcchhhhhhhc
Confidence            567775   777777777766775

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.66  E-value=0.017  Score=34.47  Aligned_cols=22  Identities=27%  Similarity=0.629  Sum_probs=14.1

Q ss_pred             ccccCcCCccccchhHHHHHHh
Q 010863           81 KWKCDKCSKRYAVQSDWKAHSK  102 (498)
Q Consensus        81 p~~C~~CgK~F~~~s~L~~H~r  102 (498)
                      ||+|..|||.|.++.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            4666666666666666666643

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=93.59  E-value=0.021  Score=33.31  Aligned_cols=22  Identities=23%  Similarity=0.688  Sum_probs=10.9

Q ss_pred             cccCcCCccccchhHHHHHHhh
Q 010863           82 WKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        82 ~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      |+|..|.+.|..++.|.+|+|.
T Consensus         1 ykcglcersfveksalsrhqrv   22 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRV   22 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGG
T ss_pred             CcccchHHHHHHHHHHHHHHHh
Confidence            3455555555555555555444

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.59  E-value=0.024  Score=33.11  Aligned_cols=23  Identities=26%  Similarity=0.615  Sum_probs=21.3

Q ss_pred             ccccCccCcccCChHHHHHHHHh
Q 010863            5 RFVCEICNKGFQRDQNLQLHRRG   27 (498)
Q Consensus         5 py~C~~CgK~F~~~s~L~~H~r~   27 (498)
                      ||+|..|...|..+..|+.|+-.
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            89999999999999999999753

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=93.56  E-value=0.017  Score=35.89  Aligned_cols=24  Identities=29%  Similarity=0.656  Sum_probs=21.6

Q ss_pred             ccccCccCcccCChHHHHHHHHhc
Q 010863            5 RFVCEICNKGFQRDQNLQLHRRGH   28 (498)
Q Consensus         5 py~C~~CgK~F~~~s~L~~H~r~H   28 (498)
                      ||.|.+|++.|.++.-|.+|...-
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKl   24 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKI   24 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTT
T ss_pred             CcccccccchhhHHHHHHHHHHHH
Confidence            799999999999999999997643

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.49  E-value=0.024  Score=37.29  Aligned_cols=30  Identities=13%  Similarity=0.328  Sum_probs=22.5

Q ss_pred             CcceeCCCCCCCCCCCCCccCChhhHhhhhhhccCCc
Q 010863           44 KKVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGEK   80 (498)
Q Consensus        44 ~k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htgek   80 (498)
                      .+.|+|.+|       +|.|.+-..|--|++.|..++
T Consensus         3 ~r~~~C~~C-------~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFC-------KREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTT-------CCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCC-------CCccCCcccccchHhhhcchH
Confidence            456788888       788888888888888776554

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.95  E-value=0.027  Score=33.75  Aligned_cols=23  Identities=30%  Similarity=0.609  Sum_probs=17.3

Q ss_pred             ccccCcCCccccchhHHHHHHhh
Q 010863           81 KWKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        81 p~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      .|.|+.|+....++++|+.|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            36777777777777777777775

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.74  E-value=0.04  Score=33.47  Aligned_cols=25  Identities=16%  Similarity=0.425  Sum_probs=22.3

Q ss_pred             CceecC-CCCccCChHHHHHHHHHhh
Q 010863          107 REYRCD-CGTLFSRRDSFITHRAFCD  131 (498)
Q Consensus       107 kpy~C~-Cgk~F~~~s~L~~H~~~h~  131 (498)
                      +||+|+ |..-..+.++|.+|++..|
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H   26 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFH   26 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHHHc
Confidence            689999 9999999999999997554

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.01  E-value=0.045  Score=31.98  Aligned_cols=23  Identities=30%  Similarity=0.647  Sum_probs=21.3

Q ss_pred             cccCccCcccCChHHHHHHHHhc
Q 010863            6 FVCEICNKGFQRDQNLQLHRRGH   28 (498)
Q Consensus         6 y~C~~CgK~F~~~s~L~~H~r~H   28 (498)
                      |.|+.|-|.|.++.++..|.++-
T Consensus         2 ypcp~cfkeftrkdnm~ahvkii   24 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKII   24 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEEe
Confidence            88999999999999999998864

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.89  E-value=0.04  Score=37.84  Aligned_cols=26  Identities=27%  Similarity=0.590  Sum_probs=23.7

Q ss_pred             CccccCccCcccCChHHHHHHHHhcC
Q 010863            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         4 kpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      --|.|-.|+|.|.....|+.|...|-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            35899999999999999999999885

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.65  E-value=0.051  Score=31.76  Aligned_cols=22  Identities=27%  Similarity=0.611  Sum_probs=12.9

Q ss_pred             cccCcCCccccchhHHHHHHhh
Q 010863           82 WKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        82 ~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      |.|+.|-|.|.++.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            4556666666666666555554

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.56  E-value=0.051  Score=31.67  Aligned_cols=21  Identities=29%  Similarity=0.812  Sum_probs=9.4

Q ss_pred             ccccCcCCccccchhHHHHHH
Q 010863           81 KWKCDKCSKRYAVQSDWKAHS  101 (498)
Q Consensus        81 p~~C~~CgK~F~~~s~L~~H~  101 (498)
                      ||+|..|...|..+.+|..|+
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            344444444444444444443

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.82  E-value=0.062  Score=34.09  Aligned_cols=22  Identities=23%  Similarity=0.670  Sum_probs=16.2

Q ss_pred             cccCcCCccccchhHHHHHHhh
Q 010863           82 WKCDKCSKRYAVQSDWKAHSKT  103 (498)
Q Consensus        82 ~~C~~CgK~F~~~s~L~~H~r~  103 (498)
                      |.|..|+|+|.++..+.+|-..
T Consensus         5 fvcskcgktftrrntm~rha~n   26 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHADN   26 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHHHH
T ss_pred             eeecccccchhcchHHHHHhhh
Confidence            6777777777777777777655

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.38  E-value=0.083  Score=31.65  Aligned_cols=25  Identities=24%  Similarity=0.421  Sum_probs=23.3

Q ss_pred             ccccCccCcccCChHHHHHHHHhcC
Q 010863            5 RFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         5 py~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      |-+|.+|......+..|+.|.|+|.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            5689999999999999999999995

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.53  E-value=0.12  Score=32.68  Aligned_cols=27  Identities=33%  Similarity=0.661  Sum_probs=23.6

Q ss_pred             ccccCccCcccCChHHHHHHHHhcCCC
Q 010863            5 RFVCEICNKGFQRDQNLQLHRRGHNLP   31 (498)
Q Consensus         5 py~C~~CgK~F~~~s~L~~H~r~H~~p   31 (498)
                      .|.|..|+|.|.++..+.+|-....++
T Consensus         4 afvcskcgktftrrntm~rha~nc~g~   30 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAGP   30 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCCC
Confidence            589999999999999999998877643

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.66  E-value=0.15  Score=30.38  Aligned_cols=25  Identities=28%  Similarity=0.667  Sum_probs=22.3

Q ss_pred             ccccCccCcccCChHHHHHHHHhcC
Q 010863            5 RFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         5 py~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      .|.|++|+....+++.|..|++.-+
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             CccCCcchhheeehhhhhHHhhhcc
Confidence            5899999999999999999988643

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=88.15  E-value=0.1  Score=32.13  Aligned_cols=30  Identities=27%  Similarity=0.609  Sum_probs=25.0

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHhhhhhhccCC
Q 010863           45 KVYVCPEPNCVHHDPSRALGDLTGIKKHFCRKHGE   79 (498)
Q Consensus        45 k~y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Htge   79 (498)
                      |.|.|...+|     +..|.....|..|+..|+||
T Consensus         2 k~~iCsf~dC-----~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADC-----GAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGG-----CCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCc-----chhhccchhhhHHhhhhcCC
Confidence            5677877766     89999999999999999886

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.93  E-value=0.21  Score=29.79  Aligned_cols=24  Identities=17%  Similarity=0.115  Sum_probs=16.7

Q ss_pred             eeCCCCCCCCCCCCCccCChhhHhhhhhhcc
Q 010863           47 YVCPEPNCVHHDPSRALGDLTGIKKHFCRKH   77 (498)
Q Consensus        47 y~C~~C~C~~~~~~k~F~~~s~Lk~H~r~Ht   77 (498)
                      -+|++|       .+....+..|+.|.|+|-
T Consensus         3 ekc~ec-------syscsskaalrvh~rihc   26 (28)
T d1x5wa1           3 EKCSEC-------SYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             EECSSS-------SCEESSHHHHHHHHGGGC
T ss_pred             ccCccc-------ccccCcHHHHHHhhcccc
Confidence            457777       677777777777777764

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=86.71  E-value=0.18  Score=31.96  Aligned_cols=28  Identities=14%  Similarity=0.447  Sum_probs=24.7

Q ss_pred             CCCccccCccCcccCChHHHHHHHHhcC
Q 010863            2 ATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (498)
Q Consensus         2 gekpy~C~~CgK~F~~~s~L~~H~r~H~   29 (498)
                      |+..|+|.+|.+.|...+++-+|..+-+
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSH   32 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhc
Confidence            4678999999999999999999977655

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.25  E-value=0.31  Score=33.28  Aligned_cols=24  Identities=21%  Similarity=0.520  Sum_probs=13.1

Q ss_pred             cccCcCCccccchhHHHHHHhhhC
Q 010863           82 WKCDKCSKRYAVQSDWKAHSKTCG  105 (498)
Q Consensus        82 ~~C~~CgK~F~~~s~L~~H~r~hg  105 (498)
                      |.|..|+|.|.....|+.|..-||
T Consensus         7 ~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           7 LPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeccccccccCCHHHHhHhHHhcC
Confidence            455555555555555555544443

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.78  E-value=0.22  Score=31.62  Aligned_cols=24  Identities=21%  Similarity=0.540  Sum_probs=16.2

Q ss_pred             CceecC---CCC---ccCChHHHHHHHHHh
Q 010863          107 REYRCD---CGT---LFSRRDSFITHRAFC  130 (498)
Q Consensus       107 kpy~C~---Cgk---~F~~~s~L~~H~~~h  130 (498)
                      |.|.|.   |.+   .|..+..|..|+|.|
T Consensus         1 k~y~C~W~~C~R~~~pf~a~YkLv~H~R~H   30 (33)
T d2glia2           1 KEFVCHWGGCSRELRPFKAQYMLVVHMRRH   30 (33)
T ss_dssp             SCCCCCBTTCTTTTCCCSSHHHHHHHTHHH
T ss_pred             CCeEEECCCCCCCCCcchhHHHHHHHHhhc
Confidence            356775   654   488888888888443