Citrus Sinensis ID: 010896
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 498 | 2.2.26 [Sep-21-2011] | |||||||
| P52410 | 473 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.889 | 0.936 | 0.753 | 0.0 | |
| P23902 | 462 | 3-oxoacyl-[acyl-carrier-p | N/A | no | 0.845 | 0.911 | 0.770 | 0.0 | |
| Q9C9P4 | 541 | 3-oxoacyl-[acyl-carrier-p | no | no | 0.841 | 0.774 | 0.529 | 1e-132 | |
| Q9KQH9 | 414 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.815 | 0.980 | 0.466 | 1e-102 | |
| Q83E37 | 414 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.817 | 0.983 | 0.450 | 1e-101 | |
| P73283 | 416 | 3-oxoacyl-[acyl-carrier-p | N/A | no | 0.823 | 0.985 | 0.444 | 1e-100 | |
| P55338 | 415 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.815 | 0.978 | 0.445 | 2e-99 | |
| O34340 | 413 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.821 | 0.990 | 0.432 | 4e-96 | |
| Q8NXE1 | 414 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.817 | 0.983 | 0.441 | 3e-94 | |
| Q6GAU2 | 414 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.817 | 0.983 | 0.441 | 3e-94 |
| >sp|P52410|KASC1_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Arabidopsis thaliana GN=KAS1 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/446 (75%), Positives = 383/446 (85%), Gaps = 3/446 (0%)
Query: 56 LICSSGPKCRTIRVMASPTAS---APKREKDPKKRIVITGMGLVSVFGSDIDKFYNKLLE 112
LI ++ P R R S +AS APKRE DPKKR+VITGMGLVSVFG+D+D +Y KLL
Sbjct: 28 LITNARPLRRQQRSFISASASTVSAPKRETDPKKRVVITGMGLVSVFGNDVDAYYEKLLS 87
Query: 113 GESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRALEEAS 172
GESGIS IDRFDAS F RFGGQIR FSS+GYIDGKN+RRLDDC +YC+VAG++ALE A+
Sbjct: 88 GESGISLIDRFDASKFPTRFGGQIRGFSSEGYIDGKNERRLDDCLKYCIVAGKKALESAN 147
Query: 173 LSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALL 232
L L +D+ + GV+VG+GMGGLT F+ GV+ LI+KG+++I+PFFIPY+ITNMGSALL
Sbjct: 148 LGGDKLNTIDKRKAGVLVGTGMGGLTVFSEGVQNLIEKGHRRISPFFIPYAITNMGSALL 207
Query: 233 AIDTGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACR 292
AID GLMGPNYSISTACAT+NYCFYAAANHIRRGE D+M+AGGTEAAIIP G+GGF+ACR
Sbjct: 208 AIDLGLMGPNYSISTACATSNYCFYAAANHIRRGEADMMIAGGTEAAIIPIGLGGFVACR 267
Query: 293 ALSQRNEYPKRASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDA 352
ALSQRN+ P+ ASRPWDK RDGFVMGEG G+LVMESLEHAMKRGA I+AEYLGGAV CDA
Sbjct: 268 ALSQRNDDPQTASRPWDKARDGFVMGEGAGVLVMESLEHAMKRGAPIVAEYLGGAVNCDA 327
Query: 353 HHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTS 412
HHMTDPR+DGLGVSSCI + LEDAGVSPEEVNY+NAHATSTLAGDLAE+NAIKKVFK TS
Sbjct: 328 HHMTDPRADGLGVSSCIERCLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKSTS 387
Query: 413 EMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQH 472
+K+N TKSMIGH LGAAGGLEAI T+KAI TGWLHP++NQ N E V DTVPN KKQH
Sbjct: 388 GIKINATKSMIGHCLGAAGGLEAIATVKAINTGWLHPSINQFNPEQAVDFDTVPNEKKQH 447
Query: 473 HVNVAISNSFGFGGHNSVVVFAPFSP 498
V+VAISNSFGFGGHNSVV F+ F P
Sbjct: 448 EVDVAISNSFGFGGHNSVVAFSAFKP 473
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Specific for elongation from C-10 to unsaturated C-16 and C-18 fatty acids. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 4EC: 1 |
| >sp|P23902|KASC1_HORVU 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Hordeum vulgare GN=KAS12 PE=1 SV=1 | Back alignment and function description |
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Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/423 (77%), Positives = 367/423 (86%), Gaps = 2/423 (0%)
Query: 78 PKREKDPKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIR 137
P+RE DP+KR+VITGMGL SVFGSD+D FY++LL GESG+ PIDRFDASSF RF GQIR
Sbjct: 40 PQRETDPRKRVVITGMGLASVFGSDVDTFYDRLLAGESGVGPIDRFDASSFPTRFAGQIR 99
Query: 138 DFSSKGYIDGKNDRRLDDCWRYCLVAGRRALEEASLSP--QVLENMDRTRIGVVVGSGMG 195
FSS+GYIDGKNDRRLDDC RYC+++G++ALE A L +D R GV+VG+GMG
Sbjct: 100 GFSSEGYIDGKNDRRLDDCIRYCILSGKKALESAGLGAGSDAHVKLDVGRAGVLVGTGMG 159
Query: 196 GLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYC 255
GL+ F+ GV+ LI+KGY+KI+PFFIPY+ITNMGSALLAID G MGPNYSISTACAT+NYC
Sbjct: 160 GLSVFSDGVQNLIEKGYRKISPFFIPYAITNMGSALLAIDVGFMGPNYSISTACATSNYC 219
Query: 256 FYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGF 315
FYAAANHIRRGE DI+VAGGTEAAIIP G+GGF+ACRALSQRN+ P A RPWDK+RDGF
Sbjct: 220 FYAAANHIRRGEADIIVAGGTEAAIIPIGLGGFVACRALSQRNDDPITACRPWDKERDGF 279
Query: 316 VMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLED 375
VMGEG G+LVMESLEHAMKR A IIAEYLGGAV CDA+HMTDPR+DGLGVSSCI SL D
Sbjct: 280 VMGEGAGVLVMESLEHAMKRDAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCITMSLRD 339
Query: 376 AGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEA 435
AGV+PEEVNY+NAHATSTLAGDLAEV AIK+VFK+ SE+K+N TKSMIGH LGAAGGLEA
Sbjct: 340 AGVAPEEVNYINAHATSTLAGDLAEVRAIKQVFKNPSEIKINSTKSMIGHCLGAAGGLEA 399
Query: 436 ITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495
I TIK+ITTGW+HPT+NQ N EPEV DTV N KKQH VNV ISNSFGFGGHNSVVVFAP
Sbjct: 400 IATIKSITTGWVHPTINQFNPEPEVDFDTVANEKKQHEVNVGISNSFGFGGHNSVVVFAP 459
Query: 496 FSP 498
F P
Sbjct: 460 FKP 462
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Specific for elongation from C-10 to unsaturated C-16 and C-18 fatty acids. Hordeum vulgare (taxid: 4513) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q9C9P4|KASC2_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic OS=Arabidopsis thaliana GN=KAS2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 470 bits (1210), Expect = e-132, Method: Compositional matrix adjust.
Identities = 225/425 (52%), Positives = 308/425 (72%), Gaps = 6/425 (1%)
Query: 75 ASAPKREKDPKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGG 134
A+ K+ ++R+V+TGMG+ + G D FY LL+G SGIS I+ FD S F R G
Sbjct: 119 AAVNKKPPTEQRRVVVTGMGVETSLGHDPHTFYENLLQGNSGISQIENFDCSEFPTRIAG 178
Query: 135 QIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGM 194
+I+ FS++G++ K +R+D Y L AG++AL + ++ +V+ D+T+ GV++GS M
Sbjct: 179 EIKSFSTEGWVAPKLSKRMDKFMLYLLTAGKKALADGGVTDEVMAEFDKTKCGVLIGSAM 238
Query: 195 GGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANY 254
GG+ F +EAL + YKK+ PF +P++ TNMGSA+LA+D G MGPNYSISTACAT+N+
Sbjct: 239 GGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNF 297
Query: 255 CFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDG 314
C +ANHI +GE D+M+ GG++A IIP G+GGF+ACRALSQRN P +ASRPWD +RDG
Sbjct: 298 CILNSANHIIKGEADVMLCGGSDAVIIPIGLGGFVACRALSQRNNDPTKASRPWDTNRDG 357
Query: 315 FVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLE 374
FVMGEG G+L++E LEHA KRGA I AE+LGG+ TCDA+HMT+P DG GV CI ++L
Sbjct: 358 FVMGEGAGVLLLEELEHAKKRGATIYAEFLGGSFTCDAYHMTEPHPDGAGVILCIERALA 417
Query: 375 DAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLE 434
AG+S E++NY+NAHATST AGD+ E A+ F E+K+N TKSMIGH LGAAG +E
Sbjct: 418 SAGISKEQINYINAHATSTHAGDIKEYQALAHCFGQNPELKVNSTKSMIGHLLGAAGAVE 477
Query: 435 AITTIKAITTGWLHPTLNQDNLEPEVTIDT---VPNVKKQHHVNVAISNSFGFGGHNSVV 491
A+ T++AI TGW+HP +N +N P+ +DT V K++ + A+SNSFGFGGHNS +
Sbjct: 478 AVATVQAIRTGWVHPNINLEN--PDSGVDTKLLVGPKKERLDIKAALSNSFGFGGHNSSI 535
Query: 492 VFAPF 496
+FAP+
Sbjct: 536 IFAPY 540
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Essential protein that catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Specific for elongation from C-16 and C-16 to unsaturated C-18 fatty acids. Confers resistance to low temperatures by maintaining chloroplast membranes integrity. Involved in the regulation of fatty acids ratios during seed metabolism. Required for embryo development, especially at the transition from the globular to the heart stage. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q9KQH9|FABF_VIBCH 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=fabF PE=3 SV=3 | Back alignment and function description |
|---|
Score = 374 bits (960), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/412 (46%), Positives = 274/412 (66%), Gaps = 6/412 (1%)
Query: 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGY 144
K+R+V+TGMG++S G+ ++ + LL G+SGI I+ FD ++FS RF G ++ F + Y
Sbjct: 3 KRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKGFDCEQY 62
Query: 145 IDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGV 204
+ K+ R++D +Y + AG +ALE++ L + + RIGV +GSG+GGL TG
Sbjct: 63 MSKKDARKMDLFIQYGIAAGIQALEDSGLE---VNEENAARIGVAIGSGIGGLELIETGH 119
Query: 205 EALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIR 264
+ALI+KG +K++PFF+P +I NM + L+I GL GPN +ISTAC T + AA I
Sbjct: 120 QALIEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIA 179
Query: 265 RGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324
G+ D MVAGG E A P G+ GF A +ALS RN+ P++ASRPWDKDRDGFV+G+G GI+
Sbjct: 180 YGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAGIM 239
Query: 325 VMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVN 384
V+E EHA RGA I AE +G ++ DA+HMT P DG G + + ++ DAGV+ E++
Sbjct: 240 VLEEYEHAKARGAKIYAEVVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIG 299
Query: 385 YVNAHATSTLAGDLAEVNAIKKVFKD--TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAI 442
YVNAH TST AGD+AEV IK+ + T ++ ++ TKSM GH LGAAG +EAI T+ ++
Sbjct: 300 YVNAHGTSTPAGDVAEVKGIKRALGEAGTKQVLVSSTKSMTGHLLGAAGSVEAIITVMSL 359
Query: 443 TTGWLHPTLNQDNLEPEVTIDTVPNV-KKQHHVNVAISNSFGFGGHNSVVVF 493
+ PT+N DN E + +D VP+V +K + A+ NSFGFGG N ++F
Sbjct: 360 VDQMVPPTINLDNPEEGLGVDLVPHVARKVESMEYAMCNSFGFGGTNGSLIF 411
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis. Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (taxid: 243277) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|Q83E37|FABF_COXBU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase I) GN=fabF PE=1 SV=1 | Back alignment and function description |
|---|
Score = 368 bits (944), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/411 (45%), Positives = 262/411 (63%), Gaps = 4/411 (0%)
Query: 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGY 144
K+R+VITG+G+VS G+ + + LL G+SG+ PI RFDASSF + ++RDF
Sbjct: 3 KRRVVITGLGVVSPLGNKVSDMWQALLAGKSGVKPITRFDASSFPTQIAAEVRDFDPALV 62
Query: 145 IDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGV 204
+D K+ R+ D ++ + + R+A E++ L + + R+GV +GSG+GG+
Sbjct: 63 LDLKSIRKTDVFVQFAMESARQAWEDSGLE---INETNAPRVGVAIGSGIGGMPWIEKNY 119
Query: 205 EALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIR 264
+AL+ G +KI+PFFIP +I NM S +++I L GPN SI TAC T + AA I
Sbjct: 120 DALLTSGPRKISPFFIPGAIINMASGMVSIKYDLKGPNISIVTACTTGLHNIGHAARMIA 179
Query: 265 RGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324
+ D M+AGGTE A P G+GGF A RALS RN+ P++ASRPWDK RDGFV+GEG +
Sbjct: 180 HNDADAMIAGGTEMASTPLGIGGFAAVRALSTRNDEPEKASRPWDKGRDGFVLGEGAACV 239
Query: 325 VMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVN 384
V+E LEHA KR A I AE +G ++ DA+HMT P + G ++C+ SL DAG++PE V+
Sbjct: 240 VVEELEHAKKRNATIYAEIIGFGMSGDAYHMTRPDPEAEGFTTCMKNSLRDAGIAPERVD 299
Query: 385 YVNAHATSTLAGDLAEVNAIKKVFKDTS-EMKMNGTKSMIGHGLGAAGGLEAITTIKAIT 443
Y+NAH TST A D E AIKK F D + ++ ++ TKSM GH LGAAG LE + ++ AI
Sbjct: 300 YINAHGTSTPAADPLEARAIKKTFGDHAYKLAVSSTKSMTGHMLGAAGALETVISVLAIR 359
Query: 444 TGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494
PT+N +N + +D VPN ++ ++ +SNSFGFGG N +V +
Sbjct: 360 DNTAPPTINLENPDEGCDLDFVPNEAREMKIDTVMSNSFGFGGTNGTLVLS 410
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis. Coxiella burnetii (strain RSA 493 / Nine Mile phase I) (taxid: 227377) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|P73283|FABF_SYNY3 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=fabF PE=1 SV=1 | Back alignment and function description |
|---|
Score = 366 bits (939), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/414 (44%), Positives = 263/414 (63%), Gaps = 4/414 (0%)
Query: 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGY 144
KKR+V+TG+G ++ G+ + ++ L+EG +GI PI RFDAS + RFGG+++DF + +
Sbjct: 6 KKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQF 65
Query: 145 IDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGV 204
+D K +R+D + + A ++A+ +A L V+ ++ IGV++G+G+GGL
Sbjct: 66 LDRKEAKRMDRFCHFAVCASQQAINDAKL---VINELNADEIGVLIGTGIGGLKVLEDQQ 122
Query: 205 EALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIR 264
L+ KG + +PF IP I NM S L AI+ G GPN TACA + A ++
Sbjct: 123 TILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQ 182
Query: 265 RGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324
G M+ GGTEAAI P GF + RALS RN+ P ASRP+DKDRDGFVMGEG GIL
Sbjct: 183 NGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGSGIL 242
Query: 325 VMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVN 384
++E LE A+ RGA I E +G A+TCDA+H+T P DG G + IA +L+D+G+ PE V+
Sbjct: 243 ILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVS 302
Query: 385 YVNAHATSTLAGDLAEVNAIKKVFKDTS-EMKMNGTKSMIGHGLGAAGGLEAITTIKAIT 443
Y+NAH TST A D+ E AIK+ + + + ++ TKSM GH LG +GG+EA+ T+ AI
Sbjct: 303 YINAHGTSTPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIA 362
Query: 444 TGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPFS 497
+ PT+N +N +PE +D VP + V+VA+SNSFGFGGHN + F +
Sbjct: 363 EDKVPPTINLENPDPECDLDYVPGQSRALIVDVALSNSFGFGGHNVTLAFKKYQ 416
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates. Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|P55338|FABF_VIBHA 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio harveyi GN=fabF PE=3 SV=2 | Back alignment and function description |
|---|
Score = 363 bits (932), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 183/411 (44%), Positives = 270/411 (65%), Gaps = 5/411 (1%)
Query: 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGY 144
K+R+V+TGMG++S G+ ++ + LLEG+SGI I+ FDA++FS RF G ++DF Y
Sbjct: 3 KRRVVVTGMGMLSPVGNTVESSWKALLEGQSGIVNIEHFDATNFSTRFAGLVKDFDCTEY 62
Query: 145 IDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGV 204
+ K+ R++D +Y + AG +AL+++ L + + R+GV +GSG+GGL G
Sbjct: 63 MSKKDARKMDLFIQYGIAAGIQALDDSGLE---ITEENAARVGVAIGSGIGGLDLIEAGH 119
Query: 205 EALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIR 264
AL++KG +K++PFF+P +I NM + L+I GL GPN +ISTAC T + AA I
Sbjct: 120 SALVEKGPRKVSPFFVPSTIVNMVAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIA 179
Query: 265 RGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324
G+ + MVAGG E A P G+ GF A +ALS RN+ P++ASRPWDK RDGFV+G+G G++
Sbjct: 180 YGDAEAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKGRDGFVLGDGAGVM 239
Query: 325 VMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVN 384
V+E EHA RGA I AE +G ++ DA+HMT P DG G + + ++ DA ++ +V
Sbjct: 240 VLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDANITGTQVG 299
Query: 385 YVNAHATSTLAGDLAEVNAIKKVFKD--TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAI 442
YVNAH TST AGD+AE+ +K+ + + ++ ++ TKSM GH LGAAG +EAI T+ ++
Sbjct: 300 YVNAHGTSTPAGDVAEIKGVKRALGEEGSKQVLVSSTKSMTGHLLGAAGSVEAIITVLSL 359
Query: 443 TTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 493
+ PT+N D+ E + ID VP+ ++ + AI NSFGFGG N +VF
Sbjct: 360 VDQIVPPTINLDDPEEGLDIDLVPHTARKVDMEYAICNSFGFGGTNGSLVF 410
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis. Vibrio harveyi (taxid: 669) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|O34340|FABF_BACSU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Bacillus subtilis (strain 168) GN=fabF PE=3 SV=1 | Back alignment and function description |
|---|
Score = 352 bits (902), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 179/414 (43%), Positives = 264/414 (63%), Gaps = 5/414 (1%)
Query: 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGY 144
KKR+V+TG+G +S G+D+D +N + G SGI PI R DA + + +++DF+ + Y
Sbjct: 3 KKRVVVTGLGALSPLGNDVDTSWNNAINGVSGIGPITRVDAEEYPAKVAAELKDFNVEDY 62
Query: 145 IDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGV 204
+D K R++D +Y +VA + A+E+A L+ + + R+GV VGSG+GGL + +
Sbjct: 63 MDKKEARKMDRFTQYAVVAAKMAVEDADLN---ITDEIAPRVGVWVGSGIGGLETLESQF 119
Query: 205 EALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIR 264
E + KG ++++PFF+P I +M + ++I G G N TACAT A I+
Sbjct: 120 EIFLTKGPRRVSPFFVPMMIPDMATGQISIALGAKGVNSCTVTACATGTNSIGDAFKVIQ 179
Query: 265 RGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324
RG+ D+MV GGTEA + GF A +ALS N PK ASRP+DK+RDGFVMGEG GI+
Sbjct: 180 RGDADVMVTGGTEAPLTRMSFAGFSANKALST-NPDPKTASRPFDKNRDGFVMGEGAGII 238
Query: 325 VMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVN 384
V+E LEHA+ RGA I E +G T DA+H+T P DG G + + ++++DAG++PEE++
Sbjct: 239 VLEELEHALARGAKIYGEIVGYGSTGDAYHITAPAQDGEGGARAMQEAIKDAGIAPEEID 298
Query: 385 YVNAHATSTLAGDLAEVNAIKKVFKDTS-EMKMNGTKSMIGHGLGAAGGLEAITTIKAIT 443
Y+NAH TST D E AIK VF + + ++ ++ TKSM GH LGAAGG+EAI +I AI
Sbjct: 299 YINAHGTSTYYNDKYETMAIKTVFGEHAHKLAVSSTKSMTGHLLGAAGGIEAIFSILAIK 358
Query: 444 TGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPFS 497
G + PT+N + E +D VP+ ++ +N +SNS GFGGHN+ ++F +
Sbjct: 359 EGVIPPTINIQTPDEECDLDYVPDEARRQELNYVLSNSLGFGGHNATLIFKKYQ 412
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Bacillus subtilis (strain 168) (taxid: 224308) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|Q8NXE1|FABF_STAAW 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MW2) GN=fabF PE=1 SV=1 | Back alignment and function description |
|---|
Score = 346 bits (887), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 182/412 (44%), Positives = 262/412 (63%), Gaps = 5/412 (1%)
Query: 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYI 145
KR+VITGMG +S G+D+ + L+G +GI I R D +SV G++++F+ + +I
Sbjct: 5 KRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHI 64
Query: 146 DGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVE 205
D K RR+D +Y +VA R A+++A L + EN RIGV +GSG+GG+ +F +
Sbjct: 65 DKKEARRMDRFTQYAIVAAREAVKDAQL--DINENT-ADRIGVWIGSGIGGMETFEIAHK 121
Query: 206 ALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRR 265
L+ KG ++++PFF+P I +M + ++ID G GPN + TACAT A ++R
Sbjct: 122 QLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQR 181
Query: 266 GETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILV 325
G+ D M+ GGTEA I + GF A RALS ++ + A RP+ + RDGFVMGEG GILV
Sbjct: 182 GDADAMITGGTEAPITHMAIAGFSASRALSTNDDI-ETACRPFQEGRDGFVMGEGAGILV 240
Query: 326 MESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNY 385
+ESLE A RGANI AE +G T DA+H+T P +G G S + +++DAG+ P++V Y
Sbjct: 241 IESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQY 300
Query: 386 VNAHATSTLAGDLAEVNAIKKVFKDTSE-MKMNGTKSMIGHGLGAAGGLEAITTIKAITT 444
+NAH TST GDL EV AIK F + ++ +K++ TKSM GH LGA GG+EAI + +I
Sbjct: 301 LNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKD 360
Query: 445 GWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496
+ PT++ +PE +D VPN + + A+SNS GFGGHN+V+VF F
Sbjct: 361 SKVAPTIHAVTPDPECDLDIVPNEAQDLDITYAMSNSLGFGGHNAVLVFKKF 412
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Staphylococcus aureus (strain MW2) (taxid: 196620) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|Q6GAU2|FABF_STAAS 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MSSA476) GN=fabF PE=3 SV=1 | Back alignment and function description |
|---|
Score = 346 bits (887), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 182/412 (44%), Positives = 262/412 (63%), Gaps = 5/412 (1%)
Query: 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYI 145
KR+VITGMG +S G+D+ + L+G +GI I R D +SV G++++F+ + +I
Sbjct: 5 KRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHI 64
Query: 146 DGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVE 205
D K RR+D +Y +VA R A+++A L + EN RIGV +GSG+GG+ +F +
Sbjct: 65 DKKEARRMDRFTQYAIVAAREAVKDAQL--DINENT-ADRIGVWIGSGIGGMETFEIAHK 121
Query: 206 ALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRR 265
L+ KG ++++PFF+P I +M + ++ID G GPN + TACAT A ++R
Sbjct: 122 QLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQR 181
Query: 266 GETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILV 325
G+ D M+ GGTEA I + GF A RALS ++ + A RP+ + RDGFVMGEG GILV
Sbjct: 182 GDADAMITGGTEAPITHMAIAGFSASRALSTNDDI-ETACRPFQEGRDGFVMGEGAGILV 240
Query: 326 MESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNY 385
+ESLE A RGANI AE +G T DA+H+T P +G G S + +++DAG+ P++V Y
Sbjct: 241 IESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQY 300
Query: 386 VNAHATSTLAGDLAEVNAIKKVFKDTSE-MKMNGTKSMIGHGLGAAGGLEAITTIKAITT 444
+NAH TST GDL EV AIK F + ++ +K++ TKSM GH LGA GG+EAI + +I
Sbjct: 301 LNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKD 360
Query: 445 GWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496
+ PT++ +PE +D VPN + + A+SNS GFGGHN+V+VF F
Sbjct: 361 SKVAPTIHAVTPDPECDLDIVPNEAQDLDITYAMSNSLGFGGHNAVLVFKKF 412
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Staphylococcus aureus (strain MSSA476) (taxid: 282459) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 498 | ||||||
| 224058150 | 495 | predicted protein [Populus trichocarpa] | 0.987 | 0.993 | 0.829 | 0.0 | |
| 297742360 | 488 | unnamed protein product [Vitis vinifera] | 0.979 | 1.0 | 0.843 | 0.0 | |
| 255555627 | 485 | 3-oxoacyl-[acyl-carrier-protein] synthas | 0.967 | 0.993 | 0.836 | 0.0 | |
| 225426280 | 453 | PREDICTED: 3-oxoacyl-[acyl-carrier-prote | 0.899 | 0.988 | 0.890 | 0.0 | |
| 356523620 | 491 | PREDICTED: 3-oxoacyl-[acyl-carrier-prote | 0.967 | 0.981 | 0.809 | 0.0 | |
| 363807662 | 490 | uncharacterized protein LOC100808453 [Gl | 0.983 | 1.0 | 0.803 | 0.0 | |
| 224072224 | 429 | predicted protein [Populus trichocarpa] | 0.861 | 1.0 | 0.899 | 0.0 | |
| 3599489 | 488 | 3-oxoacyl-[acyl-carrier-protein] synthas | 0.979 | 1.0 | 0.761 | 0.0 | |
| 325301617 | 488 | 3-oxoacyl-(acyl-carrier-protein) synthas | 0.957 | 0.977 | 0.765 | 0.0 | |
| 294462592 | 481 | unknown [Picea sitchensis] | 0.851 | 0.881 | 0.825 | 0.0 |
| >gi|224058150|ref|XP_002299456.1| predicted protein [Populus trichocarpa] gi|222846714|gb|EEE84261.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/499 (82%), Positives = 450/499 (90%), Gaps = 7/499 (1%)
Query: 1 MASFVSTASALGVVFGNKQVKSNGAASLAQYSGLRPAENFQFASAGITTTIKQSGLICSS 60
MA A + V+FG+++V S+GA SLAQY GLRP EN Q A G + SG I +S
Sbjct: 1 MAGIAGAACSSNVLFGSREVGSDGA-SLAQYRGLRPVENMQLAPTGR----RPSGSISTS 55
Query: 61 G--PKCRTIRVMASPTASAPKREKDPKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGIS 118
G K RTIR M S T SAPKREKDPKKR+VITGMGLVSVFGS ID FY+KLLEGESGIS
Sbjct: 56 GMTSKSRTIRAMVSQTVSAPKREKDPKKRVVITGMGLVSVFGSGIDTFYDKLLEGESGIS 115
Query: 119 PIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVL 178
IDRFDASSFSVRF GQIRDFSSKGYIDGKNDRRLDDCWRYCLVAG+RALE+A+L +VL
Sbjct: 116 LIDRFDASSFSVRFAGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGKRALEDANLGSEVL 175
Query: 179 ENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGL 238
ENMDRTRIGV+VG+GMGGLT+F+ GVE+L+QKGYKK++PFFIPYSITNMGSALLAIDTGL
Sbjct: 176 ENMDRTRIGVLVGTGMGGLTAFSNGVESLVQKGYKKMSPFFIPYSITNMGSALLAIDTGL 235
Query: 239 MGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRN 298
MGPNYSISTACATANYCFY+AANHIRRGE DIMVAGGTEA++IP GVGGFIACRALSQRN
Sbjct: 236 MGPNYSISTACATANYCFYSAANHIRRGEADIMVAGGTEASVIPAGVGGFIACRALSQRN 295
Query: 299 EYPKRASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDP 358
E PK+ASRPWDKDRDGFVMGEG G+L+MESL+HAMKRGANIIAEYLGGAVTCDAHHMTDP
Sbjct: 296 EDPKKASRPWDKDRDGFVMGEGSGVLIMESLDHAMKRGANIIAEYLGGAVTCDAHHMTDP 355
Query: 359 RSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNG 418
RSDGLGVS+CIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFK+TSE+KMNG
Sbjct: 356 RSDGLGVSTCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKNTSEIKMNG 415
Query: 419 TKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAI 478
TKSMIGHGLGAAG LEAI TIKAI TGWLHPT+NQDN+E +VTIDTVPNVKKQH VNV I
Sbjct: 416 TKSMIGHGLGAAGALEAIATIKAINTGWLHPTINQDNIELDVTIDTVPNVKKQHEVNVGI 475
Query: 479 SNSFGFGGHNSVVVFAPFS 497
SNSFGFGGHNSVVVFAPF+
Sbjct: 476 SNSFGFGGHNSVVVFAPFT 494
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297742360|emb|CBI34509.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 834 bits (2155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/498 (84%), Positives = 451/498 (90%), Gaps = 10/498 (2%)
Query: 1 MASFVSTASALGVVFGNKQVKSNGAASLAQYSGLRPAENFQFASAGITTTIKQSGLICSS 60
MA+F S+ GV F K+ + SLAQY GLRP E+ + ASA ++ SG I S
Sbjct: 1 MAAFAGICSS-GVRFRGKE-----SGSLAQYHGLRPVESKKMASA----MVRPSGSISSP 50
Query: 61 GPKCRTIRVMASPTASAPKREKDPKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPI 120
KCRTIR +ASPT SAPKREKDPKKRIVITGMGLVSVFGSDID FY+KLL+G SGIS I
Sbjct: 51 ARKCRTIRAVASPTVSAPKREKDPKKRIVITGMGLVSVFGSDIDTFYDKLLQGVSGISLI 110
Query: 121 DRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLEN 180
DRFDAS+FSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRAL+ ASL +VLE
Sbjct: 111 DRFDASNFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRALDNASLGTEVLET 170
Query: 181 MDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMG 240
MDR+RIGV+VGSGMGGLT+F+ GVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMG
Sbjct: 171 MDRSRIGVLVGSGMGGLTAFSNGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMG 230
Query: 241 PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEY 300
PNYSISTACATANYCFYAAANHIRRGE DIMVAGGTEAAI+ TGVGGFIACRALSQRNE
Sbjct: 231 PNYSISTACATANYCFYAAANHIRRGEADIMVAGGTEAAIMATGVGGFIACRALSQRNED 290
Query: 301 PKRASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRS 360
P++ASRPWDKDRDGFVMGEG G+L+MESLEHAMKRGANIIAEYLGGA+TCDAHHMTDPRS
Sbjct: 291 PQKASRPWDKDRDGFVMGEGSGVLIMESLEHAMKRGANIIAEYLGGAITCDAHHMTDPRS 350
Query: 361 DGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTK 420
DGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSE+KMNGTK
Sbjct: 351 DGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEIKMNGTK 410
Query: 421 SMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISN 480
SMIGHGLGAAGGLEAI TIKAITTGW+HPT+NQ NLEP+VTIDTVPNVKK+H V+V ISN
Sbjct: 411 SMIGHGLGAAGGLEAIATIKAITTGWIHPTINQYNLEPDVTIDTVPNVKKKHEVHVGISN 470
Query: 481 SFGFGGHNSVVVFAPFSP 498
SFGFGGHNSVVVFAPF+P
Sbjct: 471 SFGFGGHNSVVVFAPFNP 488
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255555627|ref|XP_002518849.1| 3-oxoacyl-[acyl-carrier-protein] synthase, putative [Ricinus communis] gi|223541836|gb|EEF43382.1| 3-oxoacyl-[acyl-carrier-protein] synthase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/489 (83%), Positives = 441/489 (90%), Gaps = 7/489 (1%)
Query: 8 ASALGVVFGNKQVKSNGAASLAQYSGLRPAENFQFASAGITTTIKQSGLICSSGPKCRTI 67
AS G N NGA SL Q++GLRP EN Q A+ K +G + + PK I
Sbjct: 2 ASIAGTCSSNVLCMKNGA-SLGQFNGLRPVENMQMAAT------KPTGFLFTLAPKSGII 54
Query: 68 RVMASPTASAPKREKDPKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASS 127
+ MASP SAPKRE+DPKKR+VITGMGLVSVFGSDID FYNKLLEGESGIS IDRFDAS
Sbjct: 55 KAMASPNISAPKRERDPKKRVVITGMGLVSVFGSDIDTFYNKLLEGESGISLIDRFDASG 114
Query: 128 FSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIG 187
FSVRF GQIRDFSSKGYIDGKNDRRLDDCWRYCLVAG+RAL++A+L QVLE+MDRT+IG
Sbjct: 115 FSVRFAGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGKRALDDANLGSQVLEDMDRTKIG 174
Query: 188 VVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSIST 247
V++G+GMGGLT+F+ GVEAL+QKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSIST
Sbjct: 175 VLIGTGMGGLTAFSNGVEALVQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSIST 234
Query: 248 ACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRP 307
ACATANYCFYAAANHIRRGE DIMV GGTEAA++PTGVGGFIACRALSQRNE PKRASRP
Sbjct: 235 ACATANYCFYAAANHIRRGEADIMVVGGTEAAVMPTGVGGFIACRALSQRNEDPKRASRP 294
Query: 308 WDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSS 367
WDK+RDGFVMGEG G+L+MESL+HAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVS+
Sbjct: 295 WDKNRDGFVMGEGAGVLIMESLDHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVST 354
Query: 368 CIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGL 427
CI++SLEDA VSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGL
Sbjct: 355 CISRSLEDAKVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGL 414
Query: 428 GAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGH 487
GAAGGLEAI TIKAITTGWLHPT+NQDNLEP+VTIDTVPNVKKQH VNVAISNSFGFGGH
Sbjct: 415 GAAGGLEAIATIKAITTGWLHPTINQDNLEPDVTIDTVPNVKKQHEVNVAISNSFGFGGH 474
Query: 488 NSVVVFAPF 496
NSVVVFAPF
Sbjct: 475 NSVVVFAPF 483
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|225426280|ref|XP_002265207.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/448 (89%), Positives = 424/448 (94%)
Query: 51 IKQSGLICSSGPKCRTIRVMASPTASAPKREKDPKKRIVITGMGLVSVFGSDIDKFYNKL 110
++ SG I S KCRTIR +ASPT SAPKREKDPKKRIVITGMGLVSVFGSDID FY+KL
Sbjct: 6 VRPSGSISSPARKCRTIRAVASPTVSAPKREKDPKKRIVITGMGLVSVFGSDIDTFYDKL 65
Query: 111 LEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRALEE 170
L+G SGIS IDRFDAS+FSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRAL+
Sbjct: 66 LQGVSGISLIDRFDASNFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRALDN 125
Query: 171 ASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSA 230
ASL +VLE MDR+RIGV+VGSGMGGLT+F+ GVEALIQKGYKKITPFFIPYSITNMGSA
Sbjct: 126 ASLGTEVLETMDRSRIGVLVGSGMGGLTAFSNGVEALIQKGYKKITPFFIPYSITNMGSA 185
Query: 231 LLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIA 290
LLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGE DIMVAGGTEAAI+ TGVGGFIA
Sbjct: 186 LLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMVAGGTEAAIMATGVGGFIA 245
Query: 291 CRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTC 350
CRALSQRNE P++ASRPWDKDRDGFVMGEG G+L+MESLEHAMKRGANIIAEYLGGA+TC
Sbjct: 246 CRALSQRNEDPQKASRPWDKDRDGFVMGEGSGVLIMESLEHAMKRGANIIAEYLGGAITC 305
Query: 351 DAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD 410
DAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD
Sbjct: 306 DAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD 365
Query: 411 TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKK 470
TSE+KMNGTKSMIGHGLGAAGGLEAI TIKAITTGW+HPT+NQ NLEP+VTIDTVPNVKK
Sbjct: 366 TSEIKMNGTKSMIGHGLGAAGGLEAIATIKAITTGWIHPTINQYNLEPDVTIDTVPNVKK 425
Query: 471 QHHVNVAISNSFGFGGHNSVVVFAPFSP 498
+H V+V ISNSFGFGGHNSVVVFAPF+P
Sbjct: 426 KHEVHVGISNSFGFGGHNSVVVFAPFNP 453
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|356523620|ref|XP_003530435.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 800 bits (2065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/488 (80%), Positives = 433/488 (88%), Gaps = 6/488 (1%)
Query: 11 LGVVFGNKQVKSNGAASLAQYSGLRPAENFQFASAGITTTIKQSGLICSSGPKCRTIRVM 70
LG + N ++NG S+ Y GLR + Q S + I S SS P+CRTI+ M
Sbjct: 10 LGALLRNSVSENNGKISVVHYEGLRLQQRMQMPSP--SQYISAS----SSAPRCRTIKAM 63
Query: 71 ASPTASAPKREKDPKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSV 130
ASPT APKREKDPKKR+VITGMGLVSVFGSD+D FYNKLLEGESGIS IDRFDAS+FSV
Sbjct: 64 ASPTVGAPKREKDPKKRVVITGMGLVSVFGSDVDAFYNKLLEGESGISLIDRFDASNFSV 123
Query: 131 RFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVV 190
RFGGQIRDFSS+GYIDGKNDRRLD+CWRYC+VAG+RAL++A+L QVL+ MD+TRIGV+V
Sbjct: 124 RFGGQIRDFSSEGYIDGKNDRRLDNCWRYCIVAGKRALDDANLGKQVLDTMDKTRIGVLV 183
Query: 191 GSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACA 250
GSGMGG+T+F+ GVEAL+QKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACA
Sbjct: 184 GSGMGGITAFSNGVEALVQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACA 243
Query: 251 TANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDK 310
TANYCF AAANHIR+GE DIMV GGTEAAI+P+G+GGFIACRALS RNE PK+ASRPWDK
Sbjct: 244 TANYCFCAAANHIRKGEADIMVVGGTEAAIMPSGLGGFIACRALSHRNEDPKKASRPWDK 303
Query: 311 DRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIA 370
DRDGFVMGEG G+LVMESLE A KRGA IIAEYLGGA+TCDAHHMTDPR+DGLGVSSCI+
Sbjct: 304 DRDGFVMGEGSGVLVMESLESATKRGAKIIAEYLGGAITCDAHHMTDPRADGLGVSSCIS 363
Query: 371 KSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAA 430
KSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSE+KMN TKSMIGHGLGAA
Sbjct: 364 KSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSELKMNATKSMIGHGLGAA 423
Query: 431 GGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSV 490
GGLEAI TIKAITTGWLHP++N DNLE VTIDTVPNVKK+H VNV ISNSFGFGGHNSV
Sbjct: 424 GGLEAIATIKAITTGWLHPSINLDNLEASVTIDTVPNVKKKHEVNVGISNSFGFGGHNSV 483
Query: 491 VVFAPFSP 498
VVFAPF P
Sbjct: 484 VVFAPFRP 491
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|363807662|ref|NP_001241906.1| uncharacterized protein LOC100808453 [Glycine max] gi|255638999|gb|ACU19800.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/498 (80%), Positives = 438/498 (87%), Gaps = 8/498 (1%)
Query: 1 MASFVSTASALGVVFGNKQVKSNGAASLAQYSGLRPAENFQFASAGITTTIKQSGLICSS 60
MAS T LG + N ++NG S+ Y GLR + Q S + I S SS
Sbjct: 1 MASIAGTC-PLGALLRNIS-ENNGKISVVHYEGLRLQQRLQMHSP--SHYISAS----SS 52
Query: 61 GPKCRTIRVMASPTASAPKREKDPKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPI 120
P+CRTI+VMASPT +APKREKDPKKR+VITGMGLVSVFGSDID FYNKLLEGESGIS I
Sbjct: 53 APRCRTIKVMASPTVAAPKREKDPKKRVVITGMGLVSVFGSDIDGFYNKLLEGESGISLI 112
Query: 121 DRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLEN 180
DRFDAS+F VRFGGQIRDFSS+GYIDG NDRRLDDCWRYC+VAG+RAL++A+L QVL+
Sbjct: 113 DRFDASNFPVRFGGQIRDFSSEGYIDGMNDRRLDDCWRYCIVAGKRALDDANLGQQVLDT 172
Query: 181 MDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMG 240
MD+TR+GV+VGSGMGG+T+F+TGVEAL+QKGYKKITPFFIPYSITNMGSALLAIDTGLMG
Sbjct: 173 MDKTRVGVLVGSGMGGITAFSTGVEALVQKGYKKITPFFIPYSITNMGSALLAIDTGLMG 232
Query: 241 PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEY 300
PNYSISTACATANYCF +AANHIR+GE DIMV GGTEAAI+P+G+GGFIACRALS RNE
Sbjct: 233 PNYSISTACATANYCFCSAANHIRKGEADIMVVGGTEAAIMPSGLGGFIACRALSHRNEG 292
Query: 301 PKRASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRS 360
PK+ASRPWDKDRDGFVMGEG G+LVMESLE A KRGA IIAEYLGGA+TCD HHMTDPR+
Sbjct: 293 PKKASRPWDKDRDGFVMGEGSGVLVMESLESATKRGARIIAEYLGGAITCDDHHMTDPRA 352
Query: 361 DGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTK 420
DGLGVSSCI+KSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSE+KMN TK
Sbjct: 353 DGLGVSSCISKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSELKMNATK 412
Query: 421 SMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISN 480
SMIGHGLGAAGGLEAI TIKAITTGWLHPT+NQDNLE VTIDTVPNVKK+H VNV ISN
Sbjct: 413 SMIGHGLGAAGGLEAIATIKAITTGWLHPTINQDNLEASVTIDTVPNVKKKHEVNVGISN 472
Query: 481 SFGFGGHNSVVVFAPFSP 498
SFGFGGHNSVVVFAPF P
Sbjct: 473 SFGFGGHNSVVVFAPFRP 490
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224072224|ref|XP_002303661.1| predicted protein [Populus trichocarpa] gi|222841093|gb|EEE78640.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/429 (89%), Positives = 411/429 (95%)
Query: 70 MASPTASAPKREKDPKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFS 129
M S T SAPKREKDPKKR+VITGMGLVSVFGSDID FYNKLLEGESGIS IDRFDASSFS
Sbjct: 1 MVSQTVSAPKREKDPKKRVVITGMGLVSVFGSDIDTFYNKLLEGESGISLIDRFDASSFS 60
Query: 130 VRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVV 189
VRF GQIRDFSSKGYIDGKNDRRLDDCWRYCLVAG+RAL +A+L ++LENMDRTRIGV+
Sbjct: 61 VRFAGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGKRALVDANLGSELLENMDRTRIGVL 120
Query: 190 VGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTAC 249
VG+GMGGLT+F+ GVE+L+QKGYKKI+PFFIPYSITNMGSALLAIDTGLMGPNYSISTAC
Sbjct: 121 VGTGMGGLTAFSNGVESLVQKGYKKISPFFIPYSITNMGSALLAIDTGLMGPNYSISTAC 180
Query: 250 ATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWD 309
ATANYCFYAAANHIRRGE DIMVAGGTEAA++PTGVGGFIACRALSQRNE PK+ASRPWD
Sbjct: 181 ATANYCFYAAANHIRRGEADIMVAGGTEAAVMPTGVGGFIACRALSQRNEDPKKASRPWD 240
Query: 310 KDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCI 369
KDRDGFVMGEG G+L+MESLEHAMKRGANIIAEYLGGA TCDAHHMT+PRSDGLGVS+CI
Sbjct: 241 KDRDGFVMGEGSGVLIMESLEHAMKRGANIIAEYLGGAATCDAHHMTNPRSDGLGVSTCI 300
Query: 370 AKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGA 429
AKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSE+KMNGTKSMIGHGLGA
Sbjct: 301 AKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEIKMNGTKSMIGHGLGA 360
Query: 430 AGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNS 489
AGGLEAI TIKAI TGWLHPT+NQDN+E +VTIDTVPNVKKQH VNVAISNSFGFGGHNS
Sbjct: 361 AGGLEAIATIKAINTGWLHPTINQDNIELDVTIDTVPNVKKQHEVNVAISNSFGFGGHNS 420
Query: 490 VVVFAPFSP 498
VVVFAPF+P
Sbjct: 421 VVVFAPFTP 429
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|3599489|gb|AAC78479.1| 3-oxoacyl-[acyl-carrier-protein] synthase [Capsicum chinense] | Back alignment and taxonomy information |
|---|
Score = 779 bits (2012), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/498 (76%), Positives = 424/498 (85%), Gaps = 10/498 (2%)
Query: 1 MASFVSTASALGVVFGNKQVKSNGAASLAQYSGLRPAENFQFASAGITTTIKQSGLICSS 60
M+S S+ + ++ K+ + NG L QY+GLR E+ Q ++ + K
Sbjct: 1 MSSITSSCYS-NLILKKKESRINGGFHL-QYNGLRAIESVQMPASSVAYKPKVV------ 52
Query: 61 GPKCRTIRVMASPTASAPKREKDPKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPI 120
K IRVMASP SAPKRE DPKKRIVITGMGLVSVFGSDID FYNKLLEG+SGIS I
Sbjct: 53 --KWGRIRVMASPAVSAPKRETDPKKRIVITGMGLVSVFGSDIDNFYNKLLEGQSGISLI 110
Query: 121 DRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLEN 180
DRFDASS++VRF GQIRDFSS+GYIDGKNDRRLDDCWRYCLVAG+RALE+A+L QVL+
Sbjct: 111 DRFDASSYTVRFAGQIRDFSSEGYIDGKNDRRLDDCWRYCLVAGKRALEDANLGQQVLDT 170
Query: 181 MDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMG 240
MD+TRIGV+VGS MGG F VEAL+Q+GYKKI PFFIPYSITNMGSALLAIDTGLMG
Sbjct: 171 MDKTRIGVLVGSSMGGSKVFADAVEALVQRGYKKINPFFIPYSITNMGSALLAIDTGLMG 230
Query: 241 PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEY 300
P YSISTACATANYCFYA+ANHIRRGE DIMVAGGT+A I GVGG IACRALSQRN+
Sbjct: 231 PTYSISTACATANYCFYASANHIRRGEADIMVAGGTDAFISAIGVGGLIACRALSQRNDE 290
Query: 301 PKRASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRS 360
++ASRPWD++RDGFV+GEG G+LVME+LEHA+KRGA IIAEYLGGA+TCDAHH+TDPR+
Sbjct: 291 YEKASRPWDRNRDGFVIGEGSGVLVMENLEHALKRGAPIIAEYLGGAITCDAHHITDPRA 350
Query: 361 DGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTK 420
DGLGVSSCI SL DAGVSPEEVNY+NAHATSTLAGDLAEVNAIKKVFKDTSE+KMNGTK
Sbjct: 351 DGLGVSSCIVMSLVDAGVSPEEVNYINAHATSTLAGDLAEVNAIKKVFKDTSEIKMNGTK 410
Query: 421 SMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISN 480
SMIGHGLGA+GGLEAI TIKAITTGWLHPT+NQ +LEP+VTIDTVPNVKKQH VNV ISN
Sbjct: 411 SMIGHGLGASGGLEAIATIKAITTGWLHPTINQYDLEPQVTIDTVPNVKKQHEVNVGISN 470
Query: 481 SFGFGGHNSVVVFAPFSP 498
SFGFGGHNSVVVFAP+ P
Sbjct: 471 SFGFGGHNSVVVFAPYKP 488
|
Source: Capsicum chinense Species: Capsicum chinense Genus: Capsicum Family: Solanaceae Order: Solanales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|325301617|gb|ADZ05697.1| 3-oxoacyl-(acyl-carrier-protein) synthase [Capsicum annuum] | Back alignment and taxonomy information |
|---|
Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/486 (76%), Positives = 417/486 (85%), Gaps = 9/486 (1%)
Query: 13 VVFGNKQVKSNGAASLAQYSGLRPAENFQFASAGITTTIKQSGLICSSGPKCRTIRVMAS 72
++ K+ + NG +L QY+ + E Q ++ + K KC +R MAS
Sbjct: 12 LILKKKESRINGGFNL-QYNEPKAIETVQMPASSVAYKPK--------AVKCGRVRAMAS 62
Query: 73 PTASAPKREKDPKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRF 132
P SAPKR DPKKRIVITGMGLVSVFGSDIDKFYNKLLEG+ GI+ IDRFDASS++VRF
Sbjct: 63 PAVSAPKRATDPKKRIVITGMGLVSVFGSDIDKFYNKLLEGQRGITLIDRFDASSYAVRF 122
Query: 133 GGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGS 192
GQIRDFSS+GYIDGKNDR LDDCW+YCLVAG+RALE+A+L QVL+ MD+TRIGV+VGS
Sbjct: 123 AGQIRDFSSEGYIDGKNDRHLDDCWKYCLVAGKRALEDANLGQQVLDTMDKTRIGVLVGS 182
Query: 193 GMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATA 252
GMGG FT VEAL+Q+GYKKI+PFF+PY+ITNMGSALLAI+TGLMGP YSISTACATA
Sbjct: 183 GMGGSKVFTDAVEALVQRGYKKISPFFVPYTITNMGSALLAINTGLMGPCYSISTACATA 242
Query: 253 NYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDR 312
NYCFYAAANHIRRGE DIMVAGGTEA I GVGGFIACRALSQRN+ ++ASRPWDK+R
Sbjct: 243 NYCFYAAANHIRRGEADIMVAGGTEAFISAIGVGGFIACRALSQRNDEYEKASRPWDKNR 302
Query: 313 DGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKS 372
DGFV+GEG G+LVMESLEHA+KRG+ IIAEYLGGAVTCDAHHMTDPR+DGLGVSSC+ S
Sbjct: 303 DGFVIGEGSGVLVMESLEHALKRGSPIIAEYLGGAVTCDAHHMTDPRADGLGVSSCMVMS 362
Query: 373 LEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGG 432
L DAGVSPEEVNY+NAHATSTLAGDLAEVNAIKKVFKDTSE+KMNGTKSMIGHGLGAAGG
Sbjct: 363 LVDAGVSPEEVNYINAHATSTLAGDLAEVNAIKKVFKDTSEIKMNGTKSMIGHGLGAAGG 422
Query: 433 LEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVV 492
LEAI TIKAIT GWLHPT+NQ +LEP+VTIDTVPNVKKQH VNV ISNSFGFGGHNSVVV
Sbjct: 423 LEAIATIKAITAGWLHPTINQHDLEPQVTIDTVPNVKKQHEVNVGISNSFGFGGHNSVVV 482
Query: 493 FAPFSP 498
FAP+ P
Sbjct: 483 FAPYKP 488
|
Source: Capsicum annuum Species: Capsicum annuum Genus: Capsicum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|294462592|gb|ADE76842.1| unknown [Picea sitchensis] | Back alignment and taxonomy information |
|---|
Score = 744 bits (1920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/424 (82%), Positives = 384/424 (90%)
Query: 75 ASAPKREKDPKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGG 134
AS PKREKDPKKRIVITGMGLVSVFGSD+D FY+KLLEG+SGI IDRFDASS+SVRF G
Sbjct: 58 ASVPKREKDPKKRIVITGMGLVSVFGSDVDSFYDKLLEGQSGIGFIDRFDASSYSVRFAG 117
Query: 135 QIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGM 194
QIR FS+ GYIDGKNDRRLDDCWRYCLV+G+ ALE A L + LE +D++RIGV+VGSG+
Sbjct: 118 QIRGFSANGYIDGKNDRRLDDCWRYCLVSGKMALENADLGKEKLEKLDKSRIGVLVGSGI 177
Query: 195 GGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANY 254
GGLT+++ G++AL+QKGYK+ITPFFIPY+I+NMGSALLAIDTGLMGPNYSISTACATANY
Sbjct: 178 GGLTAYSDGIKALLQKGYKRITPFFIPYTISNMGSALLAIDTGLMGPNYSISTACATANY 237
Query: 255 CFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDG 314
C YAAANHIRRGE DIM+AGGTEA I+P VGGFIA RALS RN+ P+ ASRPWDKDRDG
Sbjct: 238 CLYAAANHIRRGEADIMLAGGTEAGIVPVSVGGFIALRALSHRNDDPQTASRPWDKDRDG 297
Query: 315 FVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLE 374
FVMGEG G+LVMESLEHAMKRGA IIAEYLGGAVTCDAHHMTDPRSDGLGVS CI KSLE
Sbjct: 298 FVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVTCDAHHMTDPRSDGLGVSMCIRKSLE 357
Query: 375 DAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLE 434
DAGVSPEEVNY+NAHATST AGDLAEVNAIKKVF +TS +KMNGTKSMIGH GAAG LE
Sbjct: 358 DAGVSPEEVNYINAHATSTRAGDLAEVNAIKKVFTNTSSIKMNGTKSMIGHSFGAAGALE 417
Query: 435 AITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494
AI TIKAITTGWLHPT+NQ N EP+VTIDTVPNVKKQH V+V ISNSFGFGGHNSVV FA
Sbjct: 418 AIATIKAITTGWLHPTINQFNTEPDVTIDTVPNVKKQHEVHVGISNSFGFGGHNSVVTFA 477
Query: 495 PFSP 498
PF+P
Sbjct: 478 PFNP 481
|
Source: Picea sitchensis Species: Picea sitchensis Genus: Picea Family: Pinaceae Order: Coniferales Class: Coniferopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 498 | ||||||
| TAIR|locus:2027252 | 541 | FAB1 "fatty acid biosynthesis | 0.841 | 0.774 | 0.512 | 1.5e-120 | |
| UNIPROTKB|Q9KQH9 | 414 | fabF "3-oxoacyl-[acyl-carrier- | 0.815 | 0.980 | 0.453 | 8.1e-92 | |
| TIGR_CMR|VC_2019 | 414 | VC_2019 "3-oxoacyl-(acyl-carri | 0.815 | 0.980 | 0.453 | 8.1e-92 | |
| TIGR_CMR|CBU_0497 | 414 | CBU_0497 "3-oxoacyl-acyl carri | 0.817 | 0.983 | 0.430 | 2e-88 | |
| UNIPROTKB|P0AAI5 | 413 | fabF "FabF" [Escherichia coli | 0.815 | 0.983 | 0.433 | 1.4e-87 | |
| TIGR_CMR|SO_2774 | 412 | SO_2774 "3-oxoacyl-(acyl-carri | 0.815 | 0.985 | 0.424 | 3.7e-87 | |
| TIGR_CMR|GSU_1605 | 410 | GSU_1605 "3-oxoacyl-(acyl-carr | 0.811 | 0.985 | 0.429 | 6.9e-86 | |
| TIGR_CMR|CHY_1445 | 412 | CHY_1445 "3-oxoacyl-(acyl-carr | 0.821 | 0.992 | 0.414 | 3e-85 | |
| TIGR_CMR|DET_0963 | 422 | DET_0963 "3-oxoacyl-[acyl-carr | 0.821 | 0.969 | 0.414 | 2.4e-83 | |
| TIGR_CMR|ECH_0882 | 422 | ECH_0882 "3-oxoacyl-(acyl-carr | 0.817 | 0.964 | 0.417 | 4.5e-82 |
| TAIR|locus:2027252 FAB1 "fatty acid biosynthesis 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1186 (422.6 bits), Expect = 1.5e-120, P = 1.5e-120
Identities = 218/425 (51%), Positives = 300/425 (70%)
Query: 75 ASAPKREKDPKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGG 134
A+ K+ ++R+V+TGMG+ + G D FY LL+G SGIS I+ FD S F R G
Sbjct: 119 AAVNKKPPTEQRRVVVTGMGVETSLGHDPHTFYENLLQGNSGISQIENFDCSEFPTRIAG 178
Query: 135 QIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGM 194
+I+ FS++G++ K +R+D Y L AG++AL + ++ +V+ D+T+ GV++GS M
Sbjct: 179 EIKSFSTEGWVAPKLSKRMDKFMLYLLTAGKKALADGGVTDEVMAEFDKTKCGVLIGSAM 238
Query: 195 GGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANY 254
GG+ F +EAL + YKK+ PF +P++ TNMGSA+LA+D G MGPNYSISTACAT+N+
Sbjct: 239 GGMKVFYDAIEAL-RISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNF 297
Query: 255 CFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDG 314
C +ANHI +GE D+M+ GG++A IIP G+GGF+ACRALSQRN P +ASRPWD +RDG
Sbjct: 298 CILNSANHIIKGEADVMLCGGSDAVIIPIGLGGFVACRALSQRNNDPTKASRPWDTNRDG 357
Query: 315 FVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLE 374
FVMGEG G+L++E LEHA KRGA I AE+LGG+ TCDA+HMT+P DG GV CI ++L
Sbjct: 358 FVMGEGAGVLLLEELEHAKKRGATIYAEFLGGSFTCDAYHMTEPHPDGAGVILCIERALA 417
Query: 375 DAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIXXXXXXXXXXE 434
AG+S E++NY+NAHATST AGD+ E A+ F E+K+N TKSMI E
Sbjct: 418 SAGISKEQINYINAHATSTHAGDIKEYQALAHCFGQNPELKVNSTKSMIGHLLGAAGAVE 477
Query: 435 AITTIKAITTGWLHPTLNQDNLEPEVTIDT---VPNVKKQHHVNVAISNSFGFGGHNSVV 491
A+ T++AI TGW+HP +N +N P+ +DT V K++ + A+SNSFGFGGHNS +
Sbjct: 478 AVATVQAIRTGWVHPNINLEN--PDSGVDTKLLVGPKKERLDIKAALSNSFGFGGHNSSI 535
Query: 492 VFAPF 496
+FAP+
Sbjct: 536 IFAPY 540
|
|
| UNIPROTKB|Q9KQH9 fabF "3-oxoacyl-[acyl-carrier-protein] synthase 2" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
Score = 915 (327.2 bits), Expect = 8.1e-92, P = 8.1e-92
Identities = 187/412 (45%), Positives = 268/412 (65%)
Query: 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGY 144
K+R+V+TGMG++S G+ ++ + LL G+SGI I+ FD ++FS RF G ++ F + Y
Sbjct: 3 KRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKGFDCEQY 62
Query: 145 IDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGV 204
+ K+ R++D +Y + AG +ALE++ L +V E + RIGV +GSG+GGL TG
Sbjct: 63 MSKKDARKMDLFIQYGIAAGIQALEDSGL--EVNEE-NAARIGVAIGSGIGGLELIETGH 119
Query: 205 EALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIR 264
+ALI+KG +K++PFF+P +I NM + L+I GL GPN +ISTAC T + AA I
Sbjct: 120 QALIEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIA 179
Query: 265 RGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324
G+ D MVAGG E A P G+ GF A +ALS RN+ P++ASRPWDKDRDGFV+G+G GI+
Sbjct: 180 YGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAGIM 239
Query: 325 VMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVN 384
V+E EHA RGA I AE +G ++ DA+HMT P DG G + + ++ DAGV+ E++
Sbjct: 240 VLEEYEHAKARGAKIYAEVVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIG 299
Query: 385 YVNAHATSTLAGDLAEVNAIKKVFKD--TSEMKMNGTKSMIXXXXXXXXXXEAITTIKAI 442
YVNAH TST AGD+AEV IK+ + T ++ ++ TKSM EAI T+ ++
Sbjct: 300 YVNAHGTSTPAGDVAEVKGIKRALGEAGTKQVLVSSTKSMTGHLLGAAGSVEAIITVMSL 359
Query: 443 TTGWLHPTLNQDNLEPEVTIDTVPNV-KKQHHVNVAISNSFGFGGHNSVVVF 493
+ PT+N DN E + +D VP+V +K + A+ NSFGFGG N ++F
Sbjct: 360 VDQMVPPTINLDNPEEGLGVDLVPHVARKVESMEYAMCNSFGFGGTNGSLIF 411
|
|
| TIGR_CMR|VC_2019 VC_2019 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
Score = 915 (327.2 bits), Expect = 8.1e-92, P = 8.1e-92
Identities = 187/412 (45%), Positives = 268/412 (65%)
Query: 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGY 144
K+R+V+TGMG++S G+ ++ + LL G+SGI I+ FD ++FS RF G ++ F + Y
Sbjct: 3 KRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKGFDCEQY 62
Query: 145 IDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGV 204
+ K+ R++D +Y + AG +ALE++ L +V E + RIGV +GSG+GGL TG
Sbjct: 63 MSKKDARKMDLFIQYGIAAGIQALEDSGL--EVNEE-NAARIGVAIGSGIGGLELIETGH 119
Query: 205 EALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIR 264
+ALI+KG +K++PFF+P +I NM + L+I GL GPN +ISTAC T + AA I
Sbjct: 120 QALIEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIA 179
Query: 265 RGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324
G+ D MVAGG E A P G+ GF A +ALS RN+ P++ASRPWDKDRDGFV+G+G GI+
Sbjct: 180 YGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAGIM 239
Query: 325 VMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVN 384
V+E EHA RGA I AE +G ++ DA+HMT P DG G + + ++ DAGV+ E++
Sbjct: 240 VLEEYEHAKARGAKIYAEVVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIG 299
Query: 385 YVNAHATSTLAGDLAEVNAIKKVFKD--TSEMKMNGTKSMIXXXXXXXXXXEAITTIKAI 442
YVNAH TST AGD+AEV IK+ + T ++ ++ TKSM EAI T+ ++
Sbjct: 300 YVNAHGTSTPAGDVAEVKGIKRALGEAGTKQVLVSSTKSMTGHLLGAAGSVEAIITVMSL 359
Query: 443 TTGWLHPTLNQDNLEPEVTIDTVPNV-KKQHHVNVAISNSFGFGGHNSVVVF 493
+ PT+N DN E + +D VP+V +K + A+ NSFGFGG N ++F
Sbjct: 360 VDQMVPPTINLDNPEEGLGVDLVPHVARKVESMEYAMCNSFGFGGTNGSLIF 411
|
|
| TIGR_CMR|CBU_0497 CBU_0497 "3-oxoacyl-acyl carrier protein synthase II" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
Score = 883 (315.9 bits), Expect = 2.0e-88, P = 2.0e-88
Identities = 177/411 (43%), Positives = 254/411 (61%)
Query: 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGY 144
K+R+VITG+G+VS G+ + + LL G+SG+ PI RFDASSF + ++RDF
Sbjct: 3 KRRVVITGLGVVSPLGNKVSDMWQALLAGKSGVKPITRFDASSFPTQIAAEVRDFDPALV 62
Query: 145 IDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGV 204
+D K+ R+ D ++ + + R+A E++ L + + R+GV +GSG+GG+
Sbjct: 63 LDLKSIRKTDVFVQFAMESARQAWEDSGLE---INETNAPRVGVAIGSGIGGMPWIEKNY 119
Query: 205 EALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIR 264
+AL+ G +KI+PFFIP +I NM S +++I L GPN SI TAC T + AA I
Sbjct: 120 DALLTSGPRKISPFFIPGAIINMASGMVSIKYDLKGPNISIVTACTTGLHNIGHAARMIA 179
Query: 265 RGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324
+ D M+AGGTE A P G+GGF A RALS RN+ P++ASRPWDK RDGFV+GEG +
Sbjct: 180 HNDADAMIAGGTEMASTPLGIGGFAAVRALSTRNDEPEKASRPWDKGRDGFVLGEGAACV 239
Query: 325 VMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVN 384
V+E LEHA KR A I AE +G ++ DA+HMT P + G ++C+ SL DAG++PE V+
Sbjct: 240 VVEELEHAKKRNATIYAEIIGFGMSGDAYHMTRPDPEAEGFTTCMKNSLRDAGIAPERVD 299
Query: 385 YVNAHATSTLAGDLAEVNAIKKVFKDTS-EMKMNGTKSMIXXXXXXXXXXEAITTIKAIT 443
Y+NAH TST A D E AIKK F D + ++ ++ TKSM E + ++ AI
Sbjct: 300 YINAHGTSTPAADPLEARAIKKTFGDHAYKLAVSSTKSMTGHMLGAAGALETVISVLAIR 359
Query: 444 TGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494
PT+N +N + +D VPN ++ ++ +SNSFGFGG N +V +
Sbjct: 360 DNTAPPTINLENPDEGCDLDFVPNEAREMKIDTVMSNSFGFGGTNGTLVLS 410
|
|
| UNIPROTKB|P0AAI5 fabF "FabF" [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 875 (313.1 bits), Expect = 1.4e-87, P = 1.4e-87
Identities = 178/411 (43%), Positives = 261/411 (63%)
Query: 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGY 144
K+R+V+TG+G++S G+ ++ + LL G+SGIS ID FD S+++ +F G ++DF+ +
Sbjct: 3 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDI 62
Query: 145 IDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGV 204
I K R++D +Y +VAG +A++++ L ++ E + TRIG +GSG+GGL
Sbjct: 63 ISRKEQRKMDAFIQYGIVAGVQAMQDSGL--EITEE-NATRIGAAIGSGIGGLGLIEENH 119
Query: 205 EALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIR 264
+L+ G +KI+PFF+P +I NM + L I GL GP+ SI+TAC + + AA I
Sbjct: 120 TSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARIIA 179
Query: 265 RGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324
G+ D+MVAGG E A P GVGGF A RALS RN+ P+ ASRPWDK+RDGFV+G+G G+L
Sbjct: 180 YGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGML 239
Query: 325 VMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVN 384
V+E EHA KRGA I AE +G ++ DA+HMT P +G G + +A +L DAG+ ++
Sbjct: 240 VLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIG 299
Query: 385 YVNAHATSTLAGDLAEVNAIKKVFKDT-SEMKMNGTKSMIXXXXXXXXXXEAITTIKAIT 443
YVNAH TST AGD AE A+K +F + S + ++ TKSM E+I +I A+
Sbjct: 300 YVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALR 359
Query: 444 TGWLHPTLNQDNLEPEVTIDTVPNVKKQ-HHVNVAISNSFGFGGHNSVVVF 493
+ PT+N DN + +D VP+ +Q + + NSFGFGG N ++F
Sbjct: 360 DQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIF 410
|
|
| TIGR_CMR|SO_2774 SO_2774 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 871 (311.7 bits), Expect = 3.7e-87, P = 3.7e-87
Identities = 174/410 (42%), Positives = 258/410 (62%)
Query: 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGY 144
K+R+V+TG+GLV+ G+ +D + LL G+SGI+PI +FDAS F+ RF G ++DF + Y
Sbjct: 3 KRRVVVTGLGLVTPVGNTVDTTWKALLSGKSGIAPITKFDASEFTTRFSGSVKDFDVEQY 62
Query: 145 IDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGV 204
+ K+ R++D +Y + AG +A++++ L + ++ R+G +G+GMGG+
Sbjct: 63 LTKKDARKMDLFIQYGMAAGIQAIQDSGLD---MSKVNPGRVGTAIGAGMGGMWLIEQNH 119
Query: 205 EALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIR 264
AL+ G +KI+PFF+P +I NM + L+I G+ GPN++++TAC T + AA I
Sbjct: 120 SALMNGGPRKISPFFVPSTIINMIAGHLSIMYGMTGPNFAVTTACTTGVHNIGFAARTIA 179
Query: 265 RGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324
G+ D+MVAGG E P GVGGF A +ALS RN+ P ASRPWDKDRDGFV+G+G G++
Sbjct: 180 YGDADVMVAGGAEDVTCPLGVGGFGAAKALSTRNDDPTAASRPWDKDRDGFVIGDGAGVM 239
Query: 325 VMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVN 384
VME EHA RGA I E +G ++ DA HMT P SDG G ++ + ++ DA + E++
Sbjct: 240 VMEEYEHAKARGATIYGELVGFGMSGDAFHMTSPPSDGAGAAAAMVNAVNDAKLPLEKIG 299
Query: 385 YVNAHATSTLAGDLAEVNAIKKVFKDTS-EMKMNGTKSMIXXXXXXXXXXEAITTIKAIT 443
Y+NAH TST AGD AE A+K VF D + + ++ TKSM EAI T+ A+
Sbjct: 300 YINAHGTSTPAGDKAEAAAVKSVFGDHAYNLLVSSTKSMTGHLLGAAGAVEAIFTLLALR 359
Query: 444 TGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 493
+ PT+N DN + +D V + + ++ A+ NSFGFGG N ++F
Sbjct: 360 DQAVPPTINLDNPDEGCDLDFVAHTARDVKLDYALCNSFGFGGTNGSLLF 409
|
|
| TIGR_CMR|GSU_1605 GSU_1605 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 859 (307.4 bits), Expect = 6.9e-86, P = 6.9e-86
Identities = 176/410 (42%), Positives = 256/410 (62%)
Query: 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYI 145
+R+V+TG+G VS G ++ L+ G SGI I RFDAS VR G+++ F + YI
Sbjct: 2 RRVVVTGVGAVSPLGVGNAANWDALVSGTSGIGHITRFDASDLPVRIAGEVKGFDPEQYI 61
Query: 146 DGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLE-NMDRTRIGVVVGSGMGGLTSFTTGV 204
D K +++D +Y + A A+E++ L Q+ E N +RT GV+VG+G+GGL +
Sbjct: 62 DKKEVKKMDLFIQYAMAAAHYAMEDSGL--QITEENAERT--GVLVGAGLGGLPTIEKYH 117
Query: 205 EALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIR 264
A+++ G+KKI+PFFIP I N+ ++I G GPN S +ACAT + A + I+
Sbjct: 118 AAMLEGGHKKISPFFIPMLIINLAPGHISIKYGAKGPNLSSVSACATGTHSIGDAYHMIK 177
Query: 265 RGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324
RG+ D M+AGGTE+ + P G+GGF +ALS RN+ P ASRP++K+RDGFV+ EG GI+
Sbjct: 178 RGDADAMIAGGTESTVTPLGIGGFAVMKALSTRNDDPTAASRPFEKNRDGFVLAEGAGIV 237
Query: 325 VMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVN 384
V+E E A KRGA I AE +G +T DA+H+T P +G G + C+ +L +AGV PEEV+
Sbjct: 238 VLEEYEAAKKRGAKIYAEIVGYGLTGDAYHLTAPAPEGEGAARCMKMALNNAGVRPEEVD 297
Query: 385 YVNAHATSTLAGDLAEVNAIKKVFKDTSEMKM-NGTKSMIXXXXXXXXXXEAITTIKAIT 443
Y+NAH TST D E A+K VF D ++ M + TKSM EA+ T+ A+
Sbjct: 298 YINAHGTSTPFNDYYETLAVKSVFGDYAKKVMVSSTKSMTGHLLGAAGGVEAVFTLMAMD 357
Query: 444 TGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 493
G + PT+N +PE +D VPN ++ + A+SN+FGFGG N+ ++F
Sbjct: 358 KGVIPPTINYQEQDPECDLDYVPNAAREKSITYALSNNFGFGGTNATLLF 407
|
|
| TIGR_CMR|CHY_1445 CHY_1445 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
Identities = 171/413 (41%), Positives = 254/413 (61%)
Query: 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYI 145
KR+V+TG+GL+S G I + ++ L++G SG+ + FD + F+ R ++RDF +I
Sbjct: 2 KRVVVTGLGLISPLGIGIKENWDNLMKGVSGVREVSSFDTTGFATRIAAEVRDFDPLKFI 61
Query: 146 DGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVE 205
D K RR+D ++ + A + A+E+A L L ++ R G+ +GSG+GG+ +
Sbjct: 62 DKKEARRMDRFTQFAVAATKLAIEDAGLE---LSKINPERAGIFIGSGIGGIKTLEEQAA 118
Query: 206 ALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRR 265
L +KG +++PFF+P I NM +AI GL GPN +I +ACA+ A ++R
Sbjct: 119 ILREKGPDRVSPFFVPMMIANMAGGQIAITFGLTGPNETIVSACASGANAVGDAFRCLQR 178
Query: 266 GETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILV 325
GE D+ +AGG EAAI P GF + +A+S RN+ P++ASRP+DKDRDGFVMGEG GIL+
Sbjct: 179 GEVDVAIAGGAEAAITPLSFAGFCSMKAMSTRNDEPEKASRPFDKDRDGFVMGEGAGILI 238
Query: 326 MESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNY 385
+E+LEHA+ RGA I E +G VT DA+H+T P +G G + + +L+DA ++PE+++Y
Sbjct: 239 LETLEHALARGARIYGEIVGYGVTSDAYHITAPDPEGKGAARAMELALKDARLNPEDIDY 298
Query: 386 VNAHATSTLAGDLAEVNAIKKVFKDTS-EMKMNGTKSMIXXXXXXXXXXEAITTIKAITT 444
+NAH TST D E AIKKVF D + ++ ++ TKSM E I +I A+
Sbjct: 299 INAHGTSTPLNDKVETLAIKKVFGDHAYKLMVSSTKSMTGHLLGAAGGIETIYSILAVFF 358
Query: 445 GWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPFS 497
+ PTLN D E + +D VPN + V A+SNS GFGGHN ++ F+
Sbjct: 359 NQVPPTLNCDEPEEGLDLDYVPNTGRDTVVKAALSNSLGFGGHNVSLIVKKFN 411
|
|
| TIGR_CMR|DET_0963 DET_0963 "3-oxoacyl-[acyl-carrier-protein] synthase II" [Dehalococcoides ethenogenes 195 (taxid:243164)] | Back alignment and assigned GO terms |
|---|
Score = 835 (299.0 bits), Expect = 2.4e-83, P = 2.4e-83
Identities = 171/413 (41%), Positives = 251/413 (60%)
Query: 81 EKDPKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFS 140
+ P+ R+VITG+G+VS G D + L+ G SGI I FDAS+ +VRFGG+++DF
Sbjct: 3 DNQPQNRVVITGIGIVSPLGLDTQTTWEGLINGRSGIDHISLFDASNLAVRFGGEVKDFD 62
Query: 141 SKGYIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSF 200
YI K+ RR+D + + AG++ALE + L E++ R IGV+VGSG+GGL+
Sbjct: 63 PANYISRKDIRRMDRFAQLAVAAGKQALENSGLGAD--ESV-RQDIGVIVGSGIGGLSVL 119
Query: 201 TTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAA 260
++ +++G +++PF +P I +M A ++I GL GPN+ ++AC++ + A
Sbjct: 120 FEQIKVFLEQGPDRVSPFLVPMMIADMAGAQVSIQLGLKGPNFCTTSACSSGSDAIGTAF 179
Query: 261 NHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEG 320
IR G I++AGG E+ + P G GF A +ALS RNE P+ ASRP+D +RDGFV+ EG
Sbjct: 180 EKIRFGSAKIILAGGAESIMNPVGFAGFSALKALSTRNEDPQTASRPFDANRDGFVIAEG 239
Query: 321 CGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSP 380
ILV+E +E A RGANIIAE +G + DA H+T P G+ + I +L AG+ P
Sbjct: 240 AAILVLEEMESAKARGANIIAEIIGYGGSSDAFHITQPVESGVEAARAINIALNTAGIKP 299
Query: 381 EEVNYVNAHATSTLAGDLAEVNAIKKVFKDTS-EMKMNGTKSMIXXXXXXXXXXEAITTI 439
E V+Y+NAH TST D E NAIK F + + ++ ++ TKSM+ EA
Sbjct: 300 EAVDYINAHGTSTPLNDKMETNAIKVAFGEHARKLAISSTKSMLGHLIGGAGAIEASICA 359
Query: 440 KAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVV 492
I G + PT+N +P+ +D PN ++ V VA++NSFGFGGHNSV++
Sbjct: 360 LTIKNGIIPPTINYTTPDPDCDLDYTPNTARRAKVRVALNNSFGFGGHNSVLI 412
|
|
| TIGR_CMR|ECH_0882 ECH_0882 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)] | Back alignment and assigned GO terms |
|---|
Score = 823 (294.8 bits), Expect = 4.5e-82, P = 4.5e-82
Identities = 175/419 (41%), Positives = 256/419 (61%)
Query: 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRD------ 138
KKR+VITG+GLV+ GSD+ ++ L +G SGI IDRFD S + GQ+
Sbjct: 3 KKRVVITGLGLVTSLGSDLKTVWDSLSKGISGIRKIDRFDTSDLDCKVAGQVTTKPESEE 62
Query: 139 --FSSKGYIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGG 196
F + YI K+ +++D + + + +A+ +++L +++D +R+GV+VGSG+GG
Sbjct: 63 YIFDAGDYIPEKDLKKMDTFIHFGIASATQAINDSNLLDY--KDLDYSRVGVIVGSGIGG 120
Query: 197 LTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCF 256
L V L ++G K+I+PFFIP S+ N+ S +++ G G N ++ TAC+T
Sbjct: 121 LQFIEKTVICLKERGPKRISPFFIPASLINLTSGHISMKYGFTGLNDAVVTACSTGAQAI 180
Query: 257 YAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQR-NEYPKRASRPWDKDRDGF 315
AA I+ GE D+++AGGTE+AI G+ GF A +ALS + N+ P+ ASRPWDK RDGF
Sbjct: 181 GNAARVIQSGEADVIIAGGTESAICRIGIAGFAAMKALSTKFNDTPELASRPWDKQRDGF 240
Query: 316 VMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLED 375
VMGEG G++++E EHA KRGA I E LG +T DA+HM+ P +G G I +L +
Sbjct: 241 VMGEGSGVVILEDYEHAKKRGARIYGELLGYGMTSDAYHMSAPHPEGKGGIKSIELALSN 300
Query: 376 AGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTS-EMKMNGTKSMIXXXXXXXXXXE 434
A ++PE +NY+NAH TST GD E+ AIK VFK++ ++ ++ TKS I E
Sbjct: 301 AQLNPESINYINAHGTSTPIGDSIEIQAIKNVFKESVYKVPISSTKSSIGHLLGAAGSVE 360
Query: 435 AITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 493
AI I A+ TG PTLN + ++ VP ++H +N +SNSFGFGG N +VF
Sbjct: 361 AIFCILAMNTGIAPPTLNLHESSEDPKLNLVPLNAQEHKINYCLSNSFGFGGVNVSLVF 419
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q83E37 | FABF_COXBU | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4501 | 0.8172 | 0.9830 | yes | no |
| P0AAI8 | FABF_SHIFL | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4476 | 0.8152 | 0.9830 | yes | no |
| Q9NWU1 | OXSM_HUMAN | 2, ., 3, ., 1, ., 4, 1 | 0.3744 | 0.8775 | 0.9520 | yes | no |
| Q8NXE1 | FABF_STAAW | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4417 | 0.8172 | 0.9830 | yes | no |
| P0AAI6 | FABF_ECOL6 | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4476 | 0.8152 | 0.9830 | yes | no |
| P57193 | FABB_BUCAI | 2, ., 3, ., 1, ., 4, 1 | 0.3405 | 0.8072 | 0.9901 | yes | no |
| O94297 | OXSM_SCHPO | 2, ., 3, ., 1, ., 4, 1 | 0.3552 | 0.8212 | 0.9600 | yes | no |
| P43710 | FABB_HAEIN | 2, ., 3, ., 1, ., 4, 1 | 0.3542 | 0.8052 | 0.9876 | yes | no |
| O34340 | FABF_BACSU | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4323 | 0.8212 | 0.9903 | yes | no |
| P52410 | KASC1_ARATH | 2, ., 3, ., 1, ., 4, 1 | 0.7533 | 0.8895 | 0.9365 | yes | no |
| Q9KQH9 | FABF_VIBCH | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4660 | 0.8152 | 0.9806 | yes | no |
| Q5TKS0 | FABF_STAAU | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4408 | 0.8052 | 0.9950 | yes | no |
| Q99VA6 | FABF_STAAM | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4368 | 0.8172 | 0.9830 | yes | no |
| Q5HHA1 | FABF_STAAC | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4417 | 0.8172 | 0.9830 | yes | no |
| P55338 | FABF_VIBHA | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4452 | 0.8152 | 0.9783 | yes | no |
| Q0VCA7 | OXSM_BOVIN | 2, ., 3, ., 1, ., 4, 1 | 0.3880 | 0.8172 | 0.8847 | yes | no |
| Q7A6F8 | FABF_STAAN | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4368 | 0.8172 | 0.9830 | yes | no |
| Q6GIA3 | FABF_STAAR | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4403 | 0.8152 | 0.9806 | yes | no |
| P56902 | FABF_RHIME | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4109 | 0.8212 | 0.9714 | yes | no |
| Q9D404 | OXSM_MOUSE | 2, ., 3, ., 1, ., 4, 1 | 0.3952 | 0.8172 | 0.8867 | yes | no |
| Q6GAU2 | FABF_STAAS | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4417 | 0.8172 | 0.9830 | yes | no |
| P23902 | KASC1_HORVU | 2, ., 3, ., 1, ., 4, 1 | 0.7706 | 0.8453 | 0.9112 | N/A | no |
| Q89AY4 | FABB_BUCBP | 2, ., 3, ., 1, ., 4, 1 | 0.3414 | 0.8092 | 0.9901 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.3.1 | 0.976 |
| 3rd Layer | 2.3.1.41 | 0.991 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 498 | |||
| cd00834 | 406 | cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier prot | 0.0 | |
| TIGR03150 | 407 | TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protei | 0.0 | |
| PLN02787 | 540 | PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protei | 0.0 | |
| PRK06333 | 424 | PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protei | 0.0 | |
| PRK07314 | 411 | PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protei | 0.0 | |
| COG0304 | 412 | COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) sy | 1e-161 | |
| PTZ00050 | 421 | PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein | 1e-132 | |
| PRK08722 | 414 | PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protei | 1e-121 | |
| PRK08439 | 406 | PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protei | 1e-120 | |
| PLN02836 | 437 | PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protei | 1e-106 | |
| PRK07910 | 418 | PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protei | 4e-90 | |
| PRK07967 | 406 | PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protei | 2e-80 | |
| PRK06501 | 425 | PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protei | 6e-77 | |
| PRK09116 | 405 | PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protei | 8e-75 | |
| cd00828 | 407 | cd00828, elong_cond_enzymes, "elongating" condensi | 6e-74 | |
| PRK14691 | 342 | PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protei | 4e-72 | |
| PRK07103 | 410 | PRK07103, PRK07103, polyketide beta-ketoacyl:acyl | 2e-69 | |
| pfam00109 | 243 | pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, | 2e-61 | |
| cd00833 | 421 | cd00833, PKS, polyketide synthases (PKSs) polymeri | 2e-59 | |
| PRK05952 | 381 | PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protei | 5e-55 | |
| cd00832 | 399 | cd00832, CLF, Chain-length factor (CLF) is a facto | 2e-49 | |
| cd00825 | 332 | cd00825, decarbox_cond_enzymes, decarboxylating co | 5e-48 | |
| PRK09185 | 392 | PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protei | 4e-43 | |
| COG3321 | 1061 | COG3321, COG3321, Polyketide synthase modules and | 9e-39 | |
| pfam02801 | 119 | pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase | 3e-36 | |
| TIGR02813 | 2582 | TIGR02813, omega_3_PfaA, polyketide-type polyunsat | 5e-24 | |
| cd00327 | 254 | cd00327, cond_enzymes, Condensing enzymes; Family | 1e-23 | |
| smart00825 | 298 | smart00825, PKS_KS, Beta-ketoacyl synthase | 1e-14 | |
| PRK06519 | 398 | PRK06519, PRK06519, 3-oxoacyl-(acyl carrier protei | 1e-04 | |
| smart00825 | 298 | smart00825, PKS_KS, Beta-ketoacyl synthase | 2e-04 | |
| cd00829 | 375 | cd00829, SCP-x_thiolase, Thiolase domain associate | 0.004 |
| >gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Score = 559 bits (1443), Expect = 0.0
Identities = 201/409 (49%), Positives = 279/409 (68%), Gaps = 4/409 (0%)
Query: 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYI 145
+R+VITG+G V+ G+ +++F+ LL G SGI PI RFDAS F R G++ DF + Y+
Sbjct: 1 RRVVITGLGAVTPLGNGVEEFWEALLAGRSGIRPITRFDASGFPSRIAGEVPDFDPEDYL 60
Query: 146 DGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVE 205
D K RR+D ++ L A AL +A L P E +D RIGVV+GSG+GGL +
Sbjct: 61 DRKELRRMDRFAQFALAAAEEALADAGLDP---EELDPERIGVVIGSGIGGLATIEEAYR 117
Query: 206 ALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRR 265
AL++KG ++++PFF+P ++ NM + +AI GL GPNY++STACA+ + AA IR
Sbjct: 118 ALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLRGPNYTVSTACASGAHAIGDAARLIRL 177
Query: 266 GETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILV 325
G D+++AGG EA I P + GF A RALS RN+ P++ASRP+DKDRDGFV+GEG G+LV
Sbjct: 178 GRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDRDGFVLGEGAGVLV 237
Query: 326 MESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNY 385
+ESLEHA RGA I AE LG + DA+H+T P DG G + + +L DAG+SPE+++Y
Sbjct: 238 LESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPEDIDY 297
Query: 386 VNAHATSTLAGDLAEVNAIKKVFKDTSE-MKMNGTKSMIGHGLGAAGGLEAITTIKAITT 444
+NAH TST D AE AIK+VF + ++ + ++ TKSM GH LGAAG +EAI T+ A+
Sbjct: 298 INAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLALRD 357
Query: 445 GWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 493
G L PT+N + +PE +D VPN ++ + A+SNSFGFGGHN+ +VF
Sbjct: 358 GVLPPTINLEEPDPECDLDYVPNEAREAPIRYALSNSFGFGGHNASLVF 406
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. Length = 406 |
| >gnl|CDD|200247 TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Score = 555 bits (1433), Expect = 0.0
Identities = 198/409 (48%), Positives = 285/409 (69%), Gaps = 4/409 (0%)
Query: 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYI 145
+R+V+TG+G V+ G+ +++F+ LL G+SGI PI RFDAS V+ G+++DF + YI
Sbjct: 1 RRVVVTGLGAVTPLGNGVEEFWENLLAGKSGIGPITRFDASDLPVKIAGEVKDFDPEDYI 60
Query: 146 DGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVE 205
D K RR+D +Y L A + A+E++ L +E D R+GV++GSG+GGL +
Sbjct: 61 DKKEARRMDRFIQYALAAAKEAVEDSGL---DIEEEDAERVGVIIGSGIGGLETIEEQHI 117
Query: 206 ALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRR 265
L++KG ++++PFFIP SI NM + ++I G GPN+++ TACAT + A I+R
Sbjct: 118 VLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAKGPNHAVVTACATGTHAIGDAFRLIQR 177
Query: 266 GETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILV 325
G+ D+M+AGG EAAI P G+ GF A +ALS RN+ P++ASRP+DKDRDGFVMGEG G+LV
Sbjct: 178 GDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDRDGFVMGEGAGVLV 237
Query: 326 MESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNY 385
+E LEHA RGA I AE +G ++ DA+H+T P +G G + + +L+DAG++PE+V+Y
Sbjct: 238 LEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDVDY 297
Query: 386 VNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITT 444
+NAH TST GD AE AIK+VF D ++ ++ TKSM GH LGAAG +EAI T+ A+
Sbjct: 298 INAHGTSTPLGDKAETKAIKRVFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIFTVLALRD 357
Query: 445 GWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 493
G + PT+N DN +PE +D VPN ++ ++ A+SNSFGFGGHN+ +VF
Sbjct: 358 GIVPPTINLDNPDPECDLDYVPNEAREAKIDYALSNSFGFGGHNASLVF 406
|
3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II, FabF) is involved in the condensation step of fatty acid biosynthesis in which the malonyl donor group is decarboxylated and the resulting carbanion used to attack and extend the acyl group attached to the acyl carrier protein. Most genomes encoding fatty acid biosynthesis contain a number of condensing enzymes, often of all three types: 1, 2 and 3. Synthase 2 is mechanistically related to synthase 1 (KAS-I, FabB) containing a number of absolutely conserved catalytic residues in common. This model is based primarily on genes which are found in apparent operons with other essential genes of fatty acid biosynthesis (GenProp0681). The large gap between the trusted cutoff and the noise cutoff contains many genes which are not found adjacent to genes of the fatty acid pathway in genomes that often also contain a better hit to this model. These genes may be involved in other processes such as polyketide biosyntheses. Some genomes contain more than one above-trusted hit to this model which may result from recent paralogous expansions. Second hits to this model which are not next to other fatty acid biosynthesis genes may be involved in other processes. FabB sequences should fall well below the noise cutoff of this model [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 407 |
| >gnl|CDD|215421 PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Score = 558 bits (1439), Expect = 0.0
Identities = 245/492 (49%), Positives = 334/492 (67%), Gaps = 13/492 (2%)
Query: 17 NKQVKSNGAASLAQYSGLRPAENFQFASAGITTTIKQSGLICSSGPKCRTIRVMASPTAS 76
+ + + P ++ + +++ S + + + R R S A
Sbjct: 49 CSSASGSASILVTSCLAFGPCTHYNSSGGNALSSLFGSNSVSLNRNQRRRNRAARSGKAM 108
Query: 77 A----PKREKDPKK-------RIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDA 125
A P++E + KK R+V+TGMG+VS G D D FYN LLEG SGIS I+RFD
Sbjct: 109 AVAVQPEKEVETKKKPLTKQRRVVVTGMGVVSPLGHDPDVFYNNLLEGVSGISEIERFDC 168
Query: 126 SSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTR 185
S F R G+I+ FS+ G++ K +R+D Y L AG++AL + ++ V++ +D+T+
Sbjct: 169 SQFPTRIAGEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMKELDKTK 228
Query: 186 IGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSI 245
GV++GS MGG+ F +EAL + Y+K+ PF +P++ TNMGSA+LA+D G MGPNYSI
Sbjct: 229 CGVLIGSAMGGMKVFNDAIEAL-RISYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSI 287
Query: 246 STACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRAS 305
STACAT+N+C AANHI RGE D+M+ GG++AAIIP G+GGF+ACRALSQRN+ P +AS
Sbjct: 288 STACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKAS 347
Query: 306 RPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGV 365
RPWD +RDGFVMGEG G+L++E LEHA KRGANI AE+LGG+ TCDA+HMT+P +G GV
Sbjct: 348 RPWDMNRDGFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGV 407
Query: 366 SSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGH 425
CI K+L +GVS E+VNY+NAHATST AGDL E A+ + F E+++N TKSMIGH
Sbjct: 408 ILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQNPELRVNSTKSMIGH 467
Query: 426 GLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQH-HVNVAISNSFGF 484
LGAAG +EAI T++AI TGW+HP +N +N E V + KK+ + VA+SNSFGF
Sbjct: 468 LLGAAGAVEAIATVQAIRTGWVHPNINLENPESGVDTKVLVGPKKERLDIKVALSNSFGF 527
Query: 485 GGHNSVVVFAPF 496
GGHNS ++FAP+
Sbjct: 528 GGHNSSILFAPY 539
|
Length = 540 |
| >gnl|CDD|235781 PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 531 bits (1371), Expect = 0.0
Identities = 189/425 (44%), Positives = 256/425 (60%), Gaps = 12/425 (2%)
Query: 84 PKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRD----- 138
KKRIV+TGMG VS G ++ F+ +LL G+SGI + F + + GGQ+ D
Sbjct: 2 NKKRIVVTGMGAVSPLGCGVETFWQRLLAGQSGIRTLTDFPVGDLATKIGGQVPDLAEDA 61
Query: 139 ---FSSKGYIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMG 195
F Y+D K+ R++D + + A + AL +A P LE DR R ++GSG+G
Sbjct: 62 EAGFDPDRYLDPKDQRKMDRFILFAMAAAKEALAQAGWDPDTLE--DRERTATIIGSGVG 119
Query: 196 GLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYC 255
G + V L +G ++++PF IP +TNM + ++I G GP + TACA
Sbjct: 120 GFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYGFKGPLGAPVTACAAGVQA 179
Query: 256 FYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQR-NEYPKRASRPWDKDRDG 314
AA IR GE D+ V GGTEAAI + GF A RALS R N+ P++ASRP+D+DRDG
Sbjct: 180 IGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRDRDG 239
Query: 315 FVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLE 374
FVMGEG GILV+E+LEHA+ RGA +AE +G + DA+HMT DG G + +L
Sbjct: 240 FVMGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALR 299
Query: 375 DAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLE 434
AG+ PEEV ++NAHATST GDL EV AIKKVF S + ++ TKS GH LGAAGG+E
Sbjct: 300 QAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFGHVSGLAVSSTKSATGHLLGAAGGVE 359
Query: 435 AITTIKAITTGWLHPTLNQDNLEPEVT-IDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 493
AI TI A+ PTLN +N +P +D V N + ++ A+SN FGFGG N+ ++F
Sbjct: 360 AIFTILALRDQIAPPTLNLENPDPAAEGLDVVANKARPMDMDYALSNGFGFGGVNASILF 419
Query: 494 APFSP 498
+ P
Sbjct: 420 RRWEP 424
|
Length = 424 |
| >gnl|CDD|235987 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 529 bits (1365), Expect = 0.0
Identities = 198/410 (48%), Positives = 279/410 (68%), Gaps = 4/410 (0%)
Query: 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGY 144
K+R+V+TG+G VS G+D++ + LL G+SGI PI FD S +V+ G+++DF+ Y
Sbjct: 1 KRRVVVTGLGAVSPLGNDVESTWKNLLAGKSGIGPITHFDTSDLAVKIAGEVKDFNPDDY 60
Query: 145 IDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGV 204
+ K RR+D +Y + A ++A+E+A L + RIGV++GSG+GGL +
Sbjct: 61 MSRKEARRMDRFIQYGIAAAKQAVEDAGLEI---TEENADRIGVIIGSGIGGLETIEEQH 117
Query: 205 EALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIR 264
L++KG ++++PFF+P +I NM + ++I G GPN+SI TACAT + AA I
Sbjct: 118 ITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGAKGPNHSIVTACATGAHAIGDAARLIA 177
Query: 265 RGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324
G+ D+MVAGG EAAI P G+ GF A RALS RN+ P+RASRP+DKDRDGFVMGEG GIL
Sbjct: 178 YGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDRDGFVMGEGAGIL 237
Query: 325 VMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVN 384
V+E LEHA RGA I AE +G +T DA+HMT P DG G + + +L+DAG++PE+++
Sbjct: 238 VLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPEDID 297
Query: 385 YVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAIT 443
Y+NAH TST AGD AE AIK+VF + ++ ++ TKSM GH LGAAG +EAI ++ AI
Sbjct: 298 YINAHGTSTPAGDKAETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIR 357
Query: 444 TGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 493
+ PT+N DN + E +D VPN ++ ++ A+SNSFGFGG N+ +VF
Sbjct: 358 DQVIPPTINLDNPDEECDLDYVPNEARERKIDYALSNSFGFGGTNASLVF 407
|
Length = 411 |
| >gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 463 bits (1194), Expect = e-161
Identities = 191/412 (46%), Positives = 269/412 (65%), Gaps = 8/412 (1%)
Query: 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGY 144
+R+VITG+G+VS G+ +++ + LL G+SGI PI RFDAS V+ G+I+D
Sbjct: 2 MRRVVITGLGIVSSLGNGVEEVWAALLAGKSGIRPITRFDASGLGVKIAGEIKDLDD--Q 59
Query: 145 IDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGV 204
I K R +D + +VA ALE+A L ++ + R+GV +GSG+GGL +
Sbjct: 60 IAKKERRFMDRFSQLAVVAAVEALEDAGLDNELNVD---MRVGVAIGSGIGGLEDIEFDL 116
Query: 205 EALIQKGYKK-ITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHI 263
+AL+ +G +K I+PF +P + N+ + +AI GL GPNY+ TACAT + A I
Sbjct: 117 DALLLEGLRKRISPFLVPKMLPNLAAGNVAIVFGLKGPNYTPVTACATGAHAIGDAVRLI 176
Query: 264 RRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGI 323
R G+ D+++AGG EAAI P G+ GF A RALS RN+ P++ASRP+DK+RDGFV+GEG G
Sbjct: 177 RLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKNRDGFVIGEGAGA 236
Query: 324 LVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEV 383
LV+E LEHA+ RGA I AE +G T DA+H+T P DG G + +L DAG++PE++
Sbjct: 237 LVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLTPEDI 296
Query: 384 NYVNAHATSTLAGDLAEVNAIKKVFKDT-SEMKMNGTKSMIGHGLGAAGGLEAITTIKAI 442
+Y+NAH TST A D AE AIK+VF + + ++ TKS+ GH LGAAG +EAI ++ A+
Sbjct: 297 DYINAHGTSTPANDKAESLAIKRVFGEHAKSLPVSSTKSLTGHTLGAAGAVEAIISLLAL 356
Query: 443 TTGWLHPTLNQDNLEPE-VTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 493
G + PT+N DN +PE +D VPN + V A+SNSFGFGG N+ +VF
Sbjct: 357 RDGIIPPTINLDNPDPEAADLDVVPNEARTGAVRAALSNSFGFGGTNASLVF 408
|
Length = 412 |
| >gnl|CDD|240245 PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Score = 390 bits (1003), Expect = e-132
Identities = 165/427 (38%), Positives = 242/427 (56%), Gaps = 31/427 (7%)
Query: 95 LVSVFGSDIDKFYNKLLEGESGISPIDRFDA----------------SSFSVRFGGQIR- 137
+V+ G + + L+ G+SGI + F ++ + ++
Sbjct: 1 VVTPLGVGAESTWEALIAGKSGIRKLTEFPKFLPDCIPEQKALENLVAAMPCQIAAEVDQ 60
Query: 138 -DFSSKGYIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGG 196
+F + K + + + A R AL +A L +L D+ RIGV +GSG+G
Sbjct: 61 SEFDPSDFAPTKRE---SRATHFAMAAAREALADAKL--DILSEKDQERIGVNIGSGIGS 115
Query: 197 LTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCF 256
L T ++ L +KG+ +++P+FIP + NM + L+AI L GP+ S TACAT +C
Sbjct: 116 LADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHKLKGPSGSAVTACATGAHCI 175
Query: 257 YAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQR-NEYPKRASRPWDKDRDGF 315
A I+ GE DIM+ GGTEA+I P GF RAL + N+ P+RASRP+DKDR GF
Sbjct: 176 GEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDRAGF 235
Query: 316 VMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLED 375
VMGEG GILV+E LEHA++RGA I AE G + DAHH+T P DG G C+ +L+D
Sbjct: 236 VMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKD 295
Query: 376 AG-VSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD--TSEMKMNGTKSMIGHGLGAAGG 432
++ +V+YVNAHATST GD E+ AIKKVF D ++ ++ TK +GH LGAAG
Sbjct: 296 GANININDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGA 355
Query: 433 LEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQH---HVNVAISNSFGFGGHNS 489
+E+I TI ++ + PT+N +N + E ++ V K H ++ +S SFGFGG N+
Sbjct: 356 VESIVTILSLYEQIIPPTINLENPDAECDLNLVQG-KTAHPLQSIDAVLSTSFGFGGVNT 414
Query: 490 VVVFAPF 496
++F +
Sbjct: 415 ALLFTKY 421
|
Length = 421 |
| >gnl|CDD|181539 PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 362 bits (929), Expect = e-121
Identities = 189/415 (45%), Positives = 276/415 (66%), Gaps = 6/415 (1%)
Query: 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGY 144
K+R+V+TGMG++S G+ ++ + LL G+SGI I+ FD ++FS RF G ++DF+ + Y
Sbjct: 3 KRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKDFNCEEY 62
Query: 145 IDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGV 204
+ K+ R++D +Y + AG +AL+++ L +V E + RIGV +GSG+GGL G
Sbjct: 63 MSKKDARKMDLFIQYGIAAGIQALDDSGL--EVTEE-NAHRIGVAIGSGIGGLGLIEAGH 119
Query: 205 EALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIR 264
+AL++KG +K++PFF+P +I NM + L+I GL GPN +ISTAC T + AA I
Sbjct: 120 QALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIA 179
Query: 265 RGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324
G+ D MVAGG E A P G+ GF A +ALS RN+ P++ASRPWDKDRDGFV+G+G G++
Sbjct: 180 YGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAGMM 239
Query: 325 VMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVN 384
V+E EHA RGA I AE +G ++ DA+HMT P DG G + + ++ DAGV+ E++
Sbjct: 240 VLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIG 299
Query: 385 YVNAHATSTLAGDLAEVNAIKKVFKD--TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAI 442
YVNAH TST AGD+AE+ IK+ + + ++ ++ TKSM GH LGAAG +EAI T+ ++
Sbjct: 300 YVNAHGTSTPAGDVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVMSL 359
Query: 443 TTGWLHPTLNQDNLEPEVTIDTVPNV-KKQHHVNVAISNSFGFGGHNSVVVFAPF 496
+ PT+N D+ E + ID VP+ +K + AI NSFGFGG N ++F
Sbjct: 360 VDQIVPPTINLDDPEEGLDIDLVPHTARKVESMEYAICNSFGFGGTNGSLIFKKM 414
|
Length = 414 |
| >gnl|CDD|236265 PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 358 bits (921), Expect = e-120
Identities = 177/409 (43%), Positives = 248/409 (60%), Gaps = 8/409 (1%)
Query: 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYI 145
KR+V+TG+G+++ G + + + + GE GI I FDAS F V+ G+I DF +
Sbjct: 2 KRVVVTGIGMINSLGLNKESSFKAICNGECGIKKITLFDASDFPVQIAGEITDFDPTEVM 61
Query: 146 DGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVE 205
D K ++ D + L A R A+++A P E +D R GV SG+GGL +
Sbjct: 62 DPKEVKKADRFIQLGLKAAREAMKDAGFLP---EELDAERFGVSSASGIGGLPNIEKNSI 118
Query: 206 ALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRR 265
+KG +KI+PFFIP ++ NM ++I+ GL GPN S TACA + A I
Sbjct: 119 ICFEKGPRKISPFFIPSALVNMLGGFISIEHGLKGPNLSSVTACAAGTHAIIEAVKTIML 178
Query: 266 GETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILV 325
G D M+ G E+AI P G+GGF A +ALS RN+ PK+ASRP+DKDRDGFVMGEG G LV
Sbjct: 179 GGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDRDGFVMGEGAGALV 238
Query: 326 MESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNY 385
+E E A KRGA I AE +G + DA+H+T P + G + +LE AG +++Y
Sbjct: 239 LEEYESAKKRGAKIYAEIIGFGESGDANHITSPAPE--GPLRAMKAALEMAGNP--KIDY 294
Query: 386 VNAHATSTLAGDLAEVNAIKKVFKDTSEM-KMNGTKSMIGHGLGAAGGLEAITTIKAITT 444
+NAH TST D E A+K++F ++ ++ TK IGH LGAAG +EA+ +I A+
Sbjct: 295 INAHGTSTPYNDKNETAALKELFGSKEKVPPVSSTKGQIGHCLGAAGAIEAVISIMAMRD 354
Query: 445 GWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 493
G L PT+NQ+ +PE +D +PNV ++ +NV +SNSFGFGG N VV+F
Sbjct: 355 GILPPTINQETPDPECDLDYIPNVARKAELNVVMSNSFGFGGTNGVVIF 403
|
Length = 406 |
| >gnl|CDD|215449 PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Score = 322 bits (827), Expect = e-106
Identities = 165/436 (37%), Positives = 239/436 (54%), Gaps = 30/436 (6%)
Query: 84 PKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPI-----------DRFDASSFS--- 129
P +R+V+TG+GLV+ G ++ + +L+ GE G+ + + +
Sbjct: 4 PTRRVVVTGLGLVTPLGCGVETTWRRLIAGECGVRALTQDDLKMKSEDEETQLYTLDQLP 63
Query: 130 ------VRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDR 183
V G DF + ++ N R Y L A AL +A P E +R
Sbjct: 64 SRVAALVPRGTGPGDFDEELWL---NSRSSSRFIGYALCAADEALSDARWLPSEDEAKER 120
Query: 184 TRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNY 243
T GV +G G+G +T + + +K ++++PFF+P + NM + ++I G GPN+
Sbjct: 121 T--GVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYGFQGPNH 178
Query: 244 SISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQR-NEYPK 302
+ TACAT + A I+ G+ D+MVAGGTE++I + GF RALS + N P
Sbjct: 179 AAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPT 238
Query: 303 RASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDG 362
ASRP+D DRDGFV+GEG G+LV+E LEHA +RGA I AE G ++ DAHH+T P DG
Sbjct: 239 EASRPFDCDRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDG 298
Query: 363 LGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD---TSEMKMNGT 419
G + ++L+ +G+ P +V+YVNAHATST GD E AIK VF + + + + T
Sbjct: 299 RGAVLAMTRALQQSGLHPNQVDYVNAHATSTPLGDAVEARAIKTVFSEHATSGGLAFSST 358
Query: 420 KSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVK-KQHHVNVAI 478
K GH LGAAG +EAI ++ AI G PTLN + +P VP K + A+
Sbjct: 359 KGATGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERPDPIFDDGFVPLTASKAMLIRAAL 418
Query: 479 SNSFGFGGHNSVVVFA 494
SNSFGFGG N+ ++F
Sbjct: 419 SNSFGFGGTNASLLFT 434
|
Length = 437 |
| >gnl|CDD|236129 PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 281 bits (720), Expect = 4e-90
Identities = 141/410 (34%), Positives = 218/410 (53%), Gaps = 12/410 (2%)
Query: 88 IVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFS--VRFGGQI-RDFSSKGY 144
+V+TG+ + + +D + + LL+G+SGI +D F VR GG + +F
Sbjct: 14 VVVTGIAMTTALATDAETTWKLLLDGQSGIRTLDDPFVEEFDLPVRIGGHLLEEFDH--Q 71
Query: 145 IDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGV 204
+ RR+ R V GRR E A SP+V D R+ V +G+G+G
Sbjct: 72 LTRVELRRMSYLQRMSTVLGRRVWENAG-SPEV----DTNRLMVSIGTGLGSAEELVFAY 126
Query: 205 EALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIR 264
+ + +G + ++P + + N +A + ++ + +ACA+ + A I
Sbjct: 127 DDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAKAGVITPVSACASGSEAIAQAWRQIV 186
Query: 265 RGETDIMVAGGTEAAIIPTGVGGFIACRA-LSQRNEYPKRASRPWDKDRDGFVMGEGCGI 323
GE DI + GG E I + GF R +S N+ P A RP+DKDRDGFV GEG +
Sbjct: 187 LGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDRDGFVFGEGGAL 246
Query: 324 LVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEV 383
+V+E+ EHA RGANI+A +G ++T D HM P +G + +++E AG++P ++
Sbjct: 247 MVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPGDI 306
Query: 384 NYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAIT 443
++VNAHAT T GD+AE AI + KS +GH +GA G +E+I T+ A+
Sbjct: 307 DHVNAHATGTSVGDVAEGKAINNAL-GGHRPAVYAPKSALGHSVGAVGAVESILTVLALR 365
Query: 444 TGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 493
G + PTLN +NL+PE+ +D V + + AI+NSFGFGGHN + F
Sbjct: 366 DGVIPPTLNLENLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVALAF 415
|
Length = 418 |
| >gnl|CDD|181184 PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Score = 256 bits (655), Expect = 2e-80
Identities = 150/411 (36%), Positives = 227/411 (55%), Gaps = 14/411 (3%)
Query: 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYI 145
+R+VITG+G+VS G++ + L EG SGI+ F + G + G I
Sbjct: 2 RRVVITGLGIVSSIGNNQQEVLASLREGRSGITFSPEFAEMGMRSQVWGNV-KLDPTGLI 60
Query: 146 DGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVE 205
D K R + D Y +A +A+ +A LS + + N R G++ GSG G + +
Sbjct: 61 DRKVMRFMGDASAYAYLAMEQAIADAGLSEEQVSN---PRTGLIAGSGGGSTRNQVEAAD 117
Query: 206 ALIQ-KGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIR 264
A+ +G K++ P+ + ++ + SA LA + G NYSIS+ACAT+ +C A I+
Sbjct: 118 AMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIKGVNYSISSACATSAHCIGNAVEQIQ 177
Query: 265 RGETDIMVAGGTEAAIIPTGVGGFIACRALS-QRNEYPKRASRPWDKDRDGFVMGEGCGI 323
G+ DI+ AGG E + F A ALS + N+ P++ASR +D +RDGFV+ G G+
Sbjct: 178 LGKQDIVFAGGGEE-LDWEMSCLFDAMGALSTKYNDTPEKASRAYDANRDGFVIAGGGGV 236
Query: 324 LVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEV 383
+V+E LEHA+ RGA I AE +G T D + M P G G C+ +L A V +
Sbjct: 237 VVVEELEHALARGAKIYAEIVGYGATSDGYDMVAP--SGEGAVRCMQMAL--ATVD-TPI 291
Query: 384 NYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAIT 443
+Y+N H TST GD+ E+ AI++VF D S ++ TKS+ GH LGAAG EAI ++ +
Sbjct: 292 DYINTHGTSTPVGDVKELGAIREVFGDKSP-AISATKSLTGHSLGAAGVQEAIYSLLMME 350
Query: 444 TGWLHPTLNQDNLEPEVT-IDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 493
G++ P+ N + L+P+ + V + +SNSFGFGG N+ +VF
Sbjct: 351 HGFIAPSANIEELDPQAAGMPIVTETTDNAELTTVMSNSFGFGGTNATLVF 401
|
Length = 406 |
| >gnl|CDD|235817 PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 247 bits (632), Expect = 6e-77
Identities = 146/421 (34%), Positives = 204/421 (48%), Gaps = 26/421 (6%)
Query: 88 IVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDG 147
+ +TGMG+V+ G + L GESGI I RF R G + DF
Sbjct: 13 VAVTGMGVVTSLGQGKADNWAALTAGESGIHTITRFPTEGLRTRIAGTV-DFLP---ESP 68
Query: 148 KNDRRLDDCWRYCLVAGRRALEEASLS-------------PQVLENMDRTRIGVVVGSGM 194
L + +A AL +A + P LE R + VG
Sbjct: 69 FGASALSE--ALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDN- 125
Query: 195 GGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANY 254
S+ + A + + F SI + LA G G S+STACA+
Sbjct: 126 -DAPSYDRLLRAARGGRFDALHERFQFGSI----ADRLADRFGTRGLPISLSTACASGAT 180
Query: 255 CFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDG 314
IRRGETD + T+ ++ + F ALS +N+ P++AS+P+ KDRDG
Sbjct: 181 AIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKASKPFSKDRDG 240
Query: 315 FVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLE 374
FVM EG G LV+ESLE A+ RGA I+ G D+ H T DG I +L
Sbjct: 241 FVMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAALA 300
Query: 375 DAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGL 433
DAG++PE+++Y+NAH TST D E + VF + + + ++ KSMIGH L AAG +
Sbjct: 301 DAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFGERLASIPVSSNKSMIGHTLTAAGAV 360
Query: 434 EAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 493
EA+ ++ I TG L PT+N DN +P + +D VPNV + V +SNSFGFGG N+ +V
Sbjct: 361 EAVFSLLTIQTGRLPPTINYDNPDPAIPLDVVPNVARDARVTAVLSNSFGFGGQNASLVL 420
Query: 494 A 494
Sbjct: 421 T 421
|
Length = 425 |
| >gnl|CDD|181657 PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 241 bits (616), Expect = 8e-75
Identities = 137/422 (32%), Positives = 206/422 (48%), Gaps = 33/422 (7%)
Query: 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFD-ASSFSVRFGGQIRDFSSKGY 144
+R+V+TGMG V+ G D +L G + + + +D + R I DF +
Sbjct: 2 RRVVVTGMGGVTALGEDWQTIAARLKAGRNAVRRMPEWDRYDGLNTRLAAPIDDFELPAH 61
Query: 145 IDGKNDRRLDDCWRYCLVAGRRALEEASL-SPQVLENMDRTRIGVVVGSGMGG------- 196
K R + A ALE+A L +L + R+G+ GS G
Sbjct: 62 YTRKKIRSMGRVSLMATRASELALEDAGLLGDPILTD---GRMGIAYGSSTGSTDPIGAF 118
Query: 197 ----LTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATA 252
L +G+ A Y ++ P + N+G + GL G S+AC +
Sbjct: 119 GTMLLEGSMSGITA---TTYVRMMPH---TTAVNVG-----LFFGLKGRVIPTSSACTSG 167
Query: 253 NYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDR 312
+ A I+ G +M+AGG E + PT F A S RN+ P+ RP+D +R
Sbjct: 168 SQGIGYAYEAIKYGYQTVMLAGGAE-ELCPTEAAVFDTLFATSTRNDAPELTPRPFDANR 226
Query: 313 DGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKS 372
DG V+GEG G LV+E LEHA RGA I AE +G D H+T P+++ + + + +
Sbjct: 227 DGLVIGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAHVTQPQAETMQI--AMELA 284
Query: 373 LEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGG 432
L+DAG++PE++ YVNAH T+T GD+AE A VF M ++ KS GH LGA G
Sbjct: 285 LKDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFGAR--MPISSLKSYFGHTLGACGA 342
Query: 433 LEAITTIKAITTGWLHPTLNQDNLEPEV-TIDTVPNVKKQHHVNVAISNSFGFGGHNSVV 491
LEA +I+ + GW PTLN ++P +D + ++ +SN+F FGG N+ +
Sbjct: 343 LEAWMSIEMMNEGWFAPTLNLTQVDPACGALDYIMGEAREIDTEYVMSNNFAFGGINTSL 402
Query: 492 VF 493
+F
Sbjct: 403 IF 404
|
Length = 405 |
| >gnl|CDD|238424 cd00828, elong_cond_enzymes, "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Score = 238 bits (610), Expect = 6e-74
Identities = 146/418 (34%), Positives = 213/418 (50%), Gaps = 25/418 (5%)
Query: 87 RIVITGMGLVSVFGSDIDK---FYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKG 143
R+VITG+G+VS G D+ F+ L EG SGI+P+ R S F GQI
Sbjct: 2 RVVITGIGVVSPHGEGCDEVEEFWEALREGRSGIAPVARLK-SRFDRGVAGQIPTGD--- 57
Query: 144 YIDGKNDRRLDDCWR---YCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSF 200
I G + +R R LVA AL +A ++ + GVVVGSGMGGL
Sbjct: 58 -IPGWDAKRTGIVDRTTLLALVATEEALADAGITDPYEVHPSEV--GVVVGSGMGGLRF- 113
Query: 201 TTGVEALIQKGYKKITPFFIPYSI--TNMGSALLAIDTGLM-GPNYSISTACATANYCFY 257
+ + + + P+ P + N + + I GP + ACATA
Sbjct: 114 ---LRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLSSHGPIKTPVGACATALEALD 170
Query: 258 AAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVM 317
A IR G+ DI+V GG E + G+ GF ALS E P+ SRP+D+ RDGFV
Sbjct: 171 LAVEAIRSGKADIVVVGGVED-PLEEGLSGFANMGALSTAEEEPEEMSRPFDETRDGFVE 229
Query: 318 GEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAG 377
EG G+LV+E E A+ RGA I G A T D + P + G G++ I +L AG
Sbjct: 230 AEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVP-AGGKGIARAIRTALAKAG 288
Query: 378 VSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAI 436
+S ++++ ++AH TST A D+AE AI +V + + + K++ GH GAAG L+ I
Sbjct: 289 LSLDDLDVISAHGTSTPANDVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLI 348
Query: 437 TTIKAITTGWLHPTLNQDNLEPEVTIDTVPNV--KKQHHVNVAISNSFGFGGHNSVVV 492
++++ G + PT N D+++P+V +V + V A+ N+FGFGG N+ +V
Sbjct: 349 GALQSLEHGLIPPTANLDDVDPDVEHLSVVGLSRDLNLKVRAALVNAFGFGGSNAALV 406
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. Length = 407 |
| >gnl|CDD|173154 PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Score = 232 bits (592), Expect = 4e-72
Identities = 132/339 (38%), Positives = 194/339 (57%), Gaps = 8/339 (2%)
Query: 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKIT 216
WRY + +L A + E +RT ++G+G+GG + V +G K+++
Sbjct: 5 WRYKWITFHPSLTHADNT----EKQERT--ATIIGAGIGGFPAIAHAVRTSDSRGPKRLS 58
Query: 217 PFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGT 276
PF +P + N+ + ++I GP + TACA A IR E D+ + GG
Sbjct: 59 PFTVPSFLVNLAAGHVSIKHHFKGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGA 118
Query: 277 EAAIIPTGVGGFIACRALSQR-NEYPKRASRPWDKDRDGFVMGEGCGILVMESLEHAMKR 335
EA I + GF A RALS N P++ASRP+D RDGFVMGEG G+L++E LEHA+ R
Sbjct: 119 EAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARDGFVMGEGAGLLIIEELEHALAR 178
Query: 336 GANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLA 395
GA +AE +G + DA+HMT DG G + +L AG++PE+V ++NAHATST
Sbjct: 179 GAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQVQHLNAHATSTPV 238
Query: 396 GDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDN 455
GDL E+NAIK +F +++ + + TKS GH LGAAGGLE I T+ A+ + TLN +N
Sbjct: 239 GDLGEINAIKHLFGESNALAITSTKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLEN 298
Query: 456 LEPEVT-IDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 493
+P ++ + + H + A+SN FGF G N+ ++
Sbjct: 299 PDPAAKGLNIIAGNAQPHDMTYALSNGFGFAGVNASILL 337
|
Length = 342 |
| >gnl|CDD|180839 PRK07103, PRK07103, polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Score = 227 bits (580), Expect = 2e-69
Identities = 132/424 (31%), Positives = 204/424 (48%), Gaps = 33/424 (7%)
Query: 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGI--------SPIDRFDASSFSVRFGGQI 136
+V+TG+G+VS G F LL G D A S G ++
Sbjct: 1 MDEVVVTGVGVVSAIGQGRPSFAAALLAGRHAFGVMRRPGRQVPDDAGAGLASAFIGAEL 60
Query: 137 RDFSSKGYIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGG 196
+ +D K RR + L A R A +A+L P +D RIG+VVG
Sbjct: 61 DSLALPERLDAKLLRRASLSAQAALAAAREAWRDAALGP-----VDPDRIGLVVGG---- 111
Query: 197 LTSFTTGVEALIQKGYKKITPFFIP--YSITNMGSALLAIDT---GLMGPNYSISTACAT 251
++ +AL+ + Y+ P F+ Y ++ M + L+ + + G+ G +++ A A+
Sbjct: 112 -SNLQQREQALVHETYRD-RPAFLRPSYGLSFMDTDLVGLCSEQFGIRGEGFTVGGASAS 169
Query: 252 ANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRAL-SQRN-EYPKRASRPWD 309
AA ++ G D +A G + + A+ S R + P+ A RP+D
Sbjct: 170 GQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFD 229
Query: 310 KDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCI 369
+DRDGF+ GE CG +V+ES E A +RGA A+ LG ++ DA+ DP G I
Sbjct: 230 QDRDGFIYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPDP--SLEGEMRVI 287
Query: 370 AKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGA 429
+L AG+ PE+++YVN H T + GD E+ A+ + +N TKS+ GHGL A
Sbjct: 288 RAALRRAGLGPEDIDYVNPHGTGSPLGDETELAALFASG--LAHAWINATKSLTGHGLSA 345
Query: 430 AGGLEAITTIKAITTGWLHPTLNQDNLEP-EVTIDTVPNVKKQHHVNVAISNSFGFGGHN 488
AG +E I T+ + G+LHP+ N D EP + V + + + A+S SFGFGG N
Sbjct: 346 AGIVELIATLLQMRAGFLHPSRNLD--EPIDERFRWVGSTAESARIRYALSLSFGFGGIN 403
Query: 489 SVVV 492
+ +V
Sbjct: 404 TALV 407
|
Length = 410 |
| >gnl|CDD|215723 pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Score = 200 bits (512), Expect = 2e-61
Identities = 80/252 (31%), Positives = 117/252 (46%), Gaps = 13/252 (5%)
Query: 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDR-FDASSFSVRFGGQIRDFSSKG 143
+ + ITGMG G ++F+ LL G I R G+I F
Sbjct: 1 AEPVAITGMGCRFPGGVGPEEFWELLLAGRDAIREFPADLSGLYPPSRVAGEIYGFDFDA 60
Query: 144 YIDGKNDR---RLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSF 200
G + R +D R L A ALE+A L P L DRT GV VGSG G
Sbjct: 61 AFFGISPREAEAMDPQQRLALEAAWEALEDAGLDPASLRGSDRT--GVFVGSGSGDYAEL 118
Query: 201 TTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAA 260
G ++++P+ + ++ + ++ GL GP+ ++ TAC+++ +AA
Sbjct: 119 ---QALDSAGGPRRVSPYLTGAWMPSVAAGRISYRLGLRGPSVTVDTACSSSLVALHAAV 175
Query: 261 NHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEG 320
IRRGE D+ +AGG EA + P G GF A AL + P +A P+ DGFV GEG
Sbjct: 176 RSIRRGECDLALAGGVEAPLTPGGFAGFSAAGALLSPDG-PCKAFDPFA---DGFVRGEG 231
Query: 321 CGILVMESLEHA 332
G ++++ L A
Sbjct: 232 VGAVLLKELSEA 243
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. The N-terminal domain contains most of the structures involved in dimer formation and also the active site cysteine. Length = 243 |
| >gnl|CDD|238429 cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Score = 201 bits (514), Expect = 2e-59
Identities = 124/438 (28%), Positives = 190/438 (43%), Gaps = 51/438 (11%)
Query: 87 RIVITGMGLVSVF--GSDIDKFYNKLLEGESGISPI--DRFDASSFSVRFGGQIRDFSSK 142
I I GM F +D D+F+ LLEG IS I DR+DA + G + ++ +
Sbjct: 2 PIAIVGMACR--FPGAADPDEFWENLLEGRDAISEIPEDRWDADGYYPDPGKPGKTYTRR 59
Query: 143 -GYIDGKND-------------RRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGV 188
G++D + +D R L ALE+A SP+ L +R GV
Sbjct: 60 GGFLDDVDAFDAAFFGISPREAEAMDPQQRLLLEVAWEALEDAGYSPESL---AGSRTGV 116
Query: 189 VVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTA 248
VG+ L+ + +I + + + ++ L GP+ ++ TA
Sbjct: 117 FVGASSSDY-------LELLARDPDEIDAYAATGTSRAFLANRISYFFDLRGPSLTVDTA 169
Query: 249 CATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPW 308
C+++ + A +R GE D+ + GG + P GF LS P RP+
Sbjct: 170 CSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLS-----PDGRCRPF 224
Query: 309 DKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAH--HMTDPRSDGLGVS 366
D D DG+V GEG G++V++ L A++ G I A G AV D +T P + +
Sbjct: 225 DADADGYVRGEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQ--A 282
Query: 367 SCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNG----TKSM 422
+ I ++ AGV P +++YV AH T T GD EV A+ KVF + KS
Sbjct: 283 ALIRRAYARAGVDPSDIDYVEAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSN 342
Query: 423 IGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNV--------KKQHHV 474
IGH AAG I + A+ G + P L+ + P++ + P
Sbjct: 343 IGHLEAAAGLAGLIKVVLALEHGVIPPNLHFETPNPKIDFEESPLRVPTEARPWPAPAGP 402
Query: 475 NVAISNSFGFGGHNSVVV 492
A +SFGFGG N+ V+
Sbjct: 403 RRAGVSSFGFGGTNAHVI 420
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. Length = 421 |
| >gnl|CDD|235653 PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 188 bits (479), Expect = 5e-55
Identities = 129/415 (31%), Positives = 199/415 (47%), Gaps = 44/415 (10%)
Query: 87 RIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYID 146
++V+TG+GLVS G D+++ + +LL+G+SGI F G I
Sbjct: 3 KVVVTGIGLVSALG-DLEQSWQRLLQGKSGIKLHQPF--PELPPLPLGLI---------- 49
Query: 147 GKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEA 206
G L+D + + A AL++A L+P + T GVV+GS G E
Sbjct: 50 GNQPSSLEDLTKTVVTA---ALKDAGLTPPL------TDCGVVIGSSRG----CQGQWEK 96
Query: 207 LIQKGYKKITPFFIPYSITN-------MGSALLAIDTGLMGPNYSISTACATANYCFYAA 259
L ++ Y+ + N + A G GP + ACAT +
Sbjct: 97 LARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQGPVLAPMAACATGLWAIAQG 156
Query: 260 ANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGE 319
I+ G+ ++AG EA I P + GF AL++ YP +D+ R+G V+GE
Sbjct: 157 VELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTGAYP------FDRQREGLVLGE 210
Query: 320 GCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVS 379
G ILV+ES E A KRGA I + LG +TCDA+HM+ P DG + I + L +G++
Sbjct: 211 GGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLT 270
Query: 380 PEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTI 439
PE+++Y++AH T+T D E N I+ +F + ++ TK GH LGA+G L ++
Sbjct: 271 PEDIDYIHAHGTATRLNDQREANLIQALF--PHRVAVSSTKGATGHTLGASGALGVAFSL 328
Query: 440 KAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494
A+ L P + EPE ++ V +Q + + SFGFGG N+ +
Sbjct: 329 LALRHQQLPPCVGLQ--EPEFDLNFVRQ-AQQSPLQNVLCLSFGFGGQNAAIALG 380
|
Length = 381 |
| >gnl|CDD|238428 cd00832, CLF, Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Score = 174 bits (443), Expect = 2e-49
Identities = 125/410 (30%), Positives = 201/410 (49%), Gaps = 15/410 (3%)
Query: 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYI 145
+R V+TG+G+V+ G +++++ +L+G SG+ PI RFD S + R G++ DF + ++
Sbjct: 1 RRAVVTGIGVVAPNGLGVEEYWKAVLDGRSGLGPITRFDPSGYPARLAGEVPDFDAAEHL 60
Query: 146 DGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVE 205
G+ + D R L A AL +A + P L D +GVV S GG ++
Sbjct: 61 PGRLLPQTDRMTRLALAAADWALADAGVDPAALPPYD---MGVVTASAAGGFEFGQRELQ 117
Query: 206 ALIQKGYKKITPF--FIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHI 263
L KG + ++ + F + N G ++I G+ GP+ + A A +
Sbjct: 118 KLWSKGPRHVSAYQSFAWFYAVNTGQ--ISIRHGMRGPSGVVVAEQAGGLDALAQARRLV 175
Query: 264 RRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGI 323
RRG T ++V+GG ++A+ P G ++ LS ++ P RA P+D G+V GEG I
Sbjct: 176 RRG-TPLVVSGGVDSALCPWGWVAQLSSGRLSTSDD-PARAYLPFDAAAAGYVPGEGGAI 233
Query: 324 LVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSD-GLGVSSCIAKSLEDAGVSPEE 382
LV+E A +RGA + E G A T D P S G++ I +L DAG++PE+
Sbjct: 234 LVLEDAAAARERGARVYGEIAGYAATFDP----PPGSGRPPGLARAIRLALADAGLTPED 289
Query: 383 VNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAI 442
V+ V A A D AE A+ VF + + K+M G L+ T + A+
Sbjct: 290 VDVVFADAAGVPELDRAEAAALAAVF-GPRGVPVTAPKTMTGRLYAGGAPLDVATALLAL 348
Query: 443 TTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVV 492
G + PT+N ++ P +D V + + A+ + G GG NS +V
Sbjct: 349 RDGVIPPTVNVTDVPPAYGLDLVTGRPRPAALRTALVLARGRGGFNSALV 398
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. Length = 399 |
| >gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 168 bits (427), Expect = 5e-48
Identities = 103/336 (30%), Positives = 167/336 (49%), Gaps = 18/336 (5%)
Query: 158 RYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITP 217
A RA+ +A LS + +N +GVVVG+G G G +A+ G +T
Sbjct: 13 ILGFEAAERAIADAGLSREYQKN---PIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTK 69
Query: 218 FFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTE 277
P + S +A G+ GP Y +S ACA + + AA+ ++ G+ DI++AGG+E
Sbjct: 70 AMFPGA-----SGQIATPLGIHGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSE 124
Query: 278 AAIIPTGVGGFIACRALSQ-RNEYPKRASRPWDKDRDGFVMGEGCGILVMESLEHAMKRG 336
P + C + P++ASR +D DGFV G+G G LV+E LEHA+ RG
Sbjct: 125 ELAAP------MDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALVVEELEHALARG 178
Query: 337 ANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAG 396
A+I AE +G A T D M G++ ++L AG++ +++Y+ AH T T G
Sbjct: 179 AHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIG 238
Query: 397 DLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNL 456
D+ E+ ++ F D S ++ TK+M G+ AA L + + G++ P+++ + L
Sbjct: 239 DVKELKLLRSEFGDKS-PAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEEL 297
Query: 457 EPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVV 492
+ + + A+ N FG GG N+ +V
Sbjct: 298 DEAG--LNIVTETTPRELRTALLNGFGLGGTNATLV 331
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). Length = 332 |
| >gnl|CDD|236398 PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Score = 156 bits (398), Expect = 4e-43
Identities = 95/321 (29%), Positives = 147/321 (45%), Gaps = 34/321 (10%)
Query: 183 RTRIGVVVGSGMGGLTSFTTGV----EALIQKGYKKITPFFIP---YSITNMGSA--LLA 233
RIGVV+G TS T+G+ A + Y+ +GS L
Sbjct: 94 ADRIGVVLG------TS-TSGILEGELAYRR--RDPAHGALPADYHYAQQELGSLADFLR 144
Query: 234 IDTGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRA 293
GL GP Y+ISTAC+++ F +A + G D + GG ++ + + GF + +
Sbjct: 145 AYLGLSGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDS-LCRLTLNGFNSLES 203
Query: 294 LSQRNEYPKRASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAH 353
LS + RP+ +RDG +GE ++E R + LG + DAH
Sbjct: 204 LS------PQPCRPFSANRDGINIGEAAAFFLLE-------REDDAAVALLGVGESSDAH 250
Query: 354 HMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSE 413
HM+ P +GLG + ++L DAG++P ++ Y+N H T+T D E A+ VF D
Sbjct: 251 HMSAPHPEGLGAILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGDGV- 309
Query: 414 MKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHH 473
+ TK + GH LGAAG +EA A+ G N +P + + +
Sbjct: 310 -PCSSTKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPLYLVENAQALA 368
Query: 474 VNVAISNSFGFGGHNSVVVFA 494
+ +SNSF FGG+N ++F
Sbjct: 369 IRYVLSNSFAFGGNNCSLIFG 389
|
Length = 392 |
| >gnl|CDD|225858 COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 150 bits (381), Expect = 9e-39
Identities = 118/426 (27%), Positives = 188/426 (44%), Gaps = 57/426 (13%)
Query: 102 DIDKFYNKLLEGESGISPI--DRFDASSFSVRFGGQIRDFSSK--GYIDGKND------- 150
++F++ L EG I+ + DR+D ++ S+ G++D +D
Sbjct: 20 SPEEFWDLLKEGRDEITEVPADRWDVDAYYDPDPTVPGKSYSRWGGFLDDVDDFDALFFG 79
Query: 151 ------RRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGV 204
+D R L ALE+A + P +++ + GV G+ +
Sbjct: 80 ISPREAEAMDPQQRLLLEVAWEALEDAGIYP---DSLRGSATGVFAGASV-------ADY 129
Query: 205 EALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIR 264
L+ + + I + +++ + ++ GL GP+ ++ TAC+++ + A +R
Sbjct: 130 LLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLSGPSVTVDTACSSSLVAVHLACQSLR 189
Query: 265 RGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324
GE D+ +AGG + P F A LS P + +D D DG+V GEG G++
Sbjct: 190 LGECDLALAGGVNLVLSPESSYLFSAGGMLS-----PDGRCKAFDADADGYVRGEGAGVV 244
Query: 325 VMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIA------KSLEDAGV 378
V++ L A + G I A G AV D RS+GL + A ++L DAG+
Sbjct: 245 VLKRLSDAERDGDRIYAVIRGSAV------NQDGRSNGLTAPNLEAQADVIREALADAGI 298
Query: 379 SPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMK--MNGT-KSMIGHGLGAAGGLEA 435
P V YV AH T T GD E NA+ V+ + + + G+ KS IGH AAG
Sbjct: 299 DPATVQYVEAHGTGTPLGDPIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGL 358
Query: 436 ITTIKAITTGWLHPTLNQDNLEPEVTID---------TVPNVKKQHHVNVAISNSFGFGG 486
I T A+ G++ PTL+ D PE+ D P +S SFGFGG
Sbjct: 359 IKTALALKHGYIPPTLHFDTPNPEIDFDSSPFVVPTEATPWPTGGGPRRAGVS-SFGFGG 417
Query: 487 HNSVVV 492
N+ V+
Sbjct: 418 TNAHVI 423
|
Length = 1061 |
| >gnl|CDD|217236 pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase, C-terminal domain | Back alignment and domain information |
|---|
Score = 129 bits (328), Expect = 3e-36
Identities = 45/118 (38%), Positives = 58/118 (49%), Gaps = 4/118 (3%)
Query: 341 AEYLGGAVTCD-AHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLA 399
A G AV D A H +G + I +L DAG+ PE+V+YV AH T T GD
Sbjct: 2 AVIRGSAVNQDGAAHNGLTAPNGPAQARAIRAALADAGLDPEDVDYVEAHGTGTPLGDPI 61
Query: 400 EVNAIKKVFKDTSE---MKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQD 454
E A+K VF + + + KS IGH AAG I + A+ G + PTLN D
Sbjct: 62 EAEALKAVFGPGRDSQPLPVGSVKSNIGHLEAAAGVAGLIKAVLALRHGVIPPTLNLD 119
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. Length = 119 |
| >gnl|CDD|234022 TIGR02813, omega_3_PfaA, polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Score = 106 bits (265), Expect = 5e-24
Identities = 101/379 (26%), Positives = 162/379 (42%), Gaps = 53/379 (13%)
Query: 161 LVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMG-----GLTSF-----------TTGV 204
LV + L +A L + DR +IG+ +G G G L + +GV
Sbjct: 98 LVVAKEVLNDAGLP----DGYDRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGV 153
Query: 205 E----ALIQKGYKKITPFF----IPYSITNMGSALLAIDTGLMGPNYSISTACATANYCF 256
E ++ K ++ + P S+ N+ S +A L G N + ACA +
Sbjct: 154 EDEDSEMLIKKFQDQYIHWEENSFPGSLGNVISGRIANRFDLGGMNCVVDAACAGSLAAI 213
Query: 257 YAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFV 316
A + + G +++M+ GG P F A + + +P+D D G +
Sbjct: 214 RMALSELLEGRSEMMITGGVCTDNSPFMYMSFSKTPAFTTNEDI-----QPFDIDSKGMM 268
Query: 317 MGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMT--DPRSDGLGVSSCIAKSLE 374
+GEG G++ ++ LE A + G I A G + D + PR +G + + ++ +
Sbjct: 269 IGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAPRPEGQ--AKALKRAYD 326
Query: 375 DAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMK----MNGTKSMIGHGLGAA 430
DAG +P + AH T T AGD+AE + VF ++ K + KS IGH A
Sbjct: 327 DAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTA 386
Query: 431 GGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVP---NVKKQHHV--------NVAIS 479
G I + A+ L PT+N D P++ I+ P N + + + IS
Sbjct: 387 GTAGMIKAVLALHHKVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGIS 446
Query: 480 NSFGFGGHNSVVVFAPFSP 498
SFGFGG N +V +SP
Sbjct: 447 -SFGFGGTNFHMVLEEYSP 464
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. Length = 2582 |
| >gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 99.4 bits (248), Expect = 1e-23
Identities = 72/253 (28%), Positives = 103/253 (40%), Gaps = 58/253 (22%)
Query: 240 GPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNE 299
GP YS++ ACAT A ++ G+ DI++AGG+E
Sbjct: 59 GPAYSVNQACATGLTALALAVQQVQNGKADIVLAGGSEE--------------------- 97
Query: 300 YPKRASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPR 359
FV G+G V+ES EHA++RGA+ AE + A T D M P
Sbjct: 98 ---------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMV-PA 141
Query: 360 SDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGT 419
G G++ K+LE AG++P +++YV AH T T GD E+ ++ T
Sbjct: 142 VSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGV-RSPAVSAT 200
Query: 420 KSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAIS 479
M GH LGAAG + + ++ PT P +
Sbjct: 201 LIMTGHPLGAAGLAILDELLLMLEHEFIPPT------------PREP--------RTVLL 240
Query: 480 NSFGFGGHNSVVV 492
FG GG N+ VV
Sbjct: 241 LGFGLGGTNAAVV 253
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254 |
| >gnl|CDD|214836 smart00825, PKS_KS, Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Score = 74.3 bits (184), Expect = 1e-14
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 237 GLMGPNYSIS--TACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRAL 294
G+ +YS++ TAC+++ + A +R GE D+ +AGG + P G L
Sbjct: 83 GVSSSDYSVTVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGLSRAGML 142
Query: 295 SQRNEYPKRASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAH 353
S P + +D DG+V GEG G++V++ L A++ G I+A G AV D
Sbjct: 143 S-----PDGRCKTFDASADGYVRGEGVGVVVLKRLSDALRDGDPILAVIRGSAVNQDGR 196
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. Length = 298 |
| >gnl|CDD|235819 PRK06519, PRK06519, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 1e-04
Identities = 43/181 (23%), Positives = 71/181 (39%), Gaps = 32/181 (17%)
Query: 259 AANHIRRGETDIMVAGGTEAA-----IIPTGVGGFIACRALSQRNEYPKRASRP-WDK-- 310
A I G++D + GG A ++ +GG + + + P W +
Sbjct: 185 AFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLL------KGGW-----APVWSRGG 233
Query: 311 -DRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCI 369
D GF++G G LV+ES EHA RGA A + G + A R+ G + + +
Sbjct: 234 EDGGGFILGSGGAFLVLESREHAEARGARPYAR-ISGVESDRA-----RRAPG-DLEASL 286
Query: 370 AKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGA 429
+ L+ AG V + AT E A++ + G ++ GH + A
Sbjct: 287 ERLLKPAGGLAAPT-AVISGATGAHPATAEEKAALEAALAGP----VRGIGTLFGHTMEA 341
Query: 430 A 430
Sbjct: 342 Q 342
|
Length = 398 |
| >gnl|CDD|214836 smart00825, PKS_KS, Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Score = 43.1 bits (103), Expect = 2e-04
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 14/84 (16%)
Query: 420 KSMIGHGLGAAG--GLEAITTIKAITTGWLHPTLNQDNLEP---------EVTIDTVPNV 468
KS IGH AAG GL I + A+ G + PTL+ + P V + P
Sbjct: 215 KSNIGHLEAAAGVAGL--IKVVLALKHGVIPPTLHFETPNPHIDLEESPLRVPTELTPWP 272
Query: 469 KKQHHVNVAISNSFGFGGHNSVVV 492
+ +SFGFGG N+ V+
Sbjct: 273 PPGRPRRAGV-SSFGFGGTNAHVI 295
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. Length = 298 |
| >gnl|CDD|238425 cd00829, SCP-x_thiolase, Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.004
Identities = 26/116 (22%), Positives = 37/116 (31%), Gaps = 32/116 (27%)
Query: 163 AGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPY 222
A R AL++A L P ++ VVVG+ GG G G
Sbjct: 23 AARAALDDAGLEPADID-------AVVVGNAAGGRFQSFPGALIAEYLGLLGK------- 68
Query: 223 SITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEA 278
P + A A+ + AAA I G D+++ G E
Sbjct: 69 ------------------PATRVEAAGASGSAAVRAAAAAIASGLADVVLVVGAEK 106
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. Length = 375 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 498 | |||
| KOG1394 | 440 | consensus 3-oxoacyl-(acyl-carrier-protein) synthas | 100.0 | |
| PLN02787 | 540 | 3-oxoacyl-[acyl-carrier-protein] synthase II | 100.0 | |
| PRK08722 | 414 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| COG0304 | 412 | FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li | 100.0 | |
| PRK06333 | 424 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK07910 | 418 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| cd00832 | 399 | CLF Chain-length factor (CLF) is a factor required | 100.0 | |
| PRK08439 | 406 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK09116 | 405 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK07967 | 406 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 100.0 | |
| PRK07314 | 411 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PLN02836 | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase | 100.0 | |
| TIGR03150 | 407 | fabF beta-ketoacyl-acyl-carrier-protein synthase I | 100.0 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 100.0 | |
| COG3321 | 1061 | Polyketide synthase modules and related proteins [ | 100.0 | |
| PTZ00050 | 421 | 3-oxoacyl-acyl carrier protein synthase; Provision | 100.0 | |
| cd00834 | 406 | KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) | 100.0 | |
| cd00828 | 407 | elong_cond_enzymes "elongating" condensing enzymes | 100.0 | |
| PRK07103 | 410 | polyketide beta-ketoacyl:acyl carrier protein synt | 100.0 | |
| PRK05952 | 381 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK06501 | 425 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK14691 | 342 | 3-oxoacyl-(acyl carrier protein) synthase II; Prov | 100.0 | |
| PRK09185 | 392 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 100.0 | |
| smart00825 | 424 | PKS_KS Beta-ketoacyl synthase. The structure of be | 100.0 | |
| PRK06519 | 398 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| cd00833 | 421 | PKS polyketide synthases (PKSs) polymerize simple | 100.0 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 100.0 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 100.0 | |
| PRK06147 | 348 | 3-oxoacyl-(acyl carrier protein) synthase; Validat | 100.0 | |
| PF00109 | 254 | ketoacyl-synt: Beta-ketoacyl synthase, N-terminal | 100.0 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 100.0 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.96 | |
| PRK06633 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.95 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 99.94 | |
| PRK09052 | 399 | acetyl-CoA acetyltransferase; Provisional | 99.94 | |
| PRK13359 | 400 | beta-ketoadipyl CoA thiolase; Provisional | 99.94 | |
| cd00751 | 386 | thiolase Thiolase are ubiquitous enzymes that cata | 99.94 | |
| PRK07661 | 391 | acetyl-CoA acetyltransferase; Provisional | 99.94 | |
| PRK05790 | 393 | putative acyltransferase; Provisional | 99.93 | |
| PF02801 | 119 | Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina | 99.93 | |
| PRK08242 | 402 | acetyl-CoA acetyltransferase; Validated | 99.93 | |
| PRK06064 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.93 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 99.93 | |
| PLN02287 | 452 | 3-ketoacyl-CoA thiolase | 99.93 | |
| TIGR02430 | 400 | pcaF beta-ketoadipyl CoA thiolase. Members of this | 99.93 | |
| PRK07108 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.93 | |
| PRK07851 | 406 | acetyl-CoA acetyltransferase; Provisional | 99.93 | |
| PRK06445 | 394 | acetyl-CoA acetyltransferase; Provisional | 99.92 | |
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 99.92 | |
| PRK08131 | 401 | acetyl-CoA acetyltransferase; Provisional | 99.92 | |
| PRK06954 | 397 | acetyl-CoA acetyltransferase; Provisional | 99.92 | |
| PRK08235 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.92 | |
| PRK09050 | 401 | beta-ketoadipyl CoA thiolase; Validated | 99.92 | |
| PRK07850 | 387 | acetyl-CoA acetyltransferase; Provisional | 99.92 | |
| PLN02644 | 394 | acetyl-CoA C-acetyltransferase | 99.92 | |
| PRK06366 | 388 | acetyl-CoA acetyltransferase; Provisional | 99.91 | |
| TIGR02445 | 385 | fadA fatty oxidation complex, beta subunit FadA. T | 99.91 | |
| PRK08947 | 387 | fadA 3-ketoacyl-CoA thiolase; Reviewed | 99.91 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 99.91 | |
| PRK06158 | 384 | thiolase; Provisional | 99.9 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 99.9 | |
| PRK08963 | 428 | fadI 3-ketoacyl-CoA thiolase; Reviewed | 99.9 | |
| PRK07801 | 382 | acetyl-CoA acetyltransferase; Provisional | 99.9 | |
| PRK07516 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.9 | |
| PRK06504 | 390 | acetyl-CoA acetyltransferase; Provisional | 99.9 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 99.9 | |
| cd00829 | 375 | SCP-x_thiolase Thiolase domain associated with ste | 99.9 | |
| PTZ00455 | 438 | 3-ketoacyl-CoA thiolase; Provisional | 99.89 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 99.89 | |
| PRK08256 | 391 | lipid-transfer protein; Provisional | 99.89 | |
| TIGR02446 | 430 | FadI fatty oxidation complex, beta subunit FadI. T | 99.89 | |
| PRK06025 | 417 | acetyl-CoA acetyltransferase; Provisional | 99.88 | |
| PRK09268 | 427 | acetyl-CoA acetyltransferase; Provisional | 99.88 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 99.87 | |
| PRK06690 | 361 | acetyl-CoA acetyltransferase; Provisional | 99.87 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.86 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 99.86 | |
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.86 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 99.85 | |
| PRK06289 | 403 | acetyl-CoA acetyltransferase; Provisional | 99.84 | |
| cd00826 | 393 | nondecarbox_cond_enzymes nondecarboxylating conden | 99.84 | |
| PRK06066 | 385 | acetyl-CoA acetyltransferase; Provisional | 99.84 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.8 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 99.79 | |
| KOG1390 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 99.79 | |
| KOG1406 | 408 | consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44 | 99.78 | |
| PRK09352 | 319 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.77 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 99.75 | |
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 99.74 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 99.73 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.72 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 99.72 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.7 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.7 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 99.69 | |
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 99.64 | |
| KOG1389 | 435 | consensus 3-oxoacyl CoA thiolase [Lipid transport | 99.64 | |
| KOG1391 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 99.63 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 99.63 | |
| PRK06840 | 339 | hypothetical protein; Validated | 99.61 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.54 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 99.53 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 99.52 | |
| cd00827 | 324 | init_cond_enzymes "initiating" condensing enzymes | 99.51 | |
| PRK12880 | 353 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.46 | |
| KOG1392 | 465 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 99.46 | |
| PLN03172 | 393 | chalcone synthase family protein; Provisional | 99.41 | |
| COG0183 | 392 | PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis | 99.4 | |
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 99.4 | |
| PLN03171 | 399 | chalcone synthase-like protein; Provisional | 99.35 | |
| PLN03169 | 391 | chalcone synthase family protein; Provisional | 99.35 | |
| PLN03170 | 401 | chalcone synthase; Provisional | 99.33 | |
| TIGR02845 | 327 | spore_V_AD stage V sporulation protein AD. Bacillu | 99.28 | |
| PLN03173 | 391 | chalcone synthase; Provisional | 99.25 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 99.2 | |
| TIGR01835 | 379 | HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt | 99.17 | |
| PF00108 | 264 | Thiolase_N: Thiolase, N-terminal domain; InterPro: | 99.16 | |
| COG3425 | 377 | PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi | 99.12 | |
| PF02803 | 123 | Thiolase_C: Thiolase, C-terminal domain; InterPro: | 99.08 | |
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 99.08 | |
| PLN02854 | 521 | 3-ketoacyl-CoA synthase | 99.06 | |
| PLN02577 | 459 | hydroxymethylglutaryl-CoA synthase | 98.99 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 98.97 | |
| PF13723 | 218 | Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina | 98.93 | |
| PRK12404 | 334 | stage V sporulation protein AD; Provisional | 98.87 | |
| TIGR01833 | 454 | HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth | 98.85 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 98.66 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 98.49 | |
| COG3424 | 356 | BcsA Predicted naringenin-chalcone synthase [Secon | 98.33 | |
| PLN00415 | 466 | 3-ketoacyl-CoA synthase | 98.23 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 98.19 | |
| PF08545 | 80 | ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) | 98.1 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 97.86 | |
| PF07451 | 329 | SpoVAD: Stage V sporulation protein AD (SpoVAD); I | 97.67 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 97.38 | |
| PF01154 | 174 | HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s | 96.63 | |
| PF08541 | 90 | ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC | 96.58 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 83.15 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 80.09 |
| >KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-95 Score=687.66 Aligned_cols=413 Identities=48% Similarity=0.785 Sum_probs=397.9
Q ss_pred CCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHH
Q 010896 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAG 164 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa 164 (498)
++||||||||+++|+|++++++|++|.+|+++|+.++.++...+|+.+.|+|+.|+.+.|++....++|+++..|++.++
T Consensus 23 ~rRVVITGmG~VTplG~~v~~~w~~Ll~GesGI~~l~~~d~k~~p~~v~g~Ip~f~~e~~~s~~~~r~ms~~~~~al~aa 102 (440)
T KOG1394|consen 23 MRRVVITGMGAVTPLGNGVHTSWRNLLSGESGISSLEGPDYKSIPFTVAGKIPRFSVEDYVSKGDERRMSKFTKLALTAA 102 (440)
T ss_pred ceeEEEeccceeecCCCChHHHHHHhhccccCcccccccccccCcchheeeccccccccccchhhhhhhhHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCCCccc
Q 010896 165 RRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYS 244 (498)
Q Consensus 165 ~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~Gp~~t 244 (498)
.+||+|++|.+...+..|..++||.+|++++++..+.+....+.++++++++||++|..+.|+.+++|++.+||+||+.+
T Consensus 103 ~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~~gl~Gpnhs 182 (440)
T KOG1394|consen 103 EEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMKYGLRGPNHS 182 (440)
T ss_pred HHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhhhhcCcCCchh
Confidence 99999999987667788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeEEE
Q 010896 245 ISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324 (498)
Q Consensus 245 v~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaaav 324 (498)
++|+|++|..+|..|++.|+.|++|++|+||+|..++|..+.+|.+++.||++|++|...+||||.+|||||+|||+|++
T Consensus 183 vSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~~RdGFVmGEGagvl 262 (440)
T KOG1394|consen 183 VSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDKKRDGFVMGEGAGVL 262 (440)
T ss_pred hHhhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCccCCCceeeccceeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHH
Q 010896 325 VMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAI 404 (498)
Q Consensus 325 vLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al 404 (498)
|||++|+|++||++|||++.|++.++|.+|++.|+|+|.+...||++||++|||.|+|||||++|+|+|++||..|.+|+
T Consensus 263 vlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG~Ga~~am~raL~~Agl~pe~i~YvNAHATST~~GD~aE~~Ai 342 (440)
T KOG1394|consen 263 VLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDGAGAVLAMERALKDAGLSPEDIDYVNAHATSTPLGDAAEAEAI 342 (440)
T ss_pred ehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCcchHHHHHHHHHHHcCCChhhcCeeecccccCcCchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCc-ccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCccc----ccCccEEEE
Q 010896 405 KKVFKDTSE-MKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKK----QHHVNVAIS 479 (498)
Q Consensus 405 ~~~f~~~~~-~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~----~~~~~~alv 479 (498)
+++|++... .+|+|.|+++||++||+|.++.|.++++++++++|||+|+++|++.++++++|.... ..++|+++.
T Consensus 343 ~~vf~~~~~~~~vsStKgaiGHLLGAAGavEAi~Tv~ai~~~~lpptlNlen~d~~~d~~~~~~~~~~~~~~~~~~vals 422 (440)
T KOG1394|consen 343 KRVFGEHNIASKVSSTKGAIGHLLGAAGAVEAIFTVLAINDGVLPPTLNLENPDPGVDLDYVPLKASEKKGGNKVRVALS 422 (440)
T ss_pred HHHhccCCcccccccccchhhhhcccccchhhHhhhhhhhcCccCCcccccCCCccccccccccccccccccccceEEEe
Confidence 999998433 389999999999999999999999999999999999999999999999998765443 256789999
Q ss_pred EccccccceeeEEEeeCC
Q 010896 480 NSFGFGGHNSVVVFAPFS 497 (498)
Q Consensus 480 ~s~G~gG~n~~~vl~~~~ 497 (498)
|||||||+|+++++++|.
T Consensus 423 NSFGFGGtNaSl~fa~~~ 440 (440)
T KOG1394|consen 423 NSFGFGGTNASLCFAKFK 440 (440)
T ss_pred cccccCCcchhheeeecC
Confidence 999999999999999874
|
|
| >PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-85 Score=688.83 Aligned_cols=412 Identities=57% Similarity=1.006 Sum_probs=386.2
Q ss_pred CCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHH
Q 010896 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAG 164 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa 164 (498)
.++|||||||+++|+|.++++||++|++|+++|+++++|+...++.+++|++++|+++.++++++.++||+++++++.++
T Consensus 128 ~~rVvITG~G~vtp~G~~~~~~w~~L~~G~s~i~~~~~f~~~~~~~~~ag~i~~f~~~~~l~~k~~r~md~~~~~al~Aa 207 (540)
T PLN02787 128 QRRVVVTGMGVVSPLGHDPDVFYNNLLEGVSGISEIERFDCSQFPTRIAGEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 207 (540)
T ss_pred CCCEEEEeeEEECCCCCCHHHHHHHHHcCCCcccccCccchhhCCccccccccccChhhcCCHHHHHhCCHHHHHHHHHH
Confidence 46999999999999999999999999999999999999999999999999999999988899999999999999999999
Q ss_pred HHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCCCccc
Q 010896 165 RRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYS 244 (498)
Q Consensus 165 ~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~Gp~~t 244 (498)
++||+|||++++..+.++..|+||++|++.+++..+.+.++.+ ....++++|+.++..+.|+.+++|++.||++||+++
T Consensus 208 ~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~ia~~~gl~Gp~~t 286 (540)
T PLN02787 208 KKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEAL-RISYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYS 286 (540)
T ss_pred HHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHH-hhccccCCcchhhhhcccHHHHHHHHHhCCCCCccc
Confidence 9999999995433345677899999999999988777766654 355678899999999999999999999999999999
Q ss_pred cccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeEEE
Q 010896 245 ISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324 (498)
Q Consensus 245 v~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaaav 324 (498)
|+++|+|++.||..|+++|++|++|+|||||+|..++|..+.+|..+++|+.++++|++.|||||.+++||++|||++++
T Consensus 287 istACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~rdGfv~GEGAa~l 366 (540)
T PLN02787 287 ISTACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMNRDGFVMGEGAGVL 366 (540)
T ss_pred cccccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccCCCCcccccceEEE
Confidence 99999999999999999999999999999999998999999999999999988888999999999999999999999999
Q ss_pred EEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHH
Q 010896 325 VMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAI 404 (498)
Q Consensus 325 vLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al 404 (498)
|||++++|++||++||++|+|++.++|++|++.|+|++.++.++|++||++|||+|+|||||++|||||+.||..|.++|
T Consensus 367 VLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p~p~g~g~~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~Ai 446 (540)
T PLN02787 367 LLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQAL 446 (540)
T ss_pred EEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHHHCcEEEccCccCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCC-CcccccCccEEEEEccc
Q 010896 405 KKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVP-NVKKQHHVNVAISNSFG 483 (498)
Q Consensus 405 ~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~-~~~~~~~~~~alv~s~G 483 (498)
+++|+....++|+|+|+++||+++|||++++++++++|++|+|||++|+++|++.+++++++ ...++.+++++++||||
T Consensus 447 ~~~Fg~~~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~~g~iPPt~n~~~pd~~~~~~~~v~~~~~~~~ir~aL~nSfG 526 (540)
T PLN02787 447 MRCFGQNPELRVNSTKSMIGHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESGVDTKVLVGPKKERLDIKVALSNSFG 526 (540)
T ss_pred HHHhCCCCCceeeCCCCCcCCCcccchHHHHHHHHHHHhcCCcCCCCCCCCCCccCCcccccccccccCCcCEEEEeeec
Confidence 99999755689999999999999999999999999999999999999999999999988854 34445678999999999
Q ss_pred cccceeeEEEeeCC
Q 010896 484 FGGHNSVVVFAPFS 497 (498)
Q Consensus 484 ~gG~n~~~vl~~~~ 497 (498)
|||+|+++||++|+
T Consensus 527 FGG~Naslvl~~~~ 540 (540)
T PLN02787 527 FGGHNSSILFAPYK 540 (540)
T ss_pred CCceeEEEEEEeCC
Confidence 99999999999974
|
|
| >PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-83 Score=663.95 Aligned_cols=408 Identities=45% Similarity=0.781 Sum_probs=386.4
Q ss_pred CcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHHH
Q 010896 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGR 165 (498)
Q Consensus 86 ~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa~ 165 (498)
++|||||||+++|.|.++++||++|++|+++|+++++|+...++.+++|.+++||+++|+++++.++||+++++++.+++
T Consensus 4 ~~VvItG~g~~~p~g~~~~~~w~~L~~g~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~d~~~~~~l~a~~ 83 (414)
T PRK08722 4 RRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKDFNCEEYMSKKDARKMDLFIQYGIAAGI 83 (414)
T ss_pred CCEEEEeeEEECCCCCCHHHHHHHHHhCCCeeeecCccccccCCCceeEEcCCCChhHcCCHHHHhhcCHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999998898899999999999888999999999999999999999
Q ss_pred HHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCCCcccc
Q 010896 166 RALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSI 245 (498)
Q Consensus 166 ~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~Gp~~tv 245 (498)
+||+|||+ .....+..|+||++|++.+++.....++..+.+++.+.++|+.++..+.|.++++|++.||++||+++|
T Consensus 84 ~Al~dAGl---~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl~Gp~~ti 160 (414)
T PRK08722 84 QALDDSGL---EVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAI 160 (414)
T ss_pred HHHHHcCC---CccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCCCCCcccc
Confidence 99999999 334456789999999999999888888887877778889999999999999999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeEEEE
Q 010896 246 STACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILV 325 (498)
Q Consensus 246 ~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaaavv 325 (498)
+++|+|++.||+.|+++|++|+||+|||||+|..++|..+.+|..+++|+.++++|++.|||||.+++|+++|||++++|
T Consensus 161 ~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~G~~~gEGaaalv 240 (414)
T PRK08722 161 STACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAGMMV 240 (414)
T ss_pred ccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCCCCceEeeceEEEEE
Confidence 99999999999999999999999999999999999999999999999999877889999999999999999999999999
Q ss_pred EcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHH
Q 010896 326 MESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIK 405 (498)
Q Consensus 326 Le~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~ 405 (498)
||++++|+++|++||++|+|++.++|+++++.|++++++..++|++||+++||+|+||||||+|||||+.+|.+|.++|+
T Consensus 241 Le~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~al~ 320 (414)
T PRK08722 241 LEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIK 320 (414)
T ss_pred EccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEccCccCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcC--CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccc-cCccEEEEEcc
Q 010896 406 KVFKD--TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQ-HHVNVAISNSF 482 (498)
Q Consensus 406 ~~f~~--~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~-~~~~~alv~s~ 482 (498)
++|+. ..+++++++|+++||+++|||++++++++++|++|+|||++|+++|+|.+++++++.+.+. ..+|++++|||
T Consensus 321 ~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~v~~~~~~~~~~~~~l~nsf 400 (414)
T PRK08722 321 RALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLDIDLVPHTARKVESMEYAICNSF 400 (414)
T ss_pred HHhcccCCCCceeeCcccccccchHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCCccccCCCCCEEEEecc
Confidence 99986 2468999999999999999999999999999999999999999999999999998876655 36899999999
Q ss_pred ccccceeeEEEeeC
Q 010896 483 GFGGHNSVVVFAPF 496 (498)
Q Consensus 483 G~gG~n~~~vl~~~ 496 (498)
||||+|+|+||++.
T Consensus 401 GfGG~n~~lvl~~~ 414 (414)
T PRK08722 401 GFGGTNGSLIFKKM 414 (414)
T ss_pred cCCCceEEEEEecC
Confidence 99999999999873
|
|
| >COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-83 Score=648.05 Aligned_cols=408 Identities=47% Similarity=0.795 Sum_probs=383.3
Q ss_pred CCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHH
Q 010896 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAG 164 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa 164 (498)
+++|||||+|+++|+|.+.+++|++|+.|++++.++++|+...+++++++.+++| ..++.+++.++||+.++|++.++
T Consensus 2 ~~rvviTG~g~vs~lG~~~~~~~~~l~~g~sgi~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~d~~~~~a~~Aa 79 (412)
T COG0304 2 MRRVVITGLGIVSSLGNGVEEVWAALLAGKSGIRPITRFDASGLGVKIAGEIKDL--DDQIAKKERRFMDRFSQLAVVAA 79 (412)
T ss_pred CceEEEecceeeecccCCHHHHHHHHhcCCCCCCccccccccCCCCccccccccc--ccccchHHhhcccHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999999988 44577888889999999999999
Q ss_pred HHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCC-cCCccccchhhhhhHHHHHHhhcCCCCcc
Q 010896 165 RRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKK-ITPFFIPYSITNMGSALLAIDTGLMGPNY 243 (498)
Q Consensus 165 ~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~n~~a~~ia~~lgl~Gp~~ 243 (498)
.+||+|||++. ....+. |+||++|++.+++..++.....+..++.++ ++|+.++..+.|+.++.+++.+|++||++
T Consensus 80 ~eAl~dAgl~~--~~~~~~-r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~g~~G~~~ 156 (412)
T COG0304 80 VEALEDAGLDN--ELNVDM-RVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVFGLKGPNY 156 (412)
T ss_pred HHHHHHcCCCc--ccccCc-cEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHHhCCCCCcC
Confidence 99999999951 223334 999999999999998876555566666665 89999999999999999999999999999
Q ss_pred ccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeEE
Q 010896 244 SISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGI 323 (498)
Q Consensus 244 tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaaa 323 (498)
+++++|+||.+||..|+++|+.|++|+|||||+|..+++..+.+|..+++|++++++|+..|||||++|+||++|||+|+
T Consensus 157 ~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~~RdGfv~gEGag~ 236 (412)
T COG0304 157 TPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKNRDGFVIGEGAGA 236 (412)
T ss_pred ChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCCCCCCEEEecceeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHH
Q 010896 324 LVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNA 403 (498)
Q Consensus 324 vvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~a 403 (498)
+|||++|+|++||++||++|.|++.++|++|++.|.|++.+..++|++||++||++++|||||++|||||+.||..|..+
T Consensus 237 lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~p~g~Ga~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~a 316 (412)
T COG0304 237 LVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLA 316 (412)
T ss_pred EEecChhhHHhCCCceEEEEEEEEecccccccCCCCCCCchHHHHHHHHHHHcCCCHhHCCEEeCCCccCCCccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCC-CCcCcCCCcccccCccEEEEEc
Q 010896 404 IKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPE-VTIDTVPNVKKQHHVNVAISNS 481 (498)
Q Consensus 404 l~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~-~~~~~v~~~~~~~~~~~alv~s 481 (498)
++++|++ ...++|+|.|+++||++||+|+++++.++++|++|++||++|+++++|+ +++++++...+...++++++||
T Consensus 317 i~~vfg~~~~~~~vsstKs~tGH~lGAaGaveai~~~l~l~~g~ippt~n~~~~dp~~~~l~~v~~~~~~~~~~~~lsns 396 (412)
T COG0304 317 IKRVFGEHAKSLPVSSTKSLTGHTLGAAGAVEAIISLLALRDGIIPPTINLDNPDPEAADLDVVPNEARTGAVRAALSNS 396 (412)
T ss_pred HHHHhcccccCceeeecccccccChhhHHHHHHHHHHHHHhcCCcCCCCCcCCCCcccccccccCCcccccceeEEEecc
Confidence 9999997 3458899999999999999999999999999999999999999999997 6789999877766699999999
Q ss_pred cccccceeeEEEeeCC
Q 010896 482 FGFGGHNSVVVFAPFS 497 (498)
Q Consensus 482 ~G~gG~n~~~vl~~~~ 497 (498)
|||||+|+++|+++|+
T Consensus 397 fGFGG~Na~lv~~~~~ 412 (412)
T COG0304 397 FGFGGTNASLVFKRYQ 412 (412)
T ss_pred cccCCcceEEEEecCC
Confidence 9999999999999874
|
|
| >PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-81 Score=651.91 Aligned_cols=411 Identities=45% Similarity=0.752 Sum_probs=388.2
Q ss_pred CCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCC--------CCCCCCCCccccccCCHH
Q 010896 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRD--------FSSKGYIDGKNDRRLDDC 156 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~--------~d~~~~i~~~~~~~~d~~ 156 (498)
+++|+|||||+++|.|.+.++||++|++|+++++++++|+...++..++|+|++ ||+++|+++++.++|||+
T Consensus 3 ~~~V~ItG~g~~~p~g~~~~~~w~~l~~G~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~~~fd~~~~i~~~~~~~~d~~ 82 (424)
T PRK06333 3 KKRIVVTGMGAVSPLGCGVETFWQRLLAGQSGIRTLTDFPVGDLATKIGGQVPDLAEDAEAGFDPDRYLDPKDQRKMDRF 82 (424)
T ss_pred CCCEEEEcceEECCCCCCHHHHHHHHHcCCCeEEeCCcccccCCCCceEEEeccccccccccCChhHcCCHHHHhhcCHH
Confidence 368999999999999999999999999999999999988888888889999987 888888999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCccccccc-CCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENM-DRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~-~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
++|++.++++||+|||+++ ..+ +..++||++|++.+++..+.+.+..+.+.+.+.++|+.++..+.|.++++|++.
T Consensus 83 ~~l~~~aa~~Al~dAgl~~---~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 159 (424)
T PRK06333 83 ILFAMAAAKEALAQAGWDP---DTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIR 159 (424)
T ss_pred HHHHHHHHHHHHHhcCCCc---cccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHH
Confidence 9999999999999999943 344 668999999999999988888888887888888999999999999999999999
Q ss_pred hcCCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccC-CCCCCCCCCcCCCCCCC
Q 010896 236 TGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQR-NEYPKRASRPWDKDRDG 314 (498)
Q Consensus 236 lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~-~~~p~~~~rpfd~~~~G 314 (498)
|||+||+++++++|+||+.||+.|+++|++|++|++||||+|..++|..+..|..++.++.. +..|+..|||||.+++|
T Consensus 160 ~gl~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pfd~~~~G 239 (424)
T PRK06333 160 YGFKGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRDRDG 239 (424)
T ss_pred hCCCCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999998999999999999999865 67788999999999999
Q ss_pred ccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCc
Q 010896 315 FVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTL 394 (498)
Q Consensus 315 ~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~ 394 (498)
+++|||++++|||++++|++||++||++|+|++.++|+++++.|.+++.++.++|++||++||++|+||||||+|||||+
T Consensus 240 ~~~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~ 319 (424)
T PRK06333 240 FVMGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQAGIPPEEVQHLNAHATSTP 319 (424)
T ss_pred eEEecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEeccCCCCc
Confidence 99999999999999999999999999999999999999999989889999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCC-cCcCCCcccccC
Q 010896 395 AGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVT-IDTVPNVKKQHH 473 (498)
Q Consensus 395 ~~D~~E~~al~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~-~~~v~~~~~~~~ 473 (498)
.+|..|..+|+++|++..+++++|.|+++||+++|||++++++++++|++|+|||++|+++|+|.++ +++++...+.++
T Consensus 320 ~~D~~E~~al~~~fg~~~~~~v~s~K~~~GH~~gAaG~~~~~~~~l~l~~g~ipp~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (424)
T PRK06333 320 VGDLGEVAAIKKVFGHVSGLAVSSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLNLENPDPAAEGLDVVANKARPMD 399 (424)
T ss_pred cchHHHHHHHHHHhCCCCCceeECcccchhhhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCccccccccCCCcccC
Confidence 9999999999999997567999999999999999999999999999999999999999999999998 888888878888
Q ss_pred ccEEEEEccccccceeeEEEeeCCC
Q 010896 474 VNVAISNSFGFGGHNSVVVFAPFSP 498 (498)
Q Consensus 474 ~~~alv~s~G~gG~n~~~vl~~~~~ 498 (498)
.+++++|||||||+|+|+||++|.|
T Consensus 400 ~~~al~~s~gfGG~n~~~il~~~~~ 424 (424)
T PRK06333 400 MDYALSNGFGFGGVNASILFRRWEP 424 (424)
T ss_pred cCEEEEeeecCCCeeEEEEEeccCC
Confidence 9999999999999999999999976
|
|
| >PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-80 Score=640.95 Aligned_cols=404 Identities=34% Similarity=0.600 Sum_probs=375.2
Q ss_pred CCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCC--CCCCCCcccccccC-CCCCCCCCCccccccCCHHHHHHH
Q 010896 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRF--DASSFSVRFGGQIR-DFSSKGYIDGKNDRRLDDCWRYCL 161 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~--~~~~~~~~~~g~i~-~~d~~~~i~~~~~~~~d~~~~l~l 161 (498)
+++|||||||+++|.|.+.++||++|++|+++|+++++| +...++.+++|++. +||+ ++++++.++|||++++++
T Consensus 11 ~~~VvItGig~~sp~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~g~i~~~~d~--~~~~~~~~~~d~~~~~~l 88 (418)
T PRK07910 11 FPNVVVTGIAMTTALATDAETTWKLLLDGQSGIRTLDDPFVEEFDLPVRIGGHLLEEFDH--QLTRVELRRMSYLQRMST 88 (418)
T ss_pred CCCEEEEeeEEECCCCCCHHHHHHHHHcCCCeeEeCChhhhhccCCCcceEEEeccCccc--cCCHHHHhhccHHHHHHH
Confidence 478999999999999999999999999999999998765 33356778888884 4554 378899999999999999
Q ss_pred HHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCCC
Q 010896 162 VAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGP 241 (498)
Q Consensus 162 ~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~Gp 241 (498)
.++++||+|||++ ..+..|+||++|++.++.......+..+.+.+.+.++|+.++.++.|..+.++++.++++||
T Consensus 89 ~aa~~AledAg~~-----~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~G~ 163 (418)
T PRK07910 89 VLGRRVWENAGSP-----EVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAKAG 163 (418)
T ss_pred HHHHHHHHHcCCC-----CCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCCCCC
Confidence 9999999999982 35678999999999999988888888877778888889999999999999999999999999
Q ss_pred ccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccc-cccCCCCCCCCCCcCCCCCCCccccce
Q 010896 242 NYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRA-LSQRNEYPKRASRPWDKDRDGFVMGEG 320 (498)
Q Consensus 242 ~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~-ls~~~~~p~~~~rpfd~~~~G~v~gEG 320 (498)
+++++++|+|++.||++|+++|++|+||++||||+|..++|..+..|.++++ ++..++.|++.|||||.+++|+++|||
T Consensus 164 ~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~~~G~v~gEG 243 (418)
T PRK07910 164 VITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDRDGFVFGEG 243 (418)
T ss_pred cccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCCCCCEeeece
Confidence 9999999999999999999999999999999999999999999999999999 887777889999999999999999999
Q ss_pred eEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHH
Q 010896 321 CGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAE 400 (498)
Q Consensus 321 aaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E 400 (498)
++++|||++++|+++|++||++|+|+++++|+++...|+|.+.++.++|++||+++|++++||||||+|||||+.+|.+|
T Consensus 244 aa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E 323 (418)
T PRK07910 244 GALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAE 323 (418)
T ss_pred EEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEE
Q 010896 401 VNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISN 480 (498)
Q Consensus 401 ~~al~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~ 480 (498)
.++|+++|+. ..++++++|+++||+++|||++++++++++|++|+|||++|+++++|.+++++++...+..+++++++|
T Consensus 324 ~~Al~~~fg~-~~~~v~s~K~~~GH~~~AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~l~~~~~~~~~~~~~~al~n 402 (418)
T PRK07910 324 GKAINNALGG-HRPAVYAPKSALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEIDLDVVAGEPRPGNYRYAINN 402 (418)
T ss_pred HHHHHHHhCC-CCCceeCccccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCCCCcCCCccEEEEe
Confidence 9999999986 346799999999999999999999999999999999999999999999999988766656678999999
Q ss_pred ccccccceeeEEEeeC
Q 010896 481 SFGFGGHNSVVVFAPF 496 (498)
Q Consensus 481 s~G~gG~n~~~vl~~~ 496 (498)
||||||+|+++||+++
T Consensus 403 sfGfGG~N~slvl~~~ 418 (418)
T PRK07910 403 SFGFGGHNVALAFGRY 418 (418)
T ss_pred eecCCCeeEEEEEecC
Confidence 9999999999999975
|
|
| >cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-80 Score=637.70 Aligned_cols=399 Identities=29% Similarity=0.461 Sum_probs=374.8
Q ss_pred CcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHHH
Q 010896 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGR 165 (498)
Q Consensus 86 ~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa~ 165 (498)
++|||||||+++|+|.+.++||++|++|+++|+++++|+...++.+++|++++|++.+++++++.++|||+++|++.+++
T Consensus 1 ~~VvItG~G~vsp~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~d~~~~~~l~aa~ 80 (399)
T cd00832 1 RRAVVTGIGVVAPNGLGVEEYWKAVLDGRSGLGPITRFDPSGYPARLAGEVPDFDAAEHLPGRLLPQTDRMTRLALAAAD 80 (399)
T ss_pred CCEEEEeeEEeCCCCCCHHHHHHHHHhCCCeEeeCCccccccCCCceeEEeCCcChhhcCCHHHHhhCCHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999988888899999999998888999999999999999999999
Q ss_pred HHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCCCcccc
Q 010896 166 RALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSI 245 (498)
Q Consensus 166 ~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~Gp~~tv 245 (498)
+||+|||++ ...++..|+||++|++.+++......+..+...+...++++.++..+.|..+++|++.||++||++++
T Consensus 81 eAl~dAGl~---~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~ti 157 (399)
T cd00832 81 WALADAGVD---PAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGMRGPSGVV 157 (399)
T ss_pred HHHHHcCCC---ccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCCCCCcccc
Confidence 999999994 44567789999999999998877777777777777888898888899999999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeEEEE
Q 010896 246 STACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILV 325 (498)
Q Consensus 246 ~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaaavv 325 (498)
+++|+|++.||..|+++|++|+ |++||||+|..++|..+..|..++.++. ...|++.|||||.+++||++|||++++|
T Consensus 158 ~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~-~~~p~~~~rPFd~~~~G~~~gEGa~~lv 235 (399)
T cd00832 158 VAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLST-SDDPARAYLPFDAAAAGYVPGEGGAILV 235 (399)
T ss_pred cchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCC-CCCCCCCcCCCcCCCCCEeeeceEEEEE
Confidence 9999999999999999999999 9999999999999999999999999986 4567889999999999999999999999
Q ss_pred EcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHH
Q 010896 326 MESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIK 405 (498)
Q Consensus 326 Le~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~ 405 (498)
||++++|++||++||++|+|++.++|+.+.. +.+.++.++|++||+++|++++|||||++|||||+.+|..|.++|+
T Consensus 236 Le~~~~A~~rg~~i~a~i~g~~~~~d~~~~~---~~~~~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~~E~~al~ 312 (399)
T cd00832 236 LEDAAAARERGARVYGEIAGYAATFDPPPGS---GRPPGLARAIRLALADAGLTPEDVDVVFADAAGVPELDRAEAAALA 312 (399)
T ss_pred EeeHHHHHHCCCeEEEEEEeEEEcCCCCCCC---CCHHHHHHHHHHHHHHcCCCHHHccEEEeccCcCCCCCHHHHHHHH
Confidence 9999999999999999999999999998753 2478899999999999999999999999999999999999999999
Q ss_pred HHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccc
Q 010896 406 KVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFG 485 (498)
Q Consensus 406 ~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~g 485 (498)
++|+. ..++++|.|+++||+++|||++++++++++|++++|||++|+++++|.+++++++...++..+|++++||||||
T Consensus 313 ~~fg~-~~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~~~~ipp~~n~~~~~p~~~l~~v~~~~~~~~~~~al~nsfgfG 391 (399)
T cd00832 313 AVFGP-RGVPVTAPKTMTGRLYAGGAPLDVATALLALRDGVIPPTVNVTDVPPAYGLDLVTGRPRPAALRTALVLARGRG 391 (399)
T ss_pred HHhCC-CCCceeCCCchhcchHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCcccCCCcccCCCCCEEEEeccCCC
Confidence 99986 36899999999999999999999999999999999999999999999999999887777778899999999999
Q ss_pred cceeeEEE
Q 010896 486 GHNSVVVF 493 (498)
Q Consensus 486 G~n~~~vl 493 (498)
|+|+|+||
T Consensus 392 G~na~lvl 399 (399)
T cd00832 392 GFNSALVV 399 (399)
T ss_pred CcceEEEC
Confidence 99999986
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. |
| >PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-79 Score=634.10 Aligned_cols=404 Identities=44% Similarity=0.722 Sum_probs=381.9
Q ss_pred CcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHHH
Q 010896 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGR 165 (498)
Q Consensus 86 ~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa~ 165 (498)
++|+|||||+++|+|.++++||++|++|+++|+++++|+...++.+++|++++||+..++++++.+++|++++|++.+++
T Consensus 2 ~~v~ItG~g~vsp~G~~~~~~~~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~~~l~~~Aa~ 81 (406)
T PRK08439 2 KRVVVTGIGMINSLGLNKESSFKAICNGECGIKKITLFDASDFPVQIAGEITDFDPTEVMDPKEVKKADRFIQLGLKAAR 81 (406)
T ss_pred CCEEEEeeEEECCCcCCHHHHHHHHHcCCCceEeCCCccccCCCCceeEEcCCcChhhcCCHHHHhhcCHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999998888899999999999888999999999999999999999
Q ss_pred HHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCCCcccc
Q 010896 166 RALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSI 245 (498)
Q Consensus 166 ~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~Gp~~tv 245 (498)
+||+|||+ ++..++..++|+++|++.+++...+..+..+.+.+.+.++|+.++..+.|.++++|++.||++||++++
T Consensus 82 ~AL~dAGl---~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~~~ 158 (406)
T PRK08439 82 EAMKDAGF---LPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLKGPNLSS 158 (406)
T ss_pred HHHHHcCC---CcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCCCCCcccc
Confidence 99999999 445677789999999999998888777777777788889999999999999999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeEEEE
Q 010896 246 STACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILV 325 (498)
Q Consensus 246 ~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaaavv 325 (498)
+++|+|++.||..|+++|++|++|++||||+|..++|..+..|..++.|+..+..|+..|||||.+++|+++|||++++|
T Consensus 159 ~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGa~~lv 238 (406)
T PRK08439 159 VTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDRDGFVMGEGAGALV 238 (406)
T ss_pred ccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCCCCcEEeeCceEEEE
Confidence 99999999999999999999999999999999999999999999999999888889999999999999999999999999
Q ss_pred EcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHH
Q 010896 326 MESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIK 405 (498)
Q Consensus 326 Le~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~ 405 (498)
||++++|++||++||++|.|++.++|+++++.|++ .++.++|++||+++|+ +||||||+|||||+.+|..|.++|+
T Consensus 239 Le~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~p~~--~~~~~a~~~al~~ag~--~~i~~v~~hgtgt~~~D~~E~~al~ 314 (406)
T PRK08439 239 LEEYESAKKRGAKIYAEIIGFGESGDANHITSPAP--EGPLRAMKAALEMAGN--PKIDYINAHGTSTPYNDKNETAALK 314 (406)
T ss_pred EccHHHHHHCCCeEEEEEEeEEccCCCCCCCCCCH--HHHHHHHHHHHHHcCC--CccCEEEccCCcCCCCCHHHHHHHH
Confidence 99999999999999999999999999998888766 5678999999999999 8999999999999999999999999
Q ss_pred HHhcCC-CcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEcccc
Q 010896 406 KVFKDT-SEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGF 484 (498)
Q Consensus 406 ~~f~~~-~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~ 484 (498)
++|+.. ..++++++|+++||+++|||++++++++++|++|+|||++|+++++|.+++++++...++.+++.+++|||||
T Consensus 315 ~~f~~~~~~~~v~s~K~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nsfgf 394 (406)
T PRK08439 315 ELFGSKEKVPPVSSTKGQIGHCLGAAGAIEAVISIMAMRDGILPPTINQETPDPECDLDYIPNVARKAELNVVMSNSFGF 394 (406)
T ss_pred HHhcccCCCCeEECcccccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCCcccCCCccccCCCCEEEEeeecC
Confidence 999873 3568999999999999999999999999999999999999999999999999998877777899999999999
Q ss_pred ccceeeEEEeeC
Q 010896 485 GGHNSVVVFAPF 496 (498)
Q Consensus 485 gG~n~~~vl~~~ 496 (498)
||+|+|+||++|
T Consensus 395 GG~n~~lvl~~~ 406 (406)
T PRK08439 395 GGTNGVVIFKKV 406 (406)
T ss_pred CCceEEEEEecC
Confidence 999999999986
|
|
| >PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-80 Score=633.32 Aligned_cols=402 Identities=33% Similarity=0.527 Sum_probs=373.2
Q ss_pred CcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCC-CCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHH
Q 010896 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDA-SSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAG 164 (498)
Q Consensus 86 ~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~-~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa 164 (498)
++|||||||+++|.|.+.++||++|++|+++|+++++|+. ..++.++++.+++|+...++++++.++||++++|++.++
T Consensus 2 ~~VvITG~g~vtp~G~~~~~~~~~L~~g~s~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~r~~~~~~~~al~aa 81 (405)
T PRK09116 2 RRVVVTGMGGVTALGEDWQTIAARLKAGRNAVRRMPEWDRYDGLNTRLAAPIDDFELPAHYTRKKIRSMGRVSLMATRAS 81 (405)
T ss_pred CCEEEEeeEEECCCCCCHHHHHHHHHcCCCCEEeCCchhhccCCCCceEEEecCcChhHhcCHHHHhhCCHHHHHHHHHH
Confidence 6899999999999999999999999999999999999875 567889999999998887788899999999999999999
Q ss_pred HHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCCCccc
Q 010896 165 RRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYS 244 (498)
Q Consensus 165 ~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~Gp~~t 244 (498)
++||+|||+... ...+..|+||++|++.++......+...+.+.+...++++.++..++|.++++|++.|+++||+++
T Consensus 82 ~~Al~dAGl~~~--~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~Gp~~t 159 (405)
T PRK09116 82 ELALEDAGLLGD--PILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGLKGRVIP 159 (405)
T ss_pred HHHHHHcCCCCc--cccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhCCCCCccc
Confidence 999999999421 234567999999999999888877777777777777888888889999999999999999999999
Q ss_pred cccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeEEE
Q 010896 245 ISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324 (498)
Q Consensus 245 v~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaaav 324 (498)
++++|+|++.||..|+++|++|++|++||||+|. ++|.....|..++.++..+..|+..|||||.+++|+++|||++++
T Consensus 160 i~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~-~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~~G~v~gEGa~~~ 238 (405)
T PRK09116 160 TSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEE-LCPTEAAVFDTLFATSTRNDAPELTPRPFDANRDGLVIGEGAGTL 238 (405)
T ss_pred ccchhhhHHHHHHHHHHHHHcCCCCEEEEecchh-cChHHHHHHHHhhhhccCCCCCCCCCCCCcCCCCCEeeeccEEEE
Confidence 9999999999999999999999999999999998 788888889999888876777889999999999999999999999
Q ss_pred EEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHH
Q 010896 325 VMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAI 404 (498)
Q Consensus 325 vLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al 404 (498)
|||++++|++||++||++|+|++.++|+.+++.| ++.++.++|+++|+++|++|+|||||++|||||+.||..|.++|
T Consensus 239 vLe~~~~A~~rga~i~a~i~g~~~~~d~~~~~~p--~~~~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~~E~~Ai 316 (405)
T PRK09116 239 VLEELEHAKARGATIYAEIVGFGTNSDGAHVTQP--QAETMQIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQAT 316 (405)
T ss_pred EEccHHHHHhCCCceEEEEEEEEEcCCCCcCCCC--CHHHHHHHHHHHHHHhCCCHHHcCEEECcCccCCCCCHHHHHHH
Confidence 9999999999999999999999999999887766 56778899999999999999999999999999999999999999
Q ss_pred HHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCC-CcCcCCCcccccCccEEEEEccc
Q 010896 405 KKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEV-TIDTVPNVKKQHHVNVAISNSFG 483 (498)
Q Consensus 405 ~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~-~~~~v~~~~~~~~~~~alv~s~G 483 (498)
+++|+. .++++|.|+++||+++|+|++++++++++|++|+|||++|+++++|+| ++++++.+.++.+.+++++||||
T Consensus 317 ~~~fg~--~~pv~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ippt~~~~~~~~~~~~l~~v~~~~~~~~~~~~l~nsfG 394 (405)
T PRK09116 317 AAVFGA--RMPISSLKSYFGHTLGACGALEAWMSIEMMNEGWFAPTLNLTQVDPACGALDYIMGEAREIDTEYVMSNNFA 394 (405)
T ss_pred HHHhCC--CCeeECcchhhcccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCcccCccCCCCccCCCCEEEEeeec
Confidence 999986 588999999999999999999999999999999999999999999999 68999887777788999999999
Q ss_pred cccceeeEEEe
Q 010896 484 FGGHNSVVVFA 494 (498)
Q Consensus 484 ~gG~n~~~vl~ 494 (498)
|||+|+++||+
T Consensus 395 fGG~n~~lvl~ 405 (405)
T PRK09116 395 FGGINTSLIFK 405 (405)
T ss_pred CCcccEEEEEC
Confidence 99999999985
|
|
| >PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-79 Score=628.96 Aligned_cols=401 Identities=36% Similarity=0.607 Sum_probs=366.1
Q ss_pred CcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHHH
Q 010896 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGR 165 (498)
Q Consensus 86 ~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa~ 165 (498)
++|||||||+++|.|.++++||++|++|+++|+++++|+...++.+++|+++ |++..+++++..++|++..++++.+++
T Consensus 2 ~rVvITG~G~vsp~G~~~~~~w~~l~~G~sgi~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~r~~~~a~~aa~ 80 (406)
T PRK07967 2 RRVVITGLGIVSSIGNNQQEVLASLREGRSGITFSPEFAEMGMRSQVWGNVK-LDPTGLIDRKVMRFMGDASAYAYLAME 80 (406)
T ss_pred CcEEEEcceEECCCCCCHHHHHHHHHcCCCceeECCcccccCCCCceEEEcC-CChhhcCCHHHhhcCCHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999998889889999874 887777888888999999999999999
Q ss_pred HHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHH-hcCCCcCCccccchhhhhhHHHHHHhhcCCCCccc
Q 010896 166 RALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQ-KGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYS 244 (498)
Q Consensus 166 ~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~Gp~~t 244 (498)
+||+|||+ ....++..++||++|++.+++......+..+.. .+.+.++|+.++..+.|.++++|++.||++||+++
T Consensus 81 ~Al~dAGl---~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l~Gp~~t 157 (406)
T PRK07967 81 QAIADAGL---SEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIKGVNYS 157 (406)
T ss_pred HHHHHcCC---CCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHCCCCCccc
Confidence 99999999 444566789999999998887666655555554 56678899999999999999999999999999999
Q ss_pred cccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccC-CCCCCCCCCcCCCCCCCccccceeEE
Q 010896 245 ISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQR-NEYPKRASRPWDKDRDGFVMGEGCGI 323 (498)
Q Consensus 245 v~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~-~~~p~~~~rpfd~~~~G~v~gEGaaa 323 (498)
++++|+|++.||..|+++|++|++|++||||+|. +.+.....|..++.|+.. +.+|+..|||||.+++||++|||+++
T Consensus 158 vs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~-~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~G~v~gEGaa~ 236 (406)
T PRK07967 158 ISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEE-LDWEMSCLFDAMGALSTKYNDTPEKASRAYDANRDGFVIAGGGGV 236 (406)
T ss_pred cccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecc-cChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCCCceeeeceEEE
Confidence 9999999999999999999999999999999997 566666779999999865 56789999999999999999999999
Q ss_pred EEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHH
Q 010896 324 LVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNA 403 (498)
Q Consensus 324 vvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~a 403 (498)
+|||++++|++||++||++|+|++.++|+++++.| ++.++.++|++||+.++ + ||||||+|||||+.+|.+|.++
T Consensus 237 lvLe~~~~A~~rga~i~a~i~G~g~~~d~~~~~~p--~~~~~~~a~~~Al~~~~--~-~Idyi~aHgtGT~~~D~~E~~A 311 (406)
T PRK07967 237 VVVEELEHALARGAKIYAEIVGYGATSDGYDMVAP--SGEGAVRCMQMALATVD--T-PIDYINTHGTSTPVGDVKELGA 311 (406)
T ss_pred EEEeeHHHHHhCCCcEEEEEEEEEECCCCCCCCCC--CHHHHHHHHHHHHhCCC--C-CccEEEcCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999988765 68889999999998644 5 9999999999999999999999
Q ss_pred HHHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCC-CcCcCCCcccccCccEEEEEcc
Q 010896 404 IKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEV-TIDTVPNVKKQHHVNVAISNSF 482 (498)
Q Consensus 404 l~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~-~~~~v~~~~~~~~~~~alv~s~ 482 (498)
|+++|++ ..++|+++|+++||+++|||++++++++++|++|+|||++|+++++|++ ++++++...+..+++++++|||
T Consensus 312 i~~~fg~-~~~~v~s~K~~~GH~~~AaG~~e~i~~~lal~~~~iPpt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sf 390 (406)
T PRK07967 312 IREVFGD-KSPAISATKSLTGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEELDPQAAGMPIVTETTDNAELTTVMSNSF 390 (406)
T ss_pred HHHHhCC-CCCeeECcccccccCccccchHHHHHHHHHHhcCcCCCCCCCCCCCccccCCCccCCCCcCCCCCEEEEecc
Confidence 9999986 4578999999999999999999999999999999999999999999998 5777777666667899999999
Q ss_pred ccccceeeEEEeeCC
Q 010896 483 GFGGHNSVVVFAPFS 497 (498)
Q Consensus 483 G~gG~n~~~vl~~~~ 497 (498)
||||+|+|+||++|.
T Consensus 391 gfGG~n~~lvl~~~~ 405 (406)
T PRK07967 391 GFGGTNATLVFRRYK 405 (406)
T ss_pred cCCCeeEEEEEEecC
Confidence 999999999999984
|
|
| >PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-79 Score=635.31 Aligned_cols=409 Identities=48% Similarity=0.822 Sum_probs=388.6
Q ss_pred CcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHHH
Q 010896 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGR 165 (498)
Q Consensus 86 ~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa~ 165 (498)
++|+|||||+++|.|.+.++||++|++|+++++++++|+...++..++|+|++||++.|+++++.++|||+++|++.+++
T Consensus 2 ~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~~~l~~~aa~ 81 (411)
T PRK07314 2 RRVVVTGLGAVSPLGNDVESTWKNLLAGKSGIGPITHFDTSDLAVKIAGEVKDFNPDDYMSRKEARRMDRFIQYGIAAAK 81 (411)
T ss_pred CcEEEEcceEECCCcCCHHHHHHHHHhCCCcEEECCcccccCCCccEEEEeCCcChhhcCCHHHhhcCCHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999988888899999999999988999999999999999999999
Q ss_pred HHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCCCcccc
Q 010896 166 RALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSI 245 (498)
Q Consensus 166 ~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~Gp~~tv 245 (498)
+||+|||+ ..++++..++||++|++.++.....+++..+.+.+...++|+.++..+.|..++++++.||++||++++
T Consensus 82 ~Al~dAGl---~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~tv 158 (411)
T PRK07314 82 QAVEDAGL---EITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGAKGPNHSI 158 (411)
T ss_pred HHHHHcCC---CcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCCCCccccc
Confidence 99999999 555778889999999999999888888888888888888888889999999999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeEEEE
Q 010896 246 STACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILV 325 (498)
Q Consensus 246 ~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaaavv 325 (498)
+++|+|++.||..|+++|++|+||++||||+|..++|..+..|..++.++.+...|+..|+|||.+++|+++|||++++|
T Consensus 159 ~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~dG~~~geGAaavv 238 (411)
T PRK07314 159 VTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDRDGFVMGEGAGILV 238 (411)
T ss_pred hhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCCCCEeEEceEEEEE
Confidence 99999999999999999999999999999999989999999999999998777778899999999999999999999999
Q ss_pred EcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHH
Q 010896 326 MESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIK 405 (498)
Q Consensus 326 Le~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~ 405 (498)
|+++++|+++|++||++|+|++.++|+.+.+.|.+.+.++.+++++||+++|++++||||||+|||||+.+|.+|.++|.
T Consensus 239 L~~~~~A~~~g~~~~a~I~g~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~~E~~al~ 318 (411)
T PRK07314 239 LEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAIK 318 (411)
T ss_pred EeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEEccccCCccccHHHHHHHH
Confidence 99999999999999999999999999999888888888899999999999999999999999999999999999999999
Q ss_pred HHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEcccc
Q 010896 406 KVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGF 484 (498)
Q Consensus 406 ~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~ 484 (498)
++|+. ..++++++.|+++||+++|||++++++++++|++|+|||++|+++|++.++++.++...+..++|++++|||||
T Consensus 319 ~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gf 398 (411)
T PRK07314 319 RVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIRDQVIPPTINLDNPDEECDLDYVPNEARERKIDYALSNSFGF 398 (411)
T ss_pred HHhcccCCCCeeECccchhchhHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCccccCCcccCCCCCEEEEecccC
Confidence 99985 35799999999999999999999999999999999999999999999999999888777777899999999999
Q ss_pred ccceeeEEEeeCC
Q 010896 485 GGHNSVVVFAPFS 497 (498)
Q Consensus 485 gG~n~~~vl~~~~ 497 (498)
||+|+|+||++|.
T Consensus 399 GG~n~~~vl~~~~ 411 (411)
T PRK07314 399 GGTNASLVFKRYE 411 (411)
T ss_pred CCceEEEEEecCC
Confidence 9999999999974
|
|
| >PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-77 Score=623.28 Aligned_cols=409 Identities=40% Similarity=0.686 Sum_probs=369.8
Q ss_pred CCCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCC--------------CCCCcccccccC------CCCCCC
Q 010896 84 PKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDA--------------SSFSVRFGGQIR------DFSSKG 143 (498)
Q Consensus 84 ~~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~--------------~~~~~~~~g~i~------~~d~~~ 143 (498)
+.++|||||||+++|+|.++++||++|++|+++|+++++++. ..++.++++.++ +||+.+
T Consensus 4 ~~~~VvItG~g~~~p~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~ 83 (437)
T PLN02836 4 PTRRVVVTGLGLVTPLGCGVETTWRRLIAGECGVRALTQDDLKMKSEDEETQLYTLDQLPSRVAALVPRGTGPGDFDEEL 83 (437)
T ss_pred CCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCccccCChhhhccccccccccccccccCCccEEEEeccccccccCChHH
Confidence 467899999999999999999999999999999999976542 245567777775 477665
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccch
Q 010896 144 YIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYS 223 (498)
Q Consensus 144 ~i~~~~~~~~d~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (498)
|.. .+++|+..+|++.++++||+|||+.+. ...+..++||++|++.++...+.+++..+.+...+.++|+.++..
T Consensus 84 ~~~---~~~~~~~~~~~~~aa~~Al~dAg~~~~--~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 158 (437)
T PLN02836 84 WLN---SRSSSRFIGYALCAADEALSDARWLPS--EDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRI 158 (437)
T ss_pred hcc---ccccCHHHHHHHHHHHHHHHHcCCCcc--cccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhh
Confidence 532 457999999999999999999999432 124567999999999988887777777677777788999999999
Q ss_pred hhhhhHHHHHHhhcCCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccC-CCCCC
Q 010896 224 ITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQR-NEYPK 302 (498)
Q Consensus 224 ~~n~~a~~ia~~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~-~~~p~ 302 (498)
+.|+++++|++.||++||+++|+++|+|++.||+.|+++|++|+||++||||+|..++|..+..|..++.++.. +..|+
T Consensus 159 ~~n~~a~~is~~~gl~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~ 238 (437)
T PLN02836 159 LINMAAGHVSIRYGFQGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPT 238 (437)
T ss_pred cccHHHHHHHHHhCCCCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcc
Confidence 99999999999999999999999999999999999999999999999999999998999999999999988764 55678
Q ss_pred CCCCcCCCCCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 010896 303 RASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEE 382 (498)
Q Consensus 303 ~~~rpfd~~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~d 382 (498)
..|+|||.+++|+++|||++++|||++++|+++|+++|++|+|++.++|+.+++.|++++++..+++++||++|||+++|
T Consensus 239 ~~~~pfd~~~~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~Agi~~~d 318 (437)
T PLN02836 239 EASRPFDCDRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQSGLHPNQ 318 (437)
T ss_pred cccCCcccCCCCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeecCCCCCCcCCCcchHHHHHHHHHHHHHcCCCHhH
Confidence 89999999999999999999999999999999999999999999999999999999989999999999999999999999
Q ss_pred cCEEEccCCCCccCcHHHHHHHHHHhcCC---CcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCC
Q 010896 383 VNYVNAHATSTLAGDLAEVNAIKKVFKDT---SEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPE 459 (498)
Q Consensus 383 Id~i~~hgtgt~~~D~~E~~al~~~f~~~---~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~ 459 (498)
|||||+|||||+.+|..|.++++++|+.. ..+++++.|+++||+++|||++++++++++|++++|||++|+++|+|.
T Consensus 319 Id~ve~hgtgt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~n~~~~~p~ 398 (437)
T PLN02836 319 VDYVNAHATSTPLGDAVEARAIKTVFSEHATSGGLAFSSTKGATGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERPDPI 398 (437)
T ss_pred cCEEEccCCcCcCcCHHHHHHHHHHhcccccCCCCeeECCcccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCC
Confidence 99999999999999999999999999873 358999999999999999999999999999999999999999999999
Q ss_pred CCcCcCCCcc-cccCccEEEEEccccccceeeEEEeeCC
Q 010896 460 VTIDTVPNVK-KQHHVNVAISNSFGFGGHNSVVVFAPFS 497 (498)
Q Consensus 460 ~~~~~v~~~~-~~~~~~~alv~s~G~gG~n~~~vl~~~~ 497 (498)
|++++++... +..+++++++|||||||+|+|+||++++
T Consensus 399 ~~~~~~~~~~~~~~~~~~~l~nsfgfGG~na~lvl~~~~ 437 (437)
T PLN02836 399 FDDGFVPLTASKAMLIRAALSNSFGFGGTNASLLFTSPP 437 (437)
T ss_pred CCcccCcccCCCCCCccEEEEecccCCCeeEEEEEecCC
Confidence 9988887533 4557899999999999999999999875
|
|
| >TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-76 Score=615.28 Aligned_cols=406 Identities=49% Similarity=0.857 Sum_probs=385.0
Q ss_pred CcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHHH
Q 010896 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGR 165 (498)
Q Consensus 86 ~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa~ 165 (498)
++|+|||||+++|.|.+.++||++|++|+++++++++|+...++..++|.+++||+++|+++++.++|||+++|++++++
T Consensus 1 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~s~~~~~~~~~~~~~~~~~~g~i~~f~~~~~~~~~~~~~~~~~~~l~~~aa~ 80 (407)
T TIGR03150 1 RRVVVTGLGAVTPLGNGVEEFWENLLAGKSGIGPITRFDASDLPVKIAGEVKDFDPEDYIDKKEARRMDRFIQYALAAAK 80 (407)
T ss_pred CcEEEEcceEECCCcCCHHHHHHHHHcCCCeeEECCcccccCCCCcEEEEeCCcChhhcCCHHHHhhcCHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999988888899999999999988999999999999999999999
Q ss_pred HHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCCCcccc
Q 010896 166 RALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSI 245 (498)
Q Consensus 166 ~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~Gp~~tv 245 (498)
+||+|||+ ..+.++..++||++|++.++....+.++..+.+.+...++|+.++..+.|..++++++.||++||++++
T Consensus 81 ~Al~dAgl---~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~g~~~~v 157 (407)
T TIGR03150 81 EAVEDSGL---DIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAKGPNHAV 157 (407)
T ss_pred HHHHhcCC---CcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCCCCccccc
Confidence 99999999 556778889999999999999888888888888888889999999999999999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeEEEE
Q 010896 246 STACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILV 325 (498)
Q Consensus 246 ~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaaavv 325 (498)
+++|+|++.||+.|+++|++|+||++||||+|..++|..+..|..++.++.++..|...|+|||.+++|+++|||++++|
T Consensus 158 ~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~g~~~gEGAaalv 237 (407)
T TIGR03150 158 VTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDRDGFVMGEGAGVLV 237 (407)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCCCCcEEEeceEEEEE
Confidence 99999999999999999999999999999999989999999999999999877778889999999999999999999999
Q ss_pred EcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHH
Q 010896 326 MESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIK 405 (498)
Q Consensus 326 Le~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~ 405 (498)
|+++++|+++|++||++|+|++.++|+.+.+.|.+.+.++.+++++||+++|++++||||||+|||||+.+|.+|.+++.
T Consensus 238 L~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~~ 317 (407)
T TIGR03150 238 LEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIK 317 (407)
T ss_pred EeeHHHHHHCCCeEEEEEEEEEECCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHHH
Confidence 99999999999999999999999999998888888888899999999999999999999999999999999999999999
Q ss_pred HHhcCC-CcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEcccc
Q 010896 406 KVFKDT-SEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGF 484 (498)
Q Consensus 406 ~~f~~~-~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~ 484 (498)
++|+.. .++++++.|+++||+++|||++++++++++|++++|||++|+++|++.+++++++.+.+...+|++++|||||
T Consensus 318 ~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~s~gf 397 (407)
T TIGR03150 318 RVFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIFTVLAIRDGVVPPTINLDNPDPECDLDYVPNEARERKIDYALSNSFGF 397 (407)
T ss_pred HHhccCCCCCceeCCcchhchhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccCCCCccCCcCEEEEecccC
Confidence 999863 4799999999999999999999999999999999999999999999999999998777777789999999999
Q ss_pred ccceeeEEEe
Q 010896 485 GGHNSVVVFA 494 (498)
Q Consensus 485 gG~n~~~vl~ 494 (498)
||+|+|+||+
T Consensus 398 gG~n~~~vl~ 407 (407)
T TIGR03150 398 GGHNASLVFK 407 (407)
T ss_pred CCceEEEEeC
Confidence 9999999984
|
FabB sequences should fall well below the noise cutoff of this model. |
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-77 Score=707.50 Aligned_cols=404 Identities=27% Similarity=0.421 Sum_probs=355.6
Q ss_pred CCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccC--CCCCCCCC-----------CcccccccC--CCCCCCC-CCcc
Q 010896 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPI--DRFDASSF-----------SVRFGGQIR--DFSSKGY-IDGK 148 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~--~~~~~~~~-----------~~~~~g~i~--~~d~~~~-i~~~ 148 (498)
.++|+||||||++|.+.++++||++|.+|+++|+++ +||+...| .++++|+++ +||+.+| |+++
T Consensus 6 ~~~IAIvGmg~~~P~a~~~~~fW~~L~~G~~~i~~ip~~rw~~~~~~~~~~~~~~~~~~~~ggfl~~v~FD~~~F~i~p~ 85 (2582)
T TIGR02813 6 DMPIAIVGMASIFANSRYLNKFWDLIFEKIDAITDVPSDHWAKDDYYDSDKSEADKSYCKRGGFLPEVDFNPMEFGLPPN 85 (2582)
T ss_pred CCCEEEEeeeeeCCCCCCHHHHHHHHHcCCCccCCCChhhCChhhccCccccccCCcccceeEecCccCCCHhhcCCCHH
Confidence 467999999999999999999999999999999987 47876443 457888887 4898888 9999
Q ss_pred ccccCCHHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhH---------------------HHHHHH
Q 010896 149 NDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFT---------------------TGVEAL 207 (498)
Q Consensus 149 ~~~~~d~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~---------------------~~~~~~ 207 (498)
+++.|||+|+|+++++++||+|||+.+ .++++|+|||+|++.+...... .....+
T Consensus 86 ea~~mDpqqrl~L~~a~eALedAG~~~----~~~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (2582)
T TIGR02813 86 ILELTDISQLLSLVVAKEVLNDAGLPD----GYDRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDEDSEML 161 (2582)
T ss_pred HHHhcCHHHHHHHHHHHHHHHhCCCCC----CCCCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhhHHHh
Confidence 999999999999999999999999942 2678899999999776432100 001111
Q ss_pred H---HhcCCCcCCccccchhhhhhHHHHHHhhcCCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhh
Q 010896 208 I---QKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTG 284 (498)
Q Consensus 208 ~---~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~ 284 (498)
. ...+...+++.+++.+.|+.++||++.|||+||+++|+++|+||+.||++|++.|++|+||+|||||++..++|..
T Consensus 162 ~~~~~~~~~~~~~~~~~g~~~n~~A~RIS~~f~L~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~ 241 (2582)
T TIGR02813 162 IKKFQDQYIHWEENSFPGSLGNVISGRIANRFDLGGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFM 241 (2582)
T ss_pred hhhhcccccccCccccccccccHHHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHH
Confidence 1 1122345677889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHH
Q 010896 285 VGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLG 364 (498)
Q Consensus 285 ~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~ 364 (498)
+..|.++++||. ++.|||||.++|||++|||+|++|||++++|++||++|||+|+|+++++||+......|++.+
T Consensus 242 ~~~fs~~~~lS~-----~g~crpFD~~adG~v~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~~~~itaP~~~g 316 (2582)
T TIGR02813 242 YMSFSKTPAFTT-----NEDIQPFDIDSKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAPRPEG 316 (2582)
T ss_pred HHHHHhccCcCC-----CCCccCCCCCCCcccccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCCCCCCcCCCHHH
Confidence 999999999984 678999999999999999999999999999999999999999999999999854444556677
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcCC----CcccccccccccCCcchhhhHHHHHHHHH
Q 010896 365 VSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDT----SEMKMNGTKSMIGHGLGAAGGLEAITTIK 440 (498)
Q Consensus 365 ~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~~----~~~~v~s~K~~~Gh~~~AaG~~~li~a~~ 440 (498)
+.++|++||++||++|+||+|||+|||||+.||++|.++|.++|+.. .+++++|+|++|||+++|||++++||+++
T Consensus 317 q~~~i~~Al~~Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~l 396 (2582)
T TIGR02813 317 QAKALKRAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVL 396 (2582)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999862 46899999999999999999999999999
Q ss_pred HhhcCccCCCCCCCCCCCCCCcCc----CCCccccc------CccEEEEEccccccceeeEEEeeCC
Q 010896 441 AITTGWLHPTLNQDNLEPEVTIDT----VPNVKKQH------HVNVAISNSFGFGGHNSVVVFAPFS 497 (498)
Q Consensus 441 ~L~~g~ipp~~~~~~~~~~~~~~~----v~~~~~~~------~~~~alv~s~G~gG~n~~~vl~~~~ 497 (498)
+|++|+|||++|+++|||.++++. ++...+.+ .+|+++||||||||+|+|+||++|+
T Consensus 397 al~~~~iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfGGtN~hvvlee~~ 463 (2582)
T TIGR02813 397 ALHHKVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEYS 463 (2582)
T ss_pred HHhcCCcCCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeCccCCCeeEEEEEeecC
Confidence 999999999999999999998763 44443332 4699999999999999999999985
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-77 Score=673.34 Aligned_cols=396 Identities=30% Similarity=0.460 Sum_probs=358.3
Q ss_pred EEEEeeceecCCCCCHHHHHHHHHcCCCCcccCC--CCCCCCC-----------CcccccccCC---CCCCCC-CCcccc
Q 010896 88 IVITGMGLVSVFGSDIDKFYNKLLEGESGISPID--RFDASSF-----------SVRFGGQIRD---FSSKGY-IDGKND 150 (498)
Q Consensus 88 V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~--~~~~~~~-----------~~~~~g~i~~---~d~~~~-i~~~~~ 150 (498)
|+|+||+|++|+.+++++||++|.+|+++|++++ |||...+ ..+++|++++ ||+.|| |+|+|+
T Consensus 6 IAIiGm~~rfPga~~~~~~W~~l~~g~~~i~~ip~~rwd~~~~~~~~~~~~gk~~~~~ggfl~~~~~FD~~fFgisPrEA 85 (1061)
T COG3321 6 IAIIGMACRFPGADSPEEFWDLLKEGRDEITEVPADRWDVDAYYDPDPTVPGKSYSRWGGFLDDVDDFDALFFGISPREA 85 (1061)
T ss_pred EEEEeccccCCCCCCHHHHHHHHhcCCceeeecChhhhhHhhccCCccccccccccccccccCCccccCHHHcCCCHHHH
Confidence 9999999999999999999999999999999774 7776544 2478888764 999999 999999
Q ss_pred ccCCHHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHH
Q 010896 151 RRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSA 230 (498)
Q Consensus 151 ~~~d~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~ 230 (498)
..||||+||+|+.+|+||||||+ ....+.++++|||+|++...+...... ... ...++...++..+..++
T Consensus 86 ~~mDPQqRllLe~aw~AlEdAG~---~~~~l~g~~tgV~~g~~~~~y~~~~~~------~~~-~~~~~~~~g~~~~~~a~ 155 (1061)
T COG3321 86 EAMDPQQRLLLEVAWEALEDAGI---YPDSLRGSATGVFAGASVADYLLLLLA------DDE-AEPEYAITGNSSSVAAG 155 (1061)
T ss_pred HhcCchHhHHHHHHHHHHHHcCC---CccccCCcceEEEEeeccCcccccccc------ccc-cccceecccchhhHHHH
Confidence 99999999999999999999999 555677789999999987655433211 011 45566677778889999
Q ss_pred HHHHhhcCCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCC
Q 010896 231 LLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDK 310 (498)
Q Consensus 231 ~ia~~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~ 310 (498)
|||+.|||+||+++|+++|+|+++|+|+||+.|+.|+||++|+||++..++|.....|++.++|| |++.|++||.
T Consensus 156 Risy~l~l~GPs~~vdtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls-----~~g~c~~fd~ 230 (1061)
T COG3321 156 RISYVLGLSGPSVTVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLS-----PDGRCKAFDA 230 (1061)
T ss_pred HHHHHhcCCCCCccccchhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcC-----CCCcceeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999 5899999999
Q ss_pred CCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccC
Q 010896 311 DRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHA 390 (498)
Q Consensus 311 ~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hg 390 (498)
++|||++|||++++||+++++|+++|++||++|+|+++|+||.......|++.++.+++++||+++||+|++|+|||+||
T Consensus 231 ~adG~v~geG~g~vvLKrl~~A~~dgd~IyavI~gsavn~dG~~~gltaP~~~aQ~~v~~~al~~a~i~p~tv~yvEaHg 310 (1061)
T COG3321 231 DADGYVRGEGAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGIDPATVQYVEAHG 310 (1061)
T ss_pred CCCCEEEeeeEEEEEEEEhHHHHhCCCeEEEEEEeeeeccCCCcCCCCCCCHHHHHHHHHHHHHhcCCCcccCcEEEecC
Confidence 99999999999999999999999999999999999999999976677777889999999999999999999999999999
Q ss_pred CCCccCcHHHHHHHHHHhcC---CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCC-
Q 010896 391 TSTLAGDLAEVNAIKKVFKD---TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVP- 466 (498)
Q Consensus 391 tgt~~~D~~E~~al~~~f~~---~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~- 466 (498)
|||++||++|+++|.++|+. ..+|.++|+|+|+||++.|+|++++||++|+|+|+++||++|+++|||.++++..|
T Consensus 311 TGT~lGDpiE~~aL~~v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK~~Lal~~~~ip~~l~~~~~np~i~~~~sp~ 390 (1061)
T COG3321 311 TGTPLGDPIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIKTALALKHGYIPPTLHFDTPNPEIDFDSSPF 390 (1061)
T ss_pred CCCCCcCHHHHHHHHHHhccCCCCCcccccccccccccHHHHHHHHHHHHHHHhhhcCccCCcCCCCCCCcCCccccCCe
Confidence 99999999999999999985 46899999999999999999999999999999999999999999999999987543
Q ss_pred ---Cccccc----CccEEEEEccccccceeeEEEeeCCC
Q 010896 467 ---NVKKQH----HVNVAISNSFGFGGHNSVVVFAPFSP 498 (498)
Q Consensus 467 ---~~~~~~----~~~~alv~s~G~gG~n~~~vl~~~~~ 498 (498)
...+++ .+|++.||||||||+|+|+||++++|
T Consensus 391 ~v~~~~~~W~~~~~prrAgvssfG~gGtNaHvIlEe~~~ 429 (1061)
T COG3321 391 VVPTEATPWPTGGGPRRAGVSSFGFGGTNAHVILEEAPP 429 (1061)
T ss_pred EeecCCcCCCCCCCCceeeeeccCCCCCceEEEEeecCC
Confidence 222222 57999999999999999999999874
|
|
| >PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-74 Score=594.89 Aligned_cols=397 Identities=41% Similarity=0.724 Sum_probs=363.0
Q ss_pred eecCCCCCHHHHHHHHHcCCCCcccCCCCC----------------CCCCCcccccccC--CCCCCCCCCccccccCCHH
Q 010896 95 LVSVFGSDIDKFYNKLLEGESGISPIDRFD----------------ASSFSVRFGGQIR--DFSSKGYIDGKNDRRLDDC 156 (498)
Q Consensus 95 ~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~----------------~~~~~~~~~g~i~--~~d~~~~i~~~~~~~~d~~ 156 (498)
+++|.|.++|+||++|++|+++|+++++|+ ...++++++|+|+ +||+.+|.. ..+.|++
T Consensus 1 ~vs~~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~f~~~~~~~---~~~~~~~ 77 (421)
T PTZ00050 1 VVTPLGVGAESTWEALIAGKSGIRKLTEFPKFLPDCIPEQKALENLVAAMPCQIAAEVDQSEFDPSDFAP---TKRESRA 77 (421)
T ss_pred CCCCCcCCHHHHHHHHHcCCCeeecCCchhhcccccccccccccccccCCCCceEEECCcccCChhHcCC---cccCCHH
Confidence 478999999999999999999999998776 4457778899997 588776532 2245999
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
++|++.++++||+|||+++ +..++..++|+++|++.++.......+..+.+.+...++|+.++..+.|.++++|++.|
T Consensus 78 ~~l~~~aa~~Al~dAGl~~--~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 155 (421)
T PTZ00050 78 THFAMAAAREALADAKLDI--LSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKH 155 (421)
T ss_pred HHHHHHHHHHHHHHcCCCc--ccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHh
Confidence 9999999999999999941 44567789999999999888877777777777888889999999999999999999999
Q ss_pred cCCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccC-CCCCCCCCCcCCCCCCCc
Q 010896 237 GLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQR-NEYPKRASRPWDKDRDGF 315 (498)
Q Consensus 237 gl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~-~~~p~~~~rpfd~~~~G~ 315 (498)
||+||+++|+++|+||+.||..|+++|++|++|++||||+|..++|..+..|.+++.++.. +.+|+..|||||++++|+
T Consensus 156 ~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~~G~ 235 (421)
T PTZ00050 156 KLKGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDRAGF 235 (421)
T ss_pred CCCCcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCCCCE
Confidence 9999999999999999999999999999999999999999998899999999999998854 456888999999999999
Q ss_pred cccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHH-cCCCCCCcCEEEccCCCCc
Q 010896 316 VMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLED-AGVSPEEVNYVNAHATSTL 394 (498)
Q Consensus 316 v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~-Agl~~~dId~i~~hgtgt~ 394 (498)
++|||++++|||++++|+++|++||++|+|++.++|+++.+.|.+++.++.++|++||++ ||++++||||||+|||||+
T Consensus 236 ~~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~ 315 (421)
T PTZ00050 236 VMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGANININDVDYVNAHATSTP 315 (421)
T ss_pred eeccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCChHHHHHHHHHHHHhccCCChhhCCEEECCCccCC
Confidence 999999999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred cCcHHHHHHHHHHhcCC--CcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccc-
Q 010896 395 AGDLAEVNAIKKVFKDT--SEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQ- 471 (498)
Q Consensus 395 ~~D~~E~~al~~~f~~~--~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~- 471 (498)
.+|.+|.+++.++|+.. .+++++|+|+++||+++|||++++++++++|++++|||++|+++|++.+++++++...+.
T Consensus 316 ~~D~~E~~al~~~~~~~~~~~~~v~s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~l~~~~~~~~~~ 395 (421)
T PTZ00050 316 IGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENPDAECDLNLVQGKTAHP 395 (421)
T ss_pred CCCHHHHHHHHHHhccccCCCceEECccccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCccccCCcccCc
Confidence 99999999999999863 479999999999999999999999999999999999999999999999998888765443
Q ss_pred -cCccEEEEEccccccceeeEEEeeC
Q 010896 472 -HHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 472 -~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
.+++++++|||||||+|+|+||+++
T Consensus 396 ~~~~~~~l~nsfgfgG~n~~lvl~~~ 421 (421)
T PTZ00050 396 LQSIDAVLSTSFGFGGVNTALLFTKY 421 (421)
T ss_pred CCCCCEEEEeeecCCCeeEEEEEeCC
Confidence 2579999999999999999999985
|
|
| >cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-73 Score=593.50 Aligned_cols=405 Identities=49% Similarity=0.847 Sum_probs=383.8
Q ss_pred CcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHHH
Q 010896 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGR 165 (498)
Q Consensus 86 ~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa~ 165 (498)
++|+|||||+++|.|.+.++||++|++|+++++++++|+...++..+++++++|++.+++++++.++|||+++|++.+++
T Consensus 1 ~~i~I~G~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~aa~ 80 (406)
T cd00834 1 RRVVITGLGAVTPLGNGVEEFWEALLAGRSGIRPITRFDASGFPSRIAGEVPDFDPEDYLDRKELRRMDRFAQFALAAAE 80 (406)
T ss_pred CcEEEECcceeCCCcCCHHHHHHHHHcCCCeeEECCcccccCCCccEEEEcCCCChhhcCCHHHhccCCHHHHHHHHHHH
Confidence 47999999999999999999999999999999999988887888899999999998877999999999999999999999
Q ss_pred HHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCCCcccc
Q 010896 166 RALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSI 245 (498)
Q Consensus 166 ~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~Gp~~tv 245 (498)
+||+|||+ ..++++..++||++|++.++......++..+...+.+.++|+.++..+.+..+++|++.||++||++++
T Consensus 81 ~AL~dAgl---~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g~~~~v 157 (406)
T cd00834 81 EALADAGL---DPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLRGPNYTV 157 (406)
T ss_pred HHHHHcCC---CcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhCCCCccccc
Confidence 99999999 455678899999999999999999999998888888889999999999999999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeEEEE
Q 010896 246 STACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILV 325 (498)
Q Consensus 246 ~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaaavv 325 (498)
+++|+|++.||+.|+++|++|+||.+||||+|....|..+..|..++.++.....|+..++|||.+++|+++||||+++|
T Consensus 158 ~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~~~g~~~geGA~a~v 237 (406)
T cd00834 158 STACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDRDGFVLGEGAGVLV 237 (406)
T ss_pred chHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCCCCCEeeeccEEEEE
Confidence 99999999999999999999999999999999988899999999999999876668889999999999999999999999
Q ss_pred EcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHH
Q 010896 326 MESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIK 405 (498)
Q Consensus 326 Le~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~ 405 (498)
|++.++|+++|+++|++|+|++.++|+.+.+.|.+.+.++.++++++|+++|++++|||||++|||||+.+|.+|.+++.
T Consensus 238 L~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~~E~~al~ 317 (406)
T cd00834 238 LESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPEDIDYINAHGTSTPLNDAAESKAIK 317 (406)
T ss_pred EecHHHHHHCCCeEEEEEEEEEecccCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEecccccCccccHHHHHHHH
Confidence 99999999999999999999999999998888888899999999999999999999999999999999999999999999
Q ss_pred HHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEcccc
Q 010896 406 KVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGF 484 (498)
Q Consensus 406 ~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~ 484 (498)
++|+. ..++++++.|+++||+++|||++++++++++|++|++||++|+++|++.+++++++.+.+.++.|++++|||||
T Consensus 318 ~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~ 397 (406)
T cd00834 318 RVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLALRDGVLPPTINLEEPDPECDLDYVPNEAREAPIRYALSNSFGF 397 (406)
T ss_pred HHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccCCCCccccccEEEEeeecC
Confidence 99986 35799999999999999999999999999999999999999999999988888888777778889999999999
Q ss_pred ccceeeEEE
Q 010896 485 GGHNSVVVF 493 (498)
Q Consensus 485 gG~n~~~vl 493 (498)
||+|+|+||
T Consensus 398 gG~n~~~vl 406 (406)
T cd00834 398 GGHNASLVF 406 (406)
T ss_pred CceeeEEEC
Confidence 999999996
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. |
| >cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-73 Score=589.64 Aligned_cols=394 Identities=37% Similarity=0.593 Sum_probs=362.2
Q ss_pred CcEEEEeeceecCCCCC---HHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccC---CHHHHH
Q 010896 86 KRIVITGMGLVSVFGSD---IDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRL---DDCWRY 159 (498)
Q Consensus 86 ~~V~ItG~g~~~p~g~~---~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~---d~~~~l 159 (498)
.+|+|||||+++|.|.+ .++||++|++|+++++++++|+ ..++..++|++++|+ +++++.+++ ||+++|
T Consensus 1 ~~v~ItG~g~v~p~g~~~~~~~~~w~~l~~g~s~i~~~~~~~-~~~~~~~~g~i~~~~----~~~~~~~~~~~~~~~~~l 75 (407)
T cd00828 1 SRVVITGIGVVSPHGEGCDEVEEFWEALREGRSGIAPVARLK-SRFDRGVAGQIPTGD----IPGWDAKRTGIVDRTTLL 75 (407)
T ss_pred CCEEEECceeecCCCCCCCCHHHHHHHHHcCCCceeeCCccc-ccCCccEEEEccCCC----cCHHHHHhccCCCHHHHH
Confidence 37999999999999999 9999999999999999999887 667778899998877 677778888 999999
Q ss_pred HHHHHHHHHHHCCCCcccccc-cCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhh--hhhHHHHHHhh
Q 010896 160 CLVAGRRALEEASLSPQVLEN-MDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSIT--NMGSALLAIDT 236 (498)
Q Consensus 160 ~l~aa~~AL~dAG~~~~~~~~-~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--n~~a~~ia~~l 236 (498)
++.++++||+|||++ .+. ++..++|+++|++.++.......+..+. +..+++.++..+. |.++++|++.|
T Consensus 76 ~~~aa~~Al~dAGl~---~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~a~~is~~~ 148 (407)
T cd00828 76 ALVATEEALADAGIT---DPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDA----RAVNPYVSPKWMLSPNTVAGWVNILL 148 (407)
T ss_pred HHHHHHHHHHhCCCC---ccccCCccCeEEEEeeccCCHHHHHHHHHHHh----hccCCcccchhccccchHHHHHHHHh
Confidence 999999999999994 445 6778999999999998877666555443 4567888888887 99999999999
Q ss_pred cC-CCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCc
Q 010896 237 GL-MGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGF 315 (498)
Q Consensus 237 gl-~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~ 315 (498)
++ +||+++|+++|+|++.||..|+++|++|++|++||||+|... |..+..|..++.++.....|...|+|||.+++|+
T Consensus 149 gl~~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~-~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~~~G~ 227 (407)
T cd00828 149 LSSHGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL-EEGLSGFANMGALSTAEEEPEEMSRPFDETRDGF 227 (407)
T ss_pred CcCCCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccC-hHHHHHHHHcCCCCCCCCCCCcccCCCcCCCCcE
Confidence 99 999999999999999999999999999999999999999977 8899999999999987666788999999999999
Q ss_pred cccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCcc
Q 010896 316 VMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLA 395 (498)
Q Consensus 316 v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~ 395 (498)
++||||+++|||++++|+++|++||++|.|++.++|+.+...+. ++.++.++|++||+++|++++||||||+|||||+.
T Consensus 228 ~~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~-~~~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~ 306 (407)
T cd00828 228 VEAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPA-GGKGIARAIRTALAKAGLSLDDLDVISAHGTSTPA 306 (407)
T ss_pred EeecceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCCCCCCC-ChHHHHHHHHHHHHHcCCCHHHcCEEecccccCcc
Confidence 99999999999999999999999999999999999999887776 78899999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhcCC-CcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccC-
Q 010896 396 GDLAEVNAIKKVFKDT-SEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHH- 473 (498)
Q Consensus 396 ~D~~E~~al~~~f~~~-~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~- 473 (498)
+|..|.++++++|+.. .++++++.|+++||+++|||++++++++++|+++++||++|+++++|.+++++++.+.+.++
T Consensus 307 ~D~~E~~ai~~~~~~~~~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (407)
T cd00828 307 NDVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGALQSLEHGLIPPTANLDDVDPDVEHLSVVGLSRDLNL 386 (407)
T ss_pred ccHHHHHHHHHHHhccCCCceeecccchhccchhhhhHHHHHHHHHHHhcCccCCCCCCCCCCcccccccccCcCccCCC
Confidence 9999999999999863 46899999999999999999999999999999999999999999999999888887777666
Q ss_pred -ccEEEEEccccccceeeEEE
Q 010896 474 -VNVAISNSFGFGGHNSVVVF 493 (498)
Q Consensus 474 -~~~alv~s~G~gG~n~~~vl 493 (498)
.+.+++|||||||+|+|+||
T Consensus 387 ~~~~al~~s~gfgG~n~~lv~ 407 (407)
T cd00828 387 KVRAALVNAFGFGGSNAALVL 407 (407)
T ss_pred CccEEEEecccCCCcceEEEC
Confidence 49999999999999999986
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. |
| >PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-73 Score=586.36 Aligned_cols=398 Identities=30% Similarity=0.433 Sum_probs=351.7
Q ss_pred CcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCC--------CCCcccccccCCCCCCCCCCccccccCCHHH
Q 010896 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDAS--------SFSVRFGGQIRDFSSKGYIDGKNDRRLDDCW 157 (498)
Q Consensus 86 ~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~--------~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~ 157 (498)
++|||||||+++|.|.+.++||++|++|+++|+++++|+.. .....+++++++|++..+++++..++|++.+
T Consensus 2 ~~VvItG~g~vsp~g~~~~~~w~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 81 (410)
T PRK07103 2 DEVVVTGVGVVSAIGQGRPSFAAALLAGRHAFGVMRRPGRQVPDDAGAGLASAFIGAELDSLALPERLDAKLLRRASLSA 81 (410)
T ss_pred CCEEEEcceEECCCcCCHHHHHHHHHcCCCeEecCCcccccccccccccCCCceEEEEeCCCChhhcCCHHHhhcCCHHH
Confidence 68999999999999999999999999999999999887653 3345688999988887778888899999999
Q ss_pred HHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhc
Q 010896 158 RYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTG 237 (498)
Q Consensus 158 ~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lg 237 (498)
+|++.++++||+|||++ ..+..++||++|++.+........+..+ ......+.|+.....+.+.++++|++.||
T Consensus 82 ~lal~Aa~eAl~dAgl~-----~~~~~riGvivG~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 155 (410)
T PRK07103 82 QAALAAAREAWRDAALG-----PVDPDRIGLVVGGSNLQQREQALVHETY-RDRPAFLRPSYGLSFMDTDLVGLCSEQFG 155 (410)
T ss_pred HHHHHHHHHHHHhcCcC-----CCCCCCEEEEEccCCcchHHHHHHHHHh-ccCccccChhhhhhhcchHHHHHHHHHhC
Confidence 99999999999999993 3456799999998876655555544443 23444566766667777889999999999
Q ss_pred CCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccC--CCCCCCCCCcCCCCCCCc
Q 010896 238 LMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQR--NEYPKRASRPWDKDRDGF 315 (498)
Q Consensus 238 l~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~--~~~p~~~~rpfd~~~~G~ 315 (498)
++||+++++++|+|++.||+.|+++|++|+||+|||+|++..++|..+..|..++.|+.. ..+|...|||||.+++|+
T Consensus 156 l~G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~dG~ 235 (410)
T PRK07103 156 IRGEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDRDGF 235 (410)
T ss_pred CCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCCCCe
Confidence 999999999999999999999999999999999999999988999999999999988754 567888999999999999
Q ss_pred cccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCcc
Q 010896 316 VMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLA 395 (498)
Q Consensus 316 v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~ 395 (498)
++|||++++|||++++|+++|++||++|+|++.++|+++.+. |+..++.++|++||+++|++++|||||++|||||+.
T Consensus 236 v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~--p~~~~~~~a~~~Al~~Agi~~~dId~v~~hgtgt~~ 313 (410)
T PRK07103 236 IYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPD--PSLEGEMRVIRAALRRAGLGPEDIDYVNPHGTGSPL 313 (410)
T ss_pred eEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCCCCC--CCHHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCCC
Confidence 999999999999999999999999999999999999988654 566677899999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCC-CCCCCcCcCCCcccccCc
Q 010896 396 GDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNL-EPEVTIDTVPNVKKQHHV 474 (498)
Q Consensus 396 ~D~~E~~al~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~-~~~~~~~~v~~~~~~~~~ 474 (498)
+|..|.++|...+ ..+++|++.|+++||+++|||++++++++++|++|+|||++|+++| ++. +++++...+..+.
T Consensus 314 ~D~~E~~al~~~~--~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~--~~~v~~~~~~~~~ 389 (410)
T PRK07103 314 GDETELAALFASG--LAHAWINATKSLTGHGLSAAGIVELIATLLQMRAGFLHPSRNLDEPIDER--FRWVGSTAESARI 389 (410)
T ss_pred CCHHHHHHHhcCC--CCCCeEECCCcccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCC--cCccCCCCcCCCC
Confidence 9999999994322 2468999999999999999999999999999999999999999988 554 4556665556678
Q ss_pred cEEEEEccccccceeeEEEee
Q 010896 475 NVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 475 ~~alv~s~G~gG~n~~~vl~~ 495 (498)
+++++|||||||+|+|+||++
T Consensus 390 ~~~l~~s~gfGG~n~~~vl~~ 410 (410)
T PRK07103 390 RYALSLSFGFGGINTALVLER 410 (410)
T ss_pred CEEEEecccCCCceEEEEEeC
Confidence 999999999999999999985
|
|
| >PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-72 Score=571.28 Aligned_cols=378 Identities=31% Similarity=0.509 Sum_probs=333.6
Q ss_pred CCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHH
Q 010896 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAG 164 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa 164 (498)
++||||||||+++|.|. .++||++|++|+++|++++.|+. ++....+.+. ++ + ..++ +++..++
T Consensus 1 ~~rVvITG~G~vsp~G~-~~~~~~~l~~G~sgi~~~~~~~~--~~~~~~~~~~-~~------~---~~~~---~~~~~a~ 64 (381)
T PRK05952 1 MMKVVVTGIGLVSALGD-LEQSWQRLLQGKSGIKLHQPFPE--LPPLPLGLIG-NQ------P---SSLE---DLTKTVV 64 (381)
T ss_pred CCeEEEEeeEEECcccC-HHHHHHHHHcCCCCeEeCCcccc--cccccceeec-cc------c---cccc---HHHHHHH
Confidence 46899999999999999 99999999999999999988762 1111111110 00 1 1233 4566899
Q ss_pred HHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcC---CCcCCccccchhhhhhHHHHHHhhcCCCC
Q 010896 165 RRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGY---KKITPFFIPYSITNMGSALLAIDTGLMGP 241 (498)
Q Consensus 165 ~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~n~~a~~ia~~lgl~Gp 241 (498)
++||+|+|+.+ +..|+||++|++.++....++++..+.+.+. ..++|..++.+++|.+++++++.|+++||
T Consensus 65 ~~Al~dagl~~------~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~Gp 138 (381)
T PRK05952 65 TAALKDAGLTP------PLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQGP 138 (381)
T ss_pred HHHHHhcCCCC------CCCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCCCc
Confidence 99999999942 2368999999999998888877776655443 25677888889999999999999999999
Q ss_pred ccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCcccccee
Q 010896 242 NYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGC 321 (498)
Q Consensus 242 ~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGa 321 (498)
+++++++|+|++.||..|+++|++|++|++||||+|..++|..+..|..++.++. +.|||||.+++|+++|||+
T Consensus 139 ~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~------~~~rPfd~~r~G~v~gEGa 212 (381)
T PRK05952 139 VLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAK------TGAYPFDRQREGLVLGEGG 212 (381)
T ss_pred cccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCC------CCCCCCCCCCCCccccccE
Confidence 9999999999999999999999999999999999998899999999999999985 4699999999999999999
Q ss_pred EEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHH
Q 010896 322 GILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEV 401 (498)
Q Consensus 322 aavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~ 401 (498)
+++|||++++|+++|++||++|+|++.++|+++.+.|++++..+.++|++||+++||+|+||||||+|||||+.+|.+|.
T Consensus 213 a~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D~~E~ 292 (381)
T PRK05952 213 AILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREA 292 (381)
T ss_pred EEEEEeeHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEc
Q 010896 402 NAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNS 481 (498)
Q Consensus 402 ~al~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s 481 (498)
++|+++|+. .+++++.|+++||+++|||++++++++++|++++|||++|+++|++ ++++++. .+..+++++++||
T Consensus 293 ~al~~~fg~--~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ipp~~~~~~~~~--~~~~v~~-~~~~~~~~~l~~s 367 (381)
T PRK05952 293 NLIQALFPH--RVAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPPCVGLQEPEF--DLNFVRQ-AQQSPLQNVLCLS 367 (381)
T ss_pred HHHHHHcCC--CCeeecchhhhccChHHHHHHHHHHHHHHHhcCccCCCCCCCCCCC--CCCcCCC-cccCCCCEEEEee
Confidence 999999985 6899999999999999999999999999999999999999998754 4555653 4556789999999
Q ss_pred cccccceeeEEEee
Q 010896 482 FGFGGHNSVVVFAP 495 (498)
Q Consensus 482 ~G~gG~n~~~vl~~ 495 (498)
|||||+|+++||++
T Consensus 368 ~gfGG~na~lvl~~ 381 (381)
T PRK05952 368 FGFGGQNAAIALGK 381 (381)
T ss_pred ecCCCeeEEEEEeC
Confidence 99999999999985
|
|
| >PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-71 Score=571.26 Aligned_cols=403 Identities=33% Similarity=0.488 Sum_probs=357.0
Q ss_pred CCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHH
Q 010896 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAG 164 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa 164 (498)
+.+|+|||||+++|.|.+.++||++|++|+++|+++++|+...+..+++|.++.++.. ....+++.+++++.++
T Consensus 10 ~~~VvITG~G~vs~~G~~~~~~~~~L~~G~s~i~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~~~~~~~~~aa 83 (425)
T PRK06501 10 RPIVAVTGMGVVTSLGQGKADNWAALTAGESGIHTITRFPTEGLRTRIAGTVDFLPES------PFGASALSEALARLAA 83 (425)
T ss_pred CcCEEEEeeeEECCCCCCHHHHHHHHHcCCCceEcCCcccccCCCCceEEEEeecccc------cccccCHHHHHHHHHH
Confidence 4679999999999999999999999999999999999999888888999998633322 2334677889999999
Q ss_pred HHHHHHCCCCccccc-----------ccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHH
Q 010896 165 RRALEEASLSPQVLE-----------NMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLA 233 (498)
Q Consensus 165 ~~AL~dAG~~~~~~~-----------~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia 233 (498)
++||+|||+.+.... .....+++++.++...... .++.++.....+..+..++....+..+++|+
T Consensus 84 ~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~ 159 (425)
T PRK06501 84 EEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAP----SYDRLLRAARGGRFDALHERFQFGSIADRLA 159 (425)
T ss_pred HHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHH----HHHHHHhhcCcccCChhhhhhcccHHHHHHH
Confidence 999999999432110 0124678888877654322 2344444444344444566777788999999
Q ss_pred HhhcCCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCC
Q 010896 234 IDTGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRD 313 (498)
Q Consensus 234 ~~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~ 313 (498)
..||++||+++++++|+|++.||++|+++|++|++|++||||+|..++|..+..|..++.++...+.|+..|||||.+++
T Consensus 160 ~~~gl~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~r~ 239 (425)
T PRK06501 160 DRFGTRGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKASKPFSKDRD 239 (425)
T ss_pred HHhCCCCCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCCCCcccCCCCCCCC
Confidence 99999999999999999999999999999999999999999999989999999999999999877778899999999999
Q ss_pred CccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCC
Q 010896 314 GFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATST 393 (498)
Q Consensus 314 G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt 393 (498)
|+++|||++++|||++++|+++|++||++|.|++.++|+++.+.+.+++..+.++|+++|+++|++++|||||++|||||
T Consensus 240 G~v~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~AL~~agi~p~dId~i~~Hgtgt 319 (425)
T PRK06501 240 GFVMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAALADAGLTPEQIDYINAHGTST 319 (425)
T ss_pred CeeeeccEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCccC
Confidence 99999999999999999999999999999999999999998888888898999999999999999999999999999999
Q ss_pred ccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCccccc
Q 010896 394 LAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQH 472 (498)
Q Consensus 394 ~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~ 472 (498)
+.+|..|..+|.++|+. ...++|++.|+++||+++|||++++++++++|++|+|||++|+++|+|.+++++++...+..
T Consensus 320 ~~~d~~E~~al~~~~~~~~~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~~~~~~~~~ 399 (425)
T PRK06501 320 PENDKMEYLGLSAVFGERLASIPVSSNKSMIGHTLTAAGAVEAVFSLLTIQTGRLPPTINYDNPDPAIPLDVVPNVARDA 399 (425)
T ss_pred cchHHHHHHHHHHHhcccCCCcEEECCCcccCCCchhhhHHHHHHHHHHHhcCcCCCcCCCCCCCCCCCcccCCCcccCC
Confidence 99999999999999985 24689999999999999999999999999999999999999999999999999998777777
Q ss_pred CccEEEEEccccccceeeEEEeeCC
Q 010896 473 HVNVAISNSFGFGGHNSVVVFAPFS 497 (498)
Q Consensus 473 ~~~~alv~s~G~gG~n~~~vl~~~~ 497 (498)
+++.+++|||||||+|+|+||++++
T Consensus 400 ~~~~~l~ns~gfgG~n~~~vl~~~~ 424 (425)
T PRK06501 400 RVTAVLSNSFGFGGQNASLVLTAEP 424 (425)
T ss_pred CCCEEEEeCccCCCeeEEEEEecCC
Confidence 8899999999999999999999986
|
|
| >PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-71 Score=552.61 Aligned_cols=339 Identities=38% Similarity=0.650 Sum_probs=321.5
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHH
Q 010896 153 LDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALL 232 (498)
Q Consensus 153 ~d~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~i 232 (498)
||+.++|++.++++||+|||+ . .+..|+||++|++.++...+.++++.+.+.+.+.++|+.++.++.|+++++|
T Consensus 1 ~~~~~~~~~~a~~~a~~~a~~---~---~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~i 74 (342)
T PRK14691 1 MGRWWRYKWITFHPSLTHADN---T---EKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHV 74 (342)
T ss_pred CCHHHHHHHHHHHHHHHhCCC---C---CCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHH
Confidence 578999999999999999998 2 4567999999999999999988888888888889999999999999999999
Q ss_pred HHhhcCCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccC-CCCCCCCCCcCCCC
Q 010896 233 AIDTGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQR-NEYPKRASRPWDKD 311 (498)
Q Consensus 233 a~~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~-~~~p~~~~rpfd~~ 311 (498)
++.||++||+++++++|+|++.||..|+++|++|++|++||||+|..++|..+..|..++.|+.. +..|++.|||||++
T Consensus 75 s~~~~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~ 154 (342)
T PRK14691 75 SIKHHFKGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTA 154 (342)
T ss_pred HHHhCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999865 56789999999999
Q ss_pred CCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCC
Q 010896 312 RDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHAT 391 (498)
Q Consensus 312 ~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgt 391 (498)
++||++||||+++|||++++|+++|++||++|+|++.++|+.+.+.|.+++.+..++|++||+++||+++||||||+|||
T Consensus 155 r~G~v~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~~p~p~~~~~~~ai~~AL~~Agl~p~dIdyIeaHgt 234 (342)
T PRK14691 155 RDGFVMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQVQHLNAHAT 234 (342)
T ss_pred CCCccccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCC
Confidence 99999999999999999999999999999999999999999998888899999999999999999999999999999999
Q ss_pred CCccCcHHHHHHHHHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCC-cCcCCCccc
Q 010896 392 STLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVT-IDTVPNVKK 470 (498)
Q Consensus 392 gt~~~D~~E~~al~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~-~~~v~~~~~ 470 (498)
||+.+|.+|.++|+++|+....++|+|+|+++||+++|||++++++++++|++++|||++|+++|+|.++ +++++.+.+
T Consensus 235 gT~~~D~~E~~Ai~~~fg~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ippt~n~~~~d~~~~~~~~v~~~~~ 314 (342)
T PRK14691 235 STPVGDLGEINAIKHLFGESNALAITSTKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAKGLNIIAGNAQ 314 (342)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCceEECCcccccCCcchhhHHHHHHHHHHHhCCccCCcCCCCCCCccccccCcccCCCc
Confidence 9999999999999999987556899999999999999999999999999999999999999999999984 888887777
Q ss_pred ccCccEEEEEccccccceeeEEEeeCC
Q 010896 471 QHHVNVAISNSFGFGGHNSVVVFAPFS 497 (498)
Q Consensus 471 ~~~~~~alv~s~G~gG~n~~~vl~~~~ 497 (498)
+.+.+++++|||||||+|+|+||++|.
T Consensus 315 ~~~~~~al~nsfgfGG~n~~lvl~~~~ 341 (342)
T PRK14691 315 PHDMTYALSNGFGFAGVNASILLKRWV 341 (342)
T ss_pred cCCCCEEEEeCccCCCeeEEEEEeecc
Confidence 778899999999999999999999984
|
|
| >PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-67 Score=540.32 Aligned_cols=387 Identities=27% Similarity=0.431 Sum_probs=337.9
Q ss_pred CCcEEEEeeceecCCCCCHHHHHHHHHcCC-CCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHH
Q 010896 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGE-SGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVA 163 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~-~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~a 163 (498)
|++|||||+|+++|.|.+.++||++|++|+ ++|++++.|+.. ++. +.|.+++|+. .+++.+..+++++..++++.+
T Consensus 1 m~~VvITG~G~vsp~G~~~~~~~~~l~~G~~sgi~~~~~~~~~-~~~-~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~a 77 (392)
T PRK09185 1 MTPVYISAFGATSALGRGLDAILAALRAGRASGMRPCDFWLVD-LPT-WVGEVVGVEL-PALPAALAAFDCRNNRLALLA 77 (392)
T ss_pred CCcEEEEeeEEECCCcCCHHHHHHHHHcCCCCCeEeCcccccc-CCe-EEEEecCccc-ccCCHHHHhcCCHHHHHHHHH
Confidence 468999999999999999999999999999 999999877653 443 3466777763 346666778889888888877
Q ss_pred HHH---HHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCC
Q 010896 164 GRR---ALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMG 240 (498)
Q Consensus 164 a~~---AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~G 240 (498)
+.+ +++|++ ...+..|+||++|++.++....+..+..+.........++.++....|.++++|++.||++|
T Consensus 78 ~~~~~~a~~~~~------~~~~~~r~gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 151 (392)
T PRK09185 78 LQQIEPAVEAAI------ARYGADRIGVVLGTSTSGILEGELAYRRRDPAHGALPADYHYAQQELGSLADFLRAYLGLSG 151 (392)
T ss_pred HHHHHHHHHhhc------ccCCCCcEEEEEeeCCccHHHHHHHHHHHhhccCCCCCchhhhhhcccHHHHHHHHHhCCCC
Confidence 776 444443 23456789999999999988887776664433222334666777888999999999999999
Q ss_pred CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccce
Q 010896 241 PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEG 320 (498)
Q Consensus 241 p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEG 320 (498)
|+++++++|+|++.||..|+++|++|+||.|||||+|. +++..+..|..++.++. +.|+|||.+++|+++|||
T Consensus 152 p~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~-~~~~~~~~~~~~~~l~~------~~~~Pfd~~~~G~~~gEG 224 (392)
T PRK09185 152 PAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDS-LCRLTLNGFNSLESLSP------QPCRPFSANRDGINIGEA 224 (392)
T ss_pred CcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccc-cChHHHHHHHhccccCC------CccCCCcCCCCccceece
Confidence 99999999999999999999999999999999999997 66777788888888773 679999999999999999
Q ss_pred eEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHH
Q 010896 321 CGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAE 400 (498)
Q Consensus 321 aaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E 400 (498)
++++|||++ ++.. ++|.|++.++|+++...|++++.++.+++++||++||++++|||||++|||||+.+|..|
T Consensus 225 aa~vVLe~~-----~~~~--~~I~g~g~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D~~E 297 (392)
T PRK09185 225 AAFFLLERE-----DDAA--VALLGVGESSDAHHMSAPHPEGLGAILAMQQALADAGLAPADIGYINLHGTATPLNDAME 297 (392)
T ss_pred EEEEEEEEc-----CCCc--EEEEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEeCCCCCcCCCHHH
Confidence 999999986 3333 579999999999998888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEE
Q 010896 401 VNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISN 480 (498)
Q Consensus 401 ~~al~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~ 480 (498)
..+|+++|+. .+|+++.|+++||+++|||++++++++++|++|++||++|+++++|++++++++.+.+...+|++++|
T Consensus 298 ~~al~~~f~~--~~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 375 (392)
T PRK09185 298 SRAVAAVFGD--GVPCSSTKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPLYLVENAQALAIRYVLSN 375 (392)
T ss_pred HHHHHHHhCC--CCceeCCCcccccChhhcchHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccCCCCccCCCCEEEEe
Confidence 9999999986 46899999999999999999999999999999999999999999999998888877777778999999
Q ss_pred ccccccceeeEEEeeC
Q 010896 481 SFGFGGHNSVVVFAPF 496 (498)
Q Consensus 481 s~G~gG~n~~~vl~~~ 496 (498)
||||||+|+|+||++.
T Consensus 376 s~gfgG~n~~lvl~~~ 391 (392)
T PRK09185 376 SFAFGGNNCSLIFGRA 391 (392)
T ss_pred CccCCceeEEEEEEeC
Confidence 9999999999999975
|
|
| >smart00825 PKS_KS Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-67 Score=549.68 Aligned_cols=394 Identities=30% Similarity=0.475 Sum_probs=352.0
Q ss_pred EEEEeeceecCCCCCHHHHHHHHHcCCCCcccCC--CCCCCCC------------CcccccccC---CCCCCCC-CCccc
Q 010896 88 IVITGMGLVSVFGSDIDKFYNKLLEGESGISPID--RFDASSF------------SVRFGGQIR---DFSSKGY-IDGKN 149 (498)
Q Consensus 88 V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~--~~~~~~~------------~~~~~g~i~---~~d~~~~-i~~~~ 149 (498)
|+|||||+++|.|.+.++||++|.+|++++++++ +|+...+ ..++++.++ +||++.| +++++
T Consensus 1 v~ItG~g~~~p~g~~~~~~~~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~~~~~i~~~~ 80 (424)
T smart00825 1 IAIVGMSCRFPGADSPEEFWDLLREGRDAITEIPADRWDADAFYYDPDPDRPGKSYVRWGGFLDDVDLFDAAFFGISPRE 80 (424)
T ss_pred CEEEEEEeeCCCCCCHHHHHHHHHcCCcccccCChHHcCccccccccccccCCCcccccceecCchhhCCHhHcCCCHHH
Confidence 7899999999999999999999999999999885 6765432 456677654 4788777 89999
Q ss_pred cccCCHHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhH
Q 010896 150 DRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGS 229 (498)
Q Consensus 150 ~~~~d~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a 229 (498)
.++||++++|+++++++||+|||+ +...++..|+||++|++.+. +..+.......+.++.++..+.|..+
T Consensus 81 ~~~~~~~~~l~~~aa~~Al~dAGl---~~~~id~~~~gv~~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~a 150 (424)
T smart00825 81 AEAMDPQQRLLLEVAWEALEDAGI---DPESLRGSRTGVFVGAMSSD-------YAELLARDPEDIEGYAATGTARSFIA 150 (424)
T ss_pred HHhcCHHHHHHHHHHHHHHHHcCC---ChhHcCCCCCEEEEEEcHHH-------HHHHHhhCccccchhhhccchhHHHH
Confidence 999999999999999999999999 55567788999999986432 23334455566778888888899999
Q ss_pred HHHHHhhcCCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCC
Q 010896 230 ALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWD 309 (498)
Q Consensus 230 ~~ia~~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd 309 (498)
.++++.||++||+++++++|+|++.||..|+++|++|++|++||||+|...++..+..|..++.++ |.+.++|||
T Consensus 151 ~~i~~~lgl~g~~~~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~-----~~~~~~pf~ 225 (424)
T smart00825 151 NRISYFFDLRGPSVTVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLS-----PDGRCKTFD 225 (424)
T ss_pred HHHHHHhCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCC-----CCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999988998899999988887 467899999
Q ss_pred CCCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEcc
Q 010896 310 KDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAH 389 (498)
Q Consensus 310 ~~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~h 389 (498)
.+++|+++|||++++||+++++|+++|+++|++|+|++..+|+++.....+++..+.++|++||+++|++++|||||++|
T Consensus 226 ~~~~g~~~geGAaalVLe~~e~A~~~g~~i~a~I~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~i~~h 305 (424)
T smart00825 226 ADADGYVRGEGVGVVVLKRLSDALRDGDPILAVIRGSAVNQDGRSNGLTAPSGPAQARLIRQALARAGVDPADVDYVEAH 305 (424)
T ss_pred CCCCcccccceEEEEEEccHHHHHHCCCeEEEEEEEEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHhCCCHHHccEEEee
Confidence 99999999999999999999999999999999999999999988766666788888999999999999999999999999
Q ss_pred CCCCccCcHHHHHHHHHHhcCC----CcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcC--
Q 010896 390 ATSTLAGDLAEVNAIKKVFKDT----SEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTID-- 463 (498)
Q Consensus 390 gtgt~~~D~~E~~al~~~f~~~----~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~-- 463 (498)
||||+.+|..|.++|+++|+.. .++++++.|+++||+.+|||++++++++++|++|+|||++|+++|++.++++
T Consensus 306 ~tgt~~~d~~E~~al~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~ 385 (424)
T smart00825 306 GTGTPLGDPIEAEALAAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLIKVVLALRHGTIPPTLHFETPNPHIDLEES 385 (424)
T ss_pred CCCCCCCCHHHHHHHHHHHhccCCCCCceEEeccccccCCcccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcccC
Confidence 9999999999999999999852 4688999999999999999999999999999999999999999999999876
Q ss_pred --cCCCccccc----CccEEEEEccccccceeeEEEeeC
Q 010896 464 --TVPNVKKQH----HVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 464 --~v~~~~~~~----~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
+++.+.+.+ .++++++|||||||+|+|+||++|
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~l~~s~gfgg~n~~lvl~~~ 424 (424)
T smart00825 386 PLRVPTEATPWPATGRPRRAGVSSFGFGGTNAHVILEEA 424 (424)
T ss_pred ceEccCCCcCCCCCCCccEEEEeccCCCCceEEEEEecC
Confidence 455444433 589999999999999999999986
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. |
| >PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-66 Score=532.34 Aligned_cols=375 Identities=21% Similarity=0.277 Sum_probs=316.2
Q ss_pred CCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCcc-ccccCCHHHHHHHHH
Q 010896 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGK-NDRRLDDCWRYCLVA 163 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~-~~~~~d~~~~l~l~a 163 (498)
.++|||||||+++|.|.++++||++|++|+++ ...+.++...++.... .+++.+.+++++ ..++||+.++|++.+
T Consensus 5 ~~rVvITGiG~vsp~G~~~e~~w~aL~~G~sg-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~r~~~r~~~~a~~A 80 (398)
T PRK06519 5 PNDVVITGIGLVSSLGEGLDAHWNALSAGRPQ-PNVDTETFAPYPVHPL---PEIDWSQQIPKRGDQRQMETWQRLGTYA 80 (398)
T ss_pred CCCEEEEcceEECCCCCCHHHHHHHHHcCCCC-CCCCcccccCcCcccc---cccChhhcCCchhhhhccCHHHHHHHHH
Confidence 46899999999999999999999999999997 2222222222322233 334444446666 678999999999999
Q ss_pred HHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHH------------HHHHHHhcCCCcCCccccchhhhhhHHH
Q 010896 164 GRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTG------------VEALIQKGYKKITPFFIPYSITNMGSAL 231 (498)
Q Consensus 164 a~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~n~~a~~ 231 (498)
+++||+|||+.+ ...+..|+||++|++.++....... ...+.+...+.++|+.++.++.|.++++
T Consensus 81 a~~Al~dAGl~~---~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~ 157 (398)
T PRK06519 81 AGLALDDAGIKG---NEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSNLLAGN 157 (398)
T ss_pred HHHHHHHcCCCC---CCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhhHHHHH
Confidence 999999999943 2345579999999999987654432 2334455677889999999999999999
Q ss_pred HHHhhcCCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCc-CCC
Q 010896 232 LAIDTGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRP-WDK 310 (498)
Q Consensus 232 ia~~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rp-fd~ 310 (498)
|++.||++||+++|+++|+|++.||.+|+++|++|++|++||||+|..++|..+..|..++.++. ..++| ||.
T Consensus 158 is~~~gl~Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~------~~~~p~~d~ 231 (398)
T PRK06519 158 ISIVHKVTGSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLK------GGWAPVWSR 231 (398)
T ss_pred HHHHhCCCCccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCC------CCCCchhcc
Confidence 99999999999999999999999999999999999999999999999899999999999999885 34555 555
Q ss_pred ---CCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEE
Q 010896 311 ---DRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVN 387 (498)
Q Consensus 311 ---~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~ 387 (498)
+++||++|||++++|||++++|++||++|||+|+|++. |.. +. ...++.++|++||++||+ ++|||||+
T Consensus 232 ~~~~r~G~v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~--d~~----~~-~~~~~~~am~~AL~~Agl-~~~IdyI~ 303 (398)
T PRK06519 232 GGEDGGGFILGSGGAFLVLESREHAEARGARPYARISGVES--DRA----RR-APGDLEASLERLLKPAGG-LAAPTAVI 303 (398)
T ss_pred CccCCCCeeeeceEEEEEEeeHHHHHhCCCceEEEEEEEee--cCC----CC-ChHHHHHHHHHHHHHCCC-cccCCEEE
Confidence 69999999999999999999999999999999999964 332 11 345788999999999999 89999999
Q ss_pred ccCCCCccCcHHHHHHHHHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCC
Q 010896 388 AHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPN 467 (498)
Q Consensus 388 ~hgtgt~~~D~~E~~al~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~ 467 (498)
+|||||+.||..|.++|+++|+ .+|+|+|+++||+++|||+++++.++++|++|+|||++|+. |+
T Consensus 304 ahgtgT~~~D~~E~~Ai~~~f~----~pvsS~Ks~~GH~l~AAGa~e~i~~~lal~~g~vpp~~n~~---~~-------- 368 (398)
T PRK06519 304 SGATGAHPATAEEKAALEAALA----GPVRGIGTLFGHTMEAQFPLGLALAALSVSKGALFPPFDAS---GE-------- 368 (398)
T ss_pred eCCCCCCCccHHHHHHHHHHcC----CCccccchhhccchHHHHHHHHHHHHHHHhcCccCCCCCCC---cc--------
Confidence 9999999999999999999996 57999999999999999999999999999999999999972 22
Q ss_pred cccccCccEEEEEccccccceeeEEEee
Q 010896 468 VKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 468 ~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
.++...++.++++++|++|.-.-.+++.
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (398)
T PRK06519 369 KPMSGAAREAVVTTVGHWRGEGMALVEA 396 (398)
T ss_pred cCccccccEEEEEeeccCCcceeEEEEe
Confidence 2245567899999999999877766654
|
|
| >cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-67 Score=545.68 Aligned_cols=393 Identities=31% Similarity=0.489 Sum_probs=349.4
Q ss_pred CcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCC--CCCCCCC----------CcccccccCC---CCCCCC-CCccc
Q 010896 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPID--RFDASSF----------SVRFGGQIRD---FSSKGY-IDGKN 149 (498)
Q Consensus 86 ~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~--~~~~~~~----------~~~~~g~i~~---~d~~~~-i~~~~ 149 (498)
++|+|||||+++|.|.+.++||++|++|++++++++ +|+...+ ...+++.+++ ||+.+| +++++
T Consensus 1 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~ 80 (421)
T cd00833 1 EPIAIVGMACRFPGAADPDEFWENLLEGRDAISEIPEDRWDADGYYPDPGKPGKTYTRRGGFLDDVDAFDAAFFGISPRE 80 (421)
T ss_pred CCEEEEceeeECCCCCCHHHHHHHHHcCCCcCcCCChhHcCccccccccccCCCcceecceecCCcccCCHhHcCCCHHH
Confidence 379999999999999999999999999999999885 5664322 4567788876 666656 89999
Q ss_pred cccCCHHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhH
Q 010896 150 DRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGS 229 (498)
Q Consensus 150 ~~~~d~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a 229 (498)
.++||++++|+++++++||+|||+ ..+.++..++||++|++.+ .+..+..+....+.++.++..+.+..+
T Consensus 81 ~~~~~~~~~l~~~aa~~AL~dAgl---~~~~~~~~~~gv~~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~a 150 (421)
T cd00833 81 AEAMDPQQRLLLEVAWEALEDAGY---SPESLAGSRTGVFVGASSS-------DYLELLARDPDEIDAYAATGTSRAFLA 150 (421)
T ss_pred HHhcCHHHHHHHHHHHHHHHHcCC---CchhcCCCCceEEeCcCHH-------HHHHHHhhcccccCcccccCcchHHHH
Confidence 999999999999999999999999 4456778899999998755 223333444446788888888889999
Q ss_pred HHHHHhhcCCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCC
Q 010896 230 ALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWD 309 (498)
Q Consensus 230 ~~ia~~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd 309 (498)
.++++.+|++||+++++++|+|++.||..|+++|++|++|++||||+|...++..+..|..++.++. ...++|||
T Consensus 151 ~~i~~~~gl~g~~~~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~-----~~~~~pf~ 225 (421)
T cd00833 151 NRISYFFDLRGPSLTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSP-----DGRCRPFD 225 (421)
T ss_pred HHHHHHcCCCCCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCC-----CCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999888888889999988873 56799999
Q ss_pred CCCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEcc
Q 010896 310 KDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAH 389 (498)
Q Consensus 310 ~~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~h 389 (498)
.+++|+++|||++++||+++++|+++|+++|++|+|++.++|+.+...+.|++.++.+++++||+++|++++|||||++|
T Consensus 226 ~~~~g~~~geGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~p~~~~~~~a~~~al~~Agi~~~did~i~~h 305 (421)
T cd00833 226 ADADGYVRGEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDIDYVEAH 305 (421)
T ss_pred CCCCCeeeeceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHCcEEEee
Confidence 99999999999999999999999999999999999999999988666666788899999999999999999999999999
Q ss_pred CCCCccCcHHHHHHHHHHhcCC----CcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcC--
Q 010896 390 ATSTLAGDLAEVNAIKKVFKDT----SEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTID-- 463 (498)
Q Consensus 390 gtgt~~~D~~E~~al~~~f~~~----~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~-- 463 (498)
||||+.+|..|.++|+++|+.. .++++++.|+++||+++|+|++++++++++|++|.+||++|++++++.++++
T Consensus 306 gtgt~~~D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~ 385 (421)
T cd00833 306 GTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGVIPPNLHFETPNPKIDFEES 385 (421)
T ss_pred CCCCCCCCHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHHHHHHhcCCcCCcCCCCCCCCCCCcccC
Confidence 9999999999999999999873 4689999999999999999999999999999999999999999999998853
Q ss_pred --cCCCccccc----CccEEEEEccccccceeeEEE
Q 010896 464 --TVPNVKKQH----HVNVAISNSFGFGGHNSVVVF 493 (498)
Q Consensus 464 --~v~~~~~~~----~~~~alv~s~G~gG~n~~~vl 493 (498)
+++.+.++. .++++++|||||||+|+|+||
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~sfgfgg~n~~~vl 421 (421)
T cd00833 386 PLRVPTEARPWPAPAGPRRAGVSSFGFGGTNAHVIL 421 (421)
T ss_pred CeEeeCCCccCCCCCCCeEEEEeCcCCCCceeEEeC
Confidence 455544433 379999999999999999986
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. |
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-63 Score=517.31 Aligned_cols=392 Identities=24% Similarity=0.394 Sum_probs=348.2
Q ss_pred CCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCC-CCCCCCC--CcccccccCC---CCCCCC-CCccccccCCHHH
Q 010896 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPID-RFDASSF--SVRFGGQIRD---FSSKGY-IDGKNDRRLDDCW 157 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~-~~~~~~~--~~~~~g~i~~---~d~~~~-i~~~~~~~~d~~~ 157 (498)
+++|||+||...+|...++++||.+|+.|.+.+.+-+ ||...-+ | +..|.+++ ||..|| ..+++...||||.
T Consensus 10 ~edIvIsG~sgklPes~nv~eF~~nLl~g~DmVtdd~rrW~~G~ygLP-~r~gKlKdL~kFDa~ff~vh~KQa~~MDPq~ 88 (2376)
T KOG1202|consen 10 QEDIVISGMSGKLPESDNVKEFGDNLLAGVDMVTDDPRRWEAGLYGLP-KRSGKLKDLNKFDAGFFGVHPKQANTMDPQL 88 (2376)
T ss_pred CCcEEEeccCCCCCCcccHHHHhhhhhcccccccCCcccccccccCCc-hhhcchhhhhhhcccccCcCcccccccCHHH
Confidence 6789999999999999999999999999999988765 5665433 3 33345444 999998 9999999999999
Q ss_pred HHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhc
Q 010896 158 RYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTG 237 (498)
Q Consensus 158 ~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lg 237 (498)
||.+++.|||+-|||+ .+..++++++|||+|.+..+..... .++...+..+.+.+....+.+.||++.|+
T Consensus 89 RlLLE~t~EAivDaGi---NP~~LRGs~tGv~vg~s~seTs~~~-------~~dp~t~~Gy~mtgc~raMfaNRiSytFD 158 (2376)
T KOG1202|consen 89 RLLLEATWEAIVDAGI---NPDDLRGSRTGVFVGVSGSETSGAL-------SQDPDTVNGYSMTGCVRAMFANRISYTFD 158 (2376)
T ss_pred HHHHHHHHHHHHhCCC---ChhhcCcccceeEEeecCccccccc-------cCCCccccceeecccHHHHhhcceeEEEe
Confidence 9999999999999999 6678899999999999876654321 33445577778888899999999999999
Q ss_pred CCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccc
Q 010896 238 LMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVM 317 (498)
Q Consensus 238 l~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~ 317 (498)
|+||++.++++|+|++.||..|++.|+.|+||.+||+|++..+.|.....|.++++|+ |++.|+.||+..+||++
T Consensus 159 fqGPS~s~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls-----~dGsCkaFDeagnGY~R 233 (2376)
T KOG1202|consen 159 FQGPSFSVDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLS-----PDGSCKAFDEAGNGYCR 233 (2376)
T ss_pred ccCCchhhhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcC-----CCCcccchhccCCceee
Confidence 9999999999999999999999999999999999999999999999999999999999 58999999999999999
Q ss_pred cceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCC-CCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccC
Q 010896 318 GEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAH-HMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAG 396 (498)
Q Consensus 318 gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~-~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~ 396 (498)
+||+++++|.+...|++ +||.|.-..+|.||+ .....-|+|.-+.+.|++.++++|++|++|-|||+|||||+.|
T Consensus 234 seg~~avllqrk~~ArR----vYAtilnartNTDGfKEqGvTfP~G~~Q~qLi~e~Yse~Gl~P~sv~YvEAHGtGTkVG 309 (2376)
T KOG1202|consen 234 SEGVVAVLLQRKSLARR----VYATILNARTNTDGFKEQGVTFPSGDMQEQLIRETYSEAGLNPESVVYVEAHGTGTKVG 309 (2376)
T ss_pred cCceEEEEEehhHHHHH----HHHHhhccccCCCchhhcCccCCCcHHHHHHHHHHHHhcCCCcccEEEEEeccCCCCCC
Confidence 99999999999888864 689999999999997 3445556788889999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhcC--CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCc--C---cCCCcc
Q 010896 397 DLAEVNAIKKVFKD--TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTI--D---TVPNVK 469 (498)
Q Consensus 397 D~~E~~al~~~f~~--~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~--~---~v~~~~ 469 (498)
|+-|+++|.+.|.. ..++-++|+|+|+||++-|||+..|.|.+++|++|.|||++|+..|||++.- + .|..+.
T Consensus 310 DpQEaN~it~~fC~~Rt~pLLIGSvKSNMGHaEPASGv~alaKillsmE~glip~NLHy~tPNp~ip~L~dGrLkVVd~~ 389 (2376)
T KOG1202|consen 310 DPQEANGITRFFCATRTTPLLIGSVKSNMGHAEPASGVCALAKILLSMEEGLIPPNLHYNTPNPEIPALVDGRLKVVDRP 389 (2376)
T ss_pred ChHHhhhHHHHHhhcCCCceEeeeccccCCCCCccchHHHHHHHHHHHHhCcCCCccccCCCCCCcchhccceeEEecCC
Confidence 99999999999986 3578899999999999999999999999999999999999999999999862 1 133333
Q ss_pred cccCccEEEEEccccccceeeEEEeeC
Q 010896 470 KQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 470 ~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
.+++.-++.+|||||||+|+|+||+.-
T Consensus 390 lp~~GGivGiNSFGFGGsN~HviLks~ 416 (2376)
T KOG1202|consen 390 LPWRGGIVGINSFGFGGSNAHVILKSN 416 (2376)
T ss_pred CCccCceeeeeccccCCCceeEEeccC
Confidence 455667899999999999999999874
|
|
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-43 Score=352.35 Aligned_cols=322 Identities=32% Similarity=0.504 Sum_probs=275.9
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
+++|++.++++||++||++ .........++++|++.+.... ..........+.|+.+.+.+.+..+++|+..
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~---~~~~~~~i~~ii~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 82 (332)
T cd00825 11 VSILGFEAAERAIADAGLS---REYQKNPIVGVVVGTGGGSPRF-----QVFGADAMRAVGPYVVTKAMFPGASGQIATP 82 (332)
T ss_pred HHHHHHHHHHHHHHHcCCC---ccccCCCCEEEEEEeCCccHHH-----HhhhhccccccCcchhhcccchHHHHHHHHH
Confidence 4689999999999999994 2333445679999987655432 2223444567788888888899999999999
Q ss_pred hcCCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCc
Q 010896 236 TGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGF 315 (498)
Q Consensus 236 lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~ 315 (498)
+|++||+++++++|+|++.||+.|+++|++|++|.+||+|+|....+.... +.....+. .|+..++||+...+|+
T Consensus 83 lgl~g~~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~g~ 157 (332)
T cd00825 83 LGIHGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCE-FDAMGALS----TPEKASRTFDAAADGF 157 (332)
T ss_pred hCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHH-HHhhcccc----CCCCCCCCCCCCCCCE
Confidence 999999999999999999999999999999999999999999866555433 33333333 2677889999999999
Q ss_pred cccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCcc
Q 010896 316 VMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLA 395 (498)
Q Consensus 316 v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~ 395 (498)
++|||++++||++.+.|+++|.++|++|.++....++.+...+.+....+.++++++|+++|++++||||++.|++|++.
T Consensus 158 ~~gdGaaA~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~ 237 (332)
T cd00825 158 VFGDGAGALVVEELEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPI 237 (332)
T ss_pred EEEeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCC
Confidence 99999999999999999999999999999999998887665556677888999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCcc
Q 010896 396 GDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVN 475 (498)
Q Consensus 396 ~D~~E~~al~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~ 475 (498)
.|.+|.+++...++. .++++.+.|..+||+.+|+++++++++++.++++.+||+.|+.++++ ..+.+..+.+..+.+
T Consensus 238 ~~~~e~~~~~~~~~~-~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~ 314 (332)
T cd00825 238 GDVKELKLLRSEFGD-KSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEELDE--AGLNIVTETTPRELR 314 (332)
T ss_pred CCHHHHHHHHHHhCC-CCceeECCCcccccchhHhHHHHHHHHHHHHhcCccCCCCCCCCCCc--ccCcccCCCCCCCCC
Confidence 999999999988875 36789999999999999999999999999999999999999999988 333444455556779
Q ss_pred EEEEEccccccceeeEEE
Q 010896 476 VAISNSFGFGGHNSVVVF 493 (498)
Q Consensus 476 ~alv~s~G~gG~n~~~vl 493 (498)
++++++||+||+++++||
T Consensus 315 ~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 315 TALLNGFGLGGTNATLVL 332 (332)
T ss_pred EEEEeeecCCCeeEEEeC
Confidence 999999999999999986
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-42 Score=347.64 Aligned_cols=338 Identities=15% Similarity=0.121 Sum_probs=262.6
Q ss_pred CCCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHH
Q 010896 84 PKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVA 163 (498)
Q Consensus 84 ~~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~a 163 (498)
|+++|+|+|+|+++|.|.+.++.|.+|+.|.+......+++......... ...+-.+......+..+|+..|
T Consensus 1 ~~~~v~I~~~g~vs~lG~~~~~~~aa~ragi~~~~~~~~~~~~~~~~i~~--------~~~~~~~~~~~~~r~~~La~~A 72 (348)
T PRK06147 1 MMRALAIVGSGMVTAVGLDAPSSCAAIRARLDNFQETRFIDPPGGEWLIG--------APVPLPPPWRGPERLAEMAAPA 72 (348)
T ss_pred CCCceEEEecceeecCcCCHHHHHHHHHcccccccccccccCCCCCceEe--------ecCcCCcccCchHHHHHHHHHH
Confidence 45679999999999999999999999999987765544443210100000 0111112223345778999999
Q ss_pred HHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcC--CCC
Q 010896 164 GRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGL--MGP 241 (498)
Q Consensus 164 a~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl--~Gp 241 (498)
.++||++++. .+..+++++++.+..+. +..+. .+.+..+..++..+|+ ++|
T Consensus 73 l~~aL~~a~~-------~~~~~i~lil~~~~~~~----------------~~~~~----~~~~~~~~~~~~~lG~~~~~~ 125 (348)
T PRK06147 73 IAEALEGLPA-------LDASEAPLLLCVAEEER----------------PGRPP----DLEERLLRELEARLGLRLEPG 125 (348)
T ss_pred HHHHHHhccc-------ccccCCcEEEEeCchhc----------------CCCCc----chHHHHHHHHHHHhCCCCCCC
Confidence 9999999983 12234667777542110 01111 1223345667777777 578
Q ss_pred ccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCcccccee
Q 010896 242 NYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGC 321 (498)
Q Consensus 242 ~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGa 321 (498)
+++|.++|+|++.||..|+++|++|++|.+||||+|.+..+..+..|...+.+.. +.+++||++|||+
T Consensus 126 ~~~i~~~casg~~Al~~A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~------------~~~~~G~v~GEGA 193 (348)
T PRK06147 126 SAVIARGRVSGAVALAQARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLT------------SQNSNGFIPGEAA 193 (348)
T ss_pred cccccccchHHHHHHHHHHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCC------------CCCCCceeeeceE
Confidence 8999999999999999999999999999999999999888877888877765543 1368999999999
Q ss_pred EEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCC-CCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHH
Q 010896 322 GILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTD-PRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAE 400 (498)
Q Consensus 322 aavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~-p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E 400 (498)
+++|||++++|++++++||+ .|++...++.+... +.+++.++.++|+++|+++|++++|||||++|+|||+.+|..|
T Consensus 194 ~a~vLe~~~~A~~rga~i~a--~g~~~~~~~~~~~~~~p~~g~gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e 271 (348)
T PRK06147 194 AAVLLGRPAGGEAPGLPLLG--LGLGREPAPVGESEDLPLRGDGLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEA 271 (348)
T ss_pred EEEEEccHhhhhcCCCceEE--EEEeecCCCcccCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHH
Confidence 99999999999999999999 67777777654432 2247889999999999999999999999999999999999999
Q ss_pred HHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEE
Q 010896 401 VNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAIS 479 (498)
Q Consensus 401 ~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv 479 (498)
..++.++|+. ....++++.|+++||+++|+|+++++.++++|++|++|+. ++|+
T Consensus 272 ~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~-------------------------~~L~ 326 (348)
T PRK06147 272 ALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAASRKGYGPGP-------------------------NVLC 326 (348)
T ss_pred HHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHHHcCcCCCC-------------------------cEEE
Confidence 9999999986 3457899999999999999999999999999999998722 3566
Q ss_pred EccccccceeeEEEee
Q 010896 480 NSFGFGGHNSVVVFAP 495 (498)
Q Consensus 480 ~s~G~gG~n~~~vl~~ 495 (498)
.|-.-.|.-+++||++
T Consensus 327 ~s~~d~g~r~a~~l~~ 342 (348)
T PRK06147 327 HLSDDDGARAALVLEY 342 (348)
T ss_pred EecCCCCceEEEEEec
Confidence 6667777778887764
|
|
| >PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=331.16 Aligned_cols=236 Identities=43% Similarity=0.721 Sum_probs=190.1
Q ss_pred CCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCC-CCCCCCC---CcccccccCC----------CCCCCC-CCccc
Q 010896 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPID-RFDASSF---SVRFGGQIRD----------FSSKGY-IDGKN 149 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~-~~~~~~~---~~~~~g~i~~----------~d~~~~-i~~~~ 149 (498)
|++|||||||+++|+|.+.++||++|++|++++++++ ||+...+ +....++++. ||..++ +++++
T Consensus 1 m~~V~ItG~g~~~p~g~~~~~~w~~L~~g~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (254)
T PF00109_consen 1 MRRVVITGMGCVTPGGDGLEEFWEALLSGRSGIRPIPERWDPSDYYDPPSRVAGEIDDKKGGFIDDFDFDAYFFGIPPRE 80 (254)
T ss_dssp -S-EEEEEEEEEBTTBSSHHHHHHHHHTT---EEESCSSSCHTTSTTSSCSEEECBSSSEESSSTTTCGGGTSTCHHHHH
T ss_pred CCEEEEEEEEEECcCCCCHHHHHhhhccCceeeeeeccccccccccccCCcccccccccccceeeecccccccccccchh
Confidence 5789999999999999999999999999999999887 7887776 4566666654 555544 67778
Q ss_pred cccCCHHHHHHHHHHHHHHHHCCCCcccccccCCc-eeEEEEeccCCCchhhHHHHHHHHHhc--CCCcCCccccchhhh
Q 010896 150 DRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRT-RIGVVVGSGMGGLTSFTTGVEALIQKG--YKKITPFFIPYSITN 226 (498)
Q Consensus 150 ~~~~d~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~-~~gv~vGs~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~n 226 (498)
.++||++++|++.++++||+|||+. ...++.. |+||++|++.+.. ..+..+.... .....|+.++.++.|
T Consensus 81 ~~~~~~~~~~~l~aa~~Al~dAg~~---~~~~~~~~r~gv~~G~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~ 153 (254)
T PF00109_consen 81 ARRMDRQSRLALAAAREALEDAGLD---PDDLDGERRVGVFVGSSSGDY----EFYRALDEDGETPRDVSPWFVPNTLPN 153 (254)
T ss_dssp HHTS-HHHHHHHHHHHHHHHHHTST---GGGHTGGGTEEEEEEESSSHH----HHHHHHHHHTTCGGGSHTTHHHHHSTT
T ss_pred hhhhhhhhhHHHHHhhhhccccccc---ccccccccceeeccccccccc----cccccccccccccccccccccCccccc
Confidence 8899999999999999999999994 3344445 5999999988832 3444444444 456666556666999
Q ss_pred hhHHHHHHhhcCCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCC
Q 010896 227 MGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASR 306 (498)
Q Consensus 227 ~~a~~ia~~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~r 306 (498)
.++++|++.||++||+++++++|+||+.||+.|+++|++|++|+|||||+|..++|..+..|.++++++. ++.|+
T Consensus 154 ~~a~~ia~~~gl~G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~-----~~~~~ 228 (254)
T PF00109_consen 154 SAAGRIAILFGLRGPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSA-----DGPCR 228 (254)
T ss_dssp HHHHHHHHHHTB-SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-T-----TSGGG
T ss_pred ccccchhhhcCCCCccccccccccccccccchhccccccccccccccccccccccccccccccccccccc-----ccccc
Confidence 9999999999999999999999999999999999999999999999999998899999999999998885 36799
Q ss_pred cCCCCCCCccccceeEEEEEcchHHH
Q 010896 307 PWDKDRDGFVMGEGCGILVMESLEHA 332 (498)
Q Consensus 307 pfd~~~~G~v~gEGaaavvLe~~~~A 332 (498)
|||.+++|+++|||++++|||++++|
T Consensus 229 pf~~~~~G~v~gEGa~~~vLe~~~~A 254 (254)
T PF00109_consen 229 PFDPFADGFVLGEGAGALVLERLEHA 254 (254)
T ss_dssp STBTTB-SB-BB-EEEEEEEEEHHHH
T ss_pred ccCCCCCCEEEECceEEEEEEEhhhC
Confidence 99999999999999999999999886
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B .... |
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-31 Score=254.07 Aligned_cols=247 Identities=34% Similarity=0.501 Sum_probs=214.3
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
.+.|+.+++++||+++|++ .++++ ++++|++.+.. ..+..+.+++..
T Consensus 7 ~~~l~~~A~~~al~~ag~~---~~~i~----~li~~~~~~~~--------------------------~~~~~a~~i~~~ 53 (254)
T cd00327 7 ASELGFEAAEQAIADAGLS---KGPIV----GVIVGTTGGSG--------------------------EFSGAAGQLAYH 53 (254)
T ss_pred HHHHHHHHHHHHHHHcCCC---CCCce----EEEEEECCCCc--------------------------cccHHHHHHHHH
Confidence 5689999999999999994 33333 78998754321 135677899999
Q ss_pred hcC-CCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCC
Q 010896 236 TGL-MGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDG 314 (498)
Q Consensus 236 lgl-~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G 314 (498)
+|+ ++|+++++++|+|++.||+.|+++|++|++|.+||+|+|.
T Consensus 54 lg~~~~~~~~i~~~C~s~~~al~~A~~~i~~g~~~~~lv~~~e~------------------------------------ 97 (254)
T cd00327 54 LGISGGPAYSVNQACATGLTALALAVQQVQNGKADIVLAGGSEE------------------------------------ 97 (254)
T ss_pred hCCCCCCcceeccHhHHHHHHHHHHHHHHHCCCCCEEEEEecce------------------------------------
Confidence 999 8999999999999999999999999999999999999994
Q ss_pred ccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCc
Q 010896 315 FVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTL 394 (498)
Q Consensus 315 ~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~ 394 (498)
+++|||++++||++.+.+.+++.+++++|.++....++.+.. +.+....+.++++++|+++|++++|||+++.|++++.
T Consensus 98 ~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~ 176 (254)
T cd00327 98 FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMV-PAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTP 176 (254)
T ss_pred eeecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCCCCCCC-CCCChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCc
Confidence 678999999999999999999999999999998877765432 3456778899999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCc
Q 010896 395 AGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHV 474 (498)
Q Consensus 395 ~~D~~E~~al~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~ 474 (498)
..|.+|.+.....++. ..+++.+.+..+||+.+|++.+.+..++++++.+.+||. ..+.
T Consensus 177 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~--------------------~~~~ 235 (254)
T cd00327 177 IGDAVELALGLDPDGV-RSPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPT--------------------PREP 235 (254)
T ss_pred cccHHHHHHHHHHhCC-CCCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCC--------------------CCCc
Confidence 9999998887766654 347899999999999999999999999999999999971 1234
Q ss_pred cEEEEEccccccceeeEEE
Q 010896 475 NVAISNSFGFGGHNSVVVF 493 (498)
Q Consensus 475 ~~alv~s~G~gG~n~~~vl 493 (498)
+.+++++||+||+++++||
T Consensus 236 ~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 236 RTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred CEEEEeeEcCCCcceEEEC
Confidence 7899999999999999985
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-27 Score=240.95 Aligned_cols=268 Identities=24% Similarity=0.326 Sum_probs=201.2
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.+++++||+|+|+ +++++| .|++|+..... ...+ .+..++..+
T Consensus 27 ~~La~~A~~~AL~~agl---~~~dID----~vi~g~~~~~~-------------------------~~~~-~a~~va~~l 73 (393)
T PRK05656 27 VELGAAVIRRLLEQTGL---DPAQVD----EVILGQVLTAG-------------------------AGQN-PARQAAIKA 73 (393)
T ss_pred HHHHHHHHHHHHHHcCC---CHHHCC----EEEEEEecCCC-------------------------CCCc-HHHHHHHHc
Confidence 47999999999999999 445566 68888642100 0112 345688888
Q ss_pred cCCC--CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hhh---------------HHH-----H-hh--
Q 010896 237 GLMG--PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PTG---------------VGG-----F-IA-- 290 (498)
Q Consensus 237 gl~G--p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~~---------------~~~-----~-~~-- 290 (498)
|+.+ |+++|+++|+|++.||+.|+++|++|++|.+||+|+|.+.. |.. +.. + ..
T Consensus 74 Gl~~~~p~~~V~~~Casg~~ai~~A~~~I~sG~~d~vLv~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (393)
T PRK05656 74 GLPHSVPAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFN 153 (393)
T ss_pred CCCCCcceEEecccchhHHHHHHHHHHHHHcCCCCEEEEEEEhhhccCccccccccccccccchhhhhhhcccccccccc
Confidence 9863 89999999999999999999999999999999999996432 100 000 0 00
Q ss_pred ---cc-----c----------------cccC---CCCCCCC-------------------------------------CC
Q 010896 291 ---CR-----A----------------LSQR---NEYPKRA-------------------------------------SR 306 (498)
Q Consensus 291 ---~~-----~----------------ls~~---~~~p~~~-------------------------------------~r 306 (498)
+. . .+.+ ...|.+. .+
T Consensus 154 ~~~~a~~a~~~~~~~gitre~~d~~Av~sh~~a~~a~~~a~~~~ei~pv~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~ 233 (393)
T PRK05656 154 DYHMGITAENLVEKYGISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTTAESLAKLK 233 (393)
T ss_pred CCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEEeccCCCCceEeccCCCCCCCCCHHHHhcCC
Confidence 00 0 0000 0000000 01
Q ss_pred cCCCCCCCcc-------ccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCC
Q 010896 307 PWDKDRDGFV-------MGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVS 379 (498)
Q Consensus 307 pfd~~~~G~v-------~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~ 379 (498)
|+-. .+|.+ ++|||+++||++++.|+++|.+++++|.|++... ..|.+.+.+...+++++|+++||+
T Consensus 234 p~~~-~~g~lt~~~~s~~~DGAaa~vl~s~~~A~~~g~~~~a~i~g~~~~~-----~~~~~~~~~~~~a~~~al~~agl~ 307 (393)
T PRK05656 234 PAFK-KDGSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAG-----VDPAIMGIGPVSATRRCLDKAGWS 307 (393)
T ss_pred CCcC-CCCCEEccccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEec-----CCCcccchhHHHHHHHHHHHcCCC
Confidence 1111 23445 8999999999999999999999999999998875 345556667789999999999999
Q ss_pred CCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCC
Q 010896 380 PEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEP 458 (498)
Q Consensus 380 ~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~ 458 (498)
++||||+|+|.+ +..|..++.+.|+- ..++++++.|..+||+.||+|+..++.++++|+.
T Consensus 308 ~~dId~~e~~d~-----f~~~~~~~~e~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l~~-------------- 368 (393)
T PRK05656 308 LAELDLIEANEA-----FAAQSLAVGKELGWDAAKVNVNGGAIALGHPIGASGCRVLVTLLHEMIR-------------- 368 (393)
T ss_pred HHHCCEEEecCc-----cHHHHHHHHHHhCCCCccCCcCCCHHHhCccHHHHHHHHHHHHHHHHHH--------------
Confidence 999999999954 55777778888874 3578999999999999999999999999998853
Q ss_pred CCCcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 459 EVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 459 ~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
.+.|+++++.+.-||...++||++
T Consensus 369 -------------~~~~~gl~~~c~~gG~g~a~~~e~ 392 (393)
T PRK05656 369 -------------RDAKKGLATLCIGGGQGVALAIER 392 (393)
T ss_pred -------------cCCCEEEEEEcccCcceEEEEEec
Confidence 235789999999999999999985
|
|
| >PRK06633 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.6e-27 Score=238.74 Aligned_cols=266 Identities=22% Similarity=0.310 Sum_probs=192.1
Q ss_pred HHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhc
Q 010896 158 RYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTG 237 (498)
Q Consensus 158 ~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lg 237 (498)
.|+.++.+++|+|+|++ ++.+| .|++|...... .....+..++...|
T Consensus 29 ~L~~~a~~~al~~agi~---~~~Id----~vv~G~~~~~~--------------------------~g~~~~r~~~~~~G 75 (392)
T PRK06633 29 MLAAHLIKDILQNSKID---PALVN----EVILGQVITGG--------------------------SGQNPARQTLIHAG 75 (392)
T ss_pred HHHHHHHHHHHHHcCCC---HHHcC----EEEEEecCccc--------------------------cccHHHHHHHHHCC
Confidence 68999999999999994 44566 58888643211 01123344566788
Q ss_pred CC-C-CccccccccchHHHHHHHHHHHHHcCCCcEEEEecccccc-chhh-H-------H---H-----Hhh--------
Q 010896 238 LM-G-PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAI-IPTG-V-------G---G-----FIA-------- 290 (498)
Q Consensus 238 l~-G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~-~p~~-~-------~---~-----~~~-------- 290 (498)
+. + |.++|+++|+||+.|+..|++.|++|++|++||||+|.+. .|.. . . . +..
T Consensus 76 l~~~~p~~~V~~~CaSG~~Ai~~A~~~I~sG~~dvvla~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (392)
T PRK06633 76 IPKEVPGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLGMHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGV 155 (392)
T ss_pred CCCCccchhhcchhHHHHHHHHHHHHHHHcCCCCEEEEcccccCCCCCcchhcccccccCcchhhhhhcccccccccCcc
Confidence 86 3 8999999999999999999999999999999999999754 2210 0 0 0 000
Q ss_pred -ccc-------------------------------ccc-C-CC-CCC--------------CC-------------CCcC
Q 010896 291 -CRA-------------------------------LSQ-R-NE-YPK--------------RA-------------SRPW 308 (498)
Q Consensus 291 -~~~-------------------------------ls~-~-~~-~p~--------------~~-------------~rpf 308 (498)
++. .+. . ++ .|. +. ...|
T Consensus 156 ~~a~~a~~~~~~~gitre~~d~~Avksh~~a~~np~A~~~~~ei~p~~v~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~~ 235 (392)
T PRK06633 156 FMGITAENISKQFNISRQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKKTTSLFDHDETVRPDTSLEILSKLRPAF 235 (392)
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCcCceeeEEeccCCCceeeccCCCCCCCCCHHHHccCCCcc
Confidence 000 000 0 00 000 00 0011
Q ss_pred CC-----CCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCc
Q 010896 309 DK-----DRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEV 383 (498)
Q Consensus 309 d~-----~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dI 383 (498)
+. ..|...++|||+++||++++.|+++|.+++++|+|++...+ .|...+.+...+++++|+++||+|+||
T Consensus 236 ~~~g~lt~~n~s~~sDGAaalvl~see~A~~~g~~p~a~I~g~~~~~~-----~~~~~~~~~~~a~~~Al~~AGl~p~DI 310 (392)
T PRK06633 236 DKNGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGV-----DPSIMGTAPVPASQKALSKAGWSVNDL 310 (392)
T ss_pred CCCCCEechhcCCccCceEEEEEecHHHHHHCCCCeeEEEEEEEEecC-----CcchhchHHHHHHHHHHHHcCCCHHHc
Confidence 11 01224579999999999999999999999999999998764 233334556889999999999999999
Q ss_pred CEEEccCCCCccCcHHHHHHHH--HHhc-CCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCC
Q 010896 384 NYVNAHATSTLAGDLAEVNAIK--KVFK-DTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEV 460 (498)
Q Consensus 384 d~i~~hgtgt~~~D~~E~~al~--~~f~-~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~ 460 (498)
||+|.| |.+....+. +.++ +..++++++.|..+||+.||+|+++++.++++|+..
T Consensus 311 D~~ei~-------dafa~~~l~~~~~l~~~~~~vN~sGg~~a~GHplgAtG~~~~~~~~~qL~~~--------------- 368 (392)
T PRK06633 311 EVIEVN-------EAFAAQSIYVNREMKWDMEKVNINGGAIAIGHPIGASGGRVLITLIHGLRRA--------------- 368 (392)
T ss_pred Ceeehh-------hHHHHHHHHHHhhhCCCccccCCCCchHhhCCcHHHHHHHHHHHHHHHHHhc---------------
Confidence 999988 666555552 2232 234789999999999999999999999999999761
Q ss_pred CcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 461 TIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 461 ~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
+.++.+++.++-||.-.++||++
T Consensus 369 ------------~~~~g~~~~c~~gG~g~a~~~e~ 391 (392)
T PRK06633 369 ------------KAKKGLVTLCIGGGMGMAMCVEA 391 (392)
T ss_pred ------------CCCeEEEEEecccChhheEEEEe
Confidence 23678888999999999999986
|
|
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-25 Score=228.44 Aligned_cols=270 Identities=21% Similarity=0.304 Sum_probs=195.2
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.+|+++||+|+|++ ++++| .|++|+...... .....+..++..+
T Consensus 28 ~eL~~~A~~~AL~~agi~---~~dID----~vi~g~~~~~~~-------------------------~~~~~a~~~~~~~ 75 (394)
T PRK09051 28 TDLGATVVREALARAGVD---PDQVG----HVVFGHVIPTEP-------------------------RDMYLSRVAAINA 75 (394)
T ss_pred HHHHHHHHHHHHHHcCCC---HHHcC----EEEEeeeccccC-------------------------CCccHHHHHHHHc
Confidence 479999999999999994 45565 578886432110 0011222344556
Q ss_pred cCC--CCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hh---h------------HH----HHhh----
Q 010896 237 GLM--GPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PT---G------------VG----GFIA---- 290 (498)
Q Consensus 237 gl~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~---~------------~~----~~~~---- 290 (498)
|+. -|+++|+++|+|++.|++.|+++|++|.+|.+||+|+|.+.. |. . .. .+..
T Consensus 76 Gl~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLvvG~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (394)
T PRK09051 76 GVPQETPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSRAPYLLPAARWGARMGDAKLVDMMVGALHDPFGT 155 (394)
T ss_pred CCCCCCceEEecccchHHHHHHHHHHHHHHcCCCCEEEEEeehhcccCcccccccccccccCCchhhhhhcccccccccC
Confidence 874 489999999999999999999999999999999999997432 11 0 00 0000
Q ss_pred --cccc---------------------ccC----C-----------------------CCCCCCC------------CcC
Q 010896 291 --CRAL---------------------SQR----N-----------------------EYPKRAS------------RPW 308 (498)
Q Consensus 291 --~~~l---------------------s~~----~-----------------------~~p~~~~------------rpf 308 (498)
++.. +.. + -+|+... +|+
T Consensus 156 ~~~~~~a~~~~~~ygitre~~d~~avksh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~~~da~~r~~~t~e~v~~~~~v 235 (394)
T PRK09051 156 IHMGVTAENVAAKYGISREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKTRKGEVVFDTDEHVRADTTLEDLAKLKPV 235 (394)
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeecCCCCCeEECCCCCCCCCCCHHHHcCCCCc
Confidence 0000 000 0 0133222 233
Q ss_pred CCC-------CCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 010896 309 DKD-------RDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPE 381 (498)
Q Consensus 309 d~~-------~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~ 381 (498)
... .+...++|||+++||++++.|+++|.+++++|+|++.... .|...+.+...+++++|+++||+++
T Consensus 236 ~~~~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~g~~~~~~I~g~~~~~~-----~~~~~~~~~~~a~~~al~~agi~~~ 310 (394)
T PRK09051 236 FKKENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGV-----DPEYMGIGPVPATQKALERAGLTVA 310 (394)
T ss_pred ccCCCccEeCCcCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEecc-----CCCcccccHHHHHHHHHHHcCCCHH
Confidence 221 1223358999999999999999999999999999998763 3334455668899999999999999
Q ss_pred CcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCC
Q 010896 382 EVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEV 460 (498)
Q Consensus 382 dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~ 460 (498)
|||+||.|.. +.++..+..+.|+- ..++++++.+..+||+.||+|+..++.++.+|+..
T Consensus 311 did~~ei~d~-----f~~~~~~~~e~lg~~~~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L~~~--------------- 370 (394)
T PRK09051 311 DLDVIEANEA-----FAAQACAVTRELGLDPAKVNPNGSGISLGHPVGATGAIITVKALYELQRI--------------- 370 (394)
T ss_pred HcCEEEecCc-----cHHHHHHHHHHhCCCccccCCCccHHHhcchHHHHHHHHHHHHHHHHHhc---------------
Confidence 9999999943 33555556677774 35788888888999999999999999999999761
Q ss_pred CcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 461 TIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 461 ~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
+.++.+++.+.-||...++||++
T Consensus 371 ------------~~~~g~~~~c~~gG~g~a~~~e~ 393 (394)
T PRK09051 371 ------------GGRYALVTMCIGGGQGIAAIFER 393 (394)
T ss_pred ------------CCCEEEEEEccccChhhEEEEEe
Confidence 23678899999999999999986
|
|
| >PRK09052 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-24 Score=223.41 Aligned_cols=268 Identities=19% Similarity=0.272 Sum_probs=189.2
Q ss_pred HHHHHHHHHHHHHHC-CCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 157 WRYCLVAGRRALEEA-SLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 157 ~~l~l~aa~~AL~dA-G~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
..|+.+++++||+++ |+ +++++| .|++|+..... . .....+..+...
T Consensus 32 ~eLa~~A~~~AL~~a~gl---~~~dID----~vi~g~~~~~~----------------------~---~~~~~ar~~~~~ 79 (399)
T PRK09052 32 DDLLAHVLRSAVAQVPGL---DPKLIE----DAIVGCAMPEA----------------------E---QGLNVARIGALL 79 (399)
T ss_pred HHHHHHHHHHHHHhccCc---CHHHCC----EEEEEecCCCC----------------------C---CCchHHHHHHHH
Confidence 479999999999997 99 445566 68888642210 0 011122234445
Q ss_pred hcCCC--CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchh--------h--H------------HHHhhc
Q 010896 236 TGLMG--PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPT--------G--V------------GGFIAC 291 (498)
Q Consensus 236 lgl~G--p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~--------~--~------------~~~~~~ 291 (498)
+|+.. |+++|+++|+|++.|++.|+++|++|++|++||+|+|.+.... . + +.....
T Consensus 80 ~Gl~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 159 (399)
T PRK09052 80 AGLPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPMMGNKPSMSPAIFARDENVGIAYGMGLTAE 159 (399)
T ss_pred cCCCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccccCcccCcccccCcchhccCCcccccchHHHHHH
Confidence 68853 7999999999999999999999999999999999999642210 0 0 000000
Q ss_pred cc----------------cc-------cCC------CCCCCC--C------------Cc---------------------
Q 010896 292 RA----------------LS-------QRN------EYPKRA--S------------RP--------------------- 307 (498)
Q Consensus 292 ~~----------------ls-------~~~------~~p~~~--~------------rp--------------------- 307 (498)
.. .+ .+. -.|.+. . .|
T Consensus 160 ~~~~~ygitre~~d~~a~~sh~~a~~n~~ag~~~~ei~~~~v~~~~~~~~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~ 239 (399)
T PRK09052 160 KVAEQWKVSREDQDAFALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLK 239 (399)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEeccccccccccCcccccceEeccCCCCCCCCCHHHHhcCC
Confidence 00 00 000 001100 0 00
Q ss_pred --CCC-----CCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCC
Q 010896 308 --WDK-----DRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSP 380 (498)
Q Consensus 308 --fd~-----~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~ 380 (498)
|+. ..|...++|||+++||++++.|+++|.+++++|.|++.... .|...+.+...+++++|++|||++
T Consensus 240 p~f~~~g~lt~~n~s~~~DGAaa~vl~se~~a~~~g~~~~a~i~g~~~~~~-----~~~~~~~~~~~A~~~al~~Agi~~ 314 (399)
T PRK09052 240 PVFANKGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGV-----PPEIMGIGPIEAIPAALKQAGLKQ 314 (399)
T ss_pred CccCCCCcEECCccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEecc-----CCCccchhHHHHHHHHHHHcCCCH
Confidence 110 01225579999999999999999999999999999998753 344455577899999999999999
Q ss_pred CCcCEEEccCCCCccCcHHHHHHH--HHHhcCCCccccccccc--ccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCC
Q 010896 381 EEVNYVNAHATSTLAGDLAEVNAI--KKVFKDTSEMKMNGTKS--MIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNL 456 (498)
Q Consensus 381 ~dId~i~~hgtgt~~~D~~E~~al--~~~f~~~~~~~v~s~K~--~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~ 456 (498)
+|||++|.| |.++.+.+ .+.|+- ...+++..++ .+||+.||+|+++++.++++|+++
T Consensus 315 ~did~~ei~-------D~f~~~~l~~~e~lg~-~~~~vN~~GG~la~GHp~gasG~~~~~~~~~~L~~~----------- 375 (399)
T PRK09052 315 DDLDWIELN-------EAFAAQSLAVIRDLGL-DPSKVNPLGGAIALGHPLGATGAIRTATVVHGLRRT----------- 375 (399)
T ss_pred HHcCEEEeC-------cHHHHHHHHHHHHhCC-CCcccCCCCchhhcCchHHHHHHHHHHHHHHHHHhc-----------
Confidence 999999988 88766554 455663 1234454454 789999999999999999999772
Q ss_pred CCCCCcCcCCCcccccCccEEEEEccccccceeeEEEeeC
Q 010896 457 EPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 457 ~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
+.++.+++.++-||.-.++||+++
T Consensus 376 ----------------~~~~g~~~~c~~gg~g~a~~~e~~ 399 (399)
T PRK09052 376 ----------------NLKYGMVTMCVGTGMGAAGIFERL 399 (399)
T ss_pred ----------------CCCeEEEEEcccCCceeEEEEEeC
Confidence 236788999999999999999874
|
|
| >PRK13359 beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.8e-25 Score=224.31 Aligned_cols=267 Identities=19% Similarity=0.238 Sum_probs=193.2
Q ss_pred HHHHHHHHHHHH-HCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 158 RYCLVAGRRALE-EASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 158 ~l~l~aa~~AL~-dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
.|+.++.+++|+ ++|+ +++.+| .|++|...... .....++..++...
T Consensus 28 ~L~~~a~~~al~r~a~i---~~~~Id----~vi~G~~~~~~-------------------------~~g~~~ar~~~l~~ 75 (400)
T PRK13359 28 DLGAVPLKALVERNPDV---DWAAID----DVIYGCANQAG-------------------------EDNRNVARMSLLLA 75 (400)
T ss_pred HHHHHHHHHHHHhccCC---CHHHCC----EEEEEeccccc-------------------------cccccHHHHHHHHc
Confidence 688899999999 5799 445566 68888632110 00123455667778
Q ss_pred cCCC--CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hhhH------H---------------------
Q 010896 237 GLMG--PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PTGV------G--------------------- 286 (498)
Q Consensus 237 gl~G--p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~~~------~--------------------- 286 (498)
||.. |.++|+++|+||+.|+..|++.|++|++|++|+||+|.+.. |+.+ .
T Consensus 76 Gl~~~vp~~tV~~~CaSG~~Av~~A~~~I~sG~~divlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (400)
T PRK13359 76 GLPHGVPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMK 155 (400)
T ss_pred CCCCCCceEEEeccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCccccccccccccCCcccccccccccccCCccc
Confidence 8864 89999999999999999999999999999999999998533 3100 0
Q ss_pred H-Hhh--cc-----------c----------cccC---CCCCC-------------------------CCC---------
Q 010896 287 G-FIA--CR-----------A----------LSQR---NEYPK-------------------------RAS--------- 305 (498)
Q Consensus 287 ~-~~~--~~-----------~----------ls~~---~~~p~-------------------------~~~--------- 305 (498)
. |.. |+ . .|.. ...|. +..
T Consensus 156 ~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~Sh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~De~~r~~t~e~l~ 235 (400)
T PRK13359 156 QLYGVDSMPETAENVATDYNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDPLVVSRDEHPRETTLEALA 235 (400)
T ss_pred cccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCCccceeeeeeccCCCCceeecCCCCCCCCCHHHHh
Confidence 0 000 00 0 0000 00000 000
Q ss_pred --C-cCCCC-----CCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcC
Q 010896 306 --R-PWDKD-----RDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAG 377 (498)
Q Consensus 306 --r-pfd~~-----~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Ag 377 (498)
+ .|+.+ .+...++|||+++||++++.|+++|.+++++|+|++... ..|.+.+.+...+++++|+++|
T Consensus 236 ~l~p~f~~~g~lT~~n~~~~~DGAaa~vL~s~e~A~~~g~~~~a~I~g~~~~~-----~~p~~~~~~~~~A~~~al~~AG 310 (400)
T PRK13359 236 KLKGVVRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAG-----VEPRVMGIGPAPATQKLLARLG 310 (400)
T ss_pred cCCCccCCCCceecccccCccCceEEEEEecHHHHHHCCCCccEEEEEEEEec-----CCCCccchhHHHHHHHHHHHhC
Confidence 1 12221 122236899999999999999999999999999998874 2355566777899999999999
Q ss_pred CCCCCcCEEEccCCCCccCcHHHHHHHH--HHhcC-CCcccccccccc--cCCcchhhhHHHHHHHHHHhhcCccCCCCC
Q 010896 378 VSPEEVNYVNAHATSTLAGDLAEVNAIK--KVFKD-TSEMKMNGTKSM--IGHGLGAAGGLEAITTIKAITTGWLHPTLN 452 (498)
Q Consensus 378 l~~~dId~i~~hgtgt~~~D~~E~~al~--~~f~~-~~~~~v~s~K~~--~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~ 452 (498)
++++||||||.| |.++...+. +.|+- ....+++..++. +||+.+|+|+..++.++.+|+..
T Consensus 311 l~~~DID~iei~-------dafa~~~l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL~~~------- 376 (400)
T PRK13359 311 MTLDQFDVIELN-------EAFASQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALYQLERT------- 376 (400)
T ss_pred CCHHHcCcCccC-------cHhHHHHHHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHHHHhhc-------
Confidence 999999999988 888876654 45652 124677777775 89999999999999999999751
Q ss_pred CCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 453 QDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 453 ~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
+.++.+++.++-||.-.++||++
T Consensus 377 --------------------~~~~g~~~~c~~gG~g~a~~ie~ 399 (400)
T PRK13359 377 --------------------GGRFALCTMCIGVGQGIAIAIER 399 (400)
T ss_pred --------------------CCCeEEEEEcccCCceeEEEEEe
Confidence 34678889999999999999986
|
|
| >cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.1e-25 Score=225.96 Aligned_cols=269 Identities=22% Similarity=0.292 Sum_probs=194.8
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.+|+++||+|+|+ +++++| ++++|+..+.. . ....+..++..+
T Consensus 23 ~~La~~A~~~AL~dAgl---~~~dID----~vi~~~~~~~~---------------------~-----~~~~a~~v~~~l 69 (386)
T cd00751 23 DDLGAAVIKALLERAGL---DPEEVD----DVIMGNVLQAG---------------------E-----GQNPARQAALLA 69 (386)
T ss_pred HHHHHHHHHHHHHhcCC---CHHHCC----EEEEEeccCCC---------------------C-----CChHHHHHHHHc
Confidence 58999999999999999 445566 67777532211 0 112345688889
Q ss_pred cCCC--CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hh----------------------hH------
Q 010896 237 GLMG--PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PT----------------------GV------ 285 (498)
Q Consensus 237 gl~G--p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~----------------------~~------ 285 (498)
|++. |.++|+++|+|++.+|..|+.+|++|++|.+||+|+|.+.. +. .+
T Consensus 70 Gl~~~~~~~~v~~~c~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (386)
T cd00751 70 GLPESVPATTVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTG 149 (386)
T ss_pred CCCCCCchhhhccccHHHHHHHHHHHHHHHCCCCCeEEEeeeeccccCcccccccccccccCccccccccccccccccCC
Confidence 9975 89999999999999999999999999999999999886311 10 00
Q ss_pred --HHHhhccccccC--------------------CC-----------------------CCCCCCC------------cC
Q 010896 286 --GGFIACRALSQR--------------------NE-----------------------YPKRASR------------PW 308 (498)
Q Consensus 286 --~~~~~~~~ls~~--------------------~~-----------------------~p~~~~r------------pf 308 (498)
..+.....+..+ +. .|+...| |.
T Consensus 150 ~~~a~~a~~~~~~yg~tre~la~vav~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~a~~r~~~t~e~v~~s~~i 229 (386)
T cd00751 150 LSMGITAENVAEKYGISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRPDTTLEKLAKLKPA 229 (386)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCC
Confidence 000000000000 00 0111111 11
Q ss_pred -C-----CCCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 010896 309 -D-----KDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEE 382 (498)
Q Consensus 309 -d-----~~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~d 382 (498)
+ ...|...++||++++||++++.|++++.+++++|+|++.+++.. .....+...+++++|+++||+|+|
T Consensus 230 ~~p~g~l~~~d~~~~~dGaaavvl~s~~~a~~~~~~~~~~I~g~~~~~~~~-----~~~~~~~~~a~~~a~~~Agi~~~d 304 (386)
T cd00751 230 FKKDGTVTAGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDP-----AIMGIGPVPAIPKALKRAGLTLDD 304 (386)
T ss_pred cCCCCcEeCCcCCCCCcceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCC-----cccchhHHHHHHHHHHHcCCCHHH
Confidence 1 11344557999999999999999999999999999999987643 223445578999999999999999
Q ss_pred cCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCC
Q 010896 383 VNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVT 461 (498)
Q Consensus 383 Id~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~ 461 (498)
||++|+|.+.+.. | ....+.|+- ..++++++.+..+||+.+|+|+.++++++++|+..
T Consensus 305 id~~e~~d~f~~~----~-~~~~e~lg~~~~pvn~~GG~l~~Gh~~gasG~~~~~e~~~qL~g~---------------- 363 (386)
T cd00751 305 IDLIEINEAFAAQ----A-LACLKELGLDPEKVNVNGGAIALGHPLGASGARIVVTLLHELKRR---------------- 363 (386)
T ss_pred cCEEEeechhHHH----H-HHHHHHhCCChhhcCCCcchHhhCccHHHHHHHHHHHHHHHHHhc----------------
Confidence 9999999554321 2 222344553 23688899999999999999999999999999872
Q ss_pred cCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 462 IDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 462 ~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
..++++++..+-||..+++|||+
T Consensus 364 -----------~~~~gl~~~~~~gg~g~~~~ie~ 386 (386)
T cd00751 364 -----------GGRYGLATMCIGGGQGAAMVIER 386 (386)
T ss_pred -----------CCCEEEEEEcccccceEEEEEEC
Confidence 34789999999999999999984
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK07661 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-24 Score=222.54 Aligned_cols=269 Identities=19% Similarity=0.266 Sum_probs=198.0
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.+++++||+|+|+. .+++| .+++|+..... .. ....+.+++..+
T Consensus 28 ~eLa~~A~~~AL~~ag~~---~~dID----~vi~g~~~~~~----------------------~~---g~~~a~~~~~~l 75 (391)
T PRK07661 28 DDLGALVVKETLKRAGNY---EGPID----DLIIGCAMPEA----------------------EQ---GLNMARNIGALA 75 (391)
T ss_pred HHHHHHHHHHHHHhcCCC---hhHCC----EEEEEeccccc----------------------cc---cchHHHHHHHHc
Confidence 479999999999999873 24555 57888532110 00 012244577888
Q ss_pred cCCC--CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hh----------------hH---HHHhhccc-
Q 010896 237 GLMG--PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PT----------------GV---GGFIACRA- 293 (498)
Q Consensus 237 gl~G--p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~----------------~~---~~~~~~~~- 293 (498)
|+.. |.++|+++|+||+.|+..|++.|++|++|++||+|+|.+.. |. .+ .++...+.
T Consensus 76 Gl~~~~p~~~V~~aCaSG~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~ 155 (391)
T PRK07661 76 GLPYTVPAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLVPMMGHVVRPNPRLVEAAPEYYMGMGHTAEQVA 155 (391)
T ss_pred CCCCCcceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEEEEeecccCCccccccCCCccccccccchhhhHHHHHHHHH
Confidence 9873 99999999999999999999999999999999999997432 10 00 00000000
Q ss_pred ---------------------c-ccCC----C--------CC-----------------CCCC------------CcC-C
Q 010896 294 ---------------------L-SQRN----E--------YP-----------------KRAS------------RPW-D 309 (498)
Q Consensus 294 ---------------------l-s~~~----~--------~p-----------------~~~~------------rpf-d 309 (498)
. ..+. . .+ ++.. +|. .
T Consensus 156 ~~~g~tre~~a~~av~s~~~a~~n~~ag~~~~ei~pi~~~~~~~~~~~~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~f~ 235 (391)
T PRK07661 156 VKYGISREDQDAFAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGKLRPAFN 235 (391)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeecccccccccCcccccceeEecCCCCCCCCCHHHHhcCCCCcC
Confidence 0 0000 0 00 0000 111 0
Q ss_pred -----CCCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcC
Q 010896 310 -----KDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVN 384 (498)
Q Consensus 310 -----~~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId 384 (498)
...+...++|||+++||++++.|+++|.+++++|+|++...+ .|...+.+...+++++|+++||+++|||
T Consensus 236 ~~g~lt~~~~~~~~DGAaavvl~s~~~A~~~g~~~~~~i~g~~~~~~-----~~~~~~~~~~~a~~~al~~agl~~~did 310 (391)
T PRK07661 236 VKGSVTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGV-----PPEVMGIGPIAAIPKALKLAGLELSDIG 310 (391)
T ss_pred CCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecC-----CCcccchHHHHHHHHHHHHcCCCHHHCC
Confidence 112334478999999999999999999999999999998863 3334455678999999999999999999
Q ss_pred EEEccCCCCccCcHHHHHHHHH--HhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCC
Q 010896 385 YVNAHATSTLAGDLAEVNAIKK--VFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVT 461 (498)
Q Consensus 385 ~i~~hgtgt~~~D~~E~~al~~--~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~ 461 (498)
+||.| |.++...+.. .|+- ..++++++.+..+||+.||+|+..++.++++|+.+
T Consensus 311 ~~ei~-------d~f~~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL~~~---------------- 367 (391)
T PRK07661 311 LFELN-------EAFASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKRR---------------- 367 (391)
T ss_pred EEEeC-------CHHHHHHHHHHHHcCCCCCCCCCCCChHHhCCcHHHHHHHHHHHHHHHHHhc----------------
Confidence 99988 9999888874 5653 35789999999999999999999999999999751
Q ss_pred cCcCCCcccccCccEEEEEccccccceeeEEEeeC
Q 010896 462 IDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 462 ~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
+.++.+.+.++-||.-.++||++.
T Consensus 368 -----------~~~~g~~~~c~~gg~g~a~~~e~~ 391 (391)
T PRK07661 368 -----------NEQFGIVTMCIGGGMGAAGVFELL 391 (391)
T ss_pred -----------CCCeEEEEEccccChhhEEEEEeC
Confidence 236788899999999999999863
|
|
| >PRK05790 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-24 Score=224.33 Aligned_cols=268 Identities=24% Similarity=0.314 Sum_probs=193.1
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.+|+++||+|||+ +++++| ++++|+...... ....+..+...+
T Consensus 27 ~~La~~A~~~AL~dAgl---~~~dID----~vi~g~~~~~~~--------------------------~~~~~~~~~~~~ 73 (393)
T PRK05790 27 VELGAIVIKAALERAGV---PPEQVD----EVIMGQVLQAGA--------------------------GQNPARQAALKA 73 (393)
T ss_pred HHHHHHHHHHHHHHcCC---CHHHCC----eEEEEEecCCCC--------------------------CCcHHHHHHHHc
Confidence 47999999999999999 445666 677876421000 001122244456
Q ss_pred cCC--CCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccch-hh--------------H--------------
Q 010896 237 GLM--GPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIP-TG--------------V-------------- 285 (498)
Q Consensus 237 gl~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p-~~--------------~-------------- 285 (498)
|+. -|.++++.+|+|++.||..|+++|++|++|.+||+|+|.+... .. .
T Consensus 74 gl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (393)
T PRK05790 74 GLPVEVPALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFN 153 (393)
T ss_pred CCCCCCceeeecccchHHHHHHHHHHHHHHcCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccC
Confidence 764 4899999999999999999999999999999999999863110 00 0
Q ss_pred ---HHHhhccccccC----------------------CC----------------------CCCCCCC------c-----
Q 010896 286 ---GGFIACRALSQR----------------------NE----------------------YPKRASR------P----- 307 (498)
Q Consensus 286 ---~~~~~~~~ls~~----------------------~~----------------------~p~~~~r------p----- 307 (498)
..+...+.+..+ +. ++++..+ |
T Consensus 154 ~~~~a~~a~~y~~~yG~tre~la~vav~~~~~A~~~~~~g~~~~~i~P~~~~~~~~~~~~~~~d~~~~~~~~~e~l~~~~ 233 (393)
T PRK05790 154 GYHMGITAENLAEQYGITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDTDEHPRPDTTAESLAKLR 233 (393)
T ss_pred CCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeEEecCCCCCceEecCCCCCCCCCCHHHHhCCC
Confidence 000000000000 00 0000000 1
Q ss_pred --CCC-----CCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCC
Q 010896 308 --WDK-----DRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSP 380 (498)
Q Consensus 308 --fd~-----~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~ 380 (498)
||. ..|...++||++++||++++.|++++.+++++|+|++.... .|...+.+...+++++|+++|+++
T Consensus 234 ~v~~~~g~lt~~d~~~~~DGAaavvl~s~e~a~~~~~~~~~~I~g~~~~~~-----~~~~~~~~~~~a~~~a~~~Agi~~ 308 (393)
T PRK05790 234 PAFDKDGTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGV-----DPAIMGIGPVPAIRKALEKAGWSL 308 (393)
T ss_pred CccCCCCCEeCCcCCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEccC-----CCCccchhHHHHHHHHHHHcCCCH
Confidence 111 01455689999999999999999999999999999988752 233334456789999999999999
Q ss_pred CCcCEEEccCCCCccCcHHHHHHH--HHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCC
Q 010896 381 EEVNYVNAHATSTLAGDLAEVNAI--KKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLE 457 (498)
Q Consensus 381 ~dId~i~~hgtgt~~~D~~E~~al--~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~ 457 (498)
+|||++|.| |.++...+ .+.|+- ..++++++.+..+||+.||+|+..++.++.+|+..
T Consensus 309 ~did~~e~~-------d~f~~~~l~~~e~lg~~~~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL~~~------------ 369 (393)
T PRK05790 309 ADLDLIEIN-------EAFAAQALAVEKELGLDPEKVNVNGGAIALGHPIGASGARILVTLLHEMKRR------------ 369 (393)
T ss_pred HHCCEEEeC-------cHHHHHHHHHHHHhCCChhhcCCCcchhhhCcchhhhHHHHHHHHHHHHHhc------------
Confidence 999999999 77776653 345652 35789999999999999999999999999999873
Q ss_pred CCCCcCcCCCcccccCccEEEEEccccccceeeEEEeeC
Q 010896 458 PEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 458 ~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
+.|+++++..|-||..+++|||++
T Consensus 370 ---------------~~~~gl~~~~~~~g~g~~~~~e~~ 393 (393)
T PRK05790 370 ---------------GAKKGLATLCIGGGQGVALIVERP 393 (393)
T ss_pred ---------------CCCeEEEEEeccCCceeEEEEEcC
Confidence 237899999999999999999974
|
|
| >PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-26 Score=198.46 Aligned_cols=115 Identities=35% Similarity=0.538 Sum_probs=98.3
Q ss_pred EEEEEeEEEecCC-CCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcCC---Cccc
Q 010896 340 IAEYLGGAVTCDA-HHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDT---SEMK 415 (498)
Q Consensus 340 ~a~I~g~~~~~dg-~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~~---~~~~ 415 (498)
||+|+|+++++|+ .+.+.+.|++.++.++|++||+++|++|+|||||++||+||+.+|..|.++|.++|++. .+++
T Consensus 1 ya~i~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~ 80 (119)
T PF02801_consen 1 YAVIRGYGVNSDGARSSSLTAPNGAALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVP 80 (119)
T ss_dssp SEEEEEEEEEE-SSSTSSSSSTTHHHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSE
T ss_pred CEEEEEEEEECCCCCCCCCcCcCHHHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccc
Confidence 7999999999999 78888889999999999999999999999999999999999999999999999999973 3699
Q ss_pred ccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCC
Q 010896 416 MNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQD 454 (498)
Q Consensus 416 v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~ 454 (498)
|++.|+++||+++|||+++|++++++|++++|||++|++
T Consensus 81 v~s~K~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~n~~ 119 (119)
T PF02801_consen 81 VGSVKSNIGHTEAASGLLSLAKALLALEHGTIPPTINFE 119 (119)
T ss_dssp EE-THHHH-B-GGGHHHHHHHHHHHHHHHTEE--BTT-S
T ss_pred eeccccccccccccchHHHHHHHHHHHhcCCCCCCcCCC
Confidence 999999999999999999999999999999999999975
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A .... |
| >PRK08242 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-24 Score=220.73 Aligned_cols=268 Identities=19% Similarity=0.228 Sum_probs=193.6
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.++++++|+++|++ ++++| -|++|+...... .....+...+...
T Consensus 29 ~dLa~~A~~~al~~agi~---p~~ID----~vi~G~~~~~~~-------------------------~~~~~~r~a~~~~ 76 (402)
T PRK08242 29 VRLAAGLLEALRDRNGLD---TAAVD----DVVLGCVTPVGD-------------------------QGADIARTAVLAA 76 (402)
T ss_pred HHHHHHHHHHHHHHcCCC---HHHcC----EEEEEecCCCcc-------------------------ccccHHHHHHHHc
Confidence 378999999999999994 44555 578886432100 0112233344556
Q ss_pred cCC--CCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hhh----------HHH----Hhhcc-------
Q 010896 237 GLM--GPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PTG----------VGG----FIACR------- 292 (498)
Q Consensus 237 gl~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~~----------~~~----~~~~~------- 292 (498)
|+. -|.++|+.+|+|++.||..|+++|++|++|.+|++|+|.+.. |.. +.. +..|+
T Consensus 77 Gl~~~~pa~~Vn~aCaSg~~Ai~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~a 156 (402)
T PRK08242 77 GLPETVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPMGSDGGAWAMDPSTNFPTYFVPQGISADLIA 156 (402)
T ss_pred CCCCCCCeEEEcchhhhHHHHHHHHHHHHHcCCCCEEEEEEEEccCCCcccccCcccccCcccccccccCCHHHHHHHHH
Confidence 772 389999999999999999999999999999999999997532 210 000 00000
Q ss_pred --------------------ccc----------------cCC---CCCCCCC------------Cc-CCCCC--------
Q 010896 293 --------------------ALS----------------QRN---EYPKRAS------------RP-WDKDR-------- 312 (498)
Q Consensus 293 --------------------~ls----------------~~~---~~p~~~~------------rp-fd~~~-------- 312 (498)
... +++ .++++.. +| |+...
T Consensus 157 ~~~gisRe~~d~~A~~Sh~~A~~A~~~g~f~~ei~pv~~~~~~~~~~~de~~r~~~t~e~l~~l~p~f~~~~~~~g~~~~ 236 (402)
T PRK08242 157 TKYGFSREDVDAYAVESQQRAAAAWAEGYFAKSVVPVKDQNGLTILDHDEHMRPGTTMESLAKLKPSFAMMGEMGGFDAV 236 (402)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeecCCCCEeeCCCCCCCCCCCHHHHhCCCCCccCccccCccccc
Confidence 010 000 1222222 22 33211
Q ss_pred ------------------CCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHH
Q 010896 313 ------------------DGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLE 374 (498)
Q Consensus 313 ------------------~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~ 374 (498)
+...+.|||+++||++++.|+++|.+++++|.|++...+. |...+.+...+++++|+
T Consensus 237 ~~~~~~~~~~~~~~vTagn~s~~~DGAaAlvl~s~e~A~~~g~~p~a~I~g~~~~~~~-----~~~~~~~~~~a~~~al~ 311 (402)
T PRK08242 237 ALQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVATATIGSD-----PTIMLTGPVPATRKALA 311 (402)
T ss_pred ccccccccccccCceecCcCCCCCCceEEEEEecHHHHHHcCCCCcEEEEEEEEecCC-----chhhcccHHHHHHHHHH
Confidence 3335789999999999999999999999999999887642 22223344679999999
Q ss_pred HcCCCCCCcCEEEccCCCCccCcHHHHHHHH--HHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCC
Q 010896 375 DAGVSPEEVNYVNAHATSTLAGDLAEVNAIK--KVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTL 451 (498)
Q Consensus 375 ~Agl~~~dId~i~~hgtgt~~~D~~E~~al~--~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~ 451 (498)
++||+++|||++|.| |.++...+. +.|+- ..++++++.+..+||+.||+|+..++.++++|+.+
T Consensus 312 ~AGl~~~DID~~ei~-------daFa~~~l~~~e~lG~~~~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~~~------ 378 (402)
T PRK08242 312 KAGLTVDDIDLFELN-------EAFASVVLRFMQALDIPHDKVNVNGGAIAMGHPLGATGAMILGTVLDELERR------ 378 (402)
T ss_pred HcCCCHHHCCEEEec-------chhhHHHHHHHHHhCCCCcCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHHhc------
Confidence 999999999999998 777775553 45552 35789999999999999999999999999999751
Q ss_pred CCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 452 NQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 452 ~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
+.++.+++.+.-||...++||++
T Consensus 379 ---------------------~~~~g~~~~c~ggG~g~a~~~e~ 401 (402)
T PRK08242 379 ---------------------GKRTALITLCVGGGMGIATIIER 401 (402)
T ss_pred ---------------------CCCeEEEEEcccCCceeEEEEEe
Confidence 33678899999999999999986
|
|
| >PRK06064 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-24 Score=222.97 Aligned_cols=288 Identities=21% Similarity=0.278 Sum_probs=198.2
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.+++++||+|+|+ +++++| ++++|+..++... .....+..++..+
T Consensus 23 ~eLa~~a~~~Al~dagl---~~~~Id----~vi~g~~~~~~~~------------------------~~~~~a~~va~~l 71 (389)
T PRK06064 23 RDLAVEAGLEALEDAGI---DGKDID----AMYVGNMSAGLFV------------------------SQEHIAALIADYA 71 (389)
T ss_pred HHHHHHHHHHHHHHcCC---CHHHCC----EEEEEeccccccc------------------------ccccHHHHHHHHc
Confidence 57899999999999999 444565 6778764322110 0012456788889
Q ss_pred cCC-CCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hh-------------------h-----HHHHhh
Q 010896 237 GLM-GPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PT-------------------G-----VGGFIA 290 (498)
Q Consensus 237 gl~-Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~-------------------~-----~~~~~~ 290 (498)
|++ +|.++|+++|+|++.||..|+++|++|++|.+||+|.|.+.. +. . ...+..
T Consensus 72 Gl~~~~~~~v~~aCasg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a 151 (389)
T PRK06064 72 GLAPIPATRVEAACASGGAALRQAYLAVASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEFFGATFPGLYALIA 151 (389)
T ss_pred CCCCCCeeEEeCCcHHHHHHHHHHHHHHHCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccccCCchHHHHHHHH
Confidence 998 599999999999999999999999999999999999985211 10 0 000000
Q ss_pred ccccccCC------------------CCCCC----------------CCCcCCCCCCCccccceeEEEEEcchHHHHhcC
Q 010896 291 CRALSQRN------------------EYPKR----------------ASRPWDKDRDGFVMGEGCGILVMESLEHAMKRG 336 (498)
Q Consensus 291 ~~~ls~~~------------------~~p~~----------------~~rpfd~~~~G~v~gEGaaavvLe~~~~A~~~g 336 (498)
...+..++ ..|.. .+.|+. ..|...++|||+++||++++.|++++
T Consensus 152 ~~~~~~yG~s~e~~a~~a~~~~~~A~~np~a~~~~~~t~~~~~~s~~i~~Pl~-~~d~~~~~dGAaa~vL~s~~~A~~~~ 230 (389)
T PRK06064 152 RRYMHKYGTTEEDLALVAVKNHYNGSKNPYAQFQKEITVEQVLNSPPVADPLK-LLDCSPITDGAAAVILASEEKAKEYT 230 (389)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHhhCcHhhhCCCCCHHHHhcCCcccCCCc-hhhcCCCCCcceEEEEecHHHHHHhc
Confidence 00000000 00110 011222 23556789999999999999999988
Q ss_pred CcEEEEEEeEEEecCCCCCCCC-C-CChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhc-----
Q 010896 337 ANIIAEYLGGAVTCDAHHMTDP-R-SDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFK----- 409 (498)
Q Consensus 337 ~~i~a~I~g~~~~~dg~~~~~p-~-~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~----- 409 (498)
.++ .+|+|++...+..+.... + +...+...+++++|+++||+++|||++|.|+++|.. +.++.+++.-...
T Consensus 231 ~~~-v~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did~~e~~d~ft~~-~~~~~e~lgl~~~G~~~~ 308 (389)
T PRK06064 231 DTP-VWIKASGQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDIDVAEVHDCFTIA-EILAYEDLGFAKKGEGGK 308 (389)
T ss_pred CCC-eEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCCCcHH-HHHHHHHcCCCCCCchHH
Confidence 665 589999998877654332 2 234566789999999999999999999999999975 6666666642211
Q ss_pred ---C-----CCcccccccccc--cCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEE
Q 010896 410 ---D-----TSEMKMNGTKSM--IGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAIS 479 (498)
Q Consensus 410 ---~-----~~~~~v~s~K~~--~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv 479 (498)
+ ...+|++...+. .||+.+|+|+..++.+++||+.+.- ...+|..+.+++++
T Consensus 309 ~~~~g~~~~~g~~pvN~~GG~l~~Ghp~~a~G~~~~~e~~~qL~g~a~------------------~g~rqv~~a~~~l~ 370 (389)
T PRK06064 309 LAREGQTYIGGDIPVNPSGGLKAKGHPVGATGVSQAVEIVWQLRGEAE------------------KGRQQVIGAGYGLT 370 (389)
T ss_pred HHHCCCccCCCCeeecCCCCcccCCCCcchhHHHHHHHHHHHHhCCCC------------------CCCccCCCccEEEE
Confidence 0 123456655554 7999999999999999999998420 01223345688999
Q ss_pred Eccc-cccceeeEEEeeC
Q 010896 480 NSFG-FGGHNSVVVFAPF 496 (498)
Q Consensus 480 ~s~G-~gG~n~~~vl~~~ 496 (498)
+++| .+.+++.+||++.
T Consensus 371 ~~~g~~~~~~~~~vl~~~ 388 (389)
T PRK06064 371 HNVGGTGHTAVVHILSRK 388 (389)
T ss_pred ecCCCccceEEEEEEEec
Confidence 9987 3456677777753
|
|
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.8e-24 Score=221.68 Aligned_cols=269 Identities=18% Similarity=0.273 Sum_probs=195.9
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.+++++||+|+|+ +++++| .|++|+..... .....+..++..+
T Consensus 27 ~eLa~~A~~~AL~~agl---~~~dID----~vv~g~~~~~~--------------------------~~~~~a~~va~~~ 73 (404)
T PRK06205 27 EELAATVIRALVERTGI---DPARID----DVIFGQGYPNG--------------------------EAPAIGRVAALDA 73 (404)
T ss_pred HHHHHHHHHHHHHHcCC---CHHHCC----EEEEEeccCCC--------------------------CCChHHHHHHHHc
Confidence 47999999999999999 445566 68888643211 1112344677788
Q ss_pred cCC--CCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchh----------------hHHH-----------
Q 010896 237 GLM--GPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPT----------------GVGG----------- 287 (498)
Q Consensus 237 gl~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~----------------~~~~----------- 287 (498)
|+. -|.++|+.+|+|++.||+.|+++|++|.+|++||+|+|.+.... .+..
T Consensus 74 Gl~~~~p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (404)
T PRK06205 74 GLPVTVPGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGR 153 (404)
T ss_pred CCCCCCceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEeeehhhccCcccccccccccccCcchhhhhhccCccccccc
Confidence 886 37899999999999999999999999999999999998642100 0000
Q ss_pred -Hh---hcc-----c----------------cccCC------------------------C----CCCCCC---------
Q 010896 288 -FI---ACR-----A----------------LSQRN------------------------E----YPKRAS--------- 305 (498)
Q Consensus 288 -~~---~~~-----~----------------ls~~~------------------------~----~p~~~~--------- 305 (498)
+. .++ . .+..+ . +|+...
T Consensus 154 ~~~~~~~m~~~a~~~~~~~gitre~~~~~Av~sh~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~ 233 (404)
T PRK06205 154 RFPVPGGMIETAENLRREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDPTVVDRDEHPRADTTLESL 233 (404)
T ss_pred ccCCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeEecCCCCCceEeccCCCCCCCCCHHHH
Confidence 00 000 0 00000 0 122211
Q ss_pred ---CcCC---------CCCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHH
Q 010896 306 ---RPWD---------KDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSL 373 (498)
Q Consensus 306 ---rpfd---------~~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al 373 (498)
+|.. ...+...++|||+++||++++.|++.+.+++++|.|++...+.. ...+.+...+++++|
T Consensus 234 ~~~~~v~~~~~p~g~lt~~~~~~~~DGAaa~vl~se~~A~~~~~~p~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al 308 (404)
T PRK06205 234 AKLRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEP-----SRMGIGPVPATEKAL 308 (404)
T ss_pred hcCCCcCccCCCCCceeCcccCCCCCceeEEEEecHHHHHHCCCCceEEEEEEEEeccCC-----ccccccHHHHHHHHH
Confidence 1221 11233446899999999999999999999999999999876422 223345678999999
Q ss_pred HHcCCCCCCcCEEEccCCCCccCcHHHHHHHH--HHhc--C--CCcccccccccccCCcchhhhHHHHHHHHHHhhcCcc
Q 010896 374 EDAGVSPEEVNYVNAHATSTLAGDLAEVNAIK--KVFK--D--TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWL 447 (498)
Q Consensus 374 ~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~--~~f~--~--~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~i 447 (498)
++|||+++|||++|.| |.++...+. +.|+ . ..++++++.+..+||+.||+|+..++.++.+|+..
T Consensus 309 ~~Agl~~~Did~~ei~-------d~f~~~~l~~~e~lg~~~~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~-- 379 (404)
T PRK06205 309 ARAGLTLDDIDLIELN-------EAFAAQVLAVLKEWGFGADDEERLNVNGSGISLGHPVGATGGRILATLLRELQRR-- 379 (404)
T ss_pred HHcCCCHHHCCEeeec-------cHHHHHHHHHHHHhCcCcccCCCcCCCCCHHhhCCChhhhHHHHHHHHHHHHHhc--
Confidence 9999999999999999 777665544 3343 1 13689999999999999999999999999999762
Q ss_pred CCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEeeCC
Q 010896 448 HPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPFS 497 (498)
Q Consensus 448 pp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~~ 497 (498)
+.++.+++.+.-||.-.++||++++
T Consensus 380 -------------------------~~~~gl~~~c~~gg~g~a~~~e~~~ 404 (404)
T PRK06205 380 -------------------------QARYGLETMCIGGGQGLAAVFERVN 404 (404)
T ss_pred -------------------------CCCeEEEEEeccCChhhEEEEEecC
Confidence 3478999999999999999999864
|
|
| >PLN02287 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-23 Score=218.47 Aligned_cols=272 Identities=18% Similarity=0.255 Sum_probs=193.3
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.+++++||+|+|+ +++++| +|++|+...... .....+..++..+
T Consensus 72 ~eLa~eA~~~AL~dAgl---~~~dID----~vv~G~~~~~~~-------------------------~~~~~~r~~a~~~ 119 (452)
T PLN02287 72 DDLLAPVLKAVVEKTGL---NPSEVG----DIVVGTVLAPGS-------------------------QRANECRMAAFYA 119 (452)
T ss_pred HHHHHHHHHHHHHHcCC---CHHHCC----EEEEEeecCccc-------------------------ccchHHHHHHHHC
Confidence 47999999999999999 445666 578876422110 0011223455667
Q ss_pred cCCC--CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchh-h--------H------------HHHh----
Q 010896 237 GLMG--PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPT-G--------V------------GGFI---- 289 (498)
Q Consensus 237 gl~G--p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~-~--------~------------~~~~---- 289 (498)
|+.. |.++|+.+|+|++.|+..|++.|++|.+|++||+|+|.+.... . + ++..
T Consensus 120 Gl~~~~pa~~V~~~CaSG~~Ai~~Aa~~I~sG~~dvvLv~GvE~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~y 199 (452)
T PLN02287 120 GFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGVESMTTNPMAWEGGVNPRVESFSQAQDCLLPMGITSENV 199 (452)
T ss_pred CCCCCcceEEEeccCchHHHHHHHHHHHHHcCCCCeEEEEeEEecCCCchhhccccCchhhccccccccCcCHHHHHHHH
Confidence 8864 8899999999999999999999999999999999999742210 0 0 0000
Q ss_pred --hccc----------cccC--CCCCCC-------------------------------------------CCCc-CCC-
Q 010896 290 --ACRA----------LSQR--NEYPKR-------------------------------------------ASRP-WDK- 310 (498)
Q Consensus 290 --~~~~----------ls~~--~~~p~~-------------------------------------------~~rp-fd~- 310 (498)
+.+. .+.+ ...|.. ..+| |+.
T Consensus 200 ~~~yGitrE~la~vAvksh~nAa~np~ag~f~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~~~e~l~~l~~v~~~~ 279 (452)
T PLN02287 200 AERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKN 279 (452)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeeeeccccccccCCccceeecccCCCCCCCCHHHHhcCCCccCCC
Confidence 0000 0000 000000 0011 110
Q ss_pred ----CCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEE
Q 010896 311 ----DRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYV 386 (498)
Q Consensus 311 ----~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i 386 (498)
..+...++|||+++||++++.|++++.+|++++.+++... ..|...+.+...+++++|+++||+++|||++
T Consensus 280 g~lt~~~~s~~sDGAaalvl~see~A~~~~~~~~a~~~~~~~~~-----~~~~~~~~~~~~A~~~al~~Agl~~~DID~~ 354 (452)
T PLN02287 280 GTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVFRSFAAVG-----VDPAVMGIGPAVAIPAAVKAAGLELDDIDLF 354 (452)
T ss_pred CCEeccccCCcCCceEEEEEeeHHHHHHCCCCeEEEEEEEeecc-----CCCccchHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 0244457999999999999999999999999999987542 2344556667899999999999999999999
Q ss_pred EccCCCCccCcHHHHHHHH--HHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcC
Q 010896 387 NAHATSTLAGDLAEVNAIK--KVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTID 463 (498)
Q Consensus 387 ~~hgtgt~~~D~~E~~al~--~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~ 463 (498)
|.| |.+....+. +.|+- ..++++++.+..+||+.||+|+..++.++++|+..-
T Consensus 355 Ei~-------daFa~~~l~~~e~lG~~~~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL~~~~----------------- 410 (452)
T PLN02287 355 EIN-------EAFASQFVYCCKKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRRG----------------- 410 (452)
T ss_pred Eec-------chHHHHHHHHHHHcCCCccccCCCCcHHhccCcHHHHHHHHHHHHHHHHHhcC-----------------
Confidence 999 666555543 23442 357899999999999999999999999999997510
Q ss_pred cCCCcccccCccEEEEEccccccceeeEEEeeCC
Q 010896 464 TVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPFS 497 (498)
Q Consensus 464 ~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~~ 497 (498)
...++++.+.+.-||.-.++||++.+
T Consensus 411 --------~~~~~gl~~~c~ggG~g~a~~ie~~~ 436 (452)
T PLN02287 411 --------KDCRFGVVSMCIGTGMGAAAVFERGD 436 (452)
T ss_pred --------CCCCeeEEEEccccCceeEEEEEecC
Confidence 01267888999999999999999864
|
|
| >TIGR02430 pcaF beta-ketoadipyl CoA thiolase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.7e-24 Score=219.31 Aligned_cols=269 Identities=20% Similarity=0.263 Sum_probs=193.7
Q ss_pred HHHHHHHHHHHHH-HCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 157 WRYCLVAGRRALE-EASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 157 ~~l~l~aa~~AL~-dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
..|+.++.+++|+ ++|++ ++.+| .|++|..... +......+..++..
T Consensus 26 ~~L~~~a~~~al~~~a~i~---~~~Id----~v~~G~~~~~-------------------------~~~~~~~ar~~~~~ 73 (400)
T TIGR02430 26 DDLAAVPIKALLARNPQLD---WAAID----DVIYGCANQA-------------------------GEDNRNVARMAALL 73 (400)
T ss_pred HHHHHHHHHHHHHhccCCC---HHHCC----EEEEEecccc-------------------------ccccccHHHHHHHH
Confidence 3789999999999 68994 45566 5888863210 00011234457778
Q ss_pred hcCC--CCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hhh----------H-----------------
Q 010896 236 TGLM--GPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PTG----------V----------------- 285 (498)
Q Consensus 236 lgl~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~~----------~----------------- 285 (498)
+|+. =|.++|+++|+||+.|+..|++.|++|++|++||||+|.+.. |.. .
T Consensus 74 ~Gl~~~~p~~~V~~~CaSG~~Ai~~a~~~I~sG~~d~~la~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (400)
T TIGR02430 74 AGLPVSVPGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSRAPFVMGKADSAFSRSAKIEDTTIGWRFINPLM 153 (400)
T ss_pred cCCCCCCceEEeechhhhHHHHHHHHHHHHHCCCCCEEEEeccccccCCcccccccccccccccccccccccccccCccc
Confidence 8886 389999999999999999999999999999999999998632 210 0
Q ss_pred -HHHh-------------hcc-------c------------------------cc---cCC----CCCCCCCC-------
Q 010896 286 -GGFI-------------ACR-------A------------------------LS---QRN----EYPKRASR------- 306 (498)
Q Consensus 286 -~~~~-------------~~~-------~------------------------ls---~~~----~~p~~~~r------- 306 (498)
..|. +.+ . ++ ..+ ..|+...|
T Consensus 154 ~~~~~~~~M~~~ae~~a~~ygisre~~d~~A~~Sh~~a~~a~~~g~~~~ei~pv~vk~~~~~~~~~n~da~~r~~~t~e~ 233 (400)
T TIGR02430 154 KALYGVDSMPETAENVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEPTVVDQDEHPRPETTLEG 233 (400)
T ss_pred ccccccCcHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeccCCCCceeeCCCCccCCCCCHHH
Confidence 0010 000 0 00 001 12222222
Q ss_pred -----c-CCC-----CCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHH
Q 010896 307 -----P-WDK-----DRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLED 375 (498)
Q Consensus 307 -----p-fd~-----~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~ 375 (498)
| |+. ..+...++||++++||++++.|+++|.+++++|+|++.... .|.+.+.+...+++++|++
T Consensus 234 l~~~~~v~~p~g~lt~~~~s~~~DGAaa~vl~s~e~A~~~g~~~~~~I~g~~~~~~-----~~~~~~~~~~~a~~~al~~ 308 (400)
T TIGR02430 234 LAKLKPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGV-----EPRIMGIGPVPATQKLLAR 308 (400)
T ss_pred HhcCCCcccCCCCEeccccCCcCCceEEEEEecHHHHHHCCCCccEEEEEEEEecC-----CCccccchHHHHHHHHHHH
Confidence 1 221 12334478999999999999999999999999999987753 2334455678899999999
Q ss_pred cCCCCCCcCEEEccCCCCccCcHHHHHHH--HHHhcC-CCccccccccc--ccCCcchhhhHHHHHHHHHHhhcCccCCC
Q 010896 376 AGVSPEEVNYVNAHATSTLAGDLAEVNAI--KKVFKD-TSEMKMNGTKS--MIGHGLGAAGGLEAITTIKAITTGWLHPT 450 (498)
Q Consensus 376 Agl~~~dId~i~~hgtgt~~~D~~E~~al--~~~f~~-~~~~~v~s~K~--~~Gh~~~AaG~~~li~a~~~L~~g~ipp~ 450 (498)
+||+++||||+|.| |.++...+ .+.|+- ....|++..++ .+||+.||+|+..++.++.+|+..
T Consensus 309 Agl~~~DID~~ei~-------D~f~~~~l~~~e~lG~~~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qLr~~----- 376 (400)
T TIGR02430 309 AGLSIDQFDVIELN-------EAFAAQALAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVLTALRQLERS----- 376 (400)
T ss_pred hCCCHHHCCCcccC-------cHHHHHHHHHHHHcCCCCCCCeECCCCchHhccChHHHHHHHHHHHHHHHHHhc-----
Confidence 99999999999988 88766554 456763 12356777766 589999999999999999999761
Q ss_pred CCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEeeC
Q 010896 451 LNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 451 ~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
+.++.+++.+.-||.-.++||+++
T Consensus 377 ----------------------~~~~g~~~~c~~gG~g~a~~~e~~ 400 (400)
T TIGR02430 377 ----------------------GGRYALCTMCIGVGQGIALAIERV 400 (400)
T ss_pred ----------------------CCCEEEEEEccccChhhEEEEEeC
Confidence 246788888889999999999863
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. |
| >PRK07108 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.3e-24 Score=219.79 Aligned_cols=270 Identities=18% Similarity=0.207 Sum_probs=195.2
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+.+++++||+|+|++ ++++| .|++|+..... . .....+.+++..
T Consensus 27 ~~dL~~~A~~~aL~~agi~---~~~ID----~vi~G~~~~~~----------------------~---~~~~~a~~i~~~ 74 (392)
T PRK07108 27 GATLGGHVVQHAVERAKLD---PAEVE----DVIMGCANPEG----------------------A---TGANIARQIALR 74 (392)
T ss_pred HHHHHHHHHHHHHHHcCCC---HHHCC----cEEEEEeeccc----------------------c---cccHHHHHHHHH
Confidence 3579999999999999994 44565 47888642211 0 011256678888
Q ss_pred hcCC--CCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hhh------------------H--HHH----
Q 010896 236 TGLM--GPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PTG------------------V--GGF---- 288 (498)
Q Consensus 236 lgl~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~~------------------~--~~~---- 288 (498)
+|+. .|+++|+++|+|++.||+.|+++|++|++|++||||+|.+.. |.. + ...
T Consensus 75 lGl~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vlagGvE~ms~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~ 154 (392)
T PRK07108 75 AGLPVTVPGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMNRHMLREGWLVEHKPEIYWSMLQTAEN 154 (392)
T ss_pred cCCCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCCCcCCCcCccchhhhccCCccccCHHHHHHH
Confidence 8885 699999999999999999999999999999999999997532 100 0 000
Q ss_pred ------------hhcccccc-------CCC----------------CCCC--------------C------------CC-
Q 010896 289 ------------IACRALSQ-------RNE----------------YPKR--------------A------------SR- 306 (498)
Q Consensus 289 ------------~~~~~ls~-------~~~----------------~p~~--------------~------------~r- 306 (498)
...+..+. ++. .|.. . .+
T Consensus 155 ~a~~~~i~r~~~d~~a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~~a~~~~~~~~~~~~de~~r~~~t~e~l~~l~~ 234 (392)
T PRK07108 155 VAKRYGISKERQDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSKIRS 234 (392)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCceeeEEecccccccccCcccccceeEccCCCCCCCCCHHHHhcCCC
Confidence 00000000 000 0100 0 11
Q ss_pred cCC----CCCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 010896 307 PWD----KDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEE 382 (498)
Q Consensus 307 pfd----~~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~d 382 (498)
+|. ...+...++||++++||++++.|+++|.+++++|+|++...+ .|++.+.+...+++++|+++||+++|
T Consensus 235 ~~~~g~lt~~n~~~~~DGAaa~vl~s~~~A~~~g~~~~~~i~g~~~~~~-----~~~~~~~~~~~a~~~al~~agl~~~D 309 (392)
T PRK07108 235 ALPGGVITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGC-----EPDEMGIGPVFAVPKLLKQAGLKVDD 309 (392)
T ss_pred CCCCCCCcCCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecc-----CCcccchhHHHHHHHHHHHcCCCHHH
Confidence 120 112334478999999999999999999999999999998753 34555556789999999999999999
Q ss_pred cCEEEccCCCCccCcHHHHHHHH--HHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCC
Q 010896 383 VNYVNAHATSTLAGDLAEVNAIK--KVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPE 459 (498)
Q Consensus 383 Id~i~~hgtgt~~~D~~E~~al~--~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~ 459 (498)
||++|.| |.+-...+. +.++- ..++++++.+..+||+.||+|+.-++.++..|+..
T Consensus 310 id~~ei~-------eafa~~~l~~~e~lg~~~~~vN~~GG~~a~GHp~gatG~r~~~~l~~~l~~~-------------- 368 (392)
T PRK07108 310 IDLWELN-------EAFAVQVLYCRDTLGIPMDRLNVNGGAIAVGHPYGVSGARLTGHALIEGKRR-------------- 368 (392)
T ss_pred cCchHhh-------hHHHHHHHHHHHhcCCCccccCCCCChHHhCcchhhhHHHHHHHHHHHHHhh--------------
Confidence 9999988 444333222 22332 35789999999999999999999999999999651
Q ss_pred CCcCcCCCcccccCccEEEEEccccccceeeEEEeeC
Q 010896 460 VTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 460 ~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
+.++.+++.++-||.-.++||++.
T Consensus 369 -------------~~~~g~~~~c~~gg~g~a~~ie~~ 392 (392)
T PRK07108 369 -------------GAKYVVVTMCIGGGQGAAGLFEVL 392 (392)
T ss_pred -------------CCCEEEEEEccccChhhEEEEEeC
Confidence 236789999999999999999863
|
|
| >PRK07851 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=9e-24 Score=217.68 Aligned_cols=269 Identities=19% Similarity=0.271 Sum_probs=194.3
Q ss_pred HHHHHHHHHHHHHHC-CCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 157 WRYCLVAGRRALEEA-SLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 157 ~~l~l~aa~~AL~dA-G~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
..|+.+++++||+|+ |+ +++++| ++++|..... .... ...+..++..
T Consensus 28 ~eL~~~A~~~AL~da~gl---~~~dID----~vv~g~~~~~----------------------~~~g---~~~~~~~a~~ 75 (406)
T PRK07851 28 DDLAAQMVRAALDKVPAL---DPTDID----DLMLGCGLPG----------------------GEQG---FNMARVVAVL 75 (406)
T ss_pred HHHHHHHHHHHHHhccCC---CHHHCC----EEEEEccccc----------------------cccc---CCHHHHHHHH
Confidence 479999999999997 99 445666 6777742100 0000 1234568888
Q ss_pred hcCCC-CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hh------------hHH---------------
Q 010896 236 TGLMG-PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PT------------GVG--------------- 286 (498)
Q Consensus 236 lgl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~------------~~~--------------- 286 (498)
+|+.+ |+++|+++|+|++.|+..|+++|++|++|++||+|+|.+-. |. .+.
T Consensus 76 lGl~~~p~~~v~~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (406)
T PRK07851 76 LGYDFLPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPLFAEAQARTAARAEGGAE 155 (406)
T ss_pred cCCCCCCeeeeeccchhHHHHHHHHHHHHHCCCCCEEEEeeEEecccCcccccccccccCchhhhhcccccccccccccc
Confidence 99976 88999999999999999999999999999999999885211 00 000
Q ss_pred -------------HHhhcc---------------------cc---------ccC-CC---C----C-------CCCC---
Q 010896 287 -------------GFIACR---------------------AL---------SQR-NE---Y----P-------KRAS--- 305 (498)
Q Consensus 287 -------------~~~~~~---------------------~l---------s~~-~~---~----p-------~~~~--- 305 (498)
.+..++ .. ... .. . | +...
T Consensus 156 ~~~~~~g~~~~~~~~~amg~~a~~~~~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~~~p~~~p~~~~~~~d~~~r~~ 235 (406)
T PRK07851 156 AWHDPREDGLLPDVYIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPDGTVVSTDDGPRAG 235 (406)
T ss_pred cccccccccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccceeeeecCCCceeCCCCCccCC
Confidence 000000 00 000 00 0 0 0001
Q ss_pred ---------CcC-CC-----CCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHH
Q 010896 306 ---------RPW-DK-----DRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIA 370 (498)
Q Consensus 306 ---------rpf-d~-----~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~ 370 (498)
+|. +. ..|...++||++++||++++.|++++.+++++|+|++...+ .|.+...+...+++
T Consensus 236 ~t~e~v~~s~~v~~P~~~lt~~d~~~~~DGaaa~vl~s~e~A~~~~~~~~a~I~g~~~~~~-----~~~~~~~~~~~a~~ 310 (406)
T PRK07851 236 TTYEKVSQLKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIVSTGVSGL-----SPEIMGLGPVEASK 310 (406)
T ss_pred cCHHHHhcCCCccCCCCcEecCcCCccCCceeEEEEccHHHHHHcCCCccEEEEEEEEccC-----CCCccchhHHHHHH
Confidence 111 11 12444579999999999999999999999999999987643 22334445678999
Q ss_pred HHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHH--HHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCcc
Q 010896 371 KSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIK--KVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWL 447 (498)
Q Consensus 371 ~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~--~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~i 447 (498)
+||++|||+++||||+|.| |.+....+. +.|+- ..++++++.+..+||+.|++|+.+++.++++|+..
T Consensus 311 ~al~~Agi~~~did~~ei~-------d~f~~~~l~~le~lg~~~~pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL~~~-- 381 (406)
T PRK07851 311 QALARAGMSIDDIDLVEIN-------EAFAAQVLPSARELGIDEDKLNVSGGAIALGHPFGMTGARITTTLLNNLQTH-- 381 (406)
T ss_pred HHHHHhCCCHHHCCeehhh-------hHHHHHHHHHHHHhCCCccccCCCCChHhhcCcHHHHHHHHHHHHHHHHHhc--
Confidence 9999999999999999999 776666554 34442 24789999999999999999999999999999651
Q ss_pred CCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEeeC
Q 010896 448 HPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 448 pp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
+.++.+++.++-||...++||+++
T Consensus 382 -------------------------~~~~g~~~~~~~gg~g~a~~~e~~ 405 (406)
T PRK07851 382 -------------------------DKTFGLETMCVGGGQGMAMVLERL 405 (406)
T ss_pred -------------------------CCCeEEEEEccccChhhEEEEEec
Confidence 236789999999999999999975
|
|
| >PRK06445 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.7e-24 Score=217.84 Aligned_cols=273 Identities=19% Similarity=0.244 Sum_probs=191.3
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.+++++||+|+|+ +++++| .|++|+....... +. .... ...+...+
T Consensus 33 ~~L~~~a~~~AL~~agl---~~~dID----~vi~g~~~~~~~~---------------------~~-~~~~-~~~l~a~~ 82 (394)
T PRK06445 33 EELAAMLINRLIEKTGI---KPEEID----DIITGCALQVGEN---------------------WL-YGGR-HPIFLARL 82 (394)
T ss_pred HHHHHHHHHHHHHHcCC---CHHHCC----eeEEEeecCCCcc---------------------cc-cHHH-HHHHHcCC
Confidence 47999999999999999 445666 5778764321100 00 0000 11122223
Q ss_pred cCCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hh----------hH----------------HHHh
Q 010896 237 GLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PT----------GV----------------GGFI 289 (498)
Q Consensus 237 gl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~----------~~----------------~~~~ 289 (498)
+.+-|+++|+++|+|++.|++.|+++|++|.+|++||+|+|.+.. |. .. ..+.
T Consensus 83 ~~~~p~~~V~~~CaSg~~ai~~A~~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 162 (394)
T PRK06445 83 PYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYVMGLT 162 (394)
T ss_pred CCCCcchhhhhhhHHHHHHHHHHHHHHHcCCCCEEEEeeecccccCccccCccccCChhhccccccCcccccCCCCHHHH
Confidence 334589999999999999999999999999999999999995321 10 00 0000
Q ss_pred hccccccC-------------------C------------------------CCCCCCCC------------cC-C----
Q 010896 290 ACRALSQR-------------------N------------------------EYPKRASR------------PW-D---- 309 (498)
Q Consensus 290 ~~~~ls~~-------------------~------------------------~~p~~~~r------------pf-d---- 309 (498)
....+..+ . .+|+...| |. +
T Consensus 163 a~~~~~~ygitre~~a~va~~sh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~npda~~r~~~t~e~~~~~~~v~~~~g~ 242 (394)
T PRK06445 163 AEKLAEEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVEVEGKKKVVDVDQSVRPDTSLEKLAKLPPAFKPDGV 242 (394)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeEEEecCCCCceeeCCCCCCCCCCCHHHHhcCCCccCCCCc
Confidence 00000000 0 02222222 11 1
Q ss_pred -CCCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEc
Q 010896 310 -KDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNA 388 (498)
Q Consensus 310 -~~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~ 388 (498)
...+...++|||+++||++++.|++++.+++++|+|++...+ .|...+.+...+++++|+++|++++||||+|.
T Consensus 243 lt~~~~~~~~DGAaavvl~s~~~A~~~~~~~~a~i~g~~~~~~-----~~~~~~~~~~~a~~~al~~Agl~~~dId~~e~ 317 (394)
T PRK06445 243 ITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGV-----PPAIMGKGPVPASKKALEKAGLSVKDIDLWEI 317 (394)
T ss_pred EecCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecc-----CCchhcchHHHHHHHHHHHcCCCHHHcCEEEe
Confidence 012344579999999999999999999999999999998763 23344556788999999999999999999999
Q ss_pred cCCCCccCcHHHHHHHHHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCc
Q 010896 389 HATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNV 468 (498)
Q Consensus 389 hgtgt~~~D~~E~~al~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~ 468 (498)
|...+. .|...++..--...++++++....+||+.||+|+..++.++++|+.
T Consensus 318 ~d~f~~----~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~------------------------ 369 (394)
T PRK06445 318 NEAFAV----VVLYAIKELGLDPETVNIKGGAIAIGHPLGATGARIVGTLARQLQI------------------------ 369 (394)
T ss_pred cccchH----HHHHHHHHhCCCccccCCCCCHHHcCCCccchHHHHHHHHHHHHHh------------------------
Confidence 976543 3444444432133578999999999999999999999999999971
Q ss_pred ccccCccEEEEEccccccceeeEEEee
Q 010896 469 KKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 469 ~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
.+.|+++++..+-||+..++||+.
T Consensus 370 ---~~~~~gl~~~~~~gg~g~a~~~e~ 393 (394)
T PRK06445 370 ---KGKDYGVATLCVGGGQGGAVVLER 393 (394)
T ss_pred ---cCCCEEEEEEcccCChhhEEEEEc
Confidence 134789999999999999999986
|
|
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.1e-24 Score=218.73 Aligned_cols=269 Identities=25% Similarity=0.307 Sum_probs=191.6
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+.+|+++||+|||+ +++++| ++++|+..... .. ...+..++..
T Consensus 21 ~~~La~~A~~~Al~dAgl---~~~dID----~vv~g~~~~~~---------------------~~-----~~~a~~va~~ 67 (386)
T TIGR01930 21 AEDLGAAVIKELLERNPL---DPELID----DVIFGNVLQAG---------------------EQ-----QNIARQAALL 67 (386)
T ss_pred HHHHHHHHHHHHHHHcCC---CHHHCC----EEEEEeccCCC---------------------CC-----ChHHHHHHHH
Confidence 358999999999999999 445566 67777532110 00 1234467778
Q ss_pred hcCC--CCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hhh----------H--------H---HH---
Q 010896 236 TGLM--GPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PTG----------V--------G---GF--- 288 (498)
Q Consensus 236 lgl~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~~----------~--------~---~~--- 288 (498)
+|+. .|.+.|+++|+|++.+|..|+.+|++|.+|.+||+|+|.+.. +.. . . ++
T Consensus 68 lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 147 (386)
T TIGR01930 68 AGLPESVPAYTVNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSLPRSRREGVDPGRFELEDQILKDGLTDP 147 (386)
T ss_pred cCCCCCceeeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCccccccccccccccCccccchhhcCcccccc
Confidence 8886 389999999999999999999999999999999999886311 100 0 0 00
Q ss_pred --------hhccccccCCC--------------------C---------CC--------------C------------CC
Q 010896 289 --------IACRALSQRNE--------------------Y---------PK--------------R------------AS 305 (498)
Q Consensus 289 --------~~~~~ls~~~~--------------------~---------p~--------------~------------~~ 305 (498)
...+.+..++. . |. . .+
T Consensus 148 ~~~~~~a~~a~~y~~~yG~t~e~la~vav~~~~~A~~n~~~g~~~~~i~P~a~~~~~~~~~~~~da~~r~~~t~e~v~~s 227 (386)
T TIGR01930 148 LNGLSMGLTAENLAKKYGISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGRKGPVTVSTDEGIRPNTTLEKLAKL 227 (386)
T ss_pred ccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCC
Confidence 00000000000 0 10 0 00
Q ss_pred CcC-C-----CCCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCC
Q 010896 306 RPW-D-----KDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVS 379 (498)
Q Consensus 306 rpf-d-----~~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~ 379 (498)
+|. + ...|...++||++++||++++.|++++.+++++|+|++...+ .|.+......++++++|++|||+
T Consensus 228 ~~i~~P~~~l~~~d~~~~~dGAaa~vl~s~~~A~~~~~~~~~~i~g~g~~~~-----~~~~~~~~~~~a~~~a~~~Agi~ 302 (386)
T TIGR01930 228 KPAFDPNGTVTAGNSSPLNDGAAALLLMSEERAKELGLTPLARIVSFAVAGV-----DPEIMGLGPVPAIPKALKKAGLS 302 (386)
T ss_pred CCCcCCCCeeeCCccCCCCcceeEEEEecHHHHHHCCCCccEEEEEEEEecC-----CCccccccHHHHHHHHHHHcCCC
Confidence 111 0 012344468999999999999999999999999999988753 23333445578999999999999
Q ss_pred CCCcCEEEccCCCCccCcHHHHHHHHHHhc-CCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCC
Q 010896 380 PEEVNYVNAHATSTLAGDLAEVNAIKKVFK-DTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEP 458 (498)
Q Consensus 380 ~~dId~i~~hgtgt~~~D~~E~~al~~~f~-~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~ 458 (498)
|+|||++|.|.+.+. +.....+.|+ +..++++++.+..+||+.+|+|+.+++.+++||+..
T Consensus 303 ~~did~~e~~d~fa~-----~~~~~~e~lG~~~~pvn~~GG~l~~Ghp~gasG~~~~~e~~~qL~g~------------- 364 (386)
T TIGR01930 303 ISDIDLFEINEAFAA-----QVLACIKELGLDLEKVNVNGGAIALGHPLGASGARIVTTLLHELKRR------------- 364 (386)
T ss_pred HHHCCeeehcchhHH-----HHHHHHHHhCCChhhcCCCCChHhhCCcHHHHHHHHHHHHHHHHHhc-------------
Confidence 999999999966542 2222234454 234788999999999999999999999999999873
Q ss_pred CCCcCcCCCcccccCccEEEEEccccccceeeEEEe
Q 010896 459 EVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494 (498)
Q Consensus 459 ~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~ 494 (498)
+.++++++.++.||...++|||
T Consensus 365 --------------~~~~gl~~~~~~gG~g~~~~~e 386 (386)
T TIGR01930 365 --------------GGRYGLATICIGGGQGIAVILE 386 (386)
T ss_pred --------------CCCEEEEEEeccCCceEEEEeC
Confidence 3478999999999999999886
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >PRK08131 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-23 Score=215.63 Aligned_cols=269 Identities=21% Similarity=0.260 Sum_probs=185.4
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.++.++||+|+|+ +++++| .|++|+...... . -.| .+..++...
T Consensus 27 ~eL~~~a~~~al~~agi---~~~~Id----~v~~G~~~~~~~----------------------~--~~~-~ar~~~~~~ 74 (401)
T PRK08131 27 DDLAATVIRRLLEKSGF---PGDDIE----DVILGCTNQAGE----------------------D--SRN-VARNALLLA 74 (401)
T ss_pred HHHHHHHHHHHHHHcCC---CHHHCC----EEEEEecccccc----------------------c--ccc-HHHHHHHhc
Confidence 47999999999999999 445566 688886421110 0 012 233456667
Q ss_pred cCC--CCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhh---------------HHH------------
Q 010896 237 GLM--GPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTG---------------VGG------------ 287 (498)
Q Consensus 237 gl~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~---------------~~~------------ 287 (498)
|+. -|.++|+++|+||+.|+..|++.|++|++|++||||+|.+..... +..
T Consensus 75 Glp~~~p~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvlagG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (401)
T PRK08131 75 GLPVTVPGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVMGKAESAFSRDAKVFDTTIGARFPNPKIV 154 (401)
T ss_pred CCCCCCceeeeechhhhHHHHHHHHHHHHHCCCCCEEEEEEecCCCCCcccccccccccccCcchhhhhhcccccCcccc
Confidence 775 489999999999999999999999999999999999997532100 000
Q ss_pred --Hhh-------------ccc-------cc---cC-----CCCC--CCCCCcCCC-------------------------
Q 010896 288 --FIA-------------CRA-------LS---QR-----NEYP--KRASRPWDK------------------------- 310 (498)
Q Consensus 288 --~~~-------------~~~-------ls---~~-----~~~p--~~~~rpfd~------------------------- 310 (498)
|.. .+. ++ .. ...+ .....|.+.
T Consensus 155 ~~~a~~~mg~~ae~~~~~ygitre~~d~vA~~S~~~~~~a~~~~~~~~~i~pi~v~~~~~~~~~~v~~De~~r~~~~~e~ 234 (401)
T PRK08131 155 AQYGNDSMPETGDNVAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRPSSTVEA 234 (401)
T ss_pred cccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCceeeEEeccccCCCceEEecCCCCCCCCCHHH
Confidence 000 000 00 00 0000 000001110
Q ss_pred --------------CCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHc
Q 010896 311 --------------DRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDA 376 (498)
Q Consensus 311 --------------~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~A 376 (498)
..+...++|||+++||++++.|++++.+++++|.|++...+ .|...+.+...+++++|+++
T Consensus 235 L~~l~p~f~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~-----~~~~~~~~~~~a~~~a~~~a 309 (401)
T PRK08131 235 LTKLKPLFEGGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGV-----EPRIMGIGPVEAIKKALARA 309 (401)
T ss_pred HhcCCCCCCCCCccCCcCCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecc-----CCccccchHHHHHHHHHHHc
Confidence 01445578999999999999999999999999999998864 23333456688999999999
Q ss_pred CCCCCCcCEEEccCCCCccCcHHHHHHHH--HHhcC---CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCC
Q 010896 377 GVSPEEVNYVNAHATSTLAGDLAEVNAIK--KVFKD---TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTL 451 (498)
Q Consensus 377 gl~~~dId~i~~hgtgt~~~D~~E~~al~--~~f~~---~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~ 451 (498)
||+++|||++|.| |.+....|. +.++- ..+++.++....+||+.||+|+..++.++++|+..
T Consensus 310 gl~~~did~~ei~-------d~Fa~~~l~~~e~lg~~~~~~~vN~~GG~la~GhP~gAtG~~~~~el~~qL~~~------ 376 (401)
T PRK08131 310 GLTLDDMDIIEIN-------EAFASQVLGCLKGLGVDFDDPRVNPNGGAIAVGHPLGASGARLALTAARELQRR------ 376 (401)
T ss_pred CCCHHHCCeehhc-------cHHHHHHHHHHHHcCCCCCCCCccCCccHHhcCCchhhhHHHHHHHHHHHHHhc------
Confidence 9999999999999 666555544 33431 23455555555789999999999999999999862
Q ss_pred CCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEeeC
Q 010896 452 NQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 452 ~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
..++.++....-||+..++||++.
T Consensus 377 ---------------------~~~~~~~~~~~ggg~g~a~i~e~~ 400 (401)
T PRK08131 377 ---------------------GKRYAVVSLCIGVGQGLAMVIERV 400 (401)
T ss_pred ---------------------CCCceEEEEEecCChhhEEEEEec
Confidence 113455566667788889999874
|
|
| >PRK06954 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-23 Score=216.36 Aligned_cols=269 Identities=21% Similarity=0.239 Sum_probs=183.8
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.+++++||+|+|++ ++++| .|++|+...... ..+ .+...+..+
T Consensus 32 ~eL~~~a~~~aL~~Agi~---~~dID----~vi~G~~~~~~~-------------------------~~~-~~~~~~l~a 78 (397)
T PRK06954 32 PQLGAAAIAAAVERAGLK---PEQID----EVVMGCVLPAGQ-------------------------GQA-PARQAALGA 78 (397)
T ss_pred HHHHHHHHHHHHHHcCCC---HHHcC----EEEEEecCCCcc-------------------------chH-HHHHHHHcC
Confidence 479999999999999994 45566 588886421100 011 122222334
Q ss_pred cCC--CCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hhh---------------HHHH--hhc-cccc
Q 010896 237 GLM--GPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PTG---------------VGGF--IAC-RALS 295 (498)
Q Consensus 237 gl~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~~---------------~~~~--~~~-~~ls 295 (498)
|+. -|+++|+.+|+|++.|+..|+++|++|++|++||+|+|.+.. |.. ...+ ... ..+.
T Consensus 79 g~~~~~p~~~V~~aCaSG~~Av~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 158 (397)
T PRK06954 79 GLPLSVGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYD 158 (397)
T ss_pred CCCCCccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEeeeccCCCcccCcccccccccCcchhhhhhcccccccccc
Confidence 442 477999999999999999999999999999999999997531 210 0000 000 0000
Q ss_pred --------------cCCC-------------------CCCCCC----CcCC-----------------------------
Q 010896 296 --------------QRNE-------------------YPKRAS----RPWD----------------------------- 309 (498)
Q Consensus 296 --------------~~~~-------------------~p~~~~----rpfd----------------------------- 309 (498)
.++. .|.+.. .|++
T Consensus 159 ~~~~~~~~a~~~~~~ygitre~~d~~A~~s~~~a~~a~~~~~~~~~~~pv~v~~~~~~~~v~~D~~pr~~~~~~l~~l~~ 238 (397)
T PRK06954 159 KGRLMGTFAEECAGEYGFTREAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGKKGDTVIDRDEQPFKANPEKIPTLKP 238 (397)
T ss_pred cCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEEeccCCCCeEeccCCCcCCCCHHHHhCCCC
Confidence 0000 011000 1111
Q ss_pred ---C-----CCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 010896 310 ---K-----DRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPE 381 (498)
Q Consensus 310 ---~-----~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~ 381 (498)
. ..+...++|||+++||++++.|+++|.+++++|.|++...+. |.....+...+++++|+++||+++
T Consensus 239 ~f~~~g~lt~~~~~~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~ 313 (397)
T PRK06954 239 AFSKTGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQA-----PSKFTTAPVGAIRKLFEKNGWRAA 313 (397)
T ss_pred ccCCCCcEEccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccC-----cccccchHHHHHHHHHHHcCCCHH
Confidence 0 011234689999999999999999999999999998765321 222233557899999999999999
Q ss_pred CcCEEEccCCCCccCcHHHHHHHHHHhc-CCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCC
Q 010896 382 EVNYVNAHATSTLAGDLAEVNAIKKVFK-DTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEV 460 (498)
Q Consensus 382 dId~i~~hgtgt~~~D~~E~~al~~~f~-~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~ 460 (498)
|||++|.|...+. .|...++. ++ ...++++++.+..+||+.||+|+..++.++++|+..
T Consensus 314 Did~~ei~d~fa~----~~l~~~e~-lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL~~~--------------- 373 (397)
T PRK06954 314 EVDLFEINEAFAV----VTMAAMKE-HGLPHEKVNVNGGACALGHPIGASGARILVTLIGALRAR--------------- 373 (397)
T ss_pred HCCEEehhhHHHH----HHHHHHHH-hCCCcccCCcCCChHHhcccHHHHHHHHHHHHHHHHHhc---------------
Confidence 9999999943322 13333333 33 235789999999999999999999999999999762
Q ss_pred CcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 461 TIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 461 ~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
..++.+++.++-||...++||++
T Consensus 374 ------------~g~~~v~~~c~~gg~g~a~~~e~ 396 (397)
T PRK06954 374 ------------GGKRGVASLCIGGGEATAMGIEL 396 (397)
T ss_pred ------------CCCeEEEEEccccchhhEEEEEe
Confidence 12567888889999999999986
|
|
| >PRK08235 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-23 Score=215.19 Aligned_cols=267 Identities=22% Similarity=0.292 Sum_probs=189.7
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.+++++||+|+|+ +++++| .|++|+..... .+. .++..++..+
T Consensus 27 ~eLa~~A~~~aL~~agl---~~~dID----~vi~g~~~~~~-----------------------~~~---~~~~~~~~~~ 73 (393)
T PRK08235 27 TELGGIAIKEALERANV---SAEDVE----EVIMGTVLQGG-----------------------QGQ---IPSRQAARAA 73 (393)
T ss_pred HHHHHHHHHHHHHHcCC---CHHHCC----EEEEEecccCC-----------------------CCC---CHHHHHHHHc
Confidence 47999999999999999 445566 68888642210 001 1223456778
Q ss_pred cCC--CCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hhh--------------H------HH----Hh
Q 010896 237 GLM--GPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PTG--------------V------GG----FI 289 (498)
Q Consensus 237 gl~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~~--------------~------~~----~~ 289 (498)
|+. -|.++|+++|+|++.||+.|+++|++|++|.+||+|+|.+.. |.. . .. +.
T Consensus 74 Gl~~~~p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLvvG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (393)
T PRK08235 74 GIPWEVQTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFS 153 (393)
T ss_pred CCCCCcceeehhhhhhHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccccccccCCchhhhhhcccccccccC
Confidence 884 389999999999999999999999999999999999997532 100 0 00 00
Q ss_pred --hcc-----c----------------cccC----C------------------------CCCCCCCC------------
Q 010896 290 --ACR-----A----------------LSQR----N------------------------EYPKRASR------------ 306 (498)
Q Consensus 290 --~~~-----~----------------ls~~----~------------------------~~p~~~~r------------ 306 (498)
.++ . .+.. + -+|+...|
T Consensus 154 ~~~~~~~A~~~~~~ygitre~~d~~avksh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~ 233 (393)
T PRK08235 154 GVHMGVYGGEVAKELGISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQRKGDPIVVAKDEAPRKDTTIEKLAKLK 233 (393)
T ss_pred CCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeeEecCCCCCceEeCCCCCCCCCCCHHHHhcCC
Confidence 000 0 0000 0 01222222
Q ss_pred cC-CC-----CCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCC
Q 010896 307 PW-DK-----DRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSP 380 (498)
Q Consensus 307 pf-d~-----~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~ 380 (498)
|. +. ..+...++|||+++||++++.|++.+.+++++|.|++...+... ........+++++|+++||++
T Consensus 234 ~v~~p~g~lt~~~~~~~~DGAaa~vl~s~~~A~~~~~~p~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~agl~~ 308 (393)
T PRK08235 234 PVFDKTGTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAK-----DFPRTPGYAINALLEKTGKTV 308 (393)
T ss_pred CcccCCCcEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccChh-----hhcchHHHHHHHHHHHhCCCH
Confidence 11 11 12334469999999999999999999999999999876543211 112234579999999999999
Q ss_pred CCcCEEEccCCCCccCcHHHHHHHH--HHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCC
Q 010896 381 EEVNYVNAHATSTLAGDLAEVNAIK--KVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLE 457 (498)
Q Consensus 381 ~dId~i~~hgtgt~~~D~~E~~al~--~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~ 457 (498)
+|||++|.| |.++...+. +.|+- ..++++++.+..+||+.||+|+..++.++++|+..
T Consensus 309 ~did~~e~~-------d~f~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL~~~------------ 369 (393)
T PRK08235 309 EDIDLFEIN-------EAFAAVALASTEIAGIDPEKVNVNGGAVALGHPIGASGARIIVTLIHELKRR------------ 369 (393)
T ss_pred HHCCeehhc-------chhHHHHHHHHHHhCCCcccCCcCCchHHhCCcHHHHHHHHHHHHHHHHHhc------------
Confidence 999999998 776554443 45552 35789999999999999999999999999999762
Q ss_pred CCCCcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 458 PEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 458 ~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
..++.+.+.+.-||.-.++||++
T Consensus 370 ---------------~~~~g~~~~c~~gG~g~a~~~e~ 392 (393)
T PRK08235 370 ---------------GGGIGIAAICSGGGQGDAVLIEV 392 (393)
T ss_pred ---------------CCCeEEEEEcccccceEEEEEEe
Confidence 12457777888899999999986
|
|
| >PRK09050 beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-23 Score=214.74 Aligned_cols=269 Identities=19% Similarity=0.257 Sum_probs=193.2
Q ss_pred HHHHHHHHHHHHH-HCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 157 WRYCLVAGRRALE-EASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 157 ~~l~l~aa~~AL~-dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
..|+.++.+++|+ |+|++ ++.+| .|++|+.... +.....++..++..
T Consensus 27 ~~L~~~a~~~al~~~agi~---~~~Id----~v~~G~~~~~-------------------------~~~~~~~ar~~~~~ 74 (401)
T PRK09050 27 DDLGAVPLKALMARNPGVD---WEAVD----DVIYGCANQA-------------------------GEDNRNVARMSALL 74 (401)
T ss_pred HHHHHHHHHHHHHhccCCC---HHHCC----EEEEEecccc-------------------------ccccchHHHHHHHH
Confidence 4789999999999 68994 44566 5888863210 00011234457778
Q ss_pred hcCC--CCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hhh-------H--------------------
Q 010896 236 TGLM--GPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PTG-------V-------------------- 285 (498)
Q Consensus 236 lgl~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~~-------~-------------------- 285 (498)
.|+. =|.++|+++|+||+.|+..|++.|++|++|++||||+|.+.. |.. +
T Consensus 75 ~Gl~~~vP~~tV~~aCaSG~~Ai~~A~~~I~sG~~dvvlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (401)
T PRK09050 75 AGLPVSVPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMGKADSAFSRQAEIFDTTIGWRFVNPLM 154 (401)
T ss_pred cCCCCCCceEEEecccccHHHHHHHHHHHHHCCCCCEEEEecccccccCcccccchhhhcccCcccccccccccccCCcc
Confidence 8883 399999999999999999999999999999999999997532 210 0
Q ss_pred -HHHh-------------hccc----------cccC-------CC---------------------CCCCCCC-------
Q 010896 286 -GGFI-------------ACRA----------LSQR-------NE---------------------YPKRASR------- 306 (498)
Q Consensus 286 -~~~~-------------~~~~----------ls~~-------~~---------------------~p~~~~r------- 306 (498)
..|. +.+. .|.+ +. .|+...|
T Consensus 155 ~~~~~~~~Mg~~ae~~a~~~gisre~~D~~A~~S~k~a~~A~~ng~~~~ei~p~~~~~~~~~~~~~~~da~~r~~~t~e~ 234 (401)
T PRK09050 155 KAQYGVDSMPETAENVAEDYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDPVVVDRDEHPRPETTLEA 234 (401)
T ss_pred ccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeeccCCCCceeeCCCCCCCCCCCHHH
Confidence 0010 0000 0000 10 1122222
Q ss_pred -----c-CCC-----CCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHH
Q 010896 307 -----P-WDK-----DRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLED 375 (498)
Q Consensus 307 -----p-fd~-----~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~ 375 (498)
| |+. ..+...++|||+++||++++.|+++|.+++++|+|++...+. |...+.+...+++++|++
T Consensus 235 l~~l~~~~~~~g~lt~~n~s~~~DGAaa~vl~s~~~A~~lg~~p~a~I~g~~~~~~~-----~~~~~~~~~~a~~~al~~ 309 (401)
T PRK09050 235 LAKLKPVFRPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMATAGVE-----PRIMGIGPAPATRKLLAR 309 (401)
T ss_pred HhcCCCcccCCCEEeCCCcCCCcCceEEEEEecHHHHHHCCCCccEEEEEEEEeccC-----CccccchHHHHHHHHHHH
Confidence 2 321 123344789999999999999999999999999999887532 333444567899999999
Q ss_pred cCCCCCCcCEEEccCCCCccCcHHHHHHHH--HHhcC-CCcccccccccc--cCCcchhhhHHHHHHHHHHhhcCccCCC
Q 010896 376 AGVSPEEVNYVNAHATSTLAGDLAEVNAIK--KVFKD-TSEMKMNGTKSM--IGHGLGAAGGLEAITTIKAITTGWLHPT 450 (498)
Q Consensus 376 Agl~~~dId~i~~hgtgt~~~D~~E~~al~--~~f~~-~~~~~v~s~K~~--~Gh~~~AaG~~~li~a~~~L~~g~ipp~ 450 (498)
|||+++|||++|.| |.++...+. +.|+- ....+++..++. +||+.||+|+..++.++.+|+..
T Consensus 310 Agl~~~DId~~ei~-------D~f~~~~l~~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qLr~~----- 377 (401)
T PRK09050 310 LGLTIDQFDVIELN-------EAFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQLERT----- 377 (401)
T ss_pred cCCCHHHCCccccC-------cHhHHHHHHHHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHHHhc-----
Confidence 99999999999988 888886654 44552 123567777765 89999999999999999999761
Q ss_pred CCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEeeC
Q 010896 451 LNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 451 ~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
+.++.+++.+.-||.-.++|++++
T Consensus 378 ----------------------~~~~g~~~~c~~gG~g~a~~~e~~ 401 (401)
T PRK09050 378 ----------------------GGRYALCTMCIGVGQGIALAIERV 401 (401)
T ss_pred ----------------------CCCeEEEEEcccccceeEEEEEeC
Confidence 246788999999999999999863
|
|
| >PRK07850 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.8e-23 Score=212.50 Aligned_cols=269 Identities=19% Similarity=0.216 Sum_probs=189.1
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.++++++|+|+|++ ++.+| .|++|...... .....++..++...
T Consensus 27 ~eL~~~a~~~aL~~agi~---~~~Id----~v~~G~~~~~~-------------------------~q~~~~ar~~~l~~ 74 (387)
T PRK07850 27 AELLGAVQRAVLDRAGID---PGDVE----QVIGGCVTQAG-------------------------EQSNNITRTAWLHA 74 (387)
T ss_pred HHHHHHHHHHHHHHcCCC---HHHCC----EEEEEeccccc-------------------------cccchHHHHHHHhC
Confidence 479999999999999994 44566 57888632100 00011233445557
Q ss_pred cCC-C-CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hhhH---------------H----HHh-----
Q 010896 237 GLM-G-PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PTGV---------------G----GFI----- 289 (498)
Q Consensus 237 gl~-G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~~~---------------~----~~~----- 289 (498)
|+. + |.++|+++|+||+.|+..|++.|++|++|++||+|+|.+.. |... . .+.
T Consensus 75 Gl~~~~p~~tV~~~CaSG~~A~~~A~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~ 154 (387)
T PRK07850 75 GLPYHVGATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPLGANAGPGRGLPRPDSWDIDMPNQFEAAERI 154 (387)
T ss_pred CCCCCCceEEEecccccHHHHHHHHHHHHHCCCCCEEEEEeEecCCCCcccccccccccCccccccccCcchHHHHHHHH
Confidence 775 3 89999999999999999999999999999999999998532 2100 0 000
Q ss_pred --hccc----------cccCCC-------------------------CCCCC---------------------CCcCC--
Q 010896 290 --ACRA----------LSQRNE-------------------------YPKRA---------------------SRPWD-- 309 (498)
Q Consensus 290 --~~~~----------ls~~~~-------------------------~p~~~---------------------~rpfd-- 309 (498)
+.+. .|..+. .|... ...|.
T Consensus 155 ~~~ygisre~~d~~a~~sh~~a~~A~~~g~f~~ei~pv~~~~~~~~~np~~~~~~~~~D~~~r~~t~e~l~~l~p~~~~~ 234 (387)
T PRK07850 155 AKRRGITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLRDTTMEGLAGLKPVLEGG 234 (387)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEeecccccccccCCCceEeecCCCcccCCHHHhccCCCCCCCC
Confidence 0000 000000 01111 11221
Q ss_pred --CCCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEE
Q 010896 310 --KDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVN 387 (498)
Q Consensus 310 --~~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~ 387 (498)
...+...++||++++||.+++.|++.+.++.++|+|++..... |.....+...+++++|+++|++++|||++|
T Consensus 235 ~~t~~~~~~~sDGAaa~vl~see~A~~l~~~p~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~did~~e 309 (387)
T PRK07850 235 IHTAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAE-----PYYHLDGPVQATAKVLEKAGMKIGDIDLVE 309 (387)
T ss_pred CccchhcCCcCCceEEEEEecHHHHHHcCCCCcEEEEEEEEeccC-----chhhcchHHHHHHHHHHHcCCCHHHcCeee
Confidence 1114445789999999999999999998888999999875421 222234557899999999999999999999
Q ss_pred ccCCCCccCcHHHHHHHH--HHhc-CCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCc
Q 010896 388 AHATSTLAGDLAEVNAIK--KVFK-DTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDT 464 (498)
Q Consensus 388 ~hgtgt~~~D~~E~~al~--~~f~-~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~ 464 (498)
.| |.+....+. +.++ +..++++++....+||+.+|+|+..++.++.+|+.+
T Consensus 310 i~-------d~F~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~------------------- 363 (387)
T PRK07850 310 IN-------EAFASVVLSWAQVHEPDMDKVNVNGGAIALGHPVGSTGARLITTALHELERT------------------- 363 (387)
T ss_pred ec-------ccchHHHHHHHHHcCCCCCCcCCCCchhhcCCCcchhHHHHHHHHHHHHHhc-------------------
Confidence 99 444433332 3444 234888999999999999999999999999999751
Q ss_pred CCCcccccCccEEEEEccccccceeeEEEeeC
Q 010896 465 VPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 465 v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
..++.+++.++-||...++||+++
T Consensus 364 --------~~~~g~~~~c~~gg~g~a~~~e~~ 387 (387)
T PRK07850 364 --------DKSTALITMCAGGALSTGTIIERI 387 (387)
T ss_pred --------CCCeEEEEEccccCceeEEEEEeC
Confidence 236788888999999999999863
|
|
| >PLN02644 acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.1e-23 Score=212.34 Aligned_cols=268 Identities=23% Similarity=0.296 Sum_probs=190.2
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.+++++||+|||+ +++++| +|++|...... .+ .+ .+..++..+
T Consensus 26 ~~L~~~a~~~al~dAgl---~~~~ID----~vv~g~~~~~~-----------------------~~--~~-~~~~~~~~~ 72 (394)
T PLN02644 26 TELGSIAIQAALERAGV---DPALVQ----EVFFGNVLSAN-----------------------LG--QA-PARQAALGA 72 (394)
T ss_pred HHHHHHHHHHHHHHcCC---CHHHCC----EEEEEecCcCC-----------------------cC--Cc-HHHHHHHhc
Confidence 47999999999999999 445666 67887532100 00 01 223466777
Q ss_pred cCCC--CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hh------------------------------
Q 010896 237 GLMG--PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PT------------------------------ 283 (498)
Q Consensus 237 gl~G--p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~------------------------------ 283 (498)
|+.. |.++|+++|+|++.||..|+++|++|++|++||+|+|.+.. |.
T Consensus 73 Gl~~~~p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (394)
T PLN02644 73 GLPPSTICTTVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYN 152 (394)
T ss_pred CCCCCCceEEEeccchHHHHHHHHHHHHHHcCCCCEEEEEeEEecCCCcccccccccccccccchhhhhccccccccccC
Confidence 8852 77889999999999999999999999999999999886421 00
Q ss_pred --hHHHHh-----hcc----------ccccC----CCCCC-------------------------CC---C--------C
Q 010896 284 --GVGGFI-----ACR----------ALSQR----NEYPK-------------------------RA---S--------R 306 (498)
Q Consensus 284 --~~~~~~-----~~~----------~ls~~----~~~p~-------------------------~~---~--------r 306 (498)
.+..+. ..+ ..+.. +..|. +. . +
T Consensus 153 ~~~~~~~A~~~~~~yG~tre~la~vav~s~~~a~~a~~~~~~~~ei~~~~v~~~~~~~~~~~~~de~~~~~~~~~l~~l~ 232 (394)
T PLN02644 153 DFGMGVCAELCADQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKFDPAKLRKLR 232 (394)
T ss_pred CCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCccceeeEEeccCCCCCceEeecCCCcCCCCHHHHhCCC
Confidence 000000 000 00000 00000 00 0 0
Q ss_pred c-C--C----CCCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCC
Q 010896 307 P-W--D----KDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVS 379 (498)
Q Consensus 307 p-f--d----~~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~ 379 (498)
| | | ...+...++||++++||++++.|++++.+++++|+|++...+.. .........+++++|+++|++
T Consensus 233 p~f~~~~g~vt~~~~~~~~DGaaavvl~s~~~A~~~~~~~~a~I~g~~~~~~~~-----~~~~~~~~~a~~~al~~Agi~ 307 (394)
T PLN02644 233 PSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAP-----ELFTTAPALAIPKALKHAGLE 307 (394)
T ss_pred CcccCCCCcEeccccCCCCcceEEEEeccHHHHHHCCCCeEEEEEEEEEcCCCC-----cccchhHHHHHHHHHHHcCCC
Confidence 1 1 0 01234557999999999999999999999999999999876532 111223357999999999999
Q ss_pred CCCcCEEEccCCCCccCcHHHHHHHH--HHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCC
Q 010896 380 PEEVNYVNAHATSTLAGDLAEVNAIK--KVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNL 456 (498)
Q Consensus 380 ~~dId~i~~hgtgt~~~D~~E~~al~--~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~ 456 (498)
++||||+|.| |.++...+. +.|+- ..++++++.+..+||+.||+|+.++++++++|+..
T Consensus 308 ~~Did~~Ei~-------d~f~~~~l~~~e~lg~~~~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~~~----------- 369 (394)
T PLN02644 308 ASQVDYYEIN-------EAFSVVALANQKLLGLDPEKVNVHGGAVSLGHPIGCSGARILVTLLGVLRSK----------- 369 (394)
T ss_pred HHHCCEEEeC-------cHHHHHHHHHHHHhCCCccccCCCCChHhhCCCHHHHHHHHHHHHHHHHHhc-----------
Confidence 9999999998 777665543 45653 35789999999999999999999999999999762
Q ss_pred CCCCCcCcCCCcccccCccEEEEEccccccceeeEEEeeC
Q 010896 457 EPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 457 ~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
+.++.+++.++-||...++||++.
T Consensus 370 ----------------~~~~g~~~~~~~gg~g~a~~~e~~ 393 (394)
T PLN02644 370 ----------------NGKYGVAGICNGGGGASAIVVELM 393 (394)
T ss_pred ----------------CCCeEEEEEeccCCceeEEEEEec
Confidence 235778878888999999999874
|
|
| >PRK06366 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.9e-23 Score=213.04 Aligned_cols=270 Identities=21% Similarity=0.255 Sum_probs=188.9
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.+++++||+|+|+ +++++| +|++|+..... .....+..++..+
T Consensus 27 ~~L~~~a~~~al~dagi---~~~dID----~vi~g~~~~~~--------------------------~~~~~a~~~~~~~ 73 (388)
T PRK06366 27 PQLGGAAIKAVIDDAKL---DPALVQ----EVIMGNVIQAG--------------------------VGQNPAGQAAYHA 73 (388)
T ss_pred HHHHHHHHHHHHHHcCC---CHHHCC----EEEEEecCCCC--------------------------ccCcHHHHHHHHC
Confidence 47999999999999999 445666 68888532110 0001234567788
Q ss_pred cCCC--CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-h------h--h---H-------HH-Hhhc---
Q 010896 237 GLMG--PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-P------T--G---V-------GG-FIAC--- 291 (498)
Q Consensus 237 gl~G--p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p------~--~---~-------~~-~~~~--- 291 (498)
|+.. |.++++++|+|++.|+..|+++|++|++|++||+|+|.+.. | . . . .. +...
T Consensus 74 Gl~~~~p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 153 (388)
T PRK06366 74 GLPFGVTKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLI 153 (388)
T ss_pred CCCCCCcceeeechhhHHHHHHHHHHHHHhcCCCCEEEEEeeEccccCcccccccccccccccccccchhhhhhcccCcc
Confidence 9964 99999999999999999999999999999999999887431 1 0 0 0 00 0000
Q ss_pred --------cc-----cccCC------------------CCCCC-CC---------------------------CcC-CC-
Q 010896 292 --------RA-----LSQRN------------------EYPKR-AS---------------------------RPW-DK- 310 (498)
Q Consensus 292 --------~~-----ls~~~------------------~~p~~-~~---------------------------rpf-d~- 310 (498)
.. +..++ ..|.. .. +|. +.
T Consensus 154 ~~~~~~~mal~A~~~~~~yGitrE~~a~vAv~s~~~A~~np~ag~~~~ei~p~~~~~~d~~~r~~t~e~~~~s~~v~~p~ 233 (388)
T PRK06366 154 DAFYFEHMGVSAERTARKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFNDLDRDEGIRKTTMEDLAKLPPAFDKN 233 (388)
T ss_pred ccccCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhHhcCCcccccccccccccccCcccCCHHHHhhCCCccCCC
Confidence 00 00000 00111 01 111 10
Q ss_pred ----CCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEE
Q 010896 311 ----DRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYV 386 (498)
Q Consensus 311 ----~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i 386 (498)
..|...++|||+++||.+++.|++.+.++.++|+|++...... .........+++++|+++||+++|||++
T Consensus 234 g~lt~~d~s~~sDGAaAvvl~See~A~~l~~~pv~~I~g~~~~~~~~-----~~~~~~~~~A~~~al~~Agl~~~DiDv~ 308 (388)
T PRK06366 234 GILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDP-----LDFVEAPIPATRKLLEKQNKSIDYYDLV 308 (388)
T ss_pred CCEehhhcCCcccceeEEEEecHHHHHHcCCCcCEEEEEEEEEecCH-----HHhcccHHHHHHHHHHHcCCCHHHccee
Confidence 1123336899999999999999999988888999998875421 1112223689999999999999999999
Q ss_pred EccCCCCccCcHHHHHHHHHHhc-CCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcC
Q 010896 387 NAHATSTLAGDLAEVNAIKKVFK-DTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTV 465 (498)
Q Consensus 387 ~~hgtgt~~~D~~E~~al~~~f~-~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v 465 (498)
|.|...+.. |...++. ++ +..++++++.-..+||+.||+|+..++.++.+|+..
T Consensus 309 Ei~daFa~~----~l~~le~-lgl~g~~vN~~GG~la~GHP~GatG~~~~~~l~~qL~~~-------------------- 363 (388)
T PRK06366 309 EHNEAFSIA----SIIVRDQ-LKIDNERFNVNGGAVAIGHPIGNSGSRIIVTLINALKTR-------------------- 363 (388)
T ss_pred eccchhHHH----HHHHHHH-hCCCCCccCCCCchhhhCCCcCCCHHHHHHHHHHHHHhc--------------------
Confidence 999555442 3333332 23 223788888888899999999999999999999761
Q ss_pred CCcccccCccEEEEEccccccceeeEEEeeC
Q 010896 466 PNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 466 ~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
+.++.+++.+.-||.-.++||++.
T Consensus 364 -------~~~~g~~~~c~~gg~g~a~~~e~~ 387 (388)
T PRK06366 364 -------HMKTGLATLCHGGGGAHTLTLEMV 387 (388)
T ss_pred -------CCCeEEEEEecccChhhEEEEEec
Confidence 236788888899999999999874
|
|
| >TIGR02445 fadA fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.3e-23 Score=208.56 Aligned_cols=271 Identities=18% Similarity=0.228 Sum_probs=186.2
Q ss_pred HHHHHHHHHHHHHH-CCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 157 WRYCLVAGRRALEE-ASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 157 ~~l~l~aa~~AL~d-AG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
..|+.++.+++|++ +|+ +++.+| .|++|....... .+ .| ++.++...
T Consensus 26 ~~L~~~a~~~al~~~agl---~~~~Id----~v~~G~~~~~~~----------------------~g--~~-~ar~~~~~ 73 (385)
T TIGR02445 26 EDLSAHLMSKLLARNPKV---DPAEVE----DIYWGCVQQTLE----------------------QG--FN-IARNAALL 73 (385)
T ss_pred HHHHHHHHHHHHHhccCC---CHHHcC----EEEEeccccccc----------------------cc--ch-HHHHHHHH
Confidence 47999999999995 699 445666 688886321000 00 11 33344445
Q ss_pred hcCCC--CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchh-------------------hHHHHh-----
Q 010896 236 TGLMG--PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPT-------------------GVGGFI----- 289 (498)
Q Consensus 236 lgl~G--p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~-------------------~~~~~~----- 289 (498)
.|+.. |.++|+++|+||+.|++.|++.|++|++|++||||+|.+.... ..+.+.
T Consensus 74 ~g~~~~~p~~tV~~~CaSG~~Ai~~Aa~~I~sG~~d~vlagG~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 153 (385)
T TIGR02445 74 AQIPHTSAAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMGHVPMMHGVDFHPGMSLHVAKAAGMMGLTAEMLG 153 (385)
T ss_pred CCCCCCcchhhhhhhhHHHHHHHHHHHHHHHCCCCCEEEEeeehhcccCccccCCCcchhHHhhhccccchHHHHHHHHH
Confidence 55533 6799999999999999999999999999999999999752110 000000
Q ss_pred -----------------hccccc--------c---------CC-----CCCCCCCCc-------------CCC------C
Q 010896 290 -----------------ACRALS--------Q---------RN-----EYPKRASRP-------------WDK------D 311 (498)
Q Consensus 290 -----------------~~~~ls--------~---------~~-----~~p~~~~rp-------------fd~------~ 311 (498)
..+... . .+ .+|+...|+ |+. .
T Consensus 154 ~~ygitre~~d~~A~~sh~~a~~a~~~g~f~nei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~ 233 (385)
T TIGR02445 154 KMHGISREQQDAFAARSHARAHAATQEGKFKNEIIPTQGHDADGFLKQFDYDEVIRPETTVESLAALRPAFDPKNGTVTA 233 (385)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeeeccCCCCceeeCCCCCCCCCCCHHHHhcCCceecCCCCceec
Confidence 000000 0 00 013333321 221 1
Q ss_pred CCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCC
Q 010896 312 RDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHAT 391 (498)
Q Consensus 312 ~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgt 391 (498)
.|...++||++++||++++.|++++.+++++|+|++.+.. .|...+.+...+++++|+++||+|+||||+|.|..
T Consensus 234 ~~~~~~sDGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~-----~~~~~~~~~~~a~~~al~~AGi~p~DId~~Ei~da 308 (385)
T TIGR02445 234 GTSSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGC-----DPSIMGYGPVPATQKALKRAGLSISDIDVFELNEA 308 (385)
T ss_pred ccCCCcCCceEEEEEecHHHHHHCCCCeeEEEEEEEEcCC-----CCcccchhHHHHHHHHHHHcCCCHHHcCEEEEccc
Confidence 3445579999999999999999999999999999998742 12223334578999999999999999999999944
Q ss_pred CCccCcHHHHHHHHHHhc--C--CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCC
Q 010896 392 STLAGDLAEVNAIKKVFK--D--TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPN 467 (498)
Q Consensus 392 gt~~~D~~E~~al~~~f~--~--~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~ 467 (498)
.+.. |...++ .++ + ..++++++....+||+.||+|+..++.+++.|+.
T Consensus 309 Fa~~----~l~~~e-~lg~~~~g~~~vN~~GG~la~GhP~GATG~r~v~~l~~~l~~----------------------- 360 (385)
T TIGR02445 309 FAAQ----ALPCLK-DLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMEQ----------------------- 360 (385)
T ss_pred cHHH----HHHHHH-HcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHh-----------------------
Confidence 3322 222222 233 2 2578888888889999999999888888865543
Q ss_pred cccccCccEEEEEccccccceeeEEEeeC
Q 010896 468 VKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 468 ~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
.+.++.++++++-||.-.++||+++
T Consensus 361 ----~~~~~Gl~~~~~g~g~g~a~~~e~~ 385 (385)
T TIGR02445 361 ----KDATFGLATMCIGLGQGIATVFERV 385 (385)
T ss_pred ----cCCCeEEEEEecccChhheEEEEeC
Confidence 1346789999999999999999864
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli. |
| >PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.4e-23 Score=210.07 Aligned_cols=268 Identities=19% Similarity=0.231 Sum_probs=187.5
Q ss_pred HHHHHHHHHHHHH-HCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 157 WRYCLVAGRRALE-EASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 157 ~~l~l~aa~~AL~-dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
..|+..+.+++|+ ++|+ +++++| .+++|...... .. ....+.+++..
T Consensus 28 ~~L~~~~~~~al~~~agl---~~~~Id----~vi~g~~~~~~-----------------------~~--g~~~ar~~~~~ 75 (387)
T PRK08947 28 EDLSAHLMRSLLARNPAL---DPAEID----DIIWGCVQQTL-----------------------EQ--GFNIARNAALL 75 (387)
T ss_pred HHHHHHHHHHHHHhccCc---ChHHhC----eEEEEeccccc-----------------------cc--cccHHHHHHHH
Confidence 4788999999999 4899 445566 58888532100 00 01123346667
Q ss_pred hcCCC--CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchh-------------------hHHHHh-----
Q 010896 236 TGLMG--PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPT-------------------GVGGFI----- 289 (498)
Q Consensus 236 lgl~G--p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~-------------------~~~~~~----- 289 (498)
.|+.. |.++|+++|+||+.|+..|+++|++|++|++||||+|.+.... ..+.+.
T Consensus 76 ~Gl~~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 155 (387)
T PRK08947 76 AGIPHSVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHVPMNHGVDFHPGLSKNVAKAAGMMGLTAEMLG 155 (387)
T ss_pred cCCCCCCcceeeechhHHHHHHHHHHHHHHHCCCCCEEEEccccccccCccccccCcchhhhhhccccchHHHHHHHHHH
Confidence 78753 7799999999999999999999999999999999999753210 000000
Q ss_pred -hc----------------cccc--------c----------CC----CCCCCCC------------CcC-CC------C
Q 010896 290 -AC----------------RALS--------Q----------RN----EYPKRAS------------RPW-DK------D 311 (498)
Q Consensus 290 -~~----------------~~ls--------~----------~~----~~p~~~~------------rpf-d~------~ 311 (498)
+. +... . ++ .+|+... +|. +. .
T Consensus 156 ~~ygisre~~~~~avksh~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~ 235 (387)
T PRK08947 156 KMHGISREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDADGVLKLFDYDEVIRPETTVEALAALRPAFDPVNGTVTA 235 (387)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeeeecCCCCCceeecCCCCCcCCCCHHHHhcCCceeeCCCCcEEc
Confidence 00 0000 0 00 0122211 111 21 2
Q ss_pred CCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCC
Q 010896 312 RDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHAT 391 (498)
Q Consensus 312 ~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgt 391 (498)
.+...++||++++||++++.|++.+.+++++|+|++.+.+.. ...+.....+++++|+++||+|+|||++|.|
T Consensus 236 ~~~~~~sDGAaAvvl~s~~~A~~~g~~p~~~I~g~~~~~~~~-----~~~~~~~~~a~~~al~~Agl~~~DId~~El~-- 308 (387)
T PRK08947 236 GTSSALSDGASAMLVMSESRAKELGLKPRARIRSMAVAGCDP-----SIMGYGPVPATQKALKRAGLSISDIDVFELN-- 308 (387)
T ss_pred cccCCcCCceEEEEEccHHHHHHCCCCccEEEEEEEEcCcCc-----ccccccHHHHHHHHHHHcCCCHHHCCEEEec--
Confidence 344567999999999999999999999999999999874321 1122234678999999999999999999999
Q ss_pred CCccCcHHHHHHHH--HHhc--C--CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcC
Q 010896 392 STLAGDLAEVNAIK--KVFK--D--TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTV 465 (498)
Q Consensus 392 gt~~~D~~E~~al~--~~f~--~--~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v 465 (498)
|.+....+. +.|+ + ..++++++....+||+.||+|+..++.++++|+.
T Consensus 309 -----d~F~~~~l~~~e~lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~~L~~--------------------- 362 (387)
T PRK08947 309 -----EAFAAQSLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMER--------------------- 362 (387)
T ss_pred -----ccchHHHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHh---------------------
Confidence 444433333 2233 2 2578899999999999999999999999999976
Q ss_pred CCcccccCccEEEEEccccccceeeEEEee
Q 010896 466 PNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 466 ~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
.+.++++++++|-||..+.+||++
T Consensus 363 ------~~~~~gl~~~~~g~G~g~a~~~e~ 386 (387)
T PRK08947 363 ------KDAQFGLATMCIGLGQGIATVFER 386 (387)
T ss_pred ------cCCCEEEEEEeecccceeEEEEEe
Confidence 134788999998888888888886
|
|
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-22 Score=209.03 Aligned_cols=280 Identities=19% Similarity=0.200 Sum_probs=192.7
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.+++++||+|||+ +++++| ++++|+..... ....++..++..+
T Consensus 22 ~eLa~~A~~~AL~dAgi---~~~dID----~vi~g~~~~~~--------------------------~~~~~a~~v~~~l 68 (385)
T PRK12578 22 QELAWESIKEALNDAGV---SQTDIE----LVVVGSTAYRG--------------------------IELYPAPIVAEYS 68 (385)
T ss_pred HHHHHHHHHHHHHHcCC---CHHHCC----EEEEEeccccc--------------------------ccCChHHHHHHHh
Confidence 47999999999999999 445566 67787632100 0011245688889
Q ss_pred cCCC-CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccch---------------------hh-----HHHHh
Q 010896 237 GLMG-PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIP---------------------TG-----VGGFI 289 (498)
Q Consensus 237 gl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p---------------------~~-----~~~~~ 289 (498)
|+++ +.++|+++|+|++.||..|++.|++|++|.+||+|+|.+... .. +..+.
T Consensus 69 Gl~~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~ 148 (385)
T PRK12578 69 GLTGKVPLRVEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYGTTFPTYYALY 148 (385)
T ss_pred CCCCCCeeEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcccchhhhcccccccccccccCCCChHHHHHHH
Confidence 9976 678999999999999999999999999999999999963211 00 00000
Q ss_pred hccccccC------------------CCCCCC----------------CCCcCCCCCCCccccceeEEEEEcchHHHHhc
Q 010896 290 ACRALSQR------------------NEYPKR----------------ASRPWDKDRDGFVMGEGCGILVMESLEHAMKR 335 (498)
Q Consensus 290 ~~~~ls~~------------------~~~p~~----------------~~rpfd~~~~G~v~gEGaaavvLe~~~~A~~~ 335 (498)
....+..+ ...|.. -+.|+. .-|...++||++++||++++.|++.
T Consensus 149 a~~~m~~~g~t~e~~a~va~~~~~~A~~np~a~~~~~i~~e~v~~s~~i~~Pl~-~~d~~~~~DGAaA~vl~s~e~A~~l 227 (385)
T PRK12578 149 ATRHMAVYGTTEEQMALVSVKAHKYGAMNPKAHFQKPVTVEEVLKSRAISWPIK-LLDSCPISDGSATAIFASEEKVKEL 227 (385)
T ss_pred HHHHHHHhCcCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCccCCCcc-HhhcCCcCCCeEEEEEecHHHHHhc
Confidence 00000000 000111 111221 2345557999999999999999998
Q ss_pred CCcEEEEEEeEEEecCCCCCCC-CCCCh-HHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhc--C-
Q 010896 336 GANIIAEYLGGAVTCDAHHMTD-PRSDG-LGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFK--D- 410 (498)
Q Consensus 336 g~~i~a~I~g~~~~~dg~~~~~-p~~~~-~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~--~- 410 (498)
+.+++++|+|++..++..+... |+... .+...++++||++||++++|||++|.|.+.|. .|...+... + .
T Consensus 228 ~~~~~~~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~~ei~d~ft~----~~l~~le~l-Gl~~~ 302 (385)
T PRK12578 228 KIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEVATVHDAFTI----AEIMGYEDL-GFTEK 302 (385)
T ss_pred CCCCCeEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcChH----HHHHHHHHc-CCCCC
Confidence 8667789999999877655332 23222 35568999999999999999999999998874 355554432 2 0
Q ss_pred ----------------CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCccccc-C
Q 010896 411 ----------------TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQH-H 473 (498)
Q Consensus 411 ----------------~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~-~ 473 (498)
..++++++.-...||+.+|+|+..++.++++|+...= ..|.. .
T Consensus 303 G~~~~~~~~G~~~~~G~~pvN~~GG~la~GhP~gatG~~~v~e~~~qLrg~ag--------------------~~qv~~~ 362 (385)
T PRK12578 303 GKGGKFIEEGQSEKGGKVGVNLFGGLKAKGHPLGATGLSMIYEITKQLRDEAG--------------------KLQQPLK 362 (385)
T ss_pred CchHHHHHCCCccCCCCeeeCCCCCcccCCCCccHHHHHHHHHHHHHHhCCcc--------------------cCcCCcc
Confidence 1256777777778999999999999999999987421 11112 2
Q ss_pred ccEEEEEccc-cccceeeEEEee
Q 010896 474 VNVAISNSFG-FGGHNSVVVFAP 495 (498)
Q Consensus 474 ~~~alv~s~G-~gG~n~~~vl~~ 495 (498)
.+++++.+.| .|.++...||++
T Consensus 363 ~~~~l~~~~Gg~~~~~~~~v~~~ 385 (385)
T PRK12578 363 KYIGLVHNVGGTGHFAYVMILRR 385 (385)
T ss_pred hheEEEeccCcchhhEEEEEEeC
Confidence 4688888887 555566667754
|
|
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.3e-22 Score=205.07 Aligned_cols=278 Identities=17% Similarity=0.198 Sum_probs=185.1
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.+|+++||+|||+ +++++| ++++++... . + ....++..+
T Consensus 29 ~eL~~eA~~~Al~dAgl---~~~dID----~iv~~~~~~-----------------------~----~---~~~~la~~l 71 (384)
T PRK06158 29 MELLAQAAHRALADAGL---TMADVD----GLFTASPDD-----------------------A----L---WGLSVAEYL 71 (384)
T ss_pred HHHHHHHHHHHHHHcCC---CHHHCC----EEEEecCCC-----------------------C----C---cHHHHHHHc
Confidence 47999999999999999 445666 677765210 0 0 113477788
Q ss_pred cCCC-CccccccccchHHHHHHHHHHHHHcCCCcEEEEe-ccccccc---------------h------hhHHHHhhccc
Q 010896 237 GLMG-PNYSISTACATANYCFYAAANHIRRGETDIMVAG-GTEAAII---------------P------TGVGGFIACRA 293 (498)
Q Consensus 237 gl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvg-g~d~~~~---------------p------~~~~~~~~~~~ 293 (498)
|+++ |.+.+.++|+|+..+|..|++.|++|.+|.+||+ |.+.... | ..++.+.....
T Consensus 72 Gl~~~~~~~~~~g~~s~~~al~~A~~~I~sG~~d~vLV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~y 151 (384)
T PRK06158 72 GIRPRFVDGTMIGGSSFLAHLLPAALALEAGLCDVALICYGSNQRSAGGKLRSMLDPQPYEAPYKPVNPVSAYALAAARH 151 (384)
T ss_pred CCCCeeeccccCccHHHHHHHHHHHHHHHcCCCCEEEEeeccccccCcccccccccccchhcccCCCCcHHHHHHHHHHH
Confidence 9876 7778899999999999999999999999999975 6653210 0 00111100000
Q ss_pred cccC------------------CCCCC----------------CCCCcCCCCCCCccccceeEEEEEcchHHHHhcCCcE
Q 010896 294 LSQR------------------NEYPK----------------RASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANI 339 (498)
Q Consensus 294 ls~~------------------~~~p~----------------~~~rpfd~~~~G~v~gEGaaavvLe~~~~A~~~g~~i 339 (498)
+..+ ...|. --+.|+.. .+...++||++++||++++.|++.+.++
T Consensus 152 m~~yG~t~e~~a~vav~~~~~a~~NP~A~~~~~~t~e~vl~s~~ia~Pl~~-~d~~~~~DGAaAvVL~s~e~A~~l~~~~ 230 (384)
T PRK06158 152 MHQYGTTREQLAEVAVAARQWAQLNPEAFMRDPLTIDDVLAARMVSDPLSV-RDCCLVTDGAGAVVMVRADRARDLPRPP 230 (384)
T ss_pred HHHHCcCHHHHHHHHHHHHHHHhcCchhhhCCCCCHHHHhcCCccCCCCch-hhcCCccCCeEEEEEecHHHHhhcCCCc
Confidence 0000 00111 11234443 5677899999999999999999877664
Q ss_pred EEEEEeEEEecCCCCCC-CCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHH--------HHh-c
Q 010896 340 IAEYLGGAVTCDAHHMT-DPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIK--------KVF-K 409 (498)
Q Consensus 340 ~a~I~g~~~~~dg~~~~-~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~--------~~f-~ 409 (498)
..|.|++...+..... .++.......+++++||++|||+|+|||++|.|.+.|.. ..+..++|- +.+ .
T Consensus 231 -v~i~g~~~~~~~~~~~~~~~~~~~~~~~aa~~A~~~AGi~p~DId~~ElyD~Fs~~-~l~~~E~lG~~~~Ge~~~~~~~ 308 (384)
T PRK06158 231 -VYVLGAAAATWHRQISSMPDLTVTAAAESGPRAFAMAGLTPADIDVVELYDAFTIN-TILFLEDLGFCAKGEGGAFVEG 308 (384)
T ss_pred -EEEEEEEEecCCcccccccchhhhHHHHHHHHHHHHcCCCHHHCcEEEecCCchHH-HHHHHHHcCCCCCCcHHHHHHC
Confidence 5688888776654332 233334456789999999999999999999999887665 334333331 001 0
Q ss_pred ------CCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccc
Q 010896 410 ------DTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFG 483 (498)
Q Consensus 410 ------~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G 483 (498)
...+++.++.-...||+ ||+|+.+++++++||+... ...|..+.++++++++|
T Consensus 309 G~~~~~G~~PvN~sGG~ls~Ghp-gatG~~~~~E~~~QLrg~a--------------------g~rQv~~a~~gl~~~~G 367 (384)
T PRK06158 309 GRIAPGGRLPVNTNGGGLSCVHP-GMYGLFLLIEAVRQLRGEA--------------------GERQVAGAEVALAHGNG 367 (384)
T ss_pred CCCccCCCccccCCChhhcCCCC-chhhHHHHHHHHHHHcCCC--------------------CCCcCCCCCEEEEECCC
Confidence 11245555666667999 9999999999999998742 11223355788998887
Q ss_pred -cccceeeEEEee
Q 010896 484 -FGGHNSVVVFAP 495 (498)
Q Consensus 484 -~gG~n~~~vl~~ 495 (498)
++..+..+|+++
T Consensus 368 g~~~~~~~~vl~~ 380 (384)
T PRK06158 368 GVLSSQATAILGT 380 (384)
T ss_pred CcccceEEEEEec
Confidence 444555667765
|
|
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.1e-22 Score=206.68 Aligned_cols=285 Identities=19% Similarity=0.211 Sum_probs=189.6
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.+++++||+|||++ ++++| .+++++.... ....+..+..++..+
T Consensus 24 ~~La~~A~~~Al~dAgl~---~~dId----~vi~~~~~~~-------------------------~~~~~~~a~~va~~l 71 (399)
T PRK06059 24 VEYGVVAARAALADAGLD---WRDVQ----LVVGADTIRN-------------------------GYPGFVAGATFAQAL 71 (399)
T ss_pred HHHHHHHHHHHHHHcCCC---HHHCC----EEEEEeccCC-------------------------ccCCccHHHHHHHHh
Confidence 478999999999999994 44455 4555542110 001122346788899
Q ss_pred cCCC-CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc----h----------------hhH-----HHHhh
Q 010896 237 GLMG-PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII----P----------------TGV-----GGFIA 290 (498)
Q Consensus 237 gl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~----p----------------~~~-----~~~~~ 290 (498)
|+++ |.++++++|+|++.||..|+++|++|++|.+||+|+|.+.. + ..+ ..+..
T Consensus 72 G~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a 151 (399)
T PRK06059 72 GWNGAPVSSSYAACASGSQALQSARAQILAGLCDVALVVGADTTPKGFFAPVGGERPDDPDWLRFHLIGATNPVYFALLA 151 (399)
T ss_pred CCCCCceecccchhHHHHHHHHHHHHHHHCCCCCEEEEEEEcccCCCCCcccccccccccchhhcccCCCccHHHHHHHH
Confidence 9988 89999999999999999999999999999999999996421 1 000 00000
Q ss_pred ccccccC------------------CCCCCCCC----------------CcCCCCCCCccccceeEEEEEcchHHHHhc-
Q 010896 291 CRALSQR------------------NEYPKRAS----------------RPWDKDRDGFVMGEGCGILVMESLEHAMKR- 335 (498)
Q Consensus 291 ~~~ls~~------------------~~~p~~~~----------------rpfd~~~~G~v~gEGaaavvLe~~~~A~~~- 335 (498)
...+..+ ..+|+... .|+. .-|...+.|||+++||.+++.|++.
T Consensus 152 ~~~~~~yg~s~e~~a~v~~~~~~~a~~Np~A~~r~~~t~e~v~~s~~i~~Pl~-~~d~~~~~DGAaA~vl~s~~~A~~l~ 230 (399)
T PRK06059 152 RRRMDLYGATVEDFAQVKVKNARHGLLNPNARYRKEVTVEDVLASPVVSDPLR-LLDICATSDGAAALIVASKSFARRHL 230 (399)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHccCcHhhcCCCCCHHHHhcCCcccCCCc-hhhcCCCCCceEEEEEecHHHHHhhc
Confidence 0000000 01121111 1211 1244557899999999999999888
Q ss_pred -CCcEEEEEEeEEEecCCCCCC--------------CCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHH
Q 010896 336 -GANIIAEYLGGAVTCDAHHMT--------------DPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAE 400 (498)
Q Consensus 336 -g~~i~a~I~g~~~~~dg~~~~--------------~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E 400 (498)
+.+..++|+|++...+..+.. .+.+.......+.+++|+++|++++|||++|.|.+.+.. ....
T Consensus 231 ~~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~~a~~~agl~~~Did~~El~d~f~~~-~l~~ 309 (399)
T PRK06059 231 GSVAGVPSVRAISTVTPRYPQHLPELPDIATDSTAAVPAPERVFKDQILDAAYAEAGIGPEDLSLAEVYDLSTAL-ELDW 309 (399)
T ss_pred cccCCceEEEEEEEecccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCcEEeecccChHH-HHHH
Confidence 656678899998765332110 111122223578999999999999999999999876554 2222
Q ss_pred HHHHH--------HHh-------cCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcC
Q 010896 401 VNAIK--------KVF-------KDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTV 465 (498)
Q Consensus 401 ~~al~--------~~f-------~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v 465 (498)
.++|. +.+ ++..++++++.-...||+.||+|+..++.+++||+...
T Consensus 310 ~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qLrg~a------------------- 370 (399)
T PRK06059 310 YEHLGLCPKGEAEALLRSGATTLGGRIPVNPSGGLACFGEAIPAQAIAQVCELTWQLRGQA------------------- 370 (399)
T ss_pred HHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCCccCCccHHHHHHHHHHHhccCc-------------------
Confidence 23221 111 11225677777777899999999999999999998732
Q ss_pred CCcccccCccEEEEEccccccceeeEEEee
Q 010896 466 PNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 466 ~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
...|..+.+++++.+.|.+|..+++||++
T Consensus 371 -g~~Qv~~a~~gl~~~~g~~g~~~~~~l~~ 399 (399)
T PRK06059 371 -GGRQVEGARVGITANQGLFGHGSSVIVAR 399 (399)
T ss_pred -CCccCCCccEEEEeccCCcccceEEEecC
Confidence 11233356788888888889999999875
|
|
| >PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.6e-22 Score=208.19 Aligned_cols=273 Identities=19% Similarity=0.244 Sum_probs=187.9
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.+++++||+|+|++ ++.+| .|++|+..... . ...++..++..+
T Consensus 30 ~eL~~~a~~~al~~agl~---~~~ID----~vi~G~~~~~~-----------------------~---~~~~ar~~a~~a 76 (428)
T PRK08963 30 VDLGKMVVGELLARSEID---PELIE----QLVFGQVVQMP-----------------------E---APNIAREIVLGT 76 (428)
T ss_pred HHHHHHHHHHHHHHcCCC---HHHCC----EEEEeccCCCC-----------------------C---ccHHHHHHHHHC
Confidence 478999999999999994 44566 68888632100 0 011344577888
Q ss_pred cCC--CCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhH--H-----------------H---Hhh--
Q 010896 237 GLM--GPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGV--G-----------------G---FIA-- 290 (498)
Q Consensus 237 gl~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~--~-----------------~---~~~-- 290 (498)
|+. -|.++|+++|+||+.|+..|++.|++|++|++||||+|.+...... . . +..
T Consensus 77 Gl~~~~P~~tV~~aCaSG~~Ai~~Aa~~I~sG~~dvvLvgG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (428)
T PRK08963 77 GMNVHTDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLR 156 (428)
T ss_pred CCCCCCcceeehhhhHHHHHHHHHHHHHHHCCCCCEEEEecccccCCCccccccccccchhccccccccCcccccccccc
Confidence 986 3999999999999999999999999999999999999975321100 0 0 000
Q ss_pred -------------------cc-----ccccCCCC----------------------------------CCC-------CC
Q 010896 291 -------------------CR-----ALSQRNEY----------------------------------PKR-------AS 305 (498)
Q Consensus 291 -------------------~~-----~ls~~~~~----------------------------------p~~-------~~ 305 (498)
++ ....++.+ |.. ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~m~~~A~~~~~~ygisre~~~~~avksh~~a~~~~~~g~~~~ei~p~~~~p~a~~~~~D~~~ 236 (428)
T PRK08963 157 LRDLLPVPPAVAEYSTGLRMGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYKQPLEEDNNI 236 (428)
T ss_pred hhhccccCcccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeEEecCCceeeCCCCCC
Confidence 00 00000000 100 01
Q ss_pred C------------c-CCC------CCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCC-ChHHH
Q 010896 306 R------------P-WDK------DRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRS-DGLGV 365 (498)
Q Consensus 306 r------------p-fd~------~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~-~~~~~ 365 (498)
| | |+. ..+...++|||+++||++++.|++.+.+++++|.+++.... .|.. .....
T Consensus 237 r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~~DGAaA~vl~see~A~~l~~~p~~~i~g~~~~~~-----~~~~~~~~~~ 311 (428)
T PRK08963 237 RGDSTLEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAI-----DVWQDMLLGP 311 (428)
T ss_pred CCCCCHHHHhcCCccccCCCCceehhhcCCCCCceEEEEEecHHHHHHcCCCccEEEEEEecccC-----CchhhhhhHH
Confidence 1 1 110 11233468999999999999999999999999999887641 1111 12334
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHH--HH----hc------C--CCcccccccccccCCcchhhh
Q 010896 366 SSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIK--KV----FK------D--TSEMKMNGTKSMIGHGLGAAG 431 (498)
Q Consensus 366 ~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~--~~----f~------~--~~~~~v~s~K~~~Gh~~~AaG 431 (498)
..+++++|+++||+++|||++|.|...+.. ...+.+.+. .. ++ . ..++++++.-...||+.||+|
T Consensus 312 ~~a~~~al~~AGl~~~DiD~~Ei~d~Fa~~-~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gasG 390 (428)
T PRK08963 312 AYATPLALERAGLTLADLTLIDMHEAFAAQ-TLANLQMFASERFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATG 390 (428)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEccccHHH-HHHHHHHhcCchhhhhcccccccCCCCCCCccCCCCCHHhcCCCccccH
Confidence 678999999999999999999999776543 233333331 00 01 1 126777777778899999999
Q ss_pred HHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 432 GLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 432 ~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
+..++.++++|+.. ..++++++.++-||...++||+.
T Consensus 391 ~~~~~e~~~qLrg~---------------------------~g~~gl~~~c~ggG~g~a~~ie~ 427 (428)
T PRK08963 391 ARMITQTLHELRRR---------------------------GGGLGLTTACAAGGLGAAMVLEV 427 (428)
T ss_pred HHHHHHHHHHHhhc---------------------------CCCEEEEEEccccChhhEEEEEe
Confidence 99999999999762 12478999999999999999985
|
|
| >PRK07801 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.9e-22 Score=205.66 Aligned_cols=270 Identities=17% Similarity=0.212 Sum_probs=182.5
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.+++++||+|+|+ +++++| +|++|+... .. ....+ ++..+....
T Consensus 27 ~~L~~~a~~~al~dagl---~~~~ID----~vv~g~~~~-~~-----------------------~~~~~-~~~~~~l~~ 74 (382)
T PRK07801 27 ADLGAHVLKGLVDRTGI---DPAAVD----DVIFGCVDT-IG-----------------------PQAGN-IARTSWLAA 74 (382)
T ss_pred HHHHHHHHHHHHHHcCC---CHHHcC----EEEEEeecc-CC-----------------------ccccc-HHHHHHHHc
Confidence 47999999999999999 445566 677775210 00 00000 111111223
Q ss_pred cC--CCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hh--h--HH---H----------Hhh-cc---
Q 010896 237 GL--MGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PT--G--VG---G----------FIA-CR--- 292 (498)
Q Consensus 237 gl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~--~--~~---~----------~~~-~~--- 292 (498)
|+ ..|.++|+++|+|++.|+..|++.|++|++|++||+|+|.+.. |. . .. . +.. .+
T Consensus 75 gl~~~~p~~~v~~acaSg~~Av~~Aa~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 154 (382)
T PRK07801 75 GLPEEVPGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWLHRYGDQE 154 (382)
T ss_pred CCCCCCceeeecchhhhHHHHHHHHHHHHHCCCCCEEEEcchhhhcCCcccccccccccccCCcccccCcchhhhccCCC
Confidence 33 4588899999999999999999999999999999999995422 21 0 00 0 000 00
Q ss_pred ---------ccccCCCC-----------------------------CC-----------------CCCCcCC-----CCC
Q 010896 293 ---------ALSQRNEY-----------------------------PK-----------------RASRPWD-----KDR 312 (498)
Q Consensus 293 ---------~ls~~~~~-----------------------------p~-----------------~~~rpfd-----~~~ 312 (498)
.+..++.+ |- ...+|.. ...
T Consensus 155 ~~~~~~a~~~~~~yG~tre~~a~vav~~~~~a~~n~~ag~~~~~~~p~~~~~~d~~~~~~t~e~~~~~~~i~~~~pl~~~ 234 (382)
T PRK07801 155 VSQFRGAELIAEKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPVGGVTVDEGPRETSLEKMAGLKPLVEGGRLTAA 234 (382)
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccccCccccCCcCcCCHHHHhcCCCCCCCCCcccc
Confidence 00000000 00 0011111 123
Q ss_pred CCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCC
Q 010896 313 DGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATS 392 (498)
Q Consensus 313 ~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtg 392 (498)
|...++||++++||++++.|++.+.+++++|.+++...+... ....+...+++++|+++||+++|||++|.|...
T Consensus 235 d~~~~~DGaaa~il~s~e~a~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~a~~~a~~~agi~~~did~~e~~d~F 309 (382)
T PRK07801 235 VASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPV-----FMLTAPIPATRYALEKTGLSIDDIDVVEINEAF 309 (382)
T ss_pred cCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCChH-----hhccChHHHHHHHHHHcCCCHHHcCEeeecccc
Confidence 444578999999999999999999888899999876653211 011122568999999999999999999999655
Q ss_pred CccCcHHHHHHHHHHhc-CCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccc
Q 010896 393 TLAGDLAEVNAIKKVFK-DTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQ 471 (498)
Q Consensus 393 t~~~D~~E~~al~~~f~-~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~ 471 (498)
+.. |...++. ++ ...++++++....+||+.+|+|+..++.++.+|+..
T Consensus 310 a~~----~~~~~e~-lG~~~~pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~~~-------------------------- 358 (382)
T PRK07801 310 APV----VLAWLKE-TGADPAKVNPNGGAIALGHPLGATGAKLMTTLLHELERT-------------------------- 358 (382)
T ss_pred hHH----HHHHHHH-hCCCchhcCCCcchhhhcCcHHHHHHHHHHHHHHHHHhc--------------------------
Confidence 432 3333333 33 235789999999999999999999999999999871
Q ss_pred cCccEEEEEccccccceeeEEEee
Q 010896 472 HHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 472 ~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
+.|+++.++.|.||+..++||++
T Consensus 359 -~~~~gl~~~~gggg~~~~~vl~~ 381 (382)
T PRK07801 359 -GGRYGLQTMCEGGGTANVTIIER 381 (382)
T ss_pred -CCCEEEEEEcccccceeEEEEEe
Confidence 23678899999899999999875
|
|
| >PRK07516 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.3e-22 Score=204.94 Aligned_cols=285 Identities=22% Similarity=0.288 Sum_probs=190.3
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.+++++||+|+|+ +++++| +|++|+..+.... ..... +..+...+
T Consensus 23 ~eL~~eA~~~AL~dAgl---~~~dId----~vi~g~~~~~~~~----------------------~~~~~--~~~~~~~~ 71 (389)
T PRK07516 23 ESLIVRVAREALAHAGI---AAGDVD----GIFLGHFNAGFSP----------------------QDFPA--SLVLQADP 71 (389)
T ss_pred HHHHHHHHHHHHHHcCC---CHHHCC----EEEEEEecCCccc----------------------cccch--hHHHHHhc
Confidence 47999999999999999 445566 7888864322100 00000 11122334
Q ss_pred cCCC-CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hh---------------------hH---HHHhh
Q 010896 237 GLMG-PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PT---------------------GV---GGFIA 290 (498)
Q Consensus 237 gl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~---------------------~~---~~~~~ 290 (498)
+++. |.++|+++|+|++.||..|+++|++|++|.+||+|+|.+.. |. .+ ..+..
T Consensus 72 gl~~~p~~~v~~~CaSg~~Al~~A~~~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a 151 (389)
T PRK07516 72 ALRFKPATRVENACATGSAAVYAALDAIEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPGGFAGVFGRIA 151 (389)
T ss_pred CCCCCceeeeccccHHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCCCcHHHHHHHH
Confidence 5554 88999999999999999999999999999999999987421 10 00 00000
Q ss_pred cccc----------------ccC--CCCCCCC--------------------CCcCCCCCCCccccceeEEEEEcchHHH
Q 010896 291 CRAL----------------SQR--NEYPKRA--------------------SRPWDKDRDGFVMGEGCGILVMESLEHA 332 (498)
Q Consensus 291 ~~~l----------------s~~--~~~p~~~--------------------~rpfd~~~~G~v~gEGaaavvLe~~~~A 332 (498)
.+.+ +.. ...|... ..|+. ..|...++|||+++||.+++.|
T Consensus 152 ~~y~~~yg~~~e~~a~vav~~~~~A~~nP~A~~~~~~t~~~~~~~~~~~~~i~~pl~-~~d~~~~~DGAaa~il~s~~~a 230 (389)
T PRK07516 152 QAYFQRYGDQSDALAMIAAKNHANGVANPYAQMRKDLGFEFCRTVSEKNPLVAGPLR-RTDCSLVSDGAAALVLADAETA 230 (389)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHhhhcCChhhcCCcccHHhhhhhhhcCCcccCCCc-hhhcCCcCcceEEEEEecHHHH
Confidence 0000 000 0001100 11222 2455568999999999999999
Q ss_pred HhcCCcEEEEEEeEEEecCCCCCCCCCC-ChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHH-----
Q 010896 333 MKRGANIIAEYLGGAVTCDAHHMTDPRS-DGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKK----- 406 (498)
Q Consensus 333 ~~~g~~i~a~I~g~~~~~dg~~~~~p~~-~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~----- 406 (498)
++.+. +++|+|++...+..+....++ ...+...+++++|+++||+|+|||++|.|.+.|.. ..++.++|.-
T Consensus 231 ~~~~~--~v~i~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~did~~e~~d~f~~~-~~~~~e~lg~~~~G~ 307 (389)
T PRK07516 231 RALQR--AVRFRARAHVNDFLPLSRRDPLAFEGPRRAWQRALAQAGVTLDDLSFVETHDCFTIA-ELIEYEAMGLAPPGQ 307 (389)
T ss_pred HhcCC--CEEEEEEEeccCcccccCCCccccHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCHH-HHHHHHHcCCCCCCc
Confidence 88853 578999998877655433232 34666789999999999999999999999999886 5555555421
Q ss_pred ---Hhc-------CCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccE
Q 010896 407 ---VFK-------DTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNV 476 (498)
Q Consensus 407 ---~f~-------~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~ 476 (498)
.+. +..+++.++.-..+||+.||+|+.+++.+++||+... ...|..+.++
T Consensus 308 ~~~~~~~g~~~~~g~~pvN~sGG~la~Ghp~gasG~~~~~e~~~QL~g~a--------------------g~rQv~~a~~ 367 (389)
T PRK07516 308 GARAIREGWTAKDGKLPVNPSGGLKAKGHPIGATGVSMHVLAAMQLTGEA--------------------GGMQIPGAKL 367 (389)
T ss_pred hHHHHHCCCccCCCCeeecCCCCcccCCCCccHHHHHHHHHHHHHhcCCc--------------------cCCcCCchhe
Confidence 111 1124555555557899999999999999999999843 1223345678
Q ss_pred EEEEccc-cccceeeEEEeeC
Q 010896 477 AISNSFG-FGGHNSVVVFAPF 496 (498)
Q Consensus 477 alv~s~G-~gG~n~~~vl~~~ 496 (498)
+++++.| .+.+++.+||++.
T Consensus 368 ~l~~~~gg~~~~~~~~vl~~~ 388 (389)
T PRK07516 368 AGVFNMGGAAVANYVSILERV 388 (389)
T ss_pred eeeeccCcccceEEEEEEEec
Confidence 8988887 5556677777765
|
|
| >PRK06504 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.2e-22 Score=203.07 Aligned_cols=270 Identities=17% Similarity=0.150 Sum_probs=182.5
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHH--HHH
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSAL--LAI 234 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~--ia~ 234 (498)
..|+.++.+++|+|+|+ +++++| .+++|....... . -.| ++.. +..
T Consensus 27 ~~L~~~a~~~al~~a~l---~~~~Id----~vi~G~~~~~~~----------------------~--~~~-~ar~~~l~~ 74 (390)
T PRK06504 27 ADLAAQVLDALVDRSGA---DPALIE----DVIMGCVSQVGE----------------------Q--ATN-VARNAVLAS 74 (390)
T ss_pred HHHHHHHHHHHHHHcCC---CHHHCC----EEEEEecccccc----------------------c--ccc-HHHHHHHHc
Confidence 47999999999999999 445566 577775421000 0 001 1111 112
Q ss_pred hhcCCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hhhH----------------------------
Q 010896 235 DTGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PTGV---------------------------- 285 (498)
Q Consensus 235 ~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~~~---------------------------- 285 (498)
-|+..-|.++|+.+|+||+.|+..|++.|++|++|++||||+|.+.. |...
T Consensus 75 gl~~~vP~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvLagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (390)
T PRK06504 75 KLPESVPGTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMGSPSTLPAKNGLGHYKSPGMEERYPGIQFS 154 (390)
T ss_pred CCCCCCceEEEechhhHHHHHHHHHHHHHHCCCCCEEEEeeeeecCCCccccccccccccccccccccccccccCCCCCC
Confidence 23333499999999999999999999999999999999999997532 2100
Q ss_pred HHHhhccccccCC------------------------------------------------CCCC--------CCCCcCC
Q 010896 286 GGFIACRALSQRN------------------------------------------------EYPK--------RASRPWD 309 (498)
Q Consensus 286 ~~~~~~~~ls~~~------------------------------------------------~~p~--------~~~rpfd 309 (498)
..+........++ +.+. ...+|..
T Consensus 155 ~~~aae~~a~~ygisre~~d~~A~ksh~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~~De~~r~~~t~e~l~~~~~~~ 234 (390)
T PRK06504 155 QFTGAEMMAKKYGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRADGSGEMHTVDEGIRFDATLEGIAGVKLIA 234 (390)
T ss_pred HHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHhHHcCCCccccccccccCCCCCceEEccCCCCCCCCCHHHHhcCCCCC
Confidence 0000000000000 0000 0112331
Q ss_pred C-----CCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcC
Q 010896 310 K-----DRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVN 384 (498)
Q Consensus 310 ~-----~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId 384 (498)
. ..|...++|||+++||.+++.|++.+.++.++|.++....+. +.....+...+++++|+++|++++|||
T Consensus 235 ~~g~lt~~n~s~~~DGAaA~vl~s~~~A~~l~~~p~~~i~~~~~~~~~-----~~~~~~~~~~a~~~a~~~agl~~~Did 309 (390)
T PRK06504 235 EGGRLTAATASQICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGD-----PVIMLEAPLPATERALKKAGMKIDDID 309 (390)
T ss_pred CCCCCcCccCCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEeecC-----chhhhccHHHHHHHHHHHcCCCHHHCC
Confidence 1 123444789999999999999999888887788887765431 111233446799999999999999999
Q ss_pred EEEccCCCCccCcHHHHHHHHHHhc-CCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcC
Q 010896 385 YVNAHATSTLAGDLAEVNAIKKVFK-DTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTID 463 (498)
Q Consensus 385 ~i~~hgtgt~~~D~~E~~al~~~f~-~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~ 463 (498)
++|.|...+.. |...++ .|+ ...++++++....+||+.+|+|+..+...+.+|+..
T Consensus 310 ~~Ei~d~Fa~~----~l~~~e-~lG~~~~pvN~~GG~la~Ghp~gatG~r~~~~l~~~lr~~------------------ 366 (390)
T PRK06504 310 LYEVNEAFASV----PLAWLK-ATGADPERLNVNGGAIALGHPLGASGTKLMTTLVHALKQR------------------ 366 (390)
T ss_pred EEEecccchHH----HHHHHH-HhCCCCCCcCCCCcHHhcCCCcchhHHHHHHHHHHHHHhh------------------
Confidence 99999665543 333333 333 234788999999999999999999999999999751
Q ss_pred cCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 464 TVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 464 ~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
+.++.+.+++|.||..+++||++
T Consensus 367 ---------~~~~gl~~~~~ggg~g~a~ile~ 389 (390)
T PRK06504 367 ---------GKRYGLQTMCEGGGMANVTIVER 389 (390)
T ss_pred ---------CCCeEEEEEeecccceeEEEEEe
Confidence 23578888888888999999886
|
|
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.9e-22 Score=205.14 Aligned_cols=274 Identities=20% Similarity=0.331 Sum_probs=187.3
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.+++++||+|+|+ +++++| +|++|+.... .. . ...+..++..+
T Consensus 28 ~~L~~~A~~~Al~dAgl---~~~dID----~vi~g~~~~~------------------------~~-~-~~~a~~v~~~l 74 (426)
T PRK08170 28 SDLAVAAGRALLNRQPF---APDDLD----EVILGCAMPS------------------------PD-E-ANIARVVALRL 74 (426)
T ss_pred HHHHHHHHHHHHHHcCC---CHHHCC----EEEEEeccCC------------------------CC-c-ChHHHHHHHHh
Confidence 47999999999999999 445666 6888864210 00 0 12345677889
Q ss_pred cCCC--CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hh---h------------------H-------
Q 010896 237 GLMG--PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PT---G------------------V------- 285 (498)
Q Consensus 237 gl~G--p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~---~------------------~------- 285 (498)
|+.. |.++|+++|+|++.+|..|+++|++|++|.+||+|+|.+.. |. . +
T Consensus 75 Gl~~~~p~~~v~~~CaSg~~al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (426)
T PRK08170 75 GCGEKVPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLR 154 (426)
T ss_pred CcCCCceeeeccchhhHHHHHHHHHHHHHHCCCCCEEEEEEEecccCCccccccccccchhccccccccCcccccccccc
Confidence 9953 89999999999999999999999999999999999995321 10 0 0
Q ss_pred HHH-----------h------hcc-----cc----------------ccCC--C------------------CC------
Q 010896 286 GGF-----------I------ACR-----AL----------------SQRN--E------------------YP------ 301 (498)
Q Consensus 286 ~~~-----------~------~~~-----~l----------------s~~~--~------------------~p------ 301 (498)
..+ . .+. .+ +..+ . .|
T Consensus 155 ~~~~~~~~~~~~g~~~~~~~~~~a~~a~~~~~~ygitre~~a~vav~s~~~a~~A~~~g~~~~i~pv~~~~~np~a~de~ 234 (426)
T PRK08170 155 PSYLAPVIGLLRGLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLKEVVPLFDRDGKFYDHDDG 234 (426)
T ss_pred ccccccccccCccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcceEeeeecCCCCeeccCCC
Confidence 000 0 000 00 0000 0 00
Q ss_pred -CC--------CCCcC-CCC------CCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHH
Q 010896 302 -KR--------ASRPW-DKD------RDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGV 365 (498)
Q Consensus 302 -~~--------~~rpf-d~~------~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~ 365 (498)
.. ..+|. +.. .|...++|||+++||++++.|++.+.++.++|.+++.... .|...+.+.
T Consensus 235 ~r~~~t~e~~~~~~~v~~~p~~~lt~~~~s~~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~~~~~-----~~~~~~~~~ 309 (426)
T PRK08170 235 VRPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQWAAL-----DPSQMGLGP 309 (426)
T ss_pred CCCCCCHHHHhcCCCcccCCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEeeEeee-----CchhhcccH
Confidence 00 11111 100 3445578999999999999999999898889999877643 222233345
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHH-h-----------c--CCCcccccccccccCCcchhhh
Q 010896 366 SSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKV-F-----------K--DTSEMKMNGTKSMIGHGLGAAG 431 (498)
Q Consensus 366 ~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~-f-----------~--~~~~~~v~s~K~~~Gh~~~AaG 431 (498)
..+++++|+++||+++|||++|.|...+.. .....+.+... | + +..++++++.-..+||+.||+|
T Consensus 310 ~~a~~~al~~aGl~~~did~~ei~daFa~~-~l~~l~~le~lGf~~~G~g~~~~~G~~~~~pvN~~GG~la~GHP~GAtG 388 (426)
T PRK08170 310 VHAATPLLQRHGLTLEDLDLWEINEAFAAQ-VLACLAAWADEEYCREQLGLDGALGELDRERLNVDGGAIALGHPVGASG 388 (426)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEecchhHHH-HHHHHHHhccccchhcccccccccCCCCcceecCCCCHHHhCCCccCcc
Confidence 789999999999999999999999544432 11111111100 0 1 1236777777777899999999
Q ss_pred HHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEeeC
Q 010896 432 GLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 432 ~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
+..+...+.+|+. .+.++++++.+.-||...++||++.
T Consensus 389 ~~~~~~l~~~l~~---------------------------~~~~~g~~~~c~~gg~g~a~~~e~~ 426 (426)
T PRK08170 389 ARIVLHLLHALKR---------------------------RGTKRGIAAICIGGGQGGAMLLERV 426 (426)
T ss_pred HHHHHHHHHHHHh---------------------------hCCCeEEEEEecCCChhheEEEEeC
Confidence 9999999999976 1246889999999999999999863
|
|
| >cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.4e-22 Score=205.35 Aligned_cols=278 Identities=22% Similarity=0.276 Sum_probs=192.3
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+.+++++||+|+|++ ++++| ++++|+..... .....+.+++..
T Consensus 16 ~~eL~~~A~~~Al~dagl~---~~~Id----~vi~g~~~~~~--------------------------~~~~~a~~va~~ 62 (375)
T cd00829 16 PLELAAEAARAALDDAGLE---PADID----AVVVGNAAGGR--------------------------FQSFPGALIAEY 62 (375)
T ss_pred HHHHHHHHHHHHHHHcCCC---HHHCC----EEEEecccccc--------------------------cccchHHHHHHH
Confidence 3589999999999999994 34455 67777632110 012345678888
Q ss_pred hcCC-CCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhh------------H--------------HHH
Q 010896 236 TGLM-GPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTG------------V--------------GGF 288 (498)
Q Consensus 236 lgl~-Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~------------~--------------~~~ 288 (498)
+|+. .|.++++.+|+|++.+|..|+++|++|++|.+||+|+|.+..... + +.+
T Consensus 63 lGl~~~~~~~v~~~c~sg~~al~~Aa~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 142 (375)
T cd00829 63 LGLLGKPATRVEAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYAL 142 (375)
T ss_pred cCCCCcceeeEeCccHHHHHHHHHHHHHHHhCCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCCChHHHHHH
Confidence 9984 488999999999999999999999999999999999996432110 0 000
Q ss_pred hhccccccC------------------CCCCCC----------------CCCcCCCCCCCccccceeEEEEEcchHHHHh
Q 010896 289 IACRALSQR------------------NEYPKR----------------ASRPWDKDRDGFVMGEGCGILVMESLEHAMK 334 (498)
Q Consensus 289 ~~~~~ls~~------------------~~~p~~----------------~~rpfd~~~~G~v~gEGaaavvLe~~~~A~~ 334 (498)
.....+..+ ...|.. .+.|+.. .+...++||++++||++++.|++
T Consensus 143 ~a~~~~~~~g~t~e~~~~va~~~~~~A~~np~A~~~~~~t~d~~~~~~~i~~pl~~-~~~~~~~DGaaa~vl~s~~~a~~ 221 (375)
T cd00829 143 AARRYMHRYGTTREDLAKVAVKNHRNAARNPYAQFRKPITVEDVLNSRMIADPLRL-LDCCPVSDGAAAVVLASEERARE 221 (375)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCCch-hhcCCCCCceeEEEEecHHHHhh
Confidence 000000000 000111 1123333 45667899999999999999998
Q ss_pred cCCcEEEEEEeEEEecCCCCCCCCCC--ChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC--
Q 010896 335 RGANIIAEYLGGAVTCDAHHMTDPRS--DGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-- 410 (498)
Q Consensus 335 ~g~~i~a~I~g~~~~~dg~~~~~p~~--~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-- 410 (498)
. .+++++|+|++...+..+...... ...+...+++++|++|||+++|||++|.|.+.+.. ..+..++|.-.-.+
T Consensus 222 ~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~d~F~~~-~l~~~e~lGl~~~g~~ 299 (375)
T cd00829 222 L-TDRPVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELYDCFTIA-ELLALEDLGFCEKGEG 299 (375)
T ss_pred c-CCCCeEEEEEEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH-HHHHHHHcCCCCCCch
Confidence 8 677899999999988765544332 56777899999999999999999999999988765 44444443210000
Q ss_pred -------------CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEE
Q 010896 411 -------------TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVA 477 (498)
Q Consensus 411 -------------~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~a 477 (498)
..++++++.-...||+.+++|+..++.++++|+...= ..|..+.+++
T Consensus 300 ~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qlrg~ag--------------------~~qv~~~~~~ 359 (375)
T cd00829 300 GKLVREGDTAIGGDLPVNTSGGLLSKGHPLGATGLAQAVEAVRQLRGEAG--------------------ARQVPGARVG 359 (375)
T ss_pred HHHHHCCCccCCCCccccCCCchhcCCCCccHHHHHHHHHHHHHhcCCcc--------------------cccCCCccEE
Confidence 1156666666667999999999999999999987421 1122246788
Q ss_pred EEEcccccccee
Q 010896 478 ISNSFGFGGHNS 489 (498)
Q Consensus 478 lv~s~G~gG~n~ 489 (498)
++++.|-.+++.
T Consensus 360 l~~~~gg~~~~~ 371 (375)
T cd00829 360 LAHNIGGTGSAA 371 (375)
T ss_pred EEecCCCccceE
Confidence 888876444433
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. |
| >PTZ00455 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.9e-21 Score=201.38 Aligned_cols=285 Identities=20% Similarity=0.213 Sum_probs=185.5
Q ss_pred HHHHHHHHHHHHHHCCCCcccccc--cCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHH-
Q 010896 157 WRYCLVAGRRALEEASLSPQVLEN--MDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLA- 233 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~--~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia- 233 (498)
..|+.+++++||+|+|++ +++ +| +|++|...+... .. ..| ++..+.
T Consensus 49 ~eL~~~a~~~al~~agl~---~~d~~ID----~vi~G~~~~~~~----------------------~~-~~~-~a~~~~~ 97 (438)
T PTZ00455 49 EELLATAIQGTLENTGLD---GKAALVD----KVVVGNFLGELF----------------------SS-QGH-LGPAAVG 97 (438)
T ss_pred HHHHHHHHHHHHHHcCCC---HHHCCcC----EEEEEecccccc----------------------cc-ccc-hHHHHHH
Confidence 479999999999999994 445 66 677776422110 00 000 111122
Q ss_pred ------HhhcCCC-CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchh-----------------------
Q 010896 234 ------IDTGLMG-PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPT----------------------- 283 (498)
Q Consensus 234 ------~~lgl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~----------------------- 283 (498)
..+|+.+ |.++|+++|+|++.||..|+++|++|++|++||+|+|.+....
T Consensus 98 ~~gl~~~~~gl~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (438)
T PTZ00455 98 SLGQSGASNALLYKPAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSARVGGDYLARAADYRRQRKLDDF 177 (438)
T ss_pred hccCcccccccCCCceeEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcchhhhhhccchhhccccccccCc
Confidence 3456654 8999999999999999999999999999999999999642210
Q ss_pred hHHH-Hhh-ccccccCC-------------------CCCCCCC--CcCC------------------------CCCCCcc
Q 010896 284 GVGG-FIA-CRALSQRN-------------------EYPKRAS--RPWD------------------------KDRDGFV 316 (498)
Q Consensus 284 ~~~~-~~~-~~~ls~~~-------------------~~p~~~~--rpfd------------------------~~~~G~v 316 (498)
.+.. |.. +..+..++ ..|.... +|.+ ...|...
T Consensus 178 ~~~~~~a~~~~ym~~~ggitrE~la~vAvka~~~a~~nP~A~~~~~~~t~~~~~d~~~~~~e~l~s~~i~~pl~~~d~s~ 257 (438)
T PTZ00455 178 TFPCLFAKRMKYIQEHGHFTMEDTARVAAKAYANGNKNPLAHMHTRKLSLEFCTGASDKNPKFLGNETYKPFLRMTDCSQ 257 (438)
T ss_pred chHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHhcCCHhhccCCCCCceeeccccccchhhhcCCcccCcCchhcCCC
Confidence 0000 110 11111111 0121110 1111 1223344
Q ss_pred ccceeEEEEEcchHHHHhcCCcE----EEEEEeEEEecCCCCCCCC---CCChHHHHHHHHHHHHHcCCCCCCcCEEEcc
Q 010896 317 MGEGCGILVMESLEHAMKRGANI----IAEYLGGAVTCDAHHMTDP---RSDGLGVSSCIAKSLEDAGVSPEEVNYVNAH 389 (498)
Q Consensus 317 ~gEGaaavvLe~~~~A~~~g~~i----~a~I~g~~~~~dg~~~~~p---~~~~~~~~~~i~~Al~~Agl~~~dId~i~~h 389 (498)
++|||+++||.+++.|++.+.++ .++|+|++...+.... .| ...+.. ..+++++|+++|++++|||++|.|
T Consensus 258 ~sDGAaA~vl~See~A~~l~~~p~~~~~v~i~g~~~~~~~~~~-~~~~~~~~~~~-~~A~~~a~~~AGl~~~DiD~~Ei~ 335 (438)
T PTZ00455 258 VSDGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYE-DPPDATRMFTS-RAAAQKALSMAGVKPSDLQVAEVH 335 (438)
T ss_pred ccccceEEEEecHHHHHhcCCCCCCCccEEEEEEEEecCCccc-CccccccchHH-HHHHHHHHHHcCCCHHHCcEeeec
Confidence 68999999999999999988776 6899999988763321 22 222333 689999999999999999999999
Q ss_pred CCCCccCcHHHHHHHHHH--------h-------cCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCC
Q 010896 390 ATSTLAGDLAEVNAIKKV--------F-------KDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQD 454 (498)
Q Consensus 390 gtgt~~~D~~E~~al~~~--------f-------~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~ 454 (498)
...+.. ..+..+.|.-. + ++..++++++.-..+||+.||+|+..++.++++|+..--
T Consensus 336 daFa~~-~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~GHP~gAtG~~~v~e~~~QLrg~ag------- 407 (438)
T PTZ00455 336 DCFTIA-ELLMYEALGIAEYGHAKDLIRNGATALEGRIPVNTGGGLLSFGHPVGATGVKQIMEVYRQMKGQCG------- 407 (438)
T ss_pred ccChHH-HHHHHHHcCCCCCCchHHHHhcCCcccCCCceeeCCCchhhcCCCcchHHHHHHHHHHHHHhhccc-------
Confidence 776554 22222332100 0 012467777888888999999999999999999986321
Q ss_pred CCCCCCCcCcCCCcccccC-ccEEEEEccc-cccceeeEEEee
Q 010896 455 NLEPEVTIDTVPNVKKQHH-VNVAISNSFG-FGGHNSVVVFAP 495 (498)
Q Consensus 455 ~~~~~~~~~~v~~~~~~~~-~~~alv~s~G-~gG~n~~~vl~~ 495 (498)
..|..+ .+++++.+.| +++++...||+.
T Consensus 408 -------------~~Qv~~~~~~gl~~~~Gg~~~~~~~~vl~~ 437 (438)
T PTZ00455 408 -------------EYQMKNIPALGATLNMGGDDKTAVSTVLQN 437 (438)
T ss_pred -------------cCCCCCcccEEEEeccCCCcceEEEEEEec
Confidence 112223 4788888877 666677777753
|
|
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.2e-21 Score=196.93 Aligned_cols=288 Identities=17% Similarity=0.148 Sum_probs=188.4
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.+|+++||+|||+ +++++| ++++++. .. .+.+. ...+..++..|
T Consensus 25 ~eL~~eAa~~Al~dAgl---~~~dID----~iv~~~~-~~----------------------~~~~~--~~~~~~va~~L 72 (386)
T PRK08313 25 AGLVREAIDRALADAGL---TWDDID----AVVVGKA-PD----------------------FFEGV--MMPELFLADAL 72 (386)
T ss_pred HHHHHHHHHHHHHHcCC---CHHHCC----EEEEecc-cc----------------------ccccc--cCchHHHHHhc
Confidence 47999999999999999 455666 6777652 10 00010 01224688899
Q ss_pred cCCC-CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccch---------------hh-----HHHH------h
Q 010896 237 GLMG-PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIP---------------TG-----VGGF------I 289 (498)
Q Consensus 237 gl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p---------------~~-----~~~~------~ 289 (498)
|+++ |.+.|+++|+++..++..|++.|++|++|.+||.|+|..... .. +..+ .
T Consensus 73 Gl~~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~ym~ 152 (386)
T PRK08313 73 GATGKPLIRVHTAGSVGGSTAVVAASLVQSGVYRRVLAVAWEKQSESNAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIR 152 (386)
T ss_pred CCCCCceEEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEccCCccccccccccccccccccchHHHHHHHHHHHHH
Confidence 9976 788999999999999999999999999999999998853211 00 0000 0
Q ss_pred hccccc----c--------CCCCCCCCCC-c-CC--------------CCCCCccccceeEEEEEcchHHHHhcCCcEEE
Q 010896 290 ACRALS----Q--------RNEYPKRASR-P-WD--------------KDRDGFVMGEGCGILVMESLEHAMKRGANIIA 341 (498)
Q Consensus 290 ~~~~ls----~--------~~~~p~~~~r-p-fd--------------~~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a 341 (498)
..+... . ...+|....| | ++ ..-+...++|||+++||.+.+.|++.+.++.+
T Consensus 153 ~~G~~~e~la~vav~~~~~A~~NP~A~~r~~~~t~e~v~~s~~ia~Pl~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~ 232 (386)
T PRK08313 153 RSGAPEHIGAMVAVKDRLNGAKNPYAHLHQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVIGDEEAADAAAGRPVA 232 (386)
T ss_pred HHCcCHHHHHHHHHHHHHHHccCcHHhcCCCCCCHHHHhcCCcccCCCchhccCCCCCceEEEEEecHHHHHhcCCCCCe
Confidence 000000 0 0011211111 1 11 11345557999999999999999988777788
Q ss_pred EEEeEEEecCCCCCCC-CCCChHHHHHHHHHHHHHcCCC--CCCcCEEEccCCCCccCcHHHHHHHH--------HHhcC
Q 010896 342 EYLGGAVTCDAHHMTD-PRSDGLGVSSCIAKSLEDAGVS--PEEVNYVNAHATSTLAGDLAEVNAIK--------KVFKD 410 (498)
Q Consensus 342 ~I~g~~~~~dg~~~~~-p~~~~~~~~~~i~~Al~~Agl~--~~dId~i~~hgtgt~~~D~~E~~al~--------~~f~~ 410 (498)
+|+|++...|...... +.....+...++++||++||++ ++|||++|.|.+.|.. ..+..++|- +.+.+
T Consensus 233 ~I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~p~~Did~~el~d~F~~~-~~~~~e~lGl~~~G~~~~~~~~ 311 (386)
T PRK08313 233 WIHGTAMRTEPLAFAGRDQVNPQAGRDAAAALWKAAGITDPRDEIDVAEIYVPFSWF-EPMWLENLGFAPEGEGWKLTEA 311 (386)
T ss_pred EEEEEEEEecCcccccccccccHHHHHHHHHHHHHcCCCCChhhCCEEEeccCChHH-HHHHHHHcCCCCCCchHHHHHC
Confidence 9999998766543221 2233456678999999999998 6999999999887664 222222221 01110
Q ss_pred -----CC--cccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccc
Q 010896 411 -----TS--EMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFG 483 (498)
Q Consensus 411 -----~~--~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G 483 (498)
.. +++.++.-.. ||+.||+|+.+++.+++||+... ...|..+.+++++++.|
T Consensus 312 G~~~~~G~~pvN~~GG~l~-g~p~gatG~~~~~e~~~qlrG~a--------------------g~rQv~~a~~~l~~~~G 370 (386)
T PRK08313 312 GETAIGGRLPVNPSGGVLS-SNPIGASGMIRFAEAALQVMGKA--------------------GEHQVDGARKALGHAYG 370 (386)
T ss_pred CCcCCCCCccccCCCcccc-cCCCcHHHHHHHHHHHHHhcccc--------------------cCCcCCCccEEEEeccC
Confidence 12 3444444333 99999999999999999998843 11233456789999886
Q ss_pred -cccceeeEEEeeCCC
Q 010896 484 -FGGHNSVVVFAPFSP 498 (498)
Q Consensus 484 -~gG~n~~~vl~~~~~ 498 (498)
.+...+.+||+.-+|
T Consensus 371 g~~~~~~~~v~~~~~~ 386 (386)
T PRK08313 371 GGSQFFSMWVVGSEKP 386 (386)
T ss_pred CcceEEEEEEEecCCC
Confidence 445556667676554
|
|
| >PRK08256 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.5e-21 Score=199.36 Aligned_cols=280 Identities=20% Similarity=0.282 Sum_probs=184.1
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
..+|+.+++++||+|||++ ++++|...+|.+++.... ...+...
T Consensus 22 ~~~La~~A~~~Al~dAGl~---~~dID~~~~g~~~~~~~~---------------------------------~~~~~~~ 65 (391)
T PRK08256 22 YPDMAAEAGRAALADAGID---YDAVQQAYVGYVYGDSTS---------------------------------GQRALYE 65 (391)
T ss_pred HHHHHHHHHHHHHHHcCCC---hHHCCeeEEEEEeCCcch---------------------------------hHHHHHH
Confidence 3589999999999999994 445664333333321100 0023446
Q ss_pred hcCCC-CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hhh---------HHHHh---------------
Q 010896 236 TGLMG-PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PTG---------VGGFI--------------- 289 (498)
Q Consensus 236 lgl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~~---------~~~~~--------------- 289 (498)
+|+++ |.++|+++|+|++.||..|+++|++|++|.+||+|+|.+.. +.. +..+.
T Consensus 66 lGl~~~~~~~v~~~caSg~~ai~~A~~~I~sG~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (391)
T PRK08256 66 VGMTGIPIVNVNNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFDPAPPA 145 (391)
T ss_pred cCCCCCCCcccccccHHHHHHHHHHHHHHHCCCCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccccCCcc
Confidence 89988 99999999999999999999999999999999999997421 100 00000
Q ss_pred --hcc-----ccccC------------------CCCCCCCC----------------CcCCCCCCCccccceeEEEEEcc
Q 010896 290 --ACR-----ALSQR------------------NEYPKRAS----------------RPWDKDRDGFVMGEGCGILVMES 328 (498)
Q Consensus 290 --~~~-----~ls~~------------------~~~p~~~~----------------rpfd~~~~G~v~gEGaaavvLe~ 328 (498)
.+. .+..+ ...|.... .|+.. -|...++||++++||.+
T Consensus 146 ~~~~a~~a~~y~~~~G~t~e~~a~vav~~~~~A~~np~A~~~~~~t~e~~~~s~~i~~Pl~~-~d~~~~~DGAaA~il~s 224 (391)
T PRK08256 146 LRMFGGAGREHMEKYGTTAETFAKIGVKARRHAANNPYAQFRDEYTLEDVLASPMIWGPLTR-LQCCPPTCGAAAAIVCS 224 (391)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChhhcCCCCCHHHHhcCCcccCCCcH-hhcCCCCCCeEEEEEec
Confidence 000 00000 00111000 11111 23344789999999999
Q ss_pred hHHHHhcCCcEEEEEEeEEEecCCCCCCCC-C---C-ChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHH
Q 010896 329 LEHAMKRGANIIAEYLGGAVTCDAHHMTDP-R---S-DGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNA 403 (498)
Q Consensus 329 ~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p-~---~-~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~a 403 (498)
.+.|++.+.+++++|+|++...+....... + . .......+.+++|+++|++++|||++|+|.+.+.. ..+..++
T Consensus 225 ~~~a~~~~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ag~~~~DiD~~ei~d~f~~~-~l~~le~ 303 (391)
T PRK08256 225 EEFARKHGLDRAVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVYEQAGIGPEDIDVVELHDCFSAN-ELLTYEA 303 (391)
T ss_pred HHHHHhcCCCCCEEEEEEEEeccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEeeccCCcHH-HHHHHHH
Confidence 999998876778999998877653322111 1 1 12244679999999999999999999999877654 2333333
Q ss_pred HHHHhcC-----------------CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCC
Q 010896 404 IKKVFKD-----------------TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVP 466 (498)
Q Consensus 404 l~~~f~~-----------------~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~ 466 (498)
|. |.. ..+++.++.-...||+.+|+|+..++.+++||+...
T Consensus 304 lg--~~~~Ge~~~~~~~G~~~~~G~~pvN~~GG~ls~Ghp~gasG~~~~~e~~~QL~g~a-------------------- 361 (391)
T PRK08256 304 LG--LCPEGEAEKFIDDGDNTYGGRWVVNPSGGLLSKGHPLGATGLAQCAELTWQLRGTA-------------------- 361 (391)
T ss_pred cC--CCCCCchHHHHHCCCccCCCCeeeCCCCccccCCCCccHHHHHHHHHHHHHhcCCc--------------------
Confidence 21 111 125666666777799999999999999999998742
Q ss_pred CcccccCccEEEEEccccccceeeEEEee
Q 010896 467 NVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 467 ~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
...|..+.+++++++.|.+.++...||++
T Consensus 362 g~~Qv~~~~~~l~~~~G~~~~~~~~v~~~ 390 (391)
T PRK08256 362 GARQVEGARLALQHNLGLGGACVVTLYQR 390 (391)
T ss_pred CCCcCCccceEEEeccccceeEEEEEEec
Confidence 11223345789999999655566666654
|
|
| >TIGR02446 FadI fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.1e-21 Score=199.59 Aligned_cols=274 Identities=19% Similarity=0.266 Sum_probs=180.2
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.+++++||+|+|++ ++.+| .|++|...+.. ....++..++...
T Consensus 32 ~~L~~~a~~~al~~agl~---~~~Id----~vi~G~~~~~~--------------------------~~~~~ar~~~l~a 78 (430)
T TIGR02446 32 VDLGKMVVSELLARSEID---PKLIE----QLVFGQVVQMP--------------------------EAPNIAREIVLGT 78 (430)
T ss_pred HHHHHHHHHHHHHHcCCC---HHHCC----EEEEEeccCcC--------------------------ccchHHHHHHHhC
Confidence 479999999999999994 45565 47887532100 0112344455556
Q ss_pred cCC-C-CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hhhHH----------------H----------
Q 010896 237 GLM-G-PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PTGVG----------------G---------- 287 (498)
Q Consensus 237 gl~-G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~~~~----------------~---------- 287 (498)
|+. + |.++|+.+|+||+.|+..|+++|++|++|++||||+|.+.. |..+. .
T Consensus 79 Gl~~~~p~~~V~~~CaSG~~A~~~a~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (430)
T TIGR02446 79 GMNVHTDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLG 158 (430)
T ss_pred CCCCCCchhhhhhhhhHHHHHHHHHHHHHHCCCCCEEEEeeeEcccCCcccccccccccccccccccccCccccccccch
Confidence 886 4 89999999999999999999999999999999999998632 21000 0
Q ss_pred ----H--h----------hccc----c-ccC------------------C----------------CCCCCCC-------
Q 010896 288 ----F--I----------ACRA----L-SQR------------------N----------------EYPKRAS------- 305 (498)
Q Consensus 288 ----~--~----------~~~~----l-s~~------------------~----------------~~p~~~~------- 305 (498)
+ . .++. + ..+ . ..|....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~a~~A~~~g~~~~ei~p~~~np~a~~~~~D~~~ 238 (430)
T TIGR02446 159 LKDLMPVPPAVAEYSTGLSMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPPYKQWIAEDNNI 238 (430)
T ss_pred hhhhcccCcccccccCCCcHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceeeeeeecCCceEecccCCC
Confidence 0 0 0000 0 000 0 0010000
Q ss_pred C------------c-CC------CCCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHH
Q 010896 306 R------------P-WD------KDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVS 366 (498)
Q Consensus 306 r------------p-fd------~~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~ 366 (498)
| | |+ ...+...++|||+++||.+++.|++.+.++.++|++++....... .. ......
T Consensus 239 r~~~t~e~~~~~~~i~~p~~g~lt~~~~~~~~DGAaA~il~se~~A~~l~~~p~~~i~~~~~~~~~~~-~~---~~~~~~ 314 (430)
T TIGR02446 239 RHNSTLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDVW-QD---MLMGPS 314 (430)
T ss_pred CCCCCHHHHhcCCceecCCCCceechhcCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEeeccCch-Hh---hcccHH
Confidence 1 1 11 122344568999999999999999988888889999886632110 00 122235
Q ss_pred HHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHH------H---Hh---cC--CCcccccccccccCCcchhhhH
Q 010896 367 SCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIK------K---VF---KD--TSEMKMNGTKSMIGHGLGAAGG 432 (498)
Q Consensus 367 ~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~------~---~f---~~--~~~~~v~s~K~~~Gh~~~AaG~ 432 (498)
.+++++|++|||+++|||++|.|...+.. .....++|. + .+ +. ..++++++.-...||+.||+|+
T Consensus 315 ~a~~~al~~Agl~~~Did~~Ei~daFa~~-~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gatG~ 393 (430)
T TIGR02446 315 YATPLALQRAGLALSDLTLIDMHEAFAAQ-TLANVQMFASDKFAQENLGRSKAMGEIDMSKFNVLGGSIAYGHPFAATGA 393 (430)
T ss_pred HHHHHHHHHcCCCHHHCCEEEeccccHHH-HHHHHHHhcCcchhhhcccccccCCCCCCCccCCCCCHHhcCCCccccHH
Confidence 78999999999999999999999766553 223333331 0 00 11 1267777777888999999999
Q ss_pred HHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 433 LEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 433 ~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
..++.++.+|+..- .++.+....+.||...++|++.
T Consensus 394 ~~v~e~~~qL~g~a---------------------------g~~g~~~~~~~GG~g~a~iie~ 429 (430)
T TIGR02446 394 RMITQTLRELKRRG---------------------------GGLGLNTACAAGGLGAAMILEV 429 (430)
T ss_pred HHHHHHHHHHhhcC---------------------------CCccEEEEEecCcceEEEEEEe
Confidence 99999999998621 0123455666777778888874
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli. |
| >PRK06025 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.3e-21 Score=196.30 Aligned_cols=267 Identities=19% Similarity=0.267 Sum_probs=188.4
Q ss_pred HHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhc
Q 010896 158 RYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTG 237 (498)
Q Consensus 158 ~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lg 237 (498)
.|+..+.+++|+++|+++ +.+| -|++|...... .....++-.++...|
T Consensus 31 ~L~~~~~~~~l~r~~i~~---~~id----~vi~G~~~~~g-------------------------~~g~n~aR~~al~ag 78 (417)
T PRK06025 31 HLAATVLKALAERNGLNT---ADVD----DIIWSTSSQRG-------------------------KQGGDLGRMAALDAG 78 (417)
T ss_pred HHHHHHHHHHHHhcCCCH---HHCC----EEEEEcCCCcC-------------------------cccCcHHHHHHHhCC
Confidence 688889999999999944 4555 47777642110 000113334444455
Q ss_pred C--CCCccccccccchHHHHHHHHHHHHHcCCCcEEEEecccccc-chhhHH-----H----------------Hh--hc
Q 010896 238 L--MGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAI-IPTGVG-----G----------------FI--AC 291 (498)
Q Consensus 238 l--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~-~p~~~~-----~----------------~~--~~ 291 (498)
| +=|.+||+..|+||+.||.+|++.|+.|++|++|+||+|.+. .|+.+. + +. .|
T Consensus 79 lp~~vp~~tvnr~C~Sgl~ai~~aa~~I~~G~~~~~laGG~EsmS~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~M 158 (417)
T PRK06025 79 YDIKASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAAEDMAAGKPPLGMGSGNLRLRALHPQSHQ 158 (417)
T ss_pred CCCCCCeeeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCcccccccccCCCCcccccccCcccccccCCCCH
Confidence 5 349999999999999999999999999999999999999854 221000 0 00 00
Q ss_pred c-----------------------------------cc-------c--------cCCCCCCC--------CCCc-CCC--
Q 010896 292 R-----------------------------------AL-------S--------QRNEYPKR--------ASRP-WDK-- 310 (498)
Q Consensus 292 ~-----------------------------------~l-------s--------~~~~~p~~--------~~rp-fd~-- 310 (498)
+ .+ . .+++.|.. +.+| |+.
T Consensus 159 g~~ae~~a~~~~isRe~~D~~A~~Sh~rA~~A~~~G~f~~eIvPv~~~~~~~~~~~De~~R~~~t~e~la~L~p~F~~~~ 238 (417)
T PRK06025 159 GVCGDAIATMEGITREALDALGLESQRRAARAIKEGRFDKSLVPVYRDDGSVALDHEEFPRPQTTAEGLAALKPAFTAIA 238 (417)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEeeEEcCCCCEEecCCCCCCCCCCHHHHcCCCCCccccc
Confidence 0 00 0 01111110 1133 331
Q ss_pred ----CCCCc-------------------------cccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCC
Q 010896 311 ----DRDGF-------------------------VMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSD 361 (498)
Q Consensus 311 ----~~~G~-------------------------v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~ 361 (498)
..+|. .++|||+++||++++.|+++|.+++++|.|++...+.. ...
T Consensus 239 ~~~~~~~g~~~~~~~~~~~~~~~~~~~vTagNss~~sDGAAAvVL~See~A~~lg~~p~a~I~g~~~a~~~p-----~~~ 313 (417)
T PRK06025 239 DYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIVAMANMGDDP-----TLM 313 (417)
T ss_pred cccccCCccccccccccccccccccccccccccCCCCcceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCc-----hhh
Confidence 01343 25899999999999999999999999999999886432 222
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHH--HHhc-CCCcccccccccccCCcchhhhHHHHHHH
Q 010896 362 GLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIK--KVFK-DTSEMKMNGTKSMIGHGLGAAGGLEAITT 438 (498)
Q Consensus 362 ~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~--~~f~-~~~~~~v~s~K~~~Gh~~~AaG~~~li~a 438 (498)
+.+...+++++|+++|++++|||++|.| |.+....+. +.++ ...++++++.+..+||+.|++|+..++.+
T Consensus 314 ~~~p~~Ai~~aL~~AGl~~~DID~~ei~-------eaFa~~~l~~~~~lg~~~~~vN~~GG~ia~GHp~GaTGa~~v~~l 386 (417)
T PRK06025 314 LNAPVPAAKKVLAKAGLTKDDIDLWEIN-------EAFAVVAEKFIRDLDLDRDKVNVNGGAIALGHPIGATGSILIGTV 386 (417)
T ss_pred cccHHHHHHHHHHHcCCCHHHCcEEEEc-------hHHHHHHHHHHHHcCCChhhccccCCHHhcCCchhHHHHHHHHHH
Confidence 3344679999999999999999999999 666554432 3444 23578999999999999999999999999
Q ss_pred HHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 439 IKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 439 ~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
+.+|+.. +.++.++.-++.||...++||++
T Consensus 387 l~qL~~~---------------------------g~~~Gl~~~c~~GG~g~A~lle~ 416 (417)
T PRK06025 387 LDELERR---------------------------GLKRGLVTMCAAGGMAPAIIIER 416 (417)
T ss_pred HHHHHHh---------------------------CCCeEEEEEEeeccceeEEEEEe
Confidence 9999651 13567888889999999999986
|
|
| >PRK09268 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.3e-21 Score=196.10 Aligned_cols=276 Identities=18% Similarity=0.236 Sum_probs=181.3
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh-
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID- 235 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~- 235 (498)
..|+.++++++|+|+|+ +++++| .+++|........ ...+..++..
T Consensus 32 ~eL~~~a~~~al~~agl---~~~~Id----~vv~G~~~~~~~~--------------------------~~~~r~~~l~~ 78 (427)
T PRK09268 32 QDMLTAALDGLVDRFGL---QGERLG----EVVAGAVLKHSRD--------------------------FNLTRECVLGS 78 (427)
T ss_pred HHHHHHHHHHHHHHcCC---CHHHCC----EEEEEecccCCcc--------------------------ccHHHHHHHHc
Confidence 47999999999999999 445566 5788764221000 0012222333
Q ss_pred -hcCCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hhhHH---------------------------
Q 010896 236 -TGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PTGVG--------------------------- 286 (498)
Q Consensus 236 -lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~~~~--------------------------- 286 (498)
++...|.++|+++|+||+.|+..|++.|++|.+|++||||+|.+.. |..+.
T Consensus 79 gl~~~~p~~~V~~~CaSG~~ai~~A~~~I~sG~~d~vlvgG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (427)
T PRK09268 79 ALSPYTPAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLR 158 (427)
T ss_pred CCCCCCceeeeechhhHHHHHHHHHHHHHHCCCCCEEEEeeEEccCCCcccccccccccccccccccccCcccccccccc
Confidence 4446799999999999999999999999999999999999997532 11000
Q ss_pred ---------H----Hh--hcccc-----ccC------------------CC-----------CCC------CCC------
Q 010896 287 ---------G----FI--ACRAL-----SQR------------------NE-----------YPK------RAS------ 305 (498)
Q Consensus 287 ---------~----~~--~~~~l-----s~~------------------~~-----------~p~------~~~------ 305 (498)
. +. .++.+ ..+ .. .|. ...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~A~~A~~~g~~~~einP~~~~~~D~~~r~~~t~ 238 (427)
T PRK09268 159 PKHLAPEIPRNGEPRTGLSMGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFLGLTRDNNLRPDSSL 238 (427)
T ss_pred cccccccCccccccccCCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccCccCcccCCCCCCCCCH
Confidence 0 00 00000 000 00 111 011
Q ss_pred ------CcC-CC-------CCCCccccceeEEEEEcchHHHHhcCCcEEEEE-EeEEEecCCCCCCCCCCChHHHHHHHH
Q 010896 306 ------RPW-DK-------DRDGFVMGEGCGILVMESLEHAMKRGANIIAEY-LGGAVTCDAHHMTDPRSDGLGVSSCIA 370 (498)
Q Consensus 306 ------rpf-d~-------~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I-~g~~~~~dg~~~~~p~~~~~~~~~~i~ 370 (498)
+|. +. ..+...+.|||+++||.+.+.|++.+.++.++| .+.....+... .+.........+++
T Consensus 239 e~l~~~~~v~~p~~~g~lt~~n~~~~~DGAaAvvl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~--~~~~~~~~~~~a~~ 316 (427)
T PRK09268 239 EKLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDFVH--GKEGLLMAPAYAVP 316 (427)
T ss_pred HHHhCCCcccccCCCCceeccccCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEEcCCccc--ccchhhccHHHHHH
Confidence 122 22 123334789999999999999999888887776 55555554321 11112224457999
Q ss_pred HHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHH------------hc--CCCcccccccccccCCcchhhhHHHHH
Q 010896 371 KSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKV------------FK--DTSEMKMNGTKSMIGHGLGAAGGLEAI 436 (498)
Q Consensus 371 ~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~------------f~--~~~~~~v~s~K~~~Gh~~~AaG~~~li 436 (498)
++|++|||+++|||++|.|...+.. -..|...+... .+ +..++++++.-..+||+.+|+|+..++
T Consensus 317 ~a~~~AGl~~~Did~~Ei~d~Fa~~-~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~GG~la~GhP~gATG~~~v~ 395 (427)
T PRK09268 317 RLLARNGLTLQDFDFYEIHEAFASQ-VLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAATGGRIVA 395 (427)
T ss_pred HHHHHcCCCHHHCCEEEeccccHHH-HHHHHHHhhhccccccccccccccCcCCCcccCCCcCHHhcCCCcccchHHHHH
Confidence 9999999999999999999665543 22233222100 01 123566666666779999999999999
Q ss_pred HHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 437 TTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 437 ~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
.++++|+.. ..++.+++.+.-||.-.++||++
T Consensus 396 e~~~QL~~~---------------------------~~~~gl~~~c~~gG~g~a~~~e~ 427 (427)
T PRK09268 396 TLAKLLAEK---------------------------GSGRGLISICAAGGQGVTAILER 427 (427)
T ss_pred HHHHHHHhc---------------------------CCCEEEEEEcccCchheEEEEeC
Confidence 999999761 23689999999999999999974
|
|
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.8e-20 Score=193.03 Aligned_cols=282 Identities=17% Similarity=0.157 Sum_probs=181.9
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.+++++||+|+|+ +++++| ++++|+...... .. .....++..+
T Consensus 28 ~~L~~ea~~~AL~dagl---~~~dID----~v~vg~~~~~~~----------------------~~----~~~~~~a~~l 74 (398)
T PRK06157 28 EDLMVEAFLEALADAGI---EPKDID----AAWFGTHYDEIG----------------------SG----KSGTPLSRAL 74 (398)
T ss_pred HHHHHHHHHHHHHHcCC---CHHHCC----EEEEEecccccc----------------------cc----chhHHHHHHc
Confidence 47999999999999999 445666 688886321000 00 0113466678
Q ss_pred cCCC-CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hh----------------------hHHHHhhcc
Q 010896 237 GLMG-PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PT----------------------GVGGFIACR 292 (498)
Q Consensus 237 gl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~----------------------~~~~~~~~~ 292 (498)
|+.+ |.++|+.+|+|++.||+.|+..|++|++|++||+|+|.+.. +. ....+...+
T Consensus 75 Gl~~~~~~~v~~~c~sg~~ai~~A~~~I~sG~~d~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~ 154 (398)
T PRK06157 75 RLPNIPVTRVENFCATGSEAFRGAVYAVASGAYDIALALGVEKLKDTGYGGLPVANPGTLADMTMPNVTAPGNFAQLASA 154 (398)
T ss_pred CCCCCCEEEEecccHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCccccccccccccchhcccccCchHHHHHHHHHH
Confidence 9876 77889999999999999999999999999999999996421 00 000000000
Q ss_pred ccccC----------------------CCCCCCCC------------C----cCCCCCCCccccceeEEEEEcchHHHHh
Q 010896 293 ALSQR----------------------NEYPKRAS------------R----PWDKDRDGFVMGEGCGILVMESLEHAMK 334 (498)
Q Consensus 293 ~ls~~----------------------~~~p~~~~------------r----pfd~~~~G~v~gEGaaavvLe~~~~A~~ 334 (498)
.+..+ ...|+... + |+.. -|...++|||+++||.+++.|++
T Consensus 155 ~~~~yG~t~e~~~~~~a~vav~~~~~A~~np~A~~r~~~t~e~v~~s~~v~~Pl~~-~d~~~~~DGAaA~vl~s~~~A~~ 233 (398)
T PRK06157 155 YAAKYGVSREDLKRAMAHVSVKSHANGARNPKAHLRKAVTEEQVLKAPMIAGPLGL-FDCCGVSDGAAAAIVTTPEIARA 233 (398)
T ss_pred HHHHhCCCHHHHcccccHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCCch-hccCCCCCccEEEEEecHHHHHh
Confidence 00000 01111111 1 2211 24555799999999999999998
Q ss_pred cCCcEEEEEEeEEEecCCCCC-----CCCCCChHHHHHHHHHHHHHcCCC--CCCcCEEEccCCCCccCcHHHHHHHH--
Q 010896 335 RGANIIAEYLGGAVTCDAHHM-----TDPRSDGLGVSSCIAKSLEDAGVS--PEEVNYVNAHATSTLAGDLAEVNAIK-- 405 (498)
Q Consensus 335 ~g~~i~a~I~g~~~~~dg~~~-----~~p~~~~~~~~~~i~~Al~~Agl~--~~dId~i~~hgtgt~~~D~~E~~al~-- 405 (498)
.+.+..++|+|++...+.... ..+. .......+.+++|++|||+ ++|||++|.|.+.+.. ..+-.+.|.
T Consensus 234 l~~~~~v~I~g~~~~~~~~~~~~~~~~~~~-~~~~~~~aa~~a~~~AGl~~~~~Did~~Ei~D~Fs~~-~l~~~e~lGl~ 311 (398)
T PRK06157 234 LGKKDPVYVKALQLAVSNGWELQYNGWDGS-YFPTTRIAARKAYREAGITDPREELSMAEVHDCFSIT-ELVTMEDLGLS 311 (398)
T ss_pred hCCCCCeEEEEEEEeccccccccccccccc-ccHHHHHHHHHHHHHcCCCCchhcCCEEEEecCChHH-HHHHHHHcCCC
Confidence 887567889999877553211 1111 1223457899999999998 7999999999776654 222222221
Q ss_pred ------HHh-------cCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCccccc
Q 010896 406 ------KVF-------KDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQH 472 (498)
Q Consensus 406 ------~~f-------~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~ 472 (498)
+.+ +...+++.++.-...||+.+|+|+..++.+++||+... ...|..
T Consensus 312 ~~Ge~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~a--------------------g~rQv~ 371 (398)
T PRK06157 312 ERGQAWRDVLDGFFDADGGLPCQIDGGLKCFGHPIGASGLRMLYEMYLQLLGRA--------------------GERQLK 371 (398)
T ss_pred CCCchHHHHHCCCccCCCCeeecCCCCcccCCCcccHhHHHHHHHHHHHhcccc--------------------cCccCC
Confidence 000 01125666666667899999999999999999998743 112334
Q ss_pred CccEEEEEcccc---ccceeeEEEe
Q 010896 473 HVNVAISNSFGF---GGHNSVVVFA 494 (498)
Q Consensus 473 ~~~~alv~s~G~---gG~n~~~vl~ 494 (498)
+.+++++++.|- |..++..||.
T Consensus 372 ~a~~~l~~~~gg~~~~~~~~~~~~~ 396 (398)
T PRK06157 372 NPRLALTHNLGGAPGQNVCSVSIVG 396 (398)
T ss_pred CccEEEEeccCCcCCCCEEEEEEEe
Confidence 568899988773 3333444444
|
|
| >PRK06690 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.5e-20 Score=188.26 Aligned_cols=265 Identities=20% Similarity=0.290 Sum_probs=182.6
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+..+.+++++ |+ + +.+| .|++|...+.. .| .+..++...
T Consensus 26 ~~L~~~a~~~~~~--gi---~-~~Id----~vi~G~~~~~~---------------------------~~-~~r~~~~~~ 67 (361)
T PRK06690 26 QQLAAPLLTFLSK--GM---E-REID----DVILGNVVGPG---------------------------GN-VARLSALEA 67 (361)
T ss_pred HHHHHHHHHHHHc--cc---h-hhcC----EEEEEecCCCc---------------------------ch-HHHHHHHHc
Confidence 4688888888744 88 3 3555 58888642211 11 122355667
Q ss_pred cCC-C-CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hh----hH---------HHHh------hcc--
Q 010896 237 GLM-G-PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PT----GV---------GGFI------ACR-- 292 (498)
Q Consensus 237 gl~-G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~----~~---------~~~~------~~~-- 292 (498)
|+. + |+++|+++|+||+.|+..|+++|++|++|++||||+|.+.. |. .+ ++.. +.+
T Consensus 68 Gl~~~~p~~tV~~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygit 147 (361)
T PRK06690 68 GLGLHIPGVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNIT 147 (361)
T ss_pred CCCCCCCceehhhhhhHHHHHHHHHHHHHHCCCCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCC
Confidence 775 4 99999999999999999999999999999999999998642 21 00 0000 000
Q ss_pred --------ccccC-------CCC---------------CCC---------CCCc-CCC-----CCCCccccceeEEEEEc
Q 010896 293 --------ALSQR-------NEY---------------PKR---------ASRP-WDK-----DRDGFVMGEGCGILVME 327 (498)
Q Consensus 293 --------~ls~~-------~~~---------------p~~---------~~rp-fd~-----~~~G~v~gEGaaavvLe 327 (498)
..|.+ +.. ... ..+| |+. ..+...++|||+++||+
T Consensus 148 re~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~~~~d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~DGAaAvvl~ 227 (361)
T PRK06690 148 REMQDEYACLSYKRTLQALEKGYIHEEILSFNGLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVM 227 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCceecccCccccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCCCeEEEEEe
Confidence 00000 000 000 0012 221 11223368999999999
Q ss_pred chHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHH
Q 010896 328 SLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKV 407 (498)
Q Consensus 328 ~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~ 407 (498)
+.+.|++.|.++.++|.+++..... |.....+...+++++|+++|++++|||++|.|-..+.. +...+ +.
T Consensus 228 s~e~A~~lg~~p~~~i~~~~~~~~~-----~~~~~~~~~~a~~~al~~Agl~~~Did~~ei~eafa~~----~~~~~-e~ 297 (361)
T PRK06690 228 EEGQARKLGYKPVLRFVRSAVVGVD-----PNLPGTGPIFAVNKLLNEMNMKVEDIDYFEINEAFASK----VVACA-KE 297 (361)
T ss_pred cHHHHHHcCCCceEEEEEEEEeccC-----cccchhHHHHHHHHHHHHcCCCHHHcCEeeecchhHHH----HHHHH-Hh
Confidence 9999999999998889998876421 22234567889999999999999999999999544332 22222 22
Q ss_pred hc-CCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEcccccc
Q 010896 408 FK-DTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGG 486 (498)
Q Consensus 408 f~-~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG 486 (498)
++ ...++++++....+||+.|++|+.+++.++.+|+.. +.++.+.+.+.-||
T Consensus 298 lgl~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~~~---------------------------~~~~g~~~~c~~gG 350 (361)
T PRK06690 298 LQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKRE---------------------------DMKYGIATLGIGGG 350 (361)
T ss_pred cCCCchhcccCCcHHhccCchhhhHHHHHHHHHHHHHHh---------------------------CCCEEEEEEcccCc
Confidence 33 135688888999999999999999999999999651 34678888888999
Q ss_pred ceeeEEEeeC
Q 010896 487 HNSVVVFAPF 496 (498)
Q Consensus 487 ~n~~~vl~~~ 496 (498)
...++|+++.
T Consensus 351 ~g~a~~~e~~ 360 (361)
T PRK06690 351 IGLALLFEKV 360 (361)
T ss_pred ceeEEEEEec
Confidence 9999999875
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.5e-20 Score=188.93 Aligned_cols=283 Identities=18% Similarity=0.179 Sum_probs=185.1
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.+|+++||+|+|+ +++++| ++++++.... +.+ ....+..++..+
T Consensus 30 ~~L~~~A~~~Al~dagl---~~~dID----~~i~~~~~~~-----------------------~~~--~~~~a~~l~~~l 77 (392)
T PRK06065 30 QELAWEAASKALDEAGL---ELKDID----CVVIGSAPDA-----------------------FDG--VHMKGEYLSHGS 77 (392)
T ss_pred HHHHHHHHHHHHHHcCC---CHHHCC----EEEEeccCCc-----------------------ccc--cccHHHHHHHHc
Confidence 47999999999999999 455666 6777642110 000 122344677888
Q ss_pred cCCC-CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-------------------hhhH-----HHHhhc
Q 010896 237 GLMG-PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-------------------PTGV-----GGFIAC 291 (498)
Q Consensus 237 gl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-------------------p~~~-----~~~~~~ 291 (498)
|+.+ |.+.|+++|+|+..+|..|+.+|++|++|.+||+|.|.+.. |... ..+...
T Consensus 78 G~~~~~~~~V~~~gasG~~al~~A~~~I~sG~ad~vLVvg~e~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~Al~a~ 157 (392)
T PRK06065 78 GGIRKPVSRVYVGGATGVMTAIAGWYHVASGLCQKVLAVAEEKMSPARPHPQAVFRYIWDPILEKPLNPNLIWIFAMEMH 157 (392)
T ss_pred CCCCCCeEEEecCchhHHHHHHHHHHHHhCCCCCEEEEEEeecccccccchhHHHhhhccchhccCCCccHHHHHHHHHH
Confidence 8874 88999999999999999999999999999999999886311 0000 011011
Q ss_pred cccccCC------------------CCCCC----------------CCCcCCCCCCCccccceeEEEEEcchHHHHhcCC
Q 010896 292 RALSQRN------------------EYPKR----------------ASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGA 337 (498)
Q Consensus 292 ~~ls~~~------------------~~p~~----------------~~rpfd~~~~G~v~gEGaaavvLe~~~~A~~~g~ 337 (498)
+.+..++ .+|.. -+-|+.. -+...++||++++||.+++.|++.+.
T Consensus 158 rym~~yG~~~e~lA~vav~~~~~A~~NP~A~~r~~lt~e~vl~s~~ia~Pl~l-~d~~~~~DGAaA~vl~s~e~A~~l~~ 236 (392)
T PRK06065 158 RYMATYGIKKEEIALVSVKNKRNALNNPYAQLGSKITVEDVLKSEVLVWPVQL-LDVSPVSDGAAAIVLASEDLARRYTD 236 (392)
T ss_pred HHHHHHCcCHHHHHHHHHHHHHhhccCchhhhcCCCCHHHHhcCCcccCCCch-hhcCCCCCceEEEEEeCHHHHHhcCC
Confidence 1111110 11111 0012211 24455799999999999999998886
Q ss_pred cEEEEEEeEEEecCCCCCCCC-CCChHHHHHHHHHHHHHcCCCC--CCcCEEEccCCCCccCcHHHHHHHH--------H
Q 010896 338 NIIAEYLGGAVTCDAHHMTDP-RSDGLGVSSCIAKSLEDAGVSP--EEVNYVNAHATSTLAGDLAEVNAIK--------K 406 (498)
Q Consensus 338 ~i~a~I~g~~~~~dg~~~~~p-~~~~~~~~~~i~~Al~~Agl~~--~dId~i~~hgtgt~~~D~~E~~al~--------~ 406 (498)
++ ..|+|++...+....... .........+.+++|+++|+++ +|||++|.|.+.|.. .....+++. +
T Consensus 237 ~~-v~I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~D~Fs~~-~l~~~E~lG~~~~G~~~~ 314 (392)
T PRK06065 237 TP-VWVEGVGWTLDNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRKEIDVAEPYDPFDYK-ELHHLEGLQLAKRGEAPK 314 (392)
T ss_pred CC-EEEEEEEEecCccccccccccccHHHHHHHHHHHHHcCCCCchhhCcEEEecCCChHH-HHHHHHHcCCCCCCcHHH
Confidence 65 448999887654322111 1223345679999999999985 999999999887654 333333331 1
Q ss_pred Hh-------cCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCc-cEEE
Q 010896 407 VF-------KDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHV-NVAI 478 (498)
Q Consensus 407 ~f-------~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~-~~al 478 (498)
.+ ++..+++.++.-...||+.+|+|+.+++.+++||+... ..+|..+. ++++
T Consensus 315 ~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~a--------------------g~rQv~~a~~~~l 374 (392)
T PRK06065 315 LLKEGVFDIDGDIPSSPSGGLLGVGNPIAAAGLMKVISIYWQLKGTA--------------------GKMQVKKPVHTGV 374 (392)
T ss_pred HHHCCCccCCCCeeecCCCccccCCCCccHHHHHHHHHHHHHHhccc--------------------cCCcCCCccceeE
Confidence 11 11225666666777799999999999999999998742 11233345 6889
Q ss_pred EEccc-cccceeeEEEe
Q 010896 479 SNSFG-FGGHNSVVVFA 494 (498)
Q Consensus 479 v~s~G-~gG~n~~~vl~ 494 (498)
++++| .+..++.+||+
T Consensus 375 ~~~~Gg~~~~~~~~il~ 391 (392)
T PRK06065 375 AQAWGDLMQAGTVIVLR 391 (392)
T ss_pred EeccccccceeEEEEec
Confidence 98887 44455566664
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.9e-20 Score=190.45 Aligned_cols=292 Identities=16% Similarity=0.181 Sum_probs=182.9
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.+++++||+|||+ +++++| ++++|..... +.+ .+.....++..+
T Consensus 38 ~eL~~eA~~~Al~dagl---~~~dID----~vv~~~~~~~-----------------------~~g--~~~~~~~~~~~l 85 (430)
T PRK06365 38 RERVKKAFDYAMNDAGL---TLADID----GSVASYFSDH-----------------------FQR--QLLAGIMVQDYL 85 (430)
T ss_pred HHHHHHHHHHHHHHcCC---CHHHcC----EEEEeccccc-----------------------ccc--cchhhHHHHHhc
Confidence 47999999999999999 445666 5665531100 000 111223456788
Q ss_pred cCCC-CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchh-h------------------------HHHHhh
Q 010896 237 GLMG-PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPT-G------------------------VGGFIA 290 (498)
Q Consensus 237 gl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~-~------------------------~~~~~~ 290 (498)
|++. |+++|+++|+|+..||..|++.|++|++|+|||+|+|.+.... . +..+..
T Consensus 86 Gl~~~~~~~v~~~~aSg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~al~a 165 (430)
T PRK06365 86 GLVPKPSKRIEGGGATGGLAFQAGYEEIASGRMDCVAVYGFETMSHVNTWKGNEFIALASDTNFDYPLGGFYTGYYAMMA 165 (430)
T ss_pred CCCCCceEEEeCCcHHHHHHHHHHHHHHHcCCCCEEEEEEeeecccccchhhhhhhcccccccccccccCccHHHHHHHH
Confidence 9876 8889999999999999999999999999999999999642211 0 000000
Q ss_pred ccccccCCCCCC------------CCCCcCCC---------------------CCCCccccceeEEEEEcchHHHHhcCC
Q 010896 291 CRALSQRNEYPK------------RASRPWDK---------------------DRDGFVMGEGCGILVMESLEHAMKRGA 337 (498)
Q Consensus 291 ~~~ls~~~~~p~------------~~~rpfd~---------------------~~~G~v~gEGaaavvLe~~~~A~~~g~ 337 (498)
.+.+..++.+++ ....||.. ..|...++|||+++||.+++.|++.+.
T Consensus 166 ~ry~~~yG~t~e~la~vav~~~~~A~~NP~A~~~~~~t~e~v~~s~~i~~Plt~~d~~~~sDGAaAvvl~See~A~~l~~ 245 (430)
T PRK06365 166 VRHMYEFGTTVEQLAKVSVKNHGNAIHNPFAQSPMKITVEDVRKSPMVSYPLTRLDVCAMSDGAACAILASEDKAFEITD 245 (430)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHhhCcHhhcCCCCCHHHHhcCCccccCcchhhcCCcCCceEEEEEecHHHHHhcCC
Confidence 000000000000 00012111 123334689999999999999998876
Q ss_pred cEEEEEEeEEEecCCCCCCC----------------------C-CCChHHHHHHHHHHHHHcCCC--CCCcCEEEccCCC
Q 010896 338 NIIAEYLGGAVTCDAHHMTD----------------------P-RSDGLGVSSCIAKSLEDAGVS--PEEVNYVNAHATS 392 (498)
Q Consensus 338 ~i~a~I~g~~~~~dg~~~~~----------------------p-~~~~~~~~~~i~~Al~~Agl~--~~dId~i~~hgtg 392 (498)
++. .|++++...++..... | .........+++++|+++||+ ++|||++|.|.+.
T Consensus 246 ~pv-~i~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~F 324 (430)
T PRK06365 246 KPV-LIKAIGTGSDTLRLADRPFGEVPLLPNESPDDYKDLRYPGVHSFRAGRMAAKEAYEMAGITDPLNDLDLIELHDAY 324 (430)
T ss_pred CCe-EEEEEEEeccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCCCHHHCCEEEeecCC
Confidence 653 4666665544322111 0 012223457999999999998 7999999999776
Q ss_pred CccCcHHHHHHHH--------HHhc-------CCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCC
Q 010896 393 TLAGDLAEVNAIK--------KVFK-------DTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLE 457 (498)
Q Consensus 393 t~~~D~~E~~al~--------~~f~-------~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~ 457 (498)
+.. ..+..++|. +.+. +..+++.++.-...||+.||+|+.+++.+++||+...-+. +
T Consensus 325 a~~-~l~~lE~lGl~~~Ge~~~~~~~G~~~~~G~~piNt~GG~la~Ghp~GatG~~~~~e~~~QLrG~a~~~---~---- 396 (430)
T PRK06365 325 TSS-EIQTYEDLGLCKYGEGGQFIESGKPELPGKLPVNPSGGLLAAGHAVGATGIMQAVFMFWQLQGRIKKH---F---- 396 (430)
T ss_pred cHH-HHHHHHHcCCCCCCchHHHHHCCCcCCCCCccccCCCchhcCCCcccHHHHHHHHHHHHHHhcccCCC---C----
Confidence 654 222222221 0000 1135666666677799999999999999999999853210 0
Q ss_pred CCCCcCcCCCc-ccccCccEEEEEccc-cccceeeEEEeeCC
Q 010896 458 PEVTIDTVPNV-KKQHHVNVAISNSFG-FGGHNSVVVFAPFS 497 (498)
Q Consensus 458 ~~~~~~~v~~~-~~~~~~~~alv~s~G-~gG~n~~~vl~~~~ 497 (498)
-.. .|..+.++++++++| .|..++.+||++++
T Consensus 397 --------~~~~rQv~~a~~~l~~~~gg~~~~~~~~vl~~~~ 430 (430)
T PRK06365 397 --------HDDYLQVKNAKRGLIHSHAGTGTYVTVTILEAPK 430 (430)
T ss_pred --------CcccccCCCccEEEEecCCcccceEEEEEEecCC
Confidence 001 123356789999887 45567788887753
|
|
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-20 Score=191.72 Aligned_cols=252 Identities=19% Similarity=0.226 Sum_probs=167.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHH
Q 010896 155 DCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAI 234 (498)
Q Consensus 155 ~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~ 234 (498)
....|+.+|+++||+++|++ +++++ .+++++.... ......+..++.
T Consensus 94 ~~~~la~~Aa~~aL~~agl~---~~~Id----~li~~~~~~~--------------------------~~~p~~a~~v~~ 140 (372)
T PRK07515 94 IQAEMGVAAARQALARAGRT---AEDID----AVIVACSNMQ--------------------------RAYPAMAIEIQQ 140 (372)
T ss_pred hHHHHHHHHHHHHHHHcCCC---HHHCC----EEEEECCCCC--------------------------CCCcHHHHHHHH
Confidence 34579999999999999994 44555 4677653111 011224567888
Q ss_pred hhcCCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCC
Q 010896 235 DTGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDG 314 (498)
Q Consensus 235 ~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G 314 (498)
.||+++++++++.+|+|++.||..|+++|++|.+|.+||+|+|.+. .. .-|+....+
T Consensus 141 ~Lgl~~~~~~v~~aCasg~~al~~A~~~i~~g~~~~vLvv~~e~~s-~~----------------------~~~~d~~~~ 197 (372)
T PRK07515 141 ALGIEGFAFDMNVACSSATFGIQTAANAIRSGSARRVLVVNPEICS-GH----------------------LNFRDRDSH 197 (372)
T ss_pred hcCCCCcEEEecchhHHHHHHHHHHHHHHHcCCCCEEEEEeeeccc-cc----------------------ccccCCCCC
Confidence 9999999999999999999999999999999999999999999621 10 001222357
Q ss_pred ccccceeEEEEEcchHHHHhcC-CcEEEEEEeE------------EEecCCCCCCCCCC----ChHH--------HHHHH
Q 010896 315 FVMGEGCGILVMESLEHAMKRG-ANIIAEYLGG------------AVTCDAHHMTDPRS----DGLG--------VSSCI 369 (498)
Q Consensus 315 ~v~gEGaaavvLe~~~~A~~~g-~~i~a~I~g~------------~~~~dg~~~~~p~~----~~~~--------~~~~i 369 (498)
+++||||+|+||++.+.+.+++ ..+++..... ....+..+...+.. ++.. +.++|
T Consensus 198 ~lfGDgAaA~vL~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i 277 (372)
T PRK07515 198 FIFGDVATAVIVERADTATSAGGFEILGTRLFTQFSNNIRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHI 277 (372)
T ss_pred EEecCccEEEEEeeccccccCCCceEEEEEeecccccceecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHH
Confidence 9999999999999866553222 2455443111 00001111111111 3332 57899
Q ss_pred HHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccC
Q 010896 370 AKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLH 448 (498)
Q Consensus 370 ~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ip 448 (498)
+++|+++|++++|||||.+|.+++..+|.+ ++++|+. ...-.....-..+||+.+|+=.+.|-.+ .. .+
T Consensus 278 ~~~L~~~gl~~~dId~~~~Hq~~~~~~d~~----~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~~----~~-~~- 347 (372)
T PRK07515 278 VEHLAENGLTPADVKRFWLHQANINMNQLI----GKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHKH----SD-DL- 347 (372)
T ss_pred HHHHHHcCCCHHHCCEEEECCCCHHHHHHH----HHHhccCCCChhhceEeHHhcCCchhhHHHHHHHHH----hc-cC-
Confidence 999999999999999999999999998875 3444552 1111112345778999888755544332 11 10
Q ss_pred CCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 449 PTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 449 p~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
.+.+.++..+||.|-+-.+++|++
T Consensus 348 -----------------------~~Gd~vll~~~G~G~~~~~~ll~~ 371 (372)
T PRK07515 348 -----------------------AAGDLGVICSFGAGYSIGSVIVRK 371 (372)
T ss_pred -----------------------CCCCEEEEEEecccHHHHHHHhcc
Confidence 122567788999888777777764
|
|
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.1e-20 Score=186.83 Aligned_cols=280 Identities=17% Similarity=0.187 Sum_probs=183.0
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.+|+++||+|||+ .+.++| +++.+.. .. .. ....++..+
T Consensus 26 ~~L~~eA~~~Al~DAgl---~~~dID----~~~~~~~---~~-----------------------~~----~~~~~~~~l 68 (388)
T PRK08142 26 AQLHAEVAKGALADAGL---SLADVD----GYFCAGD---AP-----------------------GL----GPASMVDYL 68 (388)
T ss_pred HHHHHHHHHHHHHHcCC---CHHHCC----EEEEcCC---CC-----------------------Cc----cHHHHHHhC
Confidence 47999999999999999 455666 3433110 00 00 012477788
Q ss_pred cCCC-CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchh---h------------------------HHHH
Q 010896 237 GLMG-PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPT---G------------------------VGGF 288 (498)
Q Consensus 237 gl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~---~------------------------~~~~ 288 (498)
|+++ |...+.++|+|+..+|..|+..|++|++|.|||+|+|...... . +..+
T Consensus 69 Gl~~~~~~~v~~gg~s~~~a~~~A~~~I~sG~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~Al 148 (388)
T PRK08142 69 GLKLRHVDSTETGGSSYLAHVGHAAQAIAAGKCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYGPTTHNLYAM 148 (388)
T ss_pred CCCCeeeccccCCcHHHHHHHHHHHHHHHcCCCCEEEEEeeeecccCCccccccccccccccccchhcccccccHHHHHH
Confidence 9876 7788999999999999999999999999999999988632100 0 0000
Q ss_pred hhccccccCC------------------CCCCC----------------CCCcCCCCCCCccccceeEEEEEcchHHHHh
Q 010896 289 IACRALSQRN------------------EYPKR----------------ASRPWDKDRDGFVMGEGCGILVMESLEHAMK 334 (498)
Q Consensus 289 ~~~~~ls~~~------------------~~p~~----------------~~rpfd~~~~G~v~gEGaaavvLe~~~~A~~ 334 (498)
...+.+..++ .+|.. -+-|+.. -+...++||++++||.+++.|++
T Consensus 149 ~a~~ym~~yG~t~e~la~vav~~~~~A~~NP~A~~r~~~t~e~vl~s~~Ia~Pl~l-~d~~~~~DGAaA~vl~s~~~A~~ 227 (388)
T PRK08142 149 CAMRHMHEYGTTSEQLAWIKVAASHHAQHNPHAMLRDVVTVEDVLNSPMIADPLHR-LDCCVVTDGGGALVVVRPEIARS 227 (388)
T ss_pred HHHHHHHHHCcCHHHHHHHHHHHHHHhccCChhhcCCCCCHHHHhcCCcccCCchh-hccCcccCceEEEEEecHHHHhh
Confidence 0000000000 11111 1122222 35556799999999999999988
Q ss_pred cCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHH--------H
Q 010896 335 RGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIK--------K 406 (498)
Q Consensus 335 ~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~--------~ 406 (498)
.+ ++.++|+|++..++..+...++........+++++|++||++++|||++|.|.+.|.. ..+..++|- +
T Consensus 228 l~-~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGi~~~did~~elyD~Fs~~-~~~~~E~lGl~~~Ge~~~ 305 (388)
T PRK08142 228 LK-RPLVKVLGAGEAIKGQMGGKVDLTYSGAAWSGPAAFAEAGVTPADIKYASIYDSFTIT-VLMQLEDLGFCKKGEGGK 305 (388)
T ss_pred cC-CCCEEEEEEEEecCCccccCcccccHHHHHHHHHHHHHcCCCHHHCCEEEEeccchHH-HHHHHHHcCCCCCCchHH
Confidence 86 4558899999887765434444444556789999999999999999999999877665 333333331 0
Q ss_pred HhcC------CCcccc--cccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEE
Q 010896 407 VFKD------TSEMKM--NGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAI 478 (498)
Q Consensus 407 ~f~~------~~~~~v--~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~al 478 (498)
.+.+ ...+|+ ++.-...||+.+|+|+.+++++++||+...-+ ..|..+.++++
T Consensus 306 ~v~~g~~~~~~G~lPvN~sGG~l~~G~p~gatG~~~~~E~~~QLrG~ag~-------------------~rQV~~a~~gl 366 (388)
T PRK08142 306 FVADGNLISGVGKLPFNTDGGGLCNNHPANRGGMTKVIEAVRQLRGEAHP-------------------AVQVPNCDLAL 366 (388)
T ss_pred HHHCCCcccCCCCccccCCChhhcCCCcCcccHHHHHHHHHHHHcCCCCC-------------------CCCCCCCcEEE
Confidence 0101 123444 44445569999999999999999999873210 11233567899
Q ss_pred EEcccc-cc---ceeeEEEee
Q 010896 479 SNSFGF-GG---HNSVVVFAP 495 (498)
Q Consensus 479 v~s~G~-gG---~n~~~vl~~ 495 (498)
+.++|- .| .++.+||++
T Consensus 367 ~~~~Gg~~~~~~~~~~~vl~~ 387 (388)
T PRK08142 367 AHGTGGLLGSRHGSATLILER 387 (388)
T ss_pred EeCCCCCCcCCCceEEEEEec
Confidence 988873 22 335666653
|
|
| >PRK06289 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.3e-19 Score=187.36 Aligned_cols=287 Identities=17% Similarity=0.143 Sum_probs=179.3
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.+++++||+|||+ +++++| +|++|+..+..... ....... .. ....
T Consensus 27 ~eLa~eA~~~AL~dAgl---~~~dID----~vi~g~~~~~~~~~--------------------~~~~~~~-~~--~~~~ 76 (403)
T PRK06289 27 ADLTREVVDGTLAAAGV---DADDIE----VVHVGNFFGELFAG--------------------QGHLGAM-PA--TVHP 76 (403)
T ss_pred HHHHHHHHHHHHHHcCC---CHHHCC----EEEEEecccccccc--------------------ccccchH-HH--HHhh
Confidence 57999999999999999 455666 68887642211000 0000000 11 1223
Q ss_pred cCCC-CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchh-h-----H--------------------HHHh
Q 010896 237 GLMG-PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPT-G-----V--------------------GGFI 289 (498)
Q Consensus 237 gl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~-~-----~--------------------~~~~ 289 (498)
++.| |.++++++|+|++.||..|+.+|++|++|.+||+|+|.+.... . + ..+.
T Consensus 77 ~~~g~~~~~v~~~Casg~~al~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 156 (403)
T PRK06289 77 ALWGVPASRHEAACASGSVATLAAMADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFARV 156 (403)
T ss_pred cCCCCceeecccccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHHHH
Confidence 4444 8999999999999999999999999999999999988632110 0 0 0000
Q ss_pred hccccccC------------------CCCCCCCCC------cCC--------------CCCCCccccceeEEEEEcchHH
Q 010896 290 ACRALSQR------------------NEYPKRASR------PWD--------------KDRDGFVMGEGCGILVMESLEH 331 (498)
Q Consensus 290 ~~~~ls~~------------------~~~p~~~~r------pfd--------------~~~~G~v~gEGaaavvLe~~~~ 331 (498)
..+.+..+ ..+|....+ |.+ ..-|...++||++++||.+++.
T Consensus 157 a~~y~~~yG~t~e~la~va~~~~~~A~~NP~A~~~~~~~~~~~~~~d~~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~ 236 (403)
T PRK06289 157 ADEYDRRYGLDEEHLRAIAEINFANARRNPNAQTRGWAFPDEATNDDDATNPVVEGRLRRQDCSQVTDGGAGVVLASDAY 236 (403)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHccCcHhhcCccccccccchhhhhcCCcccCCCchhhcCCCCCceeEEEEEcHHH
Confidence 00000000 001111111 100 0123334689999999999999
Q ss_pred HHhcCC-cEEEEEEeEEEecCCCCCCC------CCC-ChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHH
Q 010896 332 AMKRGA-NIIAEYLGGAVTCDAHHMTD------PRS-DGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNA 403 (498)
Q Consensus 332 A~~~g~-~i~a~I~g~~~~~dg~~~~~------p~~-~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~a 403 (498)
|++.+. ++.++|+|++..++...... .++ .-.....+.+++|++|||+++|||++|.|...+.. ..+..++
T Consensus 237 a~~l~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~Agi~~~Didv~el~D~fa~~-~l~~le~ 315 (403)
T PRK06289 237 LRDYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVLPHVRQAVLDAYRRAGVGLDDLDGFEVHDCFTPS-EYLAIDH 315 (403)
T ss_pred HHHhccCCCCEEEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCeEEeeeccchHH-HHHHHHH
Confidence 988775 56789999998765432111 111 12335679999999999999999999999877664 3443333
Q ss_pred HHHH--------hcC-----CC--cccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCc
Q 010896 404 IKKV--------FKD-----TS--EMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNV 468 (498)
Q Consensus 404 l~~~--------f~~-----~~--~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~ 468 (498)
+.-. +.+ .. +++.++.-...||+.+|+|+..++.++.||+... ..
T Consensus 316 lGl~~~Ge~~~~v~~G~~~~~G~lpvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~a--------------------g~ 375 (403)
T PRK06289 316 IGLTGPGESWKAIENGEIAIGGRLPINPSGGLIGGGHPVGASGVRMLLDAAKQVTGTA--------------------GD 375 (403)
T ss_pred cCCCCCCcHHHHHhcCCcccCCCeeEcCCCCccccCCCccchHHHHHHHHHHHHhccc--------------------cC
Confidence 3200 000 12 5666666677799999999999999999998732 11
Q ss_pred ccccCccEEEEEccc-cccceeeEEEe
Q 010896 469 KKQHHVNVAISNSFG-FGGHNSVVVFA 494 (498)
Q Consensus 469 ~~~~~~~~alv~s~G-~gG~n~~~vl~ 494 (498)
.|....+.+++.+.| .+|++..+||+
T Consensus 376 ~Qv~~~~~~l~~~~gg~~~~~~~~i~~ 402 (403)
T PRK06289 376 YQVEGAKTFGTLNIGGSTTTTVSFVVG 402 (403)
T ss_pred ccCCchheEEEEecCcccceEEEEEEe
Confidence 122244567777776 44555566653
|
|
| >cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.9e-19 Score=185.09 Aligned_cols=282 Identities=18% Similarity=0.195 Sum_probs=176.1
Q ss_pred HHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHH
Q 010896 155 DCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAI 234 (498)
Q Consensus 155 ~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~ 234 (498)
....|+..++++||+++|++ ++++| .|++|+...... + .+.....+..
T Consensus 22 ~~~el~~~a~~~Al~~agl~---p~dID----~vi~g~~~~~~~-----------------------g--~~~~~~~~~~ 69 (393)
T cd00826 22 LAHEAGAKAIAAALEPAGVA---AGAVE----EACLGQVLGAGE-----------------------G--QNCAQQAAMH 69 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCC---HHHCC----EEEEEEccCCcc-----------------------c--CcHHHHHHHH
Confidence 34579999999999999994 44555 577886432210 0 0111112445
Q ss_pred hhcCCC-CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hhh------H----------------HHHh-
Q 010896 235 DTGLMG-PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PTG------V----------------GGFI- 289 (498)
Q Consensus 235 ~lgl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~~------~----------------~~~~- 289 (498)
.+++.+ |+++|+++|+|++.||..|+++|++|++|++||+|+|.+.. +.. + ..+.
T Consensus 70 ~lg~~~~p~~~V~~~Casg~~al~~A~~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~r~~~~~~a~~s~ 149 (393)
T cd00826 70 AGGLQEAPAIGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAENNAKEKHIDVLINKYGMRACPDAFALAGQ 149 (393)
T ss_pred cCCCCCCcEEEecchhHHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccchhHHHHHHhCChhhccHHHHHHH
Confidence 567766 99999999999999999999999999999999999997421 100 0 0000
Q ss_pred -hc------cc-------cccCC--------CCCCCC------------CCcCC------CCCCCccccceeEEEEEcch
Q 010896 290 -AC------RA-------LSQRN--------EYPKRA------------SRPWD------KDRDGFVMGEGCGILVMESL 329 (498)
Q Consensus 290 -~~------~~-------ls~~~--------~~p~~~------------~rpfd------~~~~G~v~gEGaaavvLe~~ 329 (498)
.. +. ++.++ .+|.-. .+|.. ...+...++|||+++||.++
T Consensus 150 ~~~~~~~~~G~~~e~~a~v~~~~~~~~~~a~~np~a~~~~~~t~e~~~~~~~i~~~~~pl~~~~~~~~~DGAAA~vl~S~ 229 (393)
T cd00826 150 AGAEAAEKDGRFKDEFAKFGVKGRKGDIHSDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAGNACGLNDGAAAAILMSE 229 (393)
T ss_pred HHHHHHHHcCCCHHHEEEEEEecCCCCEEEecCCCCCCCCCCCHHHHhcCCCccCCCCCEechhcCCcCCCeEEEEEecH
Confidence 00 00 11001 011111 01111 11233346899999999999
Q ss_pred HHHHhcCC-cEEEEEEeEEEecCCCC-CCCCC----CChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHH
Q 010896 330 EHAMKRGA-NIIAEYLGGAVTCDAHH-MTDPR----SDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNA 403 (498)
Q Consensus 330 ~~A~~~g~-~i~a~I~g~~~~~dg~~-~~~p~----~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~a 403 (498)
+.|++.+. .-..+|.+.+...+... ...|+ ....+...+++++|++|||+++|||++|.|...+.. |...
T Consensus 230 ~~a~~l~l~~~~v~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~al~~Agi~~~DID~~Ei~d~Fa~~----~l~~ 305 (393)
T cd00826 230 AEAQKHGLQSKAREIQALEMITDMASTFEDKKVIKMVGGDGPIEAARKALEKAGLGIGDLDLIEAHDAFAAN----ACAT 305 (393)
T ss_pred HHHHHcCCcccccccceEEEEEeeeccccCccccccccceeHHHHHHHHHHHcCCCHHHcCeeehhhhhHHH----HHHH
Confidence 99998774 11234555544333211 12222 223445789999999999999999999999554332 3322
Q ss_pred HHHH-hcC-----------------CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcC
Q 010896 404 IKKV-FKD-----------------TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTV 465 (498)
Q Consensus 404 l~~~-f~~-----------------~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v 465 (498)
+... |.. ..+++.++.-...||+.||+|+..++.++++|+...
T Consensus 306 ~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~GhP~gAtG~~~~~e~~~qL~g~a------------------- 366 (393)
T cd00826 306 NEALGLCPEGQGGALVDRGDNTYGGKSIINPNGGAIAIGHPIGASGAAICAELCFELKGEA------------------- 366 (393)
T ss_pred HHHhCCCcccchhhhhhcCccccCCcceECCCCchhhcCCCccccHHHHHHHHHHHHhhhh-------------------
Confidence 2222 111 146667777777899999999999999999997632
Q ss_pred CCcccccCccEEEEEccccccceeeEEEe
Q 010896 466 PNVKKQHHVNVAISNSFGFGGHNSVVVFA 494 (498)
Q Consensus 466 ~~~~~~~~~~~alv~s~G~gG~n~~~vl~ 494 (498)
...|..+.+++++.+.| |..+++|++
T Consensus 367 -g~~q~~~~~~~~~~~~G--g~g~a~~~~ 392 (393)
T cd00826 367 -GKRQGAGAGLALLCIGG--GGGAAMCIE 392 (393)
T ss_pred -ccccCCCcCEEEEEcCC--CceeEEEEe
Confidence 11122345678777666 556667765
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK06066 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.8e-19 Score=181.17 Aligned_cols=280 Identities=16% Similarity=0.187 Sum_probs=178.9
Q ss_pred HHHHHHHHHHHHHHCC-CCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 157 WRYCLVAGRRALEEAS-LSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG-~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
..|+.+++++||+||| +++ .+++| ++++++. .... .. ......++..
T Consensus 26 ~eL~~eA~~~Al~DAG~l~~--~~dId----~~~~~~~-~~~~-----------------------~~--~~~~~~~~~~ 73 (385)
T PRK06066 26 REMMFEAASRAYKDAGNINP--RRDVD----SFISCQE-DFWE-----------------------GI--AIADEFAPDQ 73 (385)
T ss_pred HHHHHHHHHHHHHhcCCCCC--hhcCC----EEEEecC-cccC-----------------------cc--cccchhHHHH
Confidence 4799999999999999 932 14566 5666531 1000 00 0011234566
Q ss_pred hcCC-CCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc------------------h------hhHHHHhh
Q 010896 236 TGLM-GPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII------------------P------TGVGGFIA 290 (498)
Q Consensus 236 lgl~-Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~------------------p------~~~~~~~~ 290 (498)
+|+. .|.+.+ |+|+..++..|+..|++|.||.+||.|++.... | ..+..+..
T Consensus 74 lg~~~~~~~~v---~~sg~~a~~~A~~aV~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~p~~~~al~a 150 (385)
T PRK06066 74 IGGAMRPTMTV---AGDGLQGLAHAVMHINSGLANVVVVEAHSKPSDILTFSDVVKFAMDPIYVRPIGPPNPHFIAGLDA 150 (385)
T ss_pred cccCCCCeEEE---eCcHHHHHHHHHHHHHcCCCCEEEEEEEeeccCccchhhhhhcccCcceecccCCCcHHHHHHHHH
Confidence 7774 377665 899999999999999999999999999885211 1 11111111
Q ss_pred ccccccCC------------------CCCCC----------------CCCcCCCCCCCccccceeEEEEEcchHHHHhcC
Q 010896 291 CRALSQRN------------------EYPKR----------------ASRPWDKDRDGFVMGEGCGILVMESLEHAMKRG 336 (498)
Q Consensus 291 ~~~ls~~~------------------~~p~~----------------~~rpfd~~~~G~v~gEGaaavvLe~~~~A~~~g 336 (498)
.+.+..++ .+|.. -+-|+.. .|...++|||+++||.+.+.|++.+
T Consensus 151 ~rym~~yG~t~E~lA~Vavk~r~nA~~NP~A~~r~~~t~edvl~S~~ia~Pl~~-~d~~~~~DGAaAvvl~s~~~a~~l~ 229 (385)
T PRK06066 151 VKFMSRKGITREDLALVVEKNKKAGLSNPRASYASNISLEDVLSSEYVVYPLTE-LDIAPFVDGAIVVVLASEEVAKKLT 229 (385)
T ss_pred HHHHHHHCcCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCchh-hccCCCCCceEEEEEeCHHHHHhcC
Confidence 11111110 01111 1112221 3455579999999999999999888
Q ss_pred CcEEEEEEeEEEecCCCCCCCCCC-ChHHHHHHHHHHHHHcCCC--CCCcCEEEccCCCCccCcHHHHHHHH--------
Q 010896 337 ANIIAEYLGGAVTCDAHHMTDPRS-DGLGVSSCIAKSLEDAGVS--PEEVNYVNAHATSTLAGDLAEVNAIK-------- 405 (498)
Q Consensus 337 ~~i~a~I~g~~~~~dg~~~~~p~~-~~~~~~~~i~~Al~~Agl~--~~dId~i~~hgtgt~~~D~~E~~al~-------- 405 (498)
.++. +|+|++...+.......+. .......+.+++|++|||+ ++|||++|.|...|.. ..+..+.|-
T Consensus 230 ~~pv-~I~g~g~~~~~~~~~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~DiD~~ei~D~Ft~~-~l~~~e~lG~~~~Ge~~ 307 (385)
T PRK06066 230 DDPV-WIKGIGWSTESSNLETAELGKANYMRIAADMAYKMAGIESPRKEVDAAEVDDRYSYK-ELQHIEALRLSEEPEKD 307 (385)
T ss_pred CCCE-EEEEEEEecCCcccccccccccHHHHHHHHHHHHHcCCCCCHHHCcEEEEecCChHH-HHHHHHHcCCCCCCchH
Confidence 7765 8999988765332221111 2233347999999999998 6999999999777654 233333331
Q ss_pred HHhc-------CCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEE
Q 010896 406 KVFK-------DTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAI 478 (498)
Q Consensus 406 ~~f~-------~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~al 478 (498)
+.+. ...+++.++.-...||+.+|+|+..++.+++||+... ...| .+.++++
T Consensus 308 ~~v~~G~~~~~G~~PvN~~GG~la~Ghp~gatG~~~v~e~~~QL~g~A--------------------g~rQ-~~a~~~l 366 (385)
T PRK06066 308 SLLREGNFDPQGELPVNPSGGHLAKGVPLEASGLSLLLDAVEYLRGEA--------------------GARQ-GKAERAV 366 (385)
T ss_pred HHHHCCCCCCCCCccccCCCchhcCCCccchhHHHHHHHHHHHHcccc--------------------cccC-CCCcEEE
Confidence 0011 1224666666666799999999999999999998842 1223 4567888
Q ss_pred EEccc--cccceeeEEEee
Q 010896 479 SNSFG--FGGHNSVVVFAP 495 (498)
Q Consensus 479 v~s~G--~gG~n~~~vl~~ 495 (498)
+.+.| +++..+..||++
T Consensus 367 ~~~~gg~~~~~~~v~v~~~ 385 (385)
T PRK06066 367 VASWRGIPTLTGSVVVVER 385 (385)
T ss_pred EcCCCccCCccEEEEEEeC
Confidence 88877 567777777764
|
|
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.1e-18 Score=171.97 Aligned_cols=246 Identities=19% Similarity=0.268 Sum_probs=165.9
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+.+|+++||+++|++ +++++ .+++++..+ .......+.+|+..
T Consensus 52 ~~~la~~Aa~~aL~~ag~~---~~dId----~li~~~~~~--------------------------~~~~p~~a~~v~~~ 98 (329)
T PRK07204 52 SSYMGAEAAKKAVEDAKLT---LDDID----CIICASGTI--------------------------QQAIPCTASLIQEQ 98 (329)
T ss_pred HHHHHHHHHHHHHHHcCCC---HHHCC----EEEEECCCC--------------------------CCCCccHHHHHHHH
Confidence 4689999999999999994 44555 366665321 11123567789999
Q ss_pred hcCCC---CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCC
Q 010896 236 TGLMG---PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDR 312 (498)
Q Consensus 236 lgl~G---p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~ 312 (498)
||+++ |++.++.+|+|++.||..|..+|++|.++.+||++.|..... ..++...
T Consensus 99 lgl~~~~~~~~~v~~~C~~~~~al~~a~~~l~~g~~~~~Lvv~~e~~s~~-----------------------~~~~~~~ 155 (329)
T PRK07204 99 LGLQHSGIPCFDINSTCLSFITALDTISYAIECGRYKRVLIISSEISSVG-----------------------LNWGQNE 155 (329)
T ss_pred hCCCCCCceEEEccchhHHHHHHHHHHHHHHHCCCCCEEEEEEeccccCC-----------------------CCcccCc
Confidence 99985 788999999999999999999999999999999999962110 1122334
Q ss_pred CCccccceeEEEEEcchHHHHhcCCcEEE-------------EEEeEEEecCCCCCCCC-------CCChH--------H
Q 010896 313 DGFVMGEGCGILVMESLEHAMKRGANIIA-------------EYLGGAVTCDAHHMTDP-------RSDGL--------G 364 (498)
Q Consensus 313 ~G~v~gEGaaavvLe~~~~A~~~g~~i~a-------------~I~g~~~~~dg~~~~~p-------~~~~~--------~ 364 (498)
+++++||||+|+||++.+. +..+.+ ++.+.+...+......+ ..++. .
T Consensus 156 ~~~lfGDGAaA~ll~~~~~----~~~il~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (329)
T PRK07204 156 SCILFGDGAAAVVITKGDH----SSRILASHMETYSSGAHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKY 231 (329)
T ss_pred ceEEEecccEEEEEEEcCC----CCcEEEEEEEEecCCCCceEEecCCcCCCCcccccccccCceEEECCHHHHHHHHHH
Confidence 6789999999999997542 122222 22222111110000000 01122 2
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhc
Q 010896 365 VSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITT 444 (498)
Q Consensus 365 ~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~ 444 (498)
+.++++++|+++|++++|||++..|..+... .+++.+.++-. +-.+......+||+.+|+=.+.|... ++.
T Consensus 232 ~~~~i~~~L~~~gl~~~did~~~~H~~~~~~-----~~~i~~~l~l~-~e~~~~~~~~~Gn~~sas~~~~L~~~---~~~ 302 (329)
T PRK07204 232 LMKFIDKLLMDAGYTLADIDLIVPHQASGPA-----MRLIRKKLGVD-EERFVTIFEDHGNMIAASIPVALFEA---IKQ 302 (329)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCCCCHHH-----HHHHHHHcCCC-HHHhhhhHhhhCcHHHHHHHHHHHHH---HHc
Confidence 4588999999999999999999999887765 33566666541 11234667889999877755555543 333
Q ss_pred CccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEe
Q 010896 445 GWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494 (498)
Q Consensus 445 g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~ 494 (498)
|.+ .+.+.++..+||.|-+-.+++|+
T Consensus 303 g~~------------------------~~Gd~vll~~~G~G~s~~~~ll~ 328 (329)
T PRK07204 303 KKV------------------------QRGNKILLLGTSAGLSIGGILLE 328 (329)
T ss_pred CCC------------------------CCCCEEEEEEEchhhhheeeEEe
Confidence 332 12356788899999999888886
|
|
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-17 Score=170.70 Aligned_cols=271 Identities=17% Similarity=0.113 Sum_probs=170.2
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.+|+++||+|||+ +.+++| ++++++. . ... ...++..+
T Consensus 25 ~~L~~eA~~~Al~DAgl---~~~dID----~~~~~~~-~-----------------------~~~-------~~~l~~~l 66 (386)
T PRK07855 25 LRLACEAVLAALDDAGL---APSDVD----GLVTFTM-D-----------------------TNP-------EIAVARAL 66 (386)
T ss_pred HHHHHHHHHHHHHHcCC---CHHHCC----EEEEecC-c-----------------------ccc-------HHHHHHHC
Confidence 37999999999999999 455666 4554321 0 000 12477788
Q ss_pred cCCC--CccccccccchHHHHHHHHHHHHHcCCCcEEEEecc--ccc---c---------------------------ch
Q 010896 237 GLMG--PNYSISTACATANYCFYAAANHIRRGETDIMVAGGT--EAA---I---------------------------IP 282 (498)
Q Consensus 237 gl~G--p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~--d~~---~---------------------------~p 282 (498)
|+++ |...|.++|+|+..+|..|+..|++|+||+|||.|. +.. . .|
T Consensus 67 Gl~~~~~~~~v~~gg~sg~~~~~~A~~~I~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 146 (386)
T PRK07855 67 GIGELKFFSRIHYGGGAACATVQQAAMAVATGVADVVVCYRAFNERSGMRFGQGQTGLAENPTSTGVDYGWSYPHGLLTP 146 (386)
T ss_pred CCCCCcceeeecCCcHHHHHHHHHHHHHHHCCCCCEEEEEeecccccccccccccccccccccccccchhhhhhcCCCCh
Confidence 9977 345789999999999999999999999999999887 211 0 00
Q ss_pred hhHHHHhhccccccC------------------CCCCCCC-----------------CCcCCCCCCCccccceeEEEEEc
Q 010896 283 TGVGGFIACRALSQR------------------NEYPKRA-----------------SRPWDKDRDGFVMGEGCGILVME 327 (498)
Q Consensus 283 ~~~~~~~~~~~ls~~------------------~~~p~~~-----------------~rpfd~~~~G~v~gEGaaavvLe 327 (498)
..++.+.....+..+ ..+|... +.|+.. -+...++|||+++||.
T Consensus 147 ~~~~al~a~~ym~~~G~t~e~lA~vavk~~~~A~~NP~A~~~~~~~t~e~vl~s~~Ia~Pl~~-~d~~~~sDGAaAvvl~ 225 (386)
T PRK07855 147 AAWVAMLARRYMHEYGATSEDFGRVAVADRKHAATNPKAWFYGRPITLEDHQNSRWIAEPLRL-LDCCQESDGAVALVVT 225 (386)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhcChHhhhcCCCCCHHHHhcCCcccCCchh-hhcCCcCCceEEEEEe
Confidence 000110000000000 0112111 122222 3445579999999999
Q ss_pred chHHHHhcCCcEEEEEEeEEEecCCCCCC-----CCCC-ChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHH
Q 010896 328 SLEHAMKRGANIIAEYLGGAVTCDAHHMT-----DPRS-DGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEV 401 (498)
Q Consensus 328 ~~~~A~~~g~~i~a~I~g~~~~~dg~~~~-----~p~~-~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~ 401 (498)
+++.|++.+.++ .+|+|++...+..... .++. .......+++++|++|||+++|||++|.|.+.|.. ..+..
T Consensus 226 see~A~~l~~~p-v~I~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~aa~~a~~~AGi~~~DiDv~El~D~Ft~~-~l~~~ 303 (386)
T PRK07855 226 SAERARDLKQRP-AVIKAAAQGSGADQYMMTSYYRDDITGLPEMGLVARQLWAQSGLGPADIDTAILYDHFTPF-VLMQL 303 (386)
T ss_pred cHHHHhhCCCCC-EEEEEEEEecCCccccccccccccccccchHHHHHHHHHHHcCCCHHHCcEEEeccCCcHH-HHHHH
Confidence 999998887665 5899998765433111 1111 12334579999999999999999999999887764 33333
Q ss_pred HHH--------HHHhcC-----CCccccc--ccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCC
Q 010896 402 NAI--------KKVFKD-----TSEMKMN--GTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVP 466 (498)
Q Consensus 402 ~al--------~~~f~~-----~~~~~v~--s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~ 466 (498)
++| .+.+.+ ...+|++ +.-...||+. |+.+++++++||+... .
T Consensus 304 E~lG~~~~Ge~~~~v~~G~~~~~G~lPvN~sGGll~~gh~~---G~~~i~E~~~QLrG~a-~------------------ 361 (386)
T PRK07855 304 EELGFCGRGEAKDFIADGALELGGRLPINTHGGQLGEAYIH---GMNGIAEAVRQLRGTS-V------------------ 361 (386)
T ss_pred HHcCCCCCCcHHHHHHCCCcccCCcccccCCCcccccCchh---hHHHHHHHHHHHhCCC-c------------------
Confidence 333 111111 2235553 3333368876 8999999999999841 0
Q ss_pred CcccccCccEEEEEccccccceeeEEE
Q 010896 467 NVKKQHHVNVAISNSFGFGGHNSVVVF 493 (498)
Q Consensus 467 ~~~~~~~~~~alv~s~G~gG~n~~~vl 493 (498)
.|..+.+++++++.|-. ..+++||
T Consensus 362 --~QV~~a~~gl~~~~Gg~-~~~~~~~ 385 (386)
T PRK07855 362 --NQVPGVENVLVTAGTGV-PTSGLIL 385 (386)
T ss_pred --ccCCCCcEEEEECCCCc-cceeEEe
Confidence 12234578888877633 3355665
|
|
| >KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.3e-19 Score=168.11 Aligned_cols=244 Identities=25% Similarity=0.385 Sum_probs=164.2
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
.++|.-.+.+.||+.+.++++ +.+.--.|.++....|..+.. +.+.-
T Consensus 30 A~~Lgsvaikaalera~v~~~---~v~eVi~GnVl~AnlGQapaR------------------------------Qaalg 76 (396)
T KOG1390|consen 30 ATELGSVAIKAALERAVVPPS---DVAEVIFGNVLSANLGQAPAR------------------------------QAALG 76 (396)
T ss_pred hhhHHHHHHHHHHHhcCCCHH---HhhhhhhccccccccCcchHH------------------------------HHHhh
Confidence 458999999999999988443 333222343443444433333 22222
Q ss_pred hcC--CCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhh-----------------------------
Q 010896 236 TGL--MGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTG----------------------------- 284 (498)
Q Consensus 236 lgl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~----------------------------- 284 (498)
-|| .=|+.||+--|+|++.|+.+|++.|+.|..|++++||.|.+.....
T Consensus 77 AGlp~sv~~tTvNkvCaSgmKAv~laaQsI~~G~~divVaGGmEsMS~vP~~~~~R~g~~~G~~~l~Dgi~~DGL~D~y~ 156 (396)
T KOG1390|consen 77 AGLPYSVPATTVNKVCASGMKAVILAAQSIQTGHADIVVAGGMESMSNVPYLYVARGGVKYGGVQLVDGIVKDGLTDAYD 156 (396)
T ss_pred cCCCcceeeEeehhhhhhhHHHHHHHHHHHhcCCccEEEecccchhccCcchhhhccCcCcCCeeeeechhhcchHHHhc
Confidence 232 2388999999999999999999999999999999999998522110
Q ss_pred --------------------------HHHHhhc------ccc-----------------ccCCCCCCC--------CCCc
Q 010896 285 --------------------------VGGFIAC------RAL-----------------SQRNEYPKR--------ASRP 307 (498)
Q Consensus 285 --------------------------~~~~~~~------~~l-----------------s~~~~~p~~--------~~rp 307 (498)
+..|.+. +.. -+.++.|.. ..||
T Consensus 157 ~~~MG~~aE~~a~~~~ItRe~QD~yAI~Sy~r~~~Aq~~g~f~~EIVPV~V~~~rg~~~v~~DEe~~k~~~~~~~~~l~~ 236 (396)
T KOG1390|consen 157 KCHMGICAENTAKKYQITREEQDAYAIESYKRSENAQKAGKFDKEIVPVEVKTKRGETVVKKDEEPKKGSNIEKLSKLRP 236 (396)
T ss_pred cCCcchhHhhhHHHhCCcHhhhhhHHHHhHHHHHHHHhcCCCCCceeeEEEecCCCcEEeccchhhhcccchhhhccccc
Confidence 0000000 000 000111111 1233
Q ss_pred CCCCCCCcc-------ccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCC
Q 010896 308 WDKDRDGFV-------MGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSP 380 (498)
Q Consensus 308 fd~~~~G~v-------~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~ 380 (498)
.-....|.+ +-|||+++||.+.+.+.+.|.+++|+|.+|+-.. ..|..-..+...++.++|++||+..
T Consensus 237 vF~~~ggTVTaaNAS~lnDGAAAvvL~s~e~~~~~glkPLArIv~~~dAa-----~~P~df~iaP~laipk~lk~aG~~~ 311 (396)
T KOG1390|consen 237 VFKEDGGTVTAANASTLNDGAAAVVLMSGEAAKELGLKPLARIVAWGDAA-----TEPIDFTIAPALAIPKALKKAGLEQ 311 (396)
T ss_pred eeecCCCeeccccccccCccceeeEEechhhHhHcCCchHHHHhhhhhhc-----cChhhcccchHHHHHHHHHHcCcch
Confidence 333333433 5699999999999999999999999999997654 1222222234678999999999999
Q ss_pred CCcCEEEccCCCCccCcHHHHHHHH--HHhc-CCCcccccccccccCCcchhhhHHHHHHHHHHhhc
Q 010896 381 EEVNYVNAHATSTLAGDLAEVNAIK--KVFK-DTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITT 444 (498)
Q Consensus 381 ~dId~i~~hgtgt~~~D~~E~~al~--~~f~-~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~ 444 (498)
+||||+|.. +.+-.-.|. +.++ +.+.+++.+..-.+||++|.||+.-+...+..|+.
T Consensus 312 sdVd~~EiN-------EAFs~v~lA~iK~LgldP~kVNv~GGAValGHPlG~SGaRi~~tL~~~L~~ 371 (396)
T KOG1390|consen 312 SDVDYWEIN-------EAFSVVVLANIKKLGLDPSKVNVHGGAVALGHPLGMSGARILVTLLHTLEQ 371 (396)
T ss_pred hhhhHHhhh-------hhhhHHHHHHHHHhCCCHhhccCCCceeecCCCcCCcchhHHHHHHHHHHh
Confidence 999999887 444433332 3333 24568888999999999999999999999998876
|
|
| >KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.5e-18 Score=159.59 Aligned_cols=277 Identities=20% Similarity=0.323 Sum_probs=184.8
Q ss_pred HHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhc
Q 010896 158 RYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTG 237 (498)
Q Consensus 158 ~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lg 237 (498)
.++-+|...||+|+++ .+++++..-+|-++|-+..+... -+.+|
T Consensus 31 d~a~ea~tkal~da~i---kys~vqqa~vgyvfgdstcgqra---------------------------------iyevg 74 (408)
T KOG1406|consen 31 DFAKEAITKALQDAGI---KYSEVQQAVVGYVFGDSTCGQRA---------------------------------IYEVG 74 (408)
T ss_pred hHHHHHHHHHHHhcCC---CHHHHHhhhheeeecCCccchHH---------------------------------HHhcc
Confidence 5788999999999999 77788878888888866544322 23568
Q ss_pred CCC-CccccccccchHHHHHHHHHHHHHcCCCcEEEEecccccc------------------------------chhhHH
Q 010896 238 LMG-PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAI------------------------------IPTGVG 286 (498)
Q Consensus 238 l~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~------------------------------~p~~~~ 286 (498)
++| |.+.|++.|+++..||.+|.+.|++|..|.+|+.|.|.+- .|+...
T Consensus 75 mtgipi~nvnnncatgssalflakqiiesgn~dcvlalgfekm~~gsl~~k~~dra~p~dkhi~~m~e~ygl~a~pmaaq 154 (408)
T KOG1406|consen 75 MTGIPIYNVNNNCATGSSALFLAKQIIESGNSDCVLALGFEKMERGSLSNKAADRALPVDKHISVMSETYGLEAAPMAAQ 154 (408)
T ss_pred ccCcceeeccCccccCchHHHHHHHHHhcCCcceEEeechhhhCCcccchhhhhccCcchhhHHHHHhhccCCCCcchHH
Confidence 888 9999999999999999999999999999999999999741 122211
Q ss_pred HHhhcc--ccccCCC------------CCCCCCCcCCCCCCCcc---------------------ccceeEEEEEcchHH
Q 010896 287 GFIACR--ALSQRNE------------YPKRASRPWDKDRDGFV---------------------MGEGCGILVMESLEH 331 (498)
Q Consensus 287 ~~~~~~--~ls~~~~------------~p~~~~rpfd~~~~G~v---------------------~gEGaaavvLe~~~~ 331 (498)
.|...+ .+.+++. ....-..|+++-++-|. .+||+++.||.++.-
T Consensus 155 mfgnagkehmekygtk~ehfakiawknhkhsvnnpysqf~deysldqvm~s~~v~dflt~lqccptsdgaaaailaseaf 234 (408)
T KOG1406|consen 155 MFGNAGKEHMEKYGTKPEHFAKIAWKNHKHSVNNPYSQFRDEYSLDQVMKSPQVVDFLTKLQCCPTSDGAAAAILASEAF 234 (408)
T ss_pred HhhhhHHHHHHHhCCCHHHHhHhhhhccccccCChhHhhhhhccHHHHhcchHHHHHHHHhhcCCCCCchHHHHHhHHHH
Confidence 111111 0111100 01112245554444333 589999999999888
Q ss_pred HHhcCCcEEE-EEEeEEEecCCCCCCCCC----CCh-HHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHH
Q 010896 332 AMKRGANIIA-EYLGGAVTCDAHHMTDPR----SDG-LGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIK 405 (498)
Q Consensus 332 A~~~g~~i~a-~I~g~~~~~dg~~~~~p~----~~~-~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~ 405 (498)
.++.|..-.| +|.|.-+..|--+..... -.| ...+.+.++.+++.|++|.||++||.|.+... ++.+-++||-
T Consensus 235 v~k~gl~~qaveivg~em~td~ps~faeks~ikm~gfdm~~~aa~~l~aksgltpndvqvielhdcfs~-nelityealg 313 (408)
T KOG1406|consen 235 VRKHGLEKQAVEIVGMEMATDPPSTFAEKSLIKMAGFDMTRLAAKRLFAKSGLTPNDVQVIELHDCFSA-NELITYEALG 313 (408)
T ss_pred HHhcccHHHHHHHHHHHhccCCchhhhhhhhhhhhcchHHHHHHHHHHHHcCCCcccceEEEeecccch-hhhhhHHHhc
Confidence 8777755433 466666655532111000 001 12356889999999999999999999988765 3677677763
Q ss_pred HH---------------hcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCccc
Q 010896 406 KV---------------FKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKK 470 (498)
Q Consensus 406 ~~---------------f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~ 470 (498)
-. |+..-.++-++....-||++||.|+++..+...+||... ..++
T Consensus 314 lcpegqg~~~vdrgdntyggkwvinpsggliskghplgatglaqcaelcwqlrg~a--------------------gkrq 373 (408)
T KOG1406|consen 314 LCPEGQGGEFVDRGDNTYGGKWVINPSGGLISKGHPLGATGLAQCAELCWQLRGLA--------------------GKRQ 373 (408)
T ss_pred CCCCCCCceeeecCCCccCceEEECCCCccccCCCcCccchHHHHHHHHHHHhhhh--------------------cccc
Confidence 21 111112333444455699999999999999999998732 2223
Q ss_pred ccCccEEEEEccccccceeeE
Q 010896 471 QHHVNVAISNSFGFGGHNSVV 491 (498)
Q Consensus 471 ~~~~~~alv~s~G~gG~n~~~ 491 (498)
..+.+.++-++.|.||.-...
T Consensus 374 vpnakvalqhnlgiggavvv~ 394 (408)
T KOG1406|consen 374 VPNAKVALQHNLGIGGAVVVA 394 (408)
T ss_pred CCCchhhhhhccCcCceeEEE
Confidence 334567777888888864433
|
|
| >PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.1e-17 Score=164.89 Aligned_cols=290 Identities=19% Similarity=0.254 Sum_probs=183.7
Q ss_pred CcEEEEeeceecCCC-CCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHH
Q 010896 86 KRIVITGMGLVSVFG-SDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAG 164 (498)
Q Consensus 86 ~~V~ItG~g~~~p~g-~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa 164 (498)
.+|.|+++|...|.- ...+++++.+......+. .+ .+ +....+..+. .....|+.+++
T Consensus 2 ~~v~I~ai~~~lP~~~~~~~~~~~~~~~~~~~i~--~~---~g-----------i~~r~~~~~~-----~~~~~la~~A~ 60 (319)
T PRK09352 2 MYAKILGTGSYLPERVVTNDDLEKMVDTSDEWIV--TR---TG-----------IKERRIAAPD-----ETTSDLATEAA 60 (319)
T ss_pred CceEEEEEEEECCCeEEcHHHHHHHcCCCHHHhh--hh---cC-----------eEEEEeCCCC-----CCHHHHHHHHH
Confidence 468999999999987 567777765421100000 00 00 1000000011 23468999999
Q ss_pred HHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCC-Ccc
Q 010896 165 RRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMG-PNY 243 (498)
Q Consensus 165 ~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~G-p~~ 243 (498)
++||+++|++ +++++ .+++|++... ......+.+|+..+|+++ |.+
T Consensus 61 ~~al~~agl~---~~~id----~vi~~~~~~~--------------------------~~~~~~~~~i~~~lG~~~~~~~ 107 (319)
T PRK09352 61 KKALEAAGID---PEDID----LIIVATTTPD--------------------------YAFPSTACLVQARLGAKNAAAF 107 (319)
T ss_pred HHHHHHcCCC---HHHCC----EEEEEcCCCC--------------------------CCCchHHHHHHHHhCCCCCcEe
Confidence 9999999994 44555 5777764211 001224678999999988 888
Q ss_pred ccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeEE
Q 010896 244 SISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGI 323 (498)
Q Consensus 244 tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaaa 323 (498)
++.++|+|++.||..|+++|++|++|.+||+|+|.+. .. .. ++....++++||||++
T Consensus 108 ~v~~~Casg~~al~~A~~~i~~g~~~~vLvv~~e~~s-~~---------------------~~-~~~~~~~~~~gDGaaA 164 (319)
T PRK09352 108 DLSAACSGFVYALSTADQFIRSGAYKNVLVIGAEKLS-RI---------------------VD-WTDRSTCVLFGDGAGA 164 (319)
T ss_pred eccccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhc-cc---------------------cC-cccCCceEEEeccceE
Confidence 9999999999999999999999999999999999721 10 01 1112346899999999
Q ss_pred EEEcchHHHHhcCCcEEEEEEeEEEecCCCC---CCCCC-------------CCh--------HHHHHHHHHHHHHcCCC
Q 010896 324 LVMESLEHAMKRGANIIAEYLGGAVTCDAHH---MTDPR-------------SDG--------LGVSSCIAKSLEDAGVS 379 (498)
Q Consensus 324 vvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~---~~~p~-------------~~~--------~~~~~~i~~Al~~Agl~ 379 (498)
+||++.+.. . +.++...+++.. ...|. ..+ ..+.++++++|+++|++
T Consensus 165 ~ll~~~~~~-----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~ 235 (319)
T PRK09352 165 VVLGASEEP-----G----ILSTHLGSDGSYGDLLYLPGGGSRGPASPGYLRMEGREVFKFAVRELAKVAREALEAAGLT 235 (319)
T ss_pred EEEEEcCCC-----C----eEEEEEEEcCCCCCeEEeCCCCCCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999975431 1 222222222221 00010 011 23456899999999999
Q ss_pred CCCcCEEEccCCCCccCcHHHHHHHHHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCC
Q 010896 380 PEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPE 459 (498)
Q Consensus 380 ~~dId~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~ 459 (498)
++||+|+..|..+....+ .+.+.++-. .-.+......+||+.+|+-.+.|..++ +.|.+
T Consensus 236 ~~di~~~~~h~~~~~~~~-----~~~~~lg~~-~~~~~~~~~~~Gn~~~a~~~~~L~~~~---~~g~~------------ 294 (319)
T PRK09352 236 PEDIDWLVPHQANLRIID-----ATAKKLGLP-MEKVVVTVDKYGNTSAASIPLALDEAV---RDGRI------------ 294 (319)
T ss_pred HHHCCEEEECCCCHHHHH-----HHHHHhCCC-HHHhhhhHHhhCCHHHHHHHHHHHHHH---HcCCC------------
Confidence 999999999966544322 334444321 111223346799999888777776544 33322
Q ss_pred CCcCcCCCcccccCccEEEEEccccccceeeEEEe
Q 010896 460 VTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494 (498)
Q Consensus 460 ~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~ 494 (498)
.+.+.+++-+||.|-+-.+++|+
T Consensus 295 ------------~~Gd~vll~s~G~G~~~~~~ll~ 317 (319)
T PRK09352 295 ------------KRGDLVLLEGFGGGLTWGAALVR 317 (319)
T ss_pred ------------CCCCEEEEEEEchhheeEEEEEE
Confidence 12356778899999888888876
|
|
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.5e-16 Score=160.70 Aligned_cols=266 Identities=17% Similarity=0.141 Sum_probs=164.5
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccch-hhhhhHHHHHHh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYS-ITNMGSALLAID 235 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~n~~a~~ia~~ 235 (498)
..|+.+++++||+|||+ +++++| +++.+.. +. +... +.. ..+...
T Consensus 25 ~el~~eA~~~Al~DAgl---~~~dID----~~~~~~~--~~----------------------~~~~~~~~---~~~~~~ 70 (352)
T PRK07937 25 VEMLMPCFAELYAELGI---TKSDIG----FWCSGSS--DY----------------------LAGRAFSF---ISAIDS 70 (352)
T ss_pred HHHHHHHHHHHHHHcCC---CHHHCC----EEEEEcc--cc----------------------ccccccch---hhHHhh
Confidence 47999999999999999 455666 4543321 00 0000 000 112334
Q ss_pred hcCC-C-CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-----------------hh-----hHHHHhhc
Q 010896 236 TGLM-G-PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-----------------PT-----GVGGFIAC 291 (498)
Q Consensus 236 lgl~-G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-----------------p~-----~~~~~~~~ 291 (498)
+|+. + |...+. +++..||..|+..|++|.+|.+||.|.+.+.. |. .+..+...
T Consensus 71 ~G~~~~~~~~~v~---~~g~~a~~~A~~aI~sG~~d~VLv~g~~k~~~~~~~~~~~~~~~~~~~~p~G~~~~~~~Al~a~ 147 (352)
T PRK07937 71 IGAVPPINESHVE---MDAAWALYEAWVKLLTGEVDTALVYGFGKSSAGTLRRVLALQLDPYTVAPLWPDSVSMAGLQAR 147 (352)
T ss_pred ccCCCCCceEEec---CcHHHHHHHHHHHHhcCCCCEEEEEEecccCccchhhhhhccCCcceeccCCCchHHHHHHHHH
Confidence 5653 2 333344 47888999999999999999999999885310 11 00111111
Q ss_pred cccccCC------------------CCCCCCC--------------CcCCCCCCCccccceeEEEEEcchHHHHhcCCcE
Q 010896 292 RALSQRN------------------EYPKRAS--------------RPWDKDRDGFVMGEGCGILVMESLEHAMKRGANI 339 (498)
Q Consensus 292 ~~ls~~~------------------~~p~~~~--------------rpfd~~~~G~v~gEGaaavvLe~~~~A~~~g~~i 339 (498)
+.+..++ ..|.... -|+.. -+...++||++++||.+.+.|++.+.++
T Consensus 148 ~ym~~yG~t~e~lA~vavk~r~nA~~NP~A~~rit~edvl~s~~ia~PL~l-~d~~~~~DGAaA~vl~s~~~A~~l~~~p 226 (352)
T PRK07937 148 AGLDAGKWTEEQMAEVAARSRADARRNPSAEPSISVDELLARPYFADPLRR-HDIAPITDGAAAVVLAAGDRARELRERP 226 (352)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHhhCchhhccCCHHHHhcCCcccCCchh-hcCCCCCCcceEEEEecHHHHHHcCCCc
Confidence 1111111 1121111 12211 2344579999999999999999988777
Q ss_pred EEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHH-cCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcCCCcccccc
Q 010896 340 IAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLED-AGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNG 418 (498)
Q Consensus 340 ~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~-Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~v~s 418 (498)
++|+|++...+.......+.. ...++++++++ ||++|+|||++|.|.+.+.. ..+..++|. |.+..+++.++
T Consensus 227 -v~I~g~~~~~~~~~~~~~d~~---~~~~~~~a~~~aAgi~~~diD~~Ei~D~F~~~-~l~~~e~lG--l~g~~pvN~~G 299 (352)
T PRK07937 227 -AWITGIEHRIESPSLGARDLT---RSPSTALAAEAATGGDAGGVDVAELHAPFTHQ-ELILREALG--LGDKTKVNPSG 299 (352)
T ss_pred -EEEEEEEEeeCCccccccccc---cHHHHHHHHHHhcCCCHHHCCEEEEeCCChHH-HHHHHHHcC--CCCCCCcCCCc
Confidence 899999887665432211111 12345556666 59999999999999777654 233333322 22334666665
Q ss_pred cccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEcccc--ccceeeEEEee
Q 010896 419 TKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGF--GGHNSVVVFAP 495 (498)
Q Consensus 419 ~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~--gG~n~~~vl~~ 495 (498)
.-.. ||+.+|+|+..++++++||+.+ ..+++++++.|- +.+++.+|++.
T Consensus 300 G~l~-ghp~gatG~~~~~e~~~QL~g~---------------------------~a~~~l~~~~Gg~~~~~~~v~v~~~ 350 (352)
T PRK07937 300 GALA-ANPMFAAGLERIGEAARHIWDG---------------------------SARRALAHATSGPALQQNLVAVLEG 350 (352)
T ss_pred cchh-cCchhHHHHHHHHHHHHHHhcc---------------------------CCCEEEEecccccccceEEEEEEec
Confidence 5444 9999999999999999999884 247788888773 34566666654
|
|
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.2e-16 Score=168.36 Aligned_cols=277 Identities=18% Similarity=0.160 Sum_probs=180.2
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.+|+++||+|||++. -++++| +++++..... . .+.....++..+
T Consensus 28 ~~L~~eA~~~Al~DAGl~~-~~~dID----~v~v~~~~~~------------------------~---~~~~~~~la~~l 75 (498)
T PRK08257 28 VDLMAAAARAAAADAGADA-VLEAID----SVAVVNQLSW------------------------R---YRDPPGLLAERL 75 (498)
T ss_pred HHHHHHHHHHHHHhcCCCc-CHHHCC----EEEEeccccc------------------------c---ccCHHHHHHHHc
Confidence 4799999999999999930 055666 5666642110 0 011235688888
Q ss_pred cCCC-CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchh--------------------------------
Q 010896 237 GLMG-PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPT-------------------------------- 283 (498)
Q Consensus 237 gl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~-------------------------------- 283 (498)
|++. +.....++|+|+..+|..|++.|++|++|+|||+|+|.+.+..
T Consensus 76 Gl~p~~~~~~~~GG~s~~~~v~~Aa~~IasG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (498)
T PRK08257 76 GADPARTVYSPVGGNSPQRLVNEAALRIAAGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMASP 155 (498)
T ss_pred CCCCcceeEecCCCHHHHHHHHHHHHHHHCCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccch
Confidence 9864 3444567788889999999999999999999999998632110
Q ss_pred -----------hHHHH-----------------hhccccc-c--C--CCCCC--------------------CCCCcCCC
Q 010896 284 -----------GVGGF-----------------IACRALS-Q--R--NEYPK--------------------RASRPWDK 310 (498)
Q Consensus 284 -----------~~~~~-----------------~~~~~ls-~--~--~~~p~--------------------~~~rpfd~ 310 (498)
.++.+ ..+..+. + + ..+|. --+-||..
T Consensus 156 ~e~~~G~~~p~~~yal~a~ay~~~~G~t~e~~~a~~a~l~~~~~~~Aa~NP~A~~r~~~t~eevl~~~~~~rmIa~Pl~~ 235 (498)
T PRK08257 156 AELRHGLDRPVYVYPLFENALRAALGRSPEEHRAEMGELWAPFSAVAAKNPHAWIPRERSAEEIVTPTPDNRMIAWPYTK 235 (498)
T ss_pred hhhhcCCCCcchHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhhCHHHhhCCCCCHHHHhcccCCCCeeeCCccH
Confidence 00000 0000000 0 0 00110 01123332
Q ss_pred CCCCccccceeEEEEEcchHHHHhcCC--cEEEEEEeEEEecCCCCCC-CCCC-ChHHHHHHHHHHHHHcCCCCCCcCEE
Q 010896 311 DRDGFVMGEGCGILVMESLEHAMKRGA--NIIAEYLGGAVTCDAHHMT-DPRS-DGLGVSSCIAKSLEDAGVSPEEVNYV 386 (498)
Q Consensus 311 ~~~G~v~gEGaaavvLe~~~~A~~~g~--~i~a~I~g~~~~~dg~~~~-~p~~-~~~~~~~~i~~Al~~Agl~~~dId~i 386 (498)
--......||++++||.+++.|++.+. .-...|.|++..+|..... .++. .......+.+++|++|||+++|||++
T Consensus 236 ldca~~~~DGaaAvil~S~e~A~~l~~~~~~~V~i~g~a~~~~~~~~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~ 315 (498)
T PRK08257 236 LMNANDMVDQGAAVLLTSVAKARRLGVPEDRWVYLHGGADAHDPYDILERPDLHRSPAIRAAGRRALALAGLGIDDIDAF 315 (498)
T ss_pred hhcCCCCcccceEEEEeeHHHHHhcCCCCCceEEEEEEEEeeCccccccccccccChHHHHHHHHHHHHhCCCHHHCCEE
Confidence 111123689999999999999998872 2246689998887754322 2221 23344579999999999999999999
Q ss_pred EccCCCCccCcHHHHHHHHHH-hcC--CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcC
Q 010896 387 NAHATSTLAGDLAEVNAIKKV-FKD--TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTID 463 (498)
Q Consensus 387 ~~hgtgt~~~D~~E~~al~~~-f~~--~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~ 463 (498)
|.|.+.+.. |...+..+ |.. ..++++++.-...||+.++.|+.+++.++.+|+.+
T Consensus 316 elydcF~~~----~~~~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLRg~------------------ 373 (498)
T PRK08257 316 DLYSCFPSA----VQVAARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTHAIAEMVERLRAN------------------ 373 (498)
T ss_pred EeccCCHHH----HHHHHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHHHHHHHHHHHhhc------------------
Confidence 999777654 33444333 222 23677888888889999999999999999999873
Q ss_pred cCCCcccccCccEEEEEccc-cccceeeEEEeeC
Q 010896 464 TVPNVKKQHHVNVAISNSFG-FGGHNSVVVFAPF 496 (498)
Q Consensus 464 ~v~~~~~~~~~~~alv~s~G-~gG~n~~~vl~~~ 496 (498)
..+++|+++.| ++..++..|+++-
T Consensus 374 ---------~~~~gLv~~~GG~~~~~~~~vl~~~ 398 (498)
T PRK08257 374 ---------PGRRGLVTANGGYLTKHSVGVYSTE 398 (498)
T ss_pred ---------CCCEEEEECCCChhhceEEEEEeCC
Confidence 13578888776 4444555566653
|
|
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.2e-16 Score=153.28 Aligned_cols=242 Identities=24% Similarity=0.364 Sum_probs=161.7
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+.+|+++||++||++ ++++| -+++.++ .|..+.+..|..|...
T Consensus 52 ~s~la~~Aa~~AL~~Agi~---~~dID----lII~aT~--------------------------tpd~~~Ps~A~~vq~~ 98 (323)
T COG0332 52 TSDLAVEAARKALEDAGIS---PDDID----LIIVATS--------------------------TPDHLFPSTACLVQAR 98 (323)
T ss_pred HHHHHHHHHHHHHHHcCCC---HHHCC----EEEEEcC--------------------------CcccCCChHHHHHHHH
Confidence 5689999999999999994 44555 3555552 2333456788999999
Q ss_pred hcCCC-CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCC
Q 010896 236 TGLMG-PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDG 314 (498)
Q Consensus 236 lgl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G 314 (498)
||+++ +.+.+..+|++.+.||..|.++|++|.++.+||.|.|.. |+ .--|+++...
T Consensus 99 LG~~~~~afDl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~~---------------S~--------~ld~~dR~t~ 155 (323)
T COG0332 99 LGLGGAPAFDLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETL---------------SR--------ILDWTDRDTC 155 (323)
T ss_pred hCCCCcceeechhhhHHHHHHHHHHHHHHHcCCCCEEEEEehhHh---------------hc--------cCCHhhccce
Confidence 99998 899999999999999999999999999999999999962 11 0112333577
Q ss_pred ccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCC---CCC----------------CCCCh--------HHHHH
Q 010896 315 FVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHH---MTD----------------PRSDG--------LGVSS 367 (498)
Q Consensus 315 ~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~---~~~----------------p~~~~--------~~~~~ 367 (498)
+.+||||+|+||++.+ .+. . |..+...+|+.. +.. ..-+| ..+..
T Consensus 156 vlFgDGAgAvvl~~~~--~~~--~----i~~~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk~av~~~~~ 227 (323)
T COG0332 156 VLFGDGAGAVVLEATE--DDN--G----ILDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFKFAVRAMPK 227 (323)
T ss_pred EEEcCCceEEEEecCC--CCc--C----eeeeeeeccccCCCeeeccCCCCccccccccccceeeccHHHHHHHHHHHHH
Confidence 9999999999999865 111 1 222222222221 000 00122 24567
Q ss_pred HHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCcc
Q 010896 368 CIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWL 447 (498)
Q Consensus 368 ~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~i 447 (498)
+++++|++++++++|||++..|-..... .+++.+.++- ..-.+...--.+|++-+||=-+.|.++ ++.|.|
T Consensus 228 ~~~~~L~~~~l~~~dId~~vpHQan~ri-----~~~i~~~l~~-~~~k~~~~~~~yGNtsaAsiplaL~~~---~~~g~i 298 (323)
T COG0332 228 AIEEVLEKAGLTPEDIDWFVPHQANLRI-----IEAIAKKLGI-PEEKVVVTVDKYGNTSAASIPLALDEA---LREGRI 298 (323)
T ss_pred HHHHHHHHcCCCHHHCCEEccccccHHH-----HHHHHHHcCC-CHHHHhhHHHHhcccccchHHHHHHHH---hhhCCC
Confidence 8999999999999999999999443222 2334444443 111233334457888887755555443 344333
Q ss_pred CCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEe
Q 010896 448 HPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494 (498)
Q Consensus 448 pp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~ 494 (498)
- +-...++..||-|=+-.+++++
T Consensus 299 k------------------------~Gd~ill~~fG~Gltwg~~~~r 321 (323)
T COG0332 299 K------------------------PGDLVLLEAFGGGLTWGAALVR 321 (323)
T ss_pred C------------------------CCCEEEEEeecCcceeeeEEEE
Confidence 1 2256677788877666677665
|
|
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.1e-16 Score=160.02 Aligned_cols=238 Identities=16% Similarity=0.155 Sum_probs=151.9
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+.+|+++||+++|+ +++++| .+++++..+. ......+.+|...
T Consensus 63 ~~~La~~A~~~aL~~agi---~~~dId----~li~~s~~~~--------------------------~~~p~~a~~v~~~ 109 (378)
T PRK06816 63 NAQMAAEAIRDLLDDAGF---SLGDIE----LLACGTSQPD--------------------------QLMPGHASMVHGE 109 (378)
T ss_pred HHHHHHHHHHHHHHHcCC---CHHHCC----EEEEEECCCC--------------------------cCChHHHHHHHhh
Confidence 568999999999999999 444555 4667663211 1112234678888
Q ss_pred hcCCC-CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhh-ccccccCCCCCCCCCCcCCCCCC
Q 010896 236 TGLMG-PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIA-CRALSQRNEYPKRASRPWDKDRD 313 (498)
Q Consensus 236 lgl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~-~~~ls~~~~~p~~~~rpfd~~~~ 313 (498)
+|++. |.+.|+.+|+|++.||+.|.++|++|.++.+||+|+|.+........|.. .+.+.. .++..++||+.+..
T Consensus 110 Lgl~~~~~~~v~~~Cas~~~al~~A~~~i~sg~~~~vLvv~~E~~s~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 186 (378)
T PRK06816 110 LGAPPIEVVSSAGVCAAGMMALKYAYLSVKAGESRNAVATASELASRWFRASRFEAEEEKLAE---LEENPEIAFEKDFL 186 (378)
T ss_pred CCCCCCceeeecCcCHHHHHHHHHHHHHHHCCCCCEEEEEeEccchhhhhhhhhhhHHHHhhc---CcccCCCCCCCCCC
Confidence 89876 78899999999999999999999999999999999997543332222221 222322 12345689999999
Q ss_pred CccccceeEEEEEcchHHHHhcCCc--EEEEEEe-EEEec------------CCCCCC----CCC-----------CChH
Q 010896 314 GFVMGEGCGILVMESLEHAMKRGAN--IIAEYLG-GAVTC------------DAHHMT----DPR-----------SDGL 363 (498)
Q Consensus 314 G~v~gEGaaavvLe~~~~A~~~g~~--i~a~I~g-~~~~~------------dg~~~~----~p~-----------~~~~ 363 (498)
|+++||||+|+||++.+.. .|.. +.....+ ..... ++.... .+. .++.
T Consensus 187 ~~~fGDGA~A~vl~~~~~~--~g~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (378)
T PRK06816 187 RWMLSDGAGAVLLENKPRP--DGLSLRIDWIDLRSYAGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASALSLKQDVR 264 (378)
T ss_pred CEeeecccEEEEEEecCCC--CCceEEEEEEeeecccccCccceecCCccCCCCCccCcccCCHHHHHhccCchHHhHHH
Confidence 9999999999999864431 1221 1110000 00000 000000 000 0122
Q ss_pred HH--------HHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHh-----cC-CCcccccccccccCCcchh
Q 010896 364 GV--------SSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVF-----KD-TSEMKMNGTKSMIGHGLGA 429 (498)
Q Consensus 364 ~~--------~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f-----~~-~~~~~v~s~K~~~Gh~~~A 429 (498)
.+ ...++++|+++|++++|||++..|-......+. +.+.+ += ..++. ..-..+||+.+|
T Consensus 265 ~~~~~~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq~n~~~~~~-----v~~~l~~~~~gl~~~k~~--~~~~~~GNt~sA 337 (378)
T PRK06816 265 LLNENIVVYTIKPLLELVDKRNLDPDDIDYFLPHYSSEYFREK-----IVELLAKAGFMIPEEKWF--TNLATVGNTGSA 337 (378)
T ss_pred HHHHHhHHHHHHHHHHHHHHcCCChhhCCEEeeCcccHHHHHH-----HHHHHHhccCCCChhheE--Eeccccccccch
Confidence 22 667889999999999999999999766554332 33332 21 11222 334579999999
Q ss_pred hhHHHHHHH
Q 010896 430 AGGLEAITT 438 (498)
Q Consensus 430 aG~~~li~a 438 (498)
+-.+.|..+
T Consensus 338 sipi~L~~a 346 (378)
T PRK06816 338 SIYIMLDEL 346 (378)
T ss_pred HHHHHHHHH
Confidence 877766554
|
|
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.3e-16 Score=155.33 Aligned_cols=289 Identities=18% Similarity=0.241 Sum_probs=181.3
Q ss_pred cEEEEeeceecCCC-CCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHHH
Q 010896 87 RIVITGMGLVSVFG-SDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGR 165 (498)
Q Consensus 87 ~V~ItG~g~~~p~g-~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa~ 165 (498)
.+.|.++|..+|.- .+.+++.+.+......+ ++..+ +....+..+. .....|+.+|++
T Consensus 2 ~~~I~~i~~~~P~~~~~~~~~~~~~~~~~~~i-----~~~~g-----------i~~r~~~~~~-----~~~~~la~~A~~ 60 (318)
T TIGR00747 2 YAGILGTGSYLPEKVLTNADLEKMVDTSDEWI-----VTRTG-----------IKERRIAADD-----ETSSTMGFEAAK 60 (318)
T ss_pred CCEEEEEEEECCCceecHHHHHHhcCCchHHe-----ecccC-----------ceEEEECCCC-----CCHHHHHHHHHH
Confidence 37899999999986 56777776543110000 00000 0000000111 124589999999
Q ss_pred HHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCC-Cccc
Q 010896 166 RALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMG-PNYS 244 (498)
Q Consensus 166 ~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~G-p~~t 244 (498)
+||+++|++ +++++ .+++++.... ......+.+++..+|+++ |.+.
T Consensus 61 ~al~~agl~---~~~Id----~~i~~~~~~~--------------------------~~~~~~a~~l~~~lGl~~~~~~~ 107 (318)
T TIGR00747 61 RAIENAGIS---KDDID----LIIVATTTPD--------------------------HAFPSAACMVQAYLGIKGIPAFD 107 (318)
T ss_pred HHHHHcCCC---HHHCC----EEEEECCCCC--------------------------CCCChHHHHHHHHhCCCCCcEee
Confidence 999999994 44555 5666653211 111234678999999998 8899
Q ss_pred cccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeEEE
Q 010896 245 ISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324 (498)
Q Consensus 245 v~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaaav 324 (498)
|..+|+|++.||..|+.+|++|.++.+||+|+|..... .++.+ ....+++||||+++
T Consensus 108 v~~~C~s~~~al~~A~~~i~~g~~~~~Lvv~~e~~~~~----------------------~~~~~-~~~~~~~GDGAaA~ 164 (318)
T TIGR00747 108 LSAACAGFIYALSVAKQYIESGKYKTVLVVGAEKLSST----------------------LDWTD-RGTCVLFGDGAGAV 164 (318)
T ss_pred hhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCc----------------------CCcCC-CCeEEEEecceeEE
Confidence 99999999999999999999999999999999963211 01111 12357899999999
Q ss_pred EEcchHHHHhcCCcEEEEEEeEEEecCCC---CCCCC-------CC--------------ChHHHHHHHHHHHHHcCCCC
Q 010896 325 VMESLEHAMKRGANIIAEYLGGAVTCDAH---HMTDP-------RS--------------DGLGVSSCIAKSLEDAGVSP 380 (498)
Q Consensus 325 vLe~~~~A~~~g~~i~a~I~g~~~~~dg~---~~~~p-------~~--------------~~~~~~~~i~~Al~~Agl~~ 380 (498)
||++.+.. + . |.......++. ....| .. ....+.++++++|+++|+++
T Consensus 165 lL~~~~~~---~-~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 236 (318)
T TIGR00747 165 VLGESEDP---G-G----IISTHLGADGTQGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVEETLEANGLDP 236 (318)
T ss_pred EEeecCCC---C-c----EEEEEEEEcCCCcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 99874431 1 1 22222222221 01001 00 01234567899999999999
Q ss_pred CCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCC
Q 010896 381 EEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPE 459 (498)
Q Consensus 381 ~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~ 459 (498)
+||+++.+|..+.+.-+ .+.+.++- ..++. ..-..+||+.+|+=.+.|..++ +++.+.
T Consensus 237 ~di~~~~~h~~~~~~~~-----~~~~~lgi~~~k~~--~~~~~~Gn~~sas~~~~L~~~~---~~~~~~----------- 295 (318)
T TIGR00747 237 EDIDWFVPHQANLRIIE-----ALAKRLELDMSQVV--KTVHKYGNTSAASIPLALDELL---RTGRIK----------- 295 (318)
T ss_pred HHCCEEEECCCCHHHHH-----HHHHHcCCCHHHee--ehHhhhCCHHHHHHHHHHHHHH---HcCCCC-----------
Confidence 99999999987655433 23444442 11222 2234499999988777765543 333321
Q ss_pred CCcCcCCCcccccCccEEEEEccccccceeeEEEe
Q 010896 460 VTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494 (498)
Q Consensus 460 ~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~ 494 (498)
+.+++++-+||.|.+..+++|+
T Consensus 296 -------------~Gd~vll~~~G~G~t~~~~~l~ 317 (318)
T TIGR00747 296 -------------PGDLLLLVAFGGGLTWGAALVR 317 (318)
T ss_pred -------------CCCEEEEEEEehhheeeEEEEE
Confidence 2256777899999998888875
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.5e-15 Score=153.01 Aligned_cols=290 Identities=17% Similarity=0.219 Sum_probs=179.7
Q ss_pred CcEEEEeeceecCCC-CCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHH
Q 010896 86 KRIVITGMGLVSVFG-SDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAG 164 (498)
Q Consensus 86 ~~V~ItG~g~~~p~g-~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa 164 (498)
.++.|.|+|...|.- .+.+++.+.+......+ ++..+ +....+..+. .....|+.+|+
T Consensus 3 ~~~~I~~ig~~~P~~~v~~~e~~~~~~~~~~~i-----~~~~G-----------i~~r~~~~~~-----~~~~~la~~A~ 61 (325)
T PRK12879 3 SYARITGIGTYVPPRVLTNDDLETFIDTSDEWI-----VQRTG-----------IKERRIAHVE-----EYTSDLAIKAA 61 (325)
T ss_pred CCCEEEEEEEECCCcEEcHHHHHHhcCCCHHHh-----hhccC-----------ceEEEECCCC-----CCHHHHHHHHH
Confidence 358899999999987 56666655321000000 00000 0000011111 12468999999
Q ss_pred HHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCC-Ccc
Q 010896 165 RRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMG-PNY 243 (498)
Q Consensus 165 ~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~G-p~~ 243 (498)
++||+++|++ ++++| .+++++.... ......+.+++..||++. +.+
T Consensus 62 ~~al~~ag~~---~~~Id----~li~~~~~~~--------------------------~~~~~~a~~l~~~lg~~~~~~~ 108 (325)
T PRK12879 62 ERALARAGLD---AEDID----LIIVATTTPD--------------------------YLFPSTASQVQARLGIPNAAAF 108 (325)
T ss_pred HHHHHHcCCC---HHHCC----EEEEEcCCCC--------------------------CCCChHHHHHHHHhCCCCCcEE
Confidence 9999999994 44454 4666653211 112335678899999974 888
Q ss_pred ccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeEE
Q 010896 244 SISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGI 323 (498)
Q Consensus 244 tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaaa 323 (498)
.++.+|++++.||..|.++|++|+++.+||+++|.+... ..++.....+++||||+|
T Consensus 109 ~v~~~C~~~~~al~~A~~~l~~g~~~~~Lvv~~e~~s~~-----------------------~~~~~~~~~~~~GDgAaA 165 (325)
T PRK12879 109 DINAACAGFLYGLETANGLITSGLYKKVLVIGAERLSKV-----------------------TDYTDRTTCILFGDGAGA 165 (325)
T ss_pred EECccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCc-----------------------CCccccCceEEEeecceE
Confidence 899999999999999999999999999999999962100 011112345789999999
Q ss_pred EEEcchHHHHhcCCcEEEEEEeEEEecCCC----------CCCCC----------CCCh--------HHHHHHHHHHHHH
Q 010896 324 LVMESLEHAMKRGANIIAEYLGGAVTCDAH----------HMTDP----------RSDG--------LGVSSCIAKSLED 375 (498)
Q Consensus 324 vvLe~~~~A~~~g~~i~a~I~g~~~~~dg~----------~~~~p----------~~~~--------~~~~~~i~~Al~~ 375 (498)
+||++.+. +..+.. ....+++. ....+ ..++ ..+.++++++|++
T Consensus 166 ~ll~~~~~----~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~ 237 (325)
T PRK12879 166 VVLEATEN----EPGFID----YVLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQVLEK 237 (325)
T ss_pred EEEEecCC----CCCeEE----EEEEEcCCCCCeEEEcCCCCCCCccccccCccEEEcCHHHHHHHHHHHHHHHHHHHHH
Confidence 99997542 112211 11111110 00000 0111 2245688999999
Q ss_pred cCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCC
Q 010896 376 AGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQD 454 (498)
Q Consensus 376 Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~ 454 (498)
+|++++|||++.+|..+... .+.+.+.++- ..++.. ....+||+.+|+=.+.|..+ ++.|.+.
T Consensus 238 ~g~~~~did~~~~h~~~~~~-----~~~~~~~lg~~~~~~~~--~~~~~Gn~~sas~~~~L~~~---~~~g~~~------ 301 (325)
T PRK12879 238 AGLTKDDIDWVIPHQANLRI-----IESLCEKLGIPMEKTLV--SVEYYGNTSAATIPLALDLA---LEQGKIK------ 301 (325)
T ss_pred cCCCHHHCCEEEECCCCHHH-----HHHHHHHcCCCHHHhhh--hHhhhCchHHHHHHHHHHHH---HHcCCCC------
Confidence 99999999999999655333 3345555543 112222 45789999988876666544 3443321
Q ss_pred CCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEe
Q 010896 455 NLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494 (498)
Q Consensus 455 ~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~ 494 (498)
+.+++++-+||.|-+-.+++++
T Consensus 302 ------------------~Gd~vll~~~G~G~~~~~~l~~ 323 (325)
T PRK12879 302 ------------------PGDTLLLYGFGAGLTWAALLVK 323 (325)
T ss_pred ------------------CCCEEEEEEEchhhhhEEEEEE
Confidence 2256777899999988888876
|
|
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.9e-15 Score=153.11 Aligned_cols=313 Identities=17% Similarity=0.166 Sum_probs=189.3
Q ss_pred CcEEEEeeceecCCC-CCHHHHHHHHHcCC--CCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHH
Q 010896 86 KRIVITGMGLVSVFG-SDIDKFYNKLLEGE--SGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLV 162 (498)
Q Consensus 86 ~~V~ItG~g~~~p~g-~~~~~~~~~L~~g~--~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~ 162 (498)
+.|.|+|+|...|.- .+.+++.+.+.+.. ..+.+ .++. +.. +.....+..+. .....|+.+
T Consensus 4 ~~v~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~~-~~i~------~~~----Gi~~R~~~~~~-----~~~~~la~~ 67 (338)
T PRK09258 4 SNVAILSLAYELAPVVVTSSEIEERLAPLYERLRLPP-GQLE------ALT----GIRERRWWPEG-----TQLSDGAIA 67 (338)
T ss_pred cceEEEEEEecCCCccCcHHHHHHHhhhcccccCCCh-hHhh------hhc----CceeEecCCCC-----CCHHHHHHH
Confidence 458999999999987 45566665443211 11110 0000 000 00000111111 124589999
Q ss_pred HHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCC--
Q 010896 163 AGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMG-- 240 (498)
Q Consensus 163 aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~G-- 240 (498)
|+++||+++|+ .+++++ .+++++.. +.......+.+++..+|++.
T Consensus 68 Aa~~aL~~ag~---~~~~Id----~li~~s~~--------------------------~~~~~p~~a~~v~~~lgl~~~~ 114 (338)
T PRK09258 68 AGRKALAEAGI---DPSDIG----LLINTSVC--------------------------RDYLEPATACRVHHNLGLPKSC 114 (338)
T ss_pred HHHHHHHHcCC---CHHHCC----EEEEEcCC--------------------------CCCCCChHHHHHHHHcCCCCCC
Confidence 99999999999 445555 46666531 11222346778999999974
Q ss_pred CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccce
Q 010896 241 PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEG 320 (498)
Q Consensus 241 p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEG 320 (498)
+.+.|.++|+|++.||+.|..+|++|.++.+||++.|.. +...-..+..+. . +.....+|+.....+.+|||
T Consensus 115 ~~~~v~~~C~~~~~al~~A~~~i~~g~~~~~Lvv~~e~~-s~~~~~~~~~~~--~-----~~~~~~~~~~~~~~~~~GDG 186 (338)
T PRK09258 115 ANFDVSNACLGFLNGMLDAANMIELGQIDYALVVSGESA-REIVEATIDRLL--A-----PETTREDFAQSFATLTLGSG 186 (338)
T ss_pred ceeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEeccc-chhccchhhhhc--c-----CccchhhhhhccceEEeccc
Confidence 678899999999999999999999999999999999973 221111111111 1 11122467776778899999
Q ss_pred eEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCC--CCC-----CCCh--------HHHHHHHHHHHHHcCCCCCCcCE
Q 010896 321 CGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHM--TDP-----RSDG--------LGVSSCIAKSLEDAGVSPEEVNY 385 (498)
Q Consensus 321 aaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~--~~p-----~~~~--------~~~~~~i~~Al~~Agl~~~dId~ 385 (498)
|+|+||++.+. ...+. .+.+.....++.+. ... ..++ ....++++++|+++|++++|||+
T Consensus 187 A~A~ll~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~did~ 261 (338)
T PRK09258 187 AAAAVLTRGSL-HPRGH----RLLGGVTRAATEHHELCQGGRDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWAVEQVDR 261 (338)
T ss_pred ceEEEEecCCC-CCCcc----eeeeeeeecCCCcccccccCccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCE
Confidence 99999997442 11122 24443333333211 000 1122 23345889999999999999999
Q ss_pred EEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCc
Q 010896 386 VNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDT 464 (498)
Q Consensus 386 i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~ 464 (498)
+..|..+.+..+ .+.+.++- ..++.. .. ..+||+.+|+=.+.|..++ +.|.+
T Consensus 262 ~i~H~~~~~~~~-----~~~~~lgl~~~k~~~-~~-~~~GN~~sas~~~~L~~~~---~~g~~----------------- 314 (338)
T PRK09258 262 VICHQVGAAHTR-----AILKALGIDPEKVFT-TF-PTLGNMGPASLPITLAMAA---EEGFL----------------- 314 (338)
T ss_pred EecCCCCHHHHH-----HHHHHhCCCHHHcee-hH-hhhCCcHHhHHHHHHHHHH---HhCCC-----------------
Confidence 999987766544 34444432 112222 22 3699999887666665542 33322
Q ss_pred CCCcccccCccEEEEEccccccceeeEEEe
Q 010896 465 VPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494 (498)
Q Consensus 465 v~~~~~~~~~~~alv~s~G~gG~n~~~vl~ 494 (498)
.+.+.++..+||.|-+...++++
T Consensus 315 -------~~Gd~vll~~~G~G~s~~~~~~~ 337 (338)
T PRK09258 315 -------KPGDRVALLGIGSGLNCSMLEVK 337 (338)
T ss_pred -------CCCCEEEEEEechhHhhHhHeee
Confidence 12356778899988776666654
|
|
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=99.69 E-value=5.8e-16 Score=155.68 Aligned_cols=286 Identities=21% Similarity=0.305 Sum_probs=179.7
Q ss_pred EEEEeeceecCCC-CCHHHHHHHHHcCCCCcccCCCC-CCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHHH
Q 010896 88 IVITGMGLVSVFG-SDIDKFYNKLLEGESGISPIDRF-DASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGR 165 (498)
Q Consensus 88 V~ItG~g~~~p~g-~~~~~~~~~L~~g~~~i~~~~~~-~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa~ 165 (498)
+.|+|+|...|.- .+.+++.+.+ +.. .+++ +..+ ++...+..+. .....|+.+|++
T Consensus 2 ~~I~~i~~~lP~~~~~~~~~~~~~--~~~----~~~~~~~~G-----------i~~r~~~~~~-----~~~~~la~~A~~ 59 (320)
T cd00830 2 ARILGIGSYLPERVVTNDELEKRL--DTS----DEWIRTRTG-----------IRERRIADPG-----ETTSDLAVEAAK 59 (320)
T ss_pred CEEEEEEEECCCcEEcHHHHHHHc--CCC----HHHhhhccC-----------ceEEeeCCCC-----CCHHHHHHHHHH
Confidence 6799999999986 5566666654 210 0000 0000 1101111111 234689999999
Q ss_pred HHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcC-CCCccc
Q 010896 166 RALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGL-MGPNYS 244 (498)
Q Consensus 166 ~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl-~Gp~~t 244 (498)
+||+++|++ ++++| .+++++.... ......+.+++..+|+ +.+.+.
T Consensus 60 ~al~~ag~~---~~~Id----~li~~~~~~~--------------------------~~~~~~~~~l~~~lg~~~~~~~~ 106 (320)
T cd00830 60 KALEDAGID---ADDID----LIIVATSTPD--------------------------YLFPATACLVQARLGAKNAAAFD 106 (320)
T ss_pred HHHHHcCCC---HHHCC----EEEEEcCCCC--------------------------CCCCcHHHHHHHHhCCCCCcEee
Confidence 999999994 44555 4666653211 1112356789999999 458889
Q ss_pred cccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeEEE
Q 010896 245 ISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324 (498)
Q Consensus 245 v~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaaav 324 (498)
++.+|+|++.||..|.++|++|.++.+||+++|.+. .. ..|+....++++||||+++
T Consensus 107 v~~~C~s~~~al~~A~~~i~~g~~~~vLvv~~e~~s-~~----------------------~~~~~~~~~~~~GDgAaA~ 163 (320)
T cd00830 107 INAACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLS-RI----------------------LDWTDRSTAVLFGDGAGAV 163 (320)
T ss_pred ccccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhc-cc----------------------cCcccCCceEEEeccceEE
Confidence 999999999999999999999999999999999621 10 0133345679999999999
Q ss_pred EEcchHHHHhcCCcEEEEEEeEEEecCCCC---CCCCC------------------CCh--------HHHHHHHHHHHHH
Q 010896 325 VMESLEHAMKRGANIIAEYLGGAVTCDAHH---MTDPR------------------SDG--------LGVSSCIAKSLED 375 (498)
Q Consensus 325 vLe~~~~A~~~g~~i~a~I~g~~~~~dg~~---~~~p~------------------~~~--------~~~~~~i~~Al~~ 375 (498)
||++.+. +.. |.++...+++.. ...+. ..+ ..+.++++++|++
T Consensus 164 ll~~~~~----~~~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 235 (320)
T cd00830 164 VLEATEE----DPG----ILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEK 235 (320)
T ss_pred EEEecCC----CCc----EEEEEEEEcCCCCCeEEeCCCCcCCccccccccCccEEEcChHHHHHHHHhhHHHHHHHHHH
Confidence 9997542 222 333333333221 00000 001 2345789999999
Q ss_pred cCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCC
Q 010896 376 AGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDN 455 (498)
Q Consensus 376 Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~ 455 (498)
+|++++|||++..|..+....+. +.+.++-. +-.+......+||+.+|+=.+.|..++ +.+.+.
T Consensus 236 ~g~~~~di~~~~~h~~~~~~~~~-----~~~~lgl~-~~~~~~~~~~~Gn~~sas~~~~L~~~~---~~~~~~------- 299 (320)
T cd00830 236 AGLTPDDIDWFVPHQANLRIIEA-----VAKRLGLP-EEKVVVNLDRYGNTSAASIPLALDEAI---EEGKLK------- 299 (320)
T ss_pred cCCCHHHCCEEEECCCCHHHHHH-----HHHHhCCC-HHHhhhhHHhhCcHHHHHHHHHHHHHH---HcCCCC-------
Confidence 99999999999999877655333 44444421 111223455799999998777776553 333321
Q ss_pred CCCCCCcCcCCCcccccCccEEEEEccccccceeeEE
Q 010896 456 LEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVV 492 (498)
Q Consensus 456 ~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~v 492 (498)
+.+.+++.+||.|-+..+++
T Consensus 300 -----------------~G~~vll~~~G~G~~~~~~l 319 (320)
T cd00830 300 -----------------KGDLVLLLGFGAGLTWGAAL 319 (320)
T ss_pred -----------------CCCEEEEEEEchHHhhHHhh
Confidence 22566777888876654443
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.9e-14 Score=145.44 Aligned_cols=241 Identities=19% Similarity=0.269 Sum_probs=155.0
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+.+|+++||+++|++ ++++| -+++++..+. . .. ..+..+...
T Consensus 96 ~~~La~~Aa~~aL~~agi~---~~dId----~li~~s~~~~----------------------~----~~-~~a~~v~~~ 141 (379)
T PLN02326 96 LTSLAVEAAKKALEMAGVD---PEDVD----LVLLCTSSPD----------------------D----LF-GSAPQVQAA 141 (379)
T ss_pred HHHHHHHHHHHHHHHcCCC---HHHCC----EEEEEeCCCC----------------------c----cC-cHHHHHHHH
Confidence 5689999999999999994 34444 3555543110 0 01 135578888
Q ss_pred hcCCC-CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCC
Q 010896 236 TGLMG-PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDG 314 (498)
Q Consensus 236 lgl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G 314 (498)
||+++ +++.|..+|++++.||..|.++|++|.++.+||+|.|.+. .. -.|+...+.
T Consensus 142 LG~~~~~~~dv~~~Ca~~~~aL~~A~~~l~~g~~~~vLVv~~e~~s-~~----------------------~~~~d~~~~ 198 (379)
T PLN02326 142 LGCTNALAFDLTAACSGFVLGLVTAARFIRGGGYKNVLVIGADALS-RY----------------------VDWTDRGTC 198 (379)
T ss_pred hCCCCCceeeccccchHHHHHHHHHHHHHHcCCCCEEEEEEechhc-CC----------------------CCccccCce
Confidence 99976 6788999999999999999999999999999999999621 10 011223455
Q ss_pred ccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCC-----------------------CCCC---------CCCh
Q 010896 315 FVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHH-----------------------MTDP---------RSDG 362 (498)
Q Consensus 315 ~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~-----------------------~~~p---------~~~~ 362 (498)
+++||||+|+||++.+... ..+ .++...+++.+ ...+ ..++
T Consensus 199 ~lfGDGAaAvlL~~~~~~~---~~i----~~~~~~t~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 271 (379)
T PLN02326 199 ILFGDGAGAVVLQACDDDE---DGL----LGFDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNG 271 (379)
T ss_pred EEEcceeEEEEEEEcCCCC---Cce----EEEEEEEcCCCCCeEEecCCCCcccccccccccccccccccccccceEecC
Confidence 7899999999999743211 112 11111111100 0000 0111
Q ss_pred H--------HHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHH
Q 010896 363 L--------GVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGL 433 (498)
Q Consensus 363 ~--------~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~ 433 (498)
. .+.++++++|+++|++++|||++..|-.+....| .+.+.++- ...+. .. -..+||+.+|+=.+
T Consensus 272 ~~v~~~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~~~~~-----~~~~~Lgl~~ek~~-~~-l~~~GNt~sAsi~~ 344 (379)
T PLN02326 272 KEVFKFAVRCVPQVIESALQKAGLTAESIDWLLLHQANQRIID-----AVAQRLGIPPEKVI-SN-LANYGNTSAASIPL 344 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHH-----HHHHHcCCCHHHee-ec-HhhcCcHHHHHHHH
Confidence 1 2345788999999999999999999976544422 34444542 11222 22 35899999888666
Q ss_pred HHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEe
Q 010896 434 EAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494 (498)
Q Consensus 434 ~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~ 494 (498)
.|... ++.+.+ .+.+.+++.+||.|-+-.+++++
T Consensus 345 ~L~~~---~~~g~~------------------------~~Gd~vll~~~G~G~t~~~~ll~ 378 (379)
T PLN02326 345 ALDEA---VRSGKV------------------------KKGDVIATAGFGAGLTWGSAIVR 378 (379)
T ss_pred HHHHH---HHcCCC------------------------CCCCEEEEEEEChhheeeEEEEE
Confidence 55544 233321 12367788899999888888875
|
|
| >KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.6e-15 Score=141.37 Aligned_cols=193 Identities=23% Similarity=0.363 Sum_probs=138.8
Q ss_pred CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchh--hHH--------HHh-------hccc----------
Q 010896 241 PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPT--GVG--------GFI-------ACRA---------- 293 (498)
Q Consensus 241 p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~--~~~--------~~~-------~~~~---------- 293 (498)
|..+|+.-|+|+|+|+..-...|+.|.+|+-|.+|+|++.+.. .+. .|. .|+.
T Consensus 115 pv~tvNRqCsSGLqaVadiA~~Ir~G~ydIGla~GvESMt~~~~~g~~g~~~~~~~~~~~A~dCllpmGitsEnva~rfg 194 (435)
T KOG1389|consen 115 PVRTVNRQCSSGLQAVADIAAKIRAGFYDIGLAAGVESMTTNYPRGWPGSINPRLQKFEKARDCLLPMGITSENVAERFG 194 (435)
T ss_pred chhhhhhhhhhHHHHHHHHHHHHhcCceeeecccchhhhcccCCCCCccccChhhhhhhHHhhcccccccchHHHHHHhC
Confidence 8889999999999999999999999999999999999853210 000 000 0000
Q ss_pred --------------------------------cccCCCCC-----------CCCCCcCCC-----------CCCCcc---
Q 010896 294 --------------------------------LSQRNEYP-----------KRASRPWDK-----------DRDGFV--- 316 (498)
Q Consensus 294 --------------------------------ls~~~~~p-----------~~~~rpfd~-----------~~~G~v--- 316 (498)
+.++-.+| ++..||-.. ..||..
T Consensus 195 vsR~eqD~~Av~S~kkAa~A~~~G~f~dEIiPv~tkv~D~~g~~k~i~v~~DeGiRp~ttl~~l~klkpvFkkdGttTag 274 (435)
T KOG1389|consen 195 VSREEQDEAAVDSHKKAAAATAKGKFKDEIIPVKTKVVDPKGDEKPITVSVDEGIRPNTTLESLAKLKPVFKKDGTTTAG 274 (435)
T ss_pred CChhhhhHHHHHHHHHHHHHhhcCcchhheeeeeeeccCCcCCccceeEecCCCCCCCcchhHHhhcchhhhcCCccccC
Confidence 00000011 122232110 113333
Q ss_pred ----ccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCC
Q 010896 317 ----MGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATS 392 (498)
Q Consensus 317 ----~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtg 392 (498)
.+||+++++|++...|.+.|.+++++.+.+.... ..|.-.|-+..-+|..+|+.+|+..+|||++|..
T Consensus 275 NsSQvSDGa~aVLLmkRs~A~qlgLPvlgvfr~f~~vG-----v~P~iMGiGPavAIp~alk~aGL~v~did~FEIN--- 346 (435)
T KOG1389|consen 275 NSSQVSDGAGAVLLMKRSVAMQLGLPVLGVFRDFAAVG-----VPPAIMGIGPAVAIPKALKAAGLEVDDIDLFEIN--- 346 (435)
T ss_pred chhhcccchhhhhhhhhhhHhhcCCceeEEeeeeeeec-----CCHHHcCCCchhhhHHHHHHcCCcccccceeehh---
Confidence 6899999999999999999999999999988764 3455566677889999999999999999999987
Q ss_pred CccCcHHHHHHH---HHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcC
Q 010896 393 TLAGDLAEVNAI---KKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTG 445 (498)
Q Consensus 393 t~~~D~~E~~al---~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g 445 (498)
+.+-.+++ +++--+...+++++..-.+||++||+|+..++..+.-|++.
T Consensus 347 ----EAFAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHPlGatGAR~VaTlL~emKrr 398 (435)
T KOG1389|consen 347 ----EAFASQALYCRNKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRR 398 (435)
T ss_pred ----HHHHHHHHHHHHHhCCCHHHcCCCCceeeccCCcCCccHhHHHHHHHHHHhh
Confidence 44433333 11111245688999999999999999999999998888763
|
|
| >KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.63 E-value=8.2e-15 Score=134.72 Aligned_cols=282 Identities=22% Similarity=0.373 Sum_probs=186.5
Q ss_pred ccccccCCCCCCCCCCccccccCCHHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHh
Q 010896 131 RFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQK 210 (498)
Q Consensus 131 ~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~ 210 (498)
.++|.+++|. ++.|...+++.||+.+++.+ +.+|.--+|.++.++..+..
T Consensus 18 tfGG~LKg~~---------------aTdL~~~AakAAL~aa~v~~---e~VD~VI~GNV~aSSsDgIY------------ 67 (396)
T KOG1391|consen 18 TFGGKLKGLS---------------ATDLGVVAAKAALKAANVGA---EAVDHVIMGNVLASSSDGIY------------ 67 (396)
T ss_pred cccccccCcc---------------hhhHHHHHHHHHHhhcCCCh---hhcceEEEeeeeeccCCceE------------
Confidence 5667776664 34788899999999999944 45665555666655432221
Q ss_pred cCCCcCCccccchhhhhhHHHHHHhhcC--CCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-------
Q 010896 211 GYKKITPFFIPYSITNMGSALLAIDTGL--MGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII------- 281 (498)
Q Consensus 211 ~~~~~~~~~~~~~~~n~~a~~ia~~lgl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~------- 281 (498)
++.++....|. .-|..+|+.-|-|+.++|-.+++.|.-|+++++|+||+|.+..
T Consensus 68 -----------------l~RHvGL~~GvP~e~pALtiNRLCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnMSq~Pf~vRn 130 (396)
T KOG1391|consen 68 -----------------LARHVGLRVGVPKETPALTINRLCGSGFQSIVNGAQEICVGEAEIVLCGGTENMSQAPFCVRN 130 (396)
T ss_pred -----------------eeeccccccCCcCccCceeehhhhcccHHHHHhhHHHhhcCcceEEEecCccccccCcceeee
Confidence 01112222222 1278899999999999999999999999999999999997410
Q ss_pred ----------------------------hhhHH----------------HHh-----------hccccccC---------
Q 010896 282 ----------------------------PTGVG----------------GFI-----------ACRALSQR--------- 297 (498)
Q Consensus 282 ----------------------------p~~~~----------------~~~-----------~~~~ls~~--------- 297 (498)
|+.+. .|. ..+.....
T Consensus 131 vRFGT~LG~~y~lED~LW~sLtD~y~kLpMa~TAEnL~~qyKisRee~DefaL~SQ~~Wkkaq~aG~fn~Ei~pI~~K~k 210 (396)
T KOG1391|consen 131 VRFGTKLGSDYKLEDSLWVSLTDQYVKLPMAMTAENLAVQYKISREECDEFALQSQQRWKKAQDAGYFNDEIAPIEVKTK 210 (396)
T ss_pred eeeccccccccchhhhHhhhccchhhhcchhhhHHHhhhhheecHHHhhHHHhhhHHHHHhhhhcCcccccccceEEeec
Confidence 00000 000 00000000
Q ss_pred -C---CCCCCCCCcC-----------CCCCCCcc-------ccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCC
Q 010896 298 -N---EYPKRASRPW-----------DKDRDGFV-------MGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHM 355 (498)
Q Consensus 298 -~---~~p~~~~rpf-----------d~~~~G~v-------~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~ 355 (498)
+ ..-++..||- --..||.+ ..||++++++.+++..++.+.+++++|.++....
T Consensus 211 kge~~f~vDEHpRp~TT~E~L~KLppvFkKdG~VtAGnASGi~DGA~AvivAsEdavK~~NlkPLARiVays~vG----- 285 (396)
T KOG1391|consen 211 KGEQTFQVDEHPRPQTTLEQLQKLPPVFKKDGTVTAGNASGIADGAGAVIVASEDAVKKHNLKPLARIVAYSVVG----- 285 (396)
T ss_pred cCceeeEecCCCCccchHHHHhhCCchhccCCeeeccccccccCCceeEEEechhHHhhcCCchhhhhheeeeec-----
Confidence 0 0001122221 01235655 5799999999999999999999999999998754
Q ss_pred CCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHH
Q 010896 356 TDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLE 434 (498)
Q Consensus 356 ~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~ 434 (498)
..|.-.|-+..-+|+.+|+.+|+...|||.+|..-... ..+.+..+.++- .+.++|++..-.+||++||||..-
T Consensus 286 cdP~IMGIGPvPAI~~vLKksGlkl~DiDl~EvNEAFA-----pQ~LAv~r~L~ld~sKlNVNGGAIALGHPLgaSGsRI 360 (396)
T KOG1391|consen 286 CDPSIMGIGPVPAISGVLKKSGLKLKDIDLVEVNEAFA-----PQYLAVERSLDLDISKLNVNGGAIALGHPLGASGSRI 360 (396)
T ss_pred cChhhccccCcHHHHHHHHHcCCcccccceEEechhhc-----hHHHHHHHhhCCChhhccccCceeeccCccccCcchh
Confidence 34445555667789999999999999999999873222 133445555542 467899999999999999999887
Q ss_pred HHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEeeC
Q 010896 435 AITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 435 li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
....+.-|+++ +.++.+=+++=-||+.-++++++.
T Consensus 361 t~HlVHEL~Rr---------------------------~~KYgiGSACIGGGQGIA~l~e~~ 395 (396)
T KOG1391|consen 361 TAHLVHELRRR---------------------------GGKYGIGSACIGGGQGIAVLIEST 395 (396)
T ss_pred hHHHHHHHHHc---------------------------CCccccccccccCCceEEEEEEec
Confidence 77777777653 234444344434667777777753
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.4e-14 Score=142.39 Aligned_cols=239 Identities=18% Similarity=0.282 Sum_probs=154.9
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+.+++++||+++|++ ++++| .|++|+.... .. . ..+.+++..
T Consensus 51 ~~~la~~A~~~aL~~ag~~---~~dId----~vi~~s~~~~----------------------~~---~--~~~~~v~~~ 96 (326)
T CHL00203 51 LTKLAAEAANKALDKAHMD---PLEID----LIILATSTPD----------------------DL---F--GSASQLQAE 96 (326)
T ss_pred HHHHHHHHHHHHHHHcCCC---HHHCC----EEEEEeCCCC----------------------CC---C--chHHHHHHH
Confidence 4689999999999999994 44555 4667653211 00 1 123467888
Q ss_pred hcCCC-CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCC
Q 010896 236 TGLMG-PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDG 314 (498)
Q Consensus 236 lgl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G 314 (498)
||+++ +++.|..+|+|++.||..|.++|++|.++.+||+|+|.+ +.. .+++.....
T Consensus 97 Lg~~~~~~~~v~~~Casg~~al~~A~~~i~sg~~~~~Lvv~~e~~-s~~----------------------~~~~~~~~~ 153 (326)
T CHL00203 97 IGATRAVAFDITAACSGFILALVTATQFIQNGSYKNILVVGADTL-SKW----------------------IDWSDRKTC 153 (326)
T ss_pred hCCCCCceeeecccchhHHHHHHHHHHHHHcCCCCEEEEEEehhh-hCc----------------------CCcccCCce
Confidence 89876 678999999999999999999999999999999999962 110 111222356
Q ss_pred ccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCC-----C-------------CCCC-------CCh-------
Q 010896 315 FVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHH-----M-------------TDPR-------SDG------- 362 (498)
Q Consensus 315 ~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~-----~-------------~~p~-------~~~------- 362 (498)
+++||||+|+||++.+. ..+ .++....|+.. . ..|. .++
T Consensus 154 ~~fgDga~A~ll~~~~~-----~~~----~~~~~~t~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 224 (326)
T CHL00203 154 ILFGDGAGAAIIGASYE-----NSI----LGFKLCTDGKLNSHLQLMNKPVNNQSFGTTKLPQGQYQSISMNGKEVYKFA 224 (326)
T ss_pred EEEcceeeEEEEEEcCC-----CCe----EEEEEEEcCCCcceEEecCCCCCcccccccccccCCcceEEECCHHHHHHH
Confidence 88999999999986432 112 22222222110 0 0010 011
Q ss_pred -HHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHH
Q 010896 363 -LGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIK 440 (498)
Q Consensus 363 -~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~ 440 (498)
..+.++++++|+++|++++|||++-.|-.+....+ ++.+.++- ...+. .+-..+||+.+|+=.+.|..+
T Consensus 225 ~~~~~~~i~~~L~~~g~~~~did~~~~hq~~~~~~~-----~~~~~lgl~~~k~~--~~l~~~Gn~~sasi~~~L~~~-- 295 (326)
T CHL00203 225 VFQVPAVIIKCLNALNISIDEVDWFILHQANKRILE-----AIANRLSVPNSKMI--TNLEKYGNTSAASIPLALDEA-- 295 (326)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHH-----HHHHHhCCCHHHhh--hHHHhhCcHHHHHHHHHHHHH--
Confidence 12445799999999999999999999976654433 34445542 12222 244688999887766555444
Q ss_pred HhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEe
Q 010896 441 AITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494 (498)
Q Consensus 441 ~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~ 494 (498)
++.|.+. +.+.+++-+||.|=+-.++|++
T Consensus 296 -~~~g~~~------------------------~Gd~vll~~~G~G~s~~~~v~~ 324 (326)
T CHL00203 296 -IQNNKIQ------------------------PGQIIVLSGFGAGLTWGAIVLK 324 (326)
T ss_pred -HHhCCCC------------------------CCCEEEEEEEchhhhheEEEEE
Confidence 3444331 2356777888988777777765
|
|
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.61 E-value=1e-13 Score=140.60 Aligned_cols=241 Identities=16% Similarity=0.156 Sum_probs=152.1
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+.+|+++||+++|++ ++++| .+++.++. .+.......+.+|+..
T Consensus 53 ~~~la~~Aa~~aL~~ag~~---~~dId----~li~~~~~-------------------------~~~~~~p~~a~~l~~~ 100 (339)
T PRK06840 53 TSDMAIAAAKPALKQAGVD---PAAID----VVIYIGSE-------------------------HKDYPVWSSAPKIQHE 100 (339)
T ss_pred HHHHHHHHHHHHHHHcCCC---HHHCC----EEEEeccC-------------------------CCCCCCCchHHHHHHH
Confidence 4689999999999999994 44454 34433221 1111122346788899
Q ss_pred hcCCC-CccccccccchHHHHHHHHHHHHHc-CCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCC
Q 010896 236 TGLMG-PNYSISTACATANYCFYAAANHIRR-GETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRD 313 (498)
Q Consensus 236 lgl~G-p~~tv~~acaS~l~Al~~A~~~I~~-G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~ 313 (498)
+|++. +.+.|..+|++++.||..|.++|++ |.++.+||.+.|... .. .. |+....
T Consensus 101 lGl~~~~~~~v~~~C~~~~~al~~A~~~l~~~g~~~~~Lvv~~~~~s-~~---------------------~~-~~~~~~ 157 (339)
T PRK06840 101 IGAKNAWAFDIMAVCASFPIALKVAKDLLYSDPSIENVLLVGGYRNS-DL---------------------VD-YDNPRT 157 (339)
T ss_pred hCCCCcccccccccchHHHHHHHHHHHHHhcCCCccEEEEEeecccc-cc---------------------cC-cCCCCe
Confidence 99976 7888999999999999999999999 999999998887511 10 01 111122
Q ss_pred Cc--cccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCC----------CCCC---C-------------CC----
Q 010896 314 GF--VMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHH----------MTDP---R-------------SD---- 361 (498)
Q Consensus 314 G~--v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~----------~~~p---~-------------~~---- 361 (498)
.+ .+||||+|+||++.+. +.. |.+....+|+.. ...| . +.
T Consensus 158 ~~~~~~GDgAaA~ll~~~~~----~~~----il~~~~~t~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (339)
T PRK06840 158 RFMFNFAAGGSAALLKKDAG----KNR----ILGSAIITDGSFSEDVRVPAGGTKQPASPETVENRQHYLDVIDPESMKE 229 (339)
T ss_pred eeeccCCCceeEEEEEecCC----CCc----eEEEEEEEcCCccceEEecCCCcCCCCcccccccccceEEEcCcHHHHH
Confidence 32 3699999999986431 222 223222222210 0000 0 00
Q ss_pred ------hHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcCC-CcccccccccccCCcchhhhHHH
Q 010896 362 ------GLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDT-SEMKMNGTKSMIGHGLGAAGGLE 434 (498)
Q Consensus 362 ------~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~~-~~~~v~s~K~~~Gh~~~AaG~~~ 434 (498)
.....++++++|+++|++++|||++-.|-.+... .+.+.+.++-. .+.. ....+||+.+|+=.+.
T Consensus 230 ~~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~h~~~~~~-----~~~~~~~Lgl~~~~~~---~~~~~Gn~~sas~~~~ 301 (339)
T PRK06840 230 RLDEVSIPNFLKVIREALRKSGYTPKDIDYLAILHMKRSA-----HIALLEGLGLTEEQAI---YLDEYGHLGQLDQILS 301 (339)
T ss_pred HhHhhHHHHHHHHHHHHHHHcCCCHHHCCEEEECCcCHHH-----HHHHHHHcCCCHHHeE---eHHhccchhhhhHHHH
Confidence 0124578999999999999999999887544333 22344444431 1222 2457899988876666
Q ss_pred HHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEe
Q 010896 435 AITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494 (498)
Q Consensus 435 li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~ 494 (498)
|...+ +.+.+ .+..++++.+||.|.+..+++++
T Consensus 302 L~~~~---~~~~~------------------------~~Gd~ill~~~G~G~s~~~~~l~ 334 (339)
T PRK06840 302 LHLAL---EQGKL------------------------KDGDLVVLVSAGTGYTWAATVIR 334 (339)
T ss_pred HHHHH---HcCCC------------------------CCCCEEEEEEEehhhheeEEEEE
Confidence 65432 33221 12356778899999998888886
|
|
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.6e-13 Score=133.89 Aligned_cols=242 Identities=18% Similarity=0.234 Sum_probs=151.5
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+..|+++||+++|+ +++++| -+++++.. +....+..+.+|+..
T Consensus 52 ~~~la~~Aa~~aL~~ag~---~~~~Id----~li~~t~~--------------------------~d~~~p~~a~~v~~~ 98 (326)
T PRK05963 52 LSDLAASAGDMALSDAGI---ERSDIA----LTLLATST--------------------------PDHLLPPSAPLLAHR 98 (326)
T ss_pred HHHHHHHHHHHHHHHcCC---CHHHCC----EEEEECCC--------------------------CCCCCCcHHHHHHHH
Confidence 458999999999999999 444554 46666532 122234456789999
Q ss_pred hcCCC-CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCC
Q 010896 236 TGLMG-PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDG 314 (498)
Q Consensus 236 lgl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G 314 (498)
||++. +++.+..+|++++.||..|..+|+++. +.+||.+.|.. +. .+ .| +....+
T Consensus 99 Lg~~~~~~~di~~~C~g~~~aL~~A~~~l~~~~-~~aLVv~~d~~-s~----------~~-----------~~-~~~~~~ 154 (326)
T PRK05963 99 LGLQNSGAIDLAGACAGFLYALVLADGFVRAQG-KPVLVVAANIL-SR----------RI-----------NM-AERASA 154 (326)
T ss_pred hCCCCCceeeccchhhHHHHHHHHHHHHHHcCC-CeEEEEEechh-hc----------cC-----------Cc-cccCce
Confidence 99965 788899999999999999999999985 88998888852 10 01 11 112356
Q ss_pred ccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCC----------CCCC--------C-----CCh--------H
Q 010896 315 FVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHH----------MTDP--------R-----SDG--------L 363 (498)
Q Consensus 315 ~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~----------~~~p--------~-----~~~--------~ 363 (498)
+++||||+|+||++.+.. ...+ .+....+++.. ...| . .++ .
T Consensus 155 ~lfGDgA~A~ll~~~~~~---~~~~----l~~~~~t~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (326)
T PRK05963 155 VLFADAAGAVVLAPSAKA---NSGV----LGSQLISDGSHYDLIKIPAGGSARPFAPERDASEFLMTMQDGRAVFTEAVR 227 (326)
T ss_pred EEEeecceEEEEEecCCC---CCce----EEEEEEEcCCCCCeEEeCCCCcCCCCcccccccccceEecCCHHHHHHHHH
Confidence 889999999999863321 1112 11212211110 0000 0 011 2
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhh
Q 010896 364 GVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAIT 443 (498)
Q Consensus 364 ~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~ 443 (498)
.+.++++++|+++|++++|||++..|-.+... .+.+.+.++-. +-.+...-..+||+.+|+=.+.|-. .++
T Consensus 228 ~~~~~~~~~L~~~gl~~~did~~~~h~~~~~~-----~~~~~~~l~l~-~~k~~~~l~~~Gn~~sas~~~~L~~---~~~ 298 (326)
T PRK05963 228 MMSGASQNVLASAAMTPQDIDRFFPHQANARI-----VDKVCETIGIP-RAKAASTLETYGNSSAATIPLSLSL---ANL 298 (326)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEeCCCCHHH-----HHHHHHHcCCC-HHHhhhhHHhhCcHHHHHHHHHHHH---HHH
Confidence 34568889999999999999999999655433 22334444321 1111123367899876664444422 223
Q ss_pred cCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEe
Q 010896 444 TGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494 (498)
Q Consensus 444 ~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~ 494 (498)
.+.+ .+.+.+++.+||.|-+-.++|++
T Consensus 299 ~~~~------------------------~~Gd~vll~~~G~G~~~~~~ll~ 325 (326)
T PRK05963 299 EQPL------------------------REGERLLFAAAGAGMTGGAVVMR 325 (326)
T ss_pred hCCC------------------------CCCCEEEEEEEehhhhheeeEEe
Confidence 3221 12357788899999888888875
|
|
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.2e-12 Score=132.77 Aligned_cols=238 Identities=18% Similarity=0.203 Sum_probs=151.4
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+++|+++||+++|+ +++++| .+++++..+. ...+..+..+...
T Consensus 50 ~~~la~~Aa~~aL~~agl---~~~dID----~li~~s~~~~--------------------------~~~p~~a~~v~~~ 96 (345)
T TIGR00748 50 TATIGVEAARNALKRAKI---DPKDIG----AVYVGSESHP--------------------------YAVKPTATIVAEA 96 (345)
T ss_pred HHHHHHHHHHHHHHHcCC---CHHHCC----EEEEEecCCC--------------------------ccccchHHHHHHH
Confidence 468999999999999999 445565 5666653211 1112235678888
Q ss_pred hcCCC--CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCC
Q 010896 236 TGLMG--PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRD 313 (498)
Q Consensus 236 lgl~G--p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~ 313 (498)
+|++. +.+.+..+|+++..||..|..+|++|.++.+||.+.|... . .|. | ..
T Consensus 97 LGl~~~~~~~dv~~aC~g~~~al~~A~~~i~sg~~~~vLVv~~d~~~---------------~---~~~------~--~~ 150 (345)
T TIGR00748 97 IGATPDLTAADLEFACKAGTAGIQACMGLVASGMIKYGLAIGADTAQ---------------G---APG------D--AL 150 (345)
T ss_pred cCCCCCceEEEHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeecc---------------c---CCC------c--cC
Confidence 99863 6888999999999999999999999999999999999621 0 011 1 11
Q ss_pred CccccceeEEEEEcchHHHHhcCCcEEEEEEeEE-EecCCCC---C-CC--CC----CC-----hHHHHHHHHHHHHHcC
Q 010896 314 GFVMGEGCGILVMESLEHAMKRGANIIAEYLGGA-VTCDAHH---M-TD--PR----SD-----GLGVSSCIAKSLEDAG 377 (498)
Q Consensus 314 G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~-~~~dg~~---~-~~--p~----~~-----~~~~~~~i~~Al~~Ag 377 (498)
-+..||||+|+||++.+. ...+.+.. ...|+.. . .. +. .. ......+++++|+++|
T Consensus 151 ~~~~GDGAaA~vl~~~~~--------~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g 222 (345)
T TIGR00748 151 EYTAGAGGAAYIIGEKNT--------VAYFEGTYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFHHVVTAAKGLMEKLG 222 (345)
T ss_pred cccCCCceEEEEEccCCc--------ceEeecccceecccccccccCCCcCCCcCCeecChHHHHHHHHHHHHHHHHHcC
Confidence 255799999999985331 11222221 1111110 0 00 10 00 1123368889999999
Q ss_pred CCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCC
Q 010896 378 VSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNL 456 (498)
Q Consensus 378 l~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~ 456 (498)
++++|||++-.|-.+... .+.+.+.++- ...+..+-.-..+||+.+|+=.+.|...+.. +
T Consensus 223 l~~~did~~i~Hq~~~~~-----~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~~-----~--------- 283 (345)
T TIGR00748 223 LTPEDFDYAVFHQPNGKF-----YLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLDI-----A--------- 283 (345)
T ss_pred CCHHHcCEEEeCCCChHH-----HHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHHh-----c---------
Confidence 999999999999654433 2224444442 1122221112569999988877666554321 1
Q ss_pred CCCCCcCcCCCcccccCccEEEEEccccccceeeEEEe
Q 010896 457 EPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494 (498)
Q Consensus 457 ~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~ 494 (498)
.+.+.++..+||.|-+...++++
T Consensus 284 ---------------~~Gd~vll~~~G~G~s~~~~~~~ 306 (345)
T TIGR00748 284 ---------------EPGDRILAVSYGSGAGSDAFSIV 306 (345)
T ss_pred ---------------CCCCEEEEEEecCCcceeEEEEE
Confidence 01246788899998888888874
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.7e-12 Score=131.84 Aligned_cols=238 Identities=18% Similarity=0.197 Sum_probs=151.8
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+.+|+++||+++|+ +++++| .+++++..+. ......+.++...
T Consensus 51 ~~~la~~Aa~~aL~~ag~---~~~dId----~li~~s~~~~--------------------------~~~p~~a~~v~~~ 97 (347)
T PRK04262 51 TATIAVEAARNALKRAGI---DPKEIG----AVYVGSESHP--------------------------YAVKPTATIVAEA 97 (347)
T ss_pred HHHHHHHHHHHHHHHcCC---CHHHCC----EEEEEecCCC--------------------------cccccHHHHHHHH
Confidence 468999999999999999 445555 4666653211 1112235578888
Q ss_pred hcCCC--CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCC
Q 010896 236 TGLMG--PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRD 313 (498)
Q Consensus 236 lgl~G--p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~ 313 (498)
+|++. +.+.+..+|++++.+|+.|..+|++|.++.+||.+.|.... . |.. .+
T Consensus 98 Lgl~~~~~~~dv~~~C~~~~~aL~~A~~~i~sg~~~~aLVv~~e~~~~-------------~-----~~~---~~----- 151 (347)
T PRK04262 98 LGATPDLTAADLEFACKAGTAALQAAMGLVKSGMIKYALAIGADTAQG-------------A-----PGD---AL----- 151 (347)
T ss_pred cCCCCCceEEEHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeecc-------------C-----CCC---CC-----
Confidence 99974 56789999999999999999999999999999999995100 0 111 01
Q ss_pred CccccceeEEEEEcchHHHHhcCCcEEEEEEeEE-EecCCCCC------CCCC----CC-----hHHHHHHHHHHHHHcC
Q 010896 314 GFVMGEGCGILVMESLEHAMKRGANIIAEYLGGA-VTCDAHHM------TDPR----SD-----GLGVSSCIAKSLEDAG 377 (498)
Q Consensus 314 G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~-~~~dg~~~------~~p~----~~-----~~~~~~~i~~Al~~Ag 377 (498)
-+..||||+++||++.+. ..+|.+.. ...|.... ..|. .. ......+++++|+++|
T Consensus 152 ~~~~GDGA~A~ll~~~~~--------~~~i~~~~~~~~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g 223 (347)
T PRK04262 152 EYTAAAGGAAFIIGKEEV--------IAEIEATYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFKHIISAAKGLMEKLG 223 (347)
T ss_pred CCcCCCCcEEEEEecCcc--------cceeeccccccccchhhcCCCCCcCCCcCceecchHHHHHHHHHHHHHHHHHhC
Confidence 134599999999986321 12333321 11122110 0010 01 1345678999999999
Q ss_pred CCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCC
Q 010896 378 VSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNL 456 (498)
Q Consensus 378 l~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~ 456 (498)
++++|||++-.|-.+....+. +.+.++- ...+..+-+-..+||+.+|+=.+.|..++. . +
T Consensus 224 l~~~dId~~v~Hq~n~~~~~~-----~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~----~-~--------- 284 (347)
T PRK04262 224 LKPSDYDYAVFHQPNGKFPLR-----VAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVLD----V-A--------- 284 (347)
T ss_pred cCHHHhceeecCCCchHHHHH-----HHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHHH----h-C---------
Confidence 999999999999655554333 3333332 122222112467999999886666655432 1 1
Q ss_pred CCCCCcCcCCCcccccCccEEEEEccccccceeeEEEe
Q 010896 457 EPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494 (498)
Q Consensus 457 ~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~ 494 (498)
.+...++..+||.|-+...++++
T Consensus 285 ---------------~~Gd~vll~~~G~G~~~~~~~~~ 307 (347)
T PRK04262 285 ---------------KPGDRILVVSFGSGAGSDAFSIT 307 (347)
T ss_pred ---------------CCCCEEEEEecCCCcceeeEEEE
Confidence 01246778899988877676664
|
|
| >cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.1e-13 Score=136.09 Aligned_cols=241 Identities=18% Similarity=0.172 Sum_probs=155.4
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+.+++++||+++|+ +++++| .+++++..... .....+.+++..
T Consensus 48 ~~~l~~~a~~~aL~~ag~---~~~~Id----~li~~~~~~~~--------------------------~~~~~~~~i~~~ 94 (324)
T cd00827 48 VPTMAVEAARRALERAGI---DPDDIG----LLIVATESPID--------------------------KGKSAATYLAEL 94 (324)
T ss_pred HHHHHHHHHHHHHHHcCC---CHHHCC----EEEEEcCCCCC--------------------------CCccHHHHHHHH
Confidence 468999999999999999 445555 57777532110 122346778889
Q ss_pred hcCC-CCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCC
Q 010896 236 TGLM-GPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDG 314 (498)
Q Consensus 236 lgl~-Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G 314 (498)
+|++ .|.++++.+|+|++.||..|+++|++|.++.+||+++|.+... +.+...++
T Consensus 95 lg~~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~~------------------------~~~~~~~~ 150 (324)
T cd00827 95 LGLTNAEAFDLKQACYGGTAALQLAANLVESGPWRYALVVASDIASYL------------------------LDEGSALE 150 (324)
T ss_pred cCCCCCceeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEEHHhhhc------------------------ccCCCCcc
Confidence 9984 5889999999999999999999999999999999999963211 11234678
Q ss_pred ccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCC---------CCC-------------CC--------CChHH
Q 010896 315 FVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHH---------MTD-------------PR--------SDGLG 364 (498)
Q Consensus 315 ~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~---------~~~-------------p~--------~~~~~ 364 (498)
+++||||+++||++.+.. .+..+ ......+++.. ... .+ .....
T Consensus 151 ~~~gdgaaA~ll~~~~~~--~~~~i----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (324)
T cd00827 151 PTLGDGAAAMLVSRNPGI--LAAGI----VSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKL 224 (324)
T ss_pred ccccCceEEEEEecCccc--ccCCc----eeeeeecccccccCccceeccCCCcchhhhhhcceeecCCccchHHHHhHH
Confidence 999999999999976532 01122 22222222110 000 00 01234
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEccCCCC-ccCcHHHHHHHHHHhcC-CCccccc--ccccccCCcchhhhHHHHHHHHH
Q 010896 365 VSSCIAKSLEDAGVSPEEVNYVNAHATST-LAGDLAEVNAIKKVFKD-TSEMKMN--GTKSMIGHGLGAAGGLEAITTIK 440 (498)
Q Consensus 365 ~~~~i~~Al~~Agl~~~dId~i~~hgtgt-~~~D~~E~~al~~~f~~-~~~~~v~--s~K~~~Gh~~~AaG~~~li~a~~ 440 (498)
+..+++++|+++|++ +||+++..|..+- ...+. +.+.++- ...+... ..-..+||+.+|+-.+.|-.+
T Consensus 225 ~~~~~~~~l~~~~~~-~~i~~~~~h~~~~~~~~~~-----~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~-- 296 (324)
T cd00827 225 IAKVVRKALDRAGLS-EDIDYFVPHQPNGKKILEA-----VAKKLGGPPEKASQTRWILLRRVGNMYAASILLGLASL-- 296 (324)
T ss_pred HHHHHHHHHHHcccc-cccceeeccCchHHHHHHH-----HHHHccchHhhhccchhhHHHHhCchHHHHHHHHHHHH--
Confidence 567899999999999 9999999996654 33222 2222221 1112221 245778999888766655544
Q ss_pred HhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEE
Q 010896 441 AITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVV 492 (498)
Q Consensus 441 ~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~v 492 (498)
++.+.+ .+.+.+++-+||.|-+-.+++
T Consensus 297 -~~~~~~------------------------~~Gd~vl~~~~G~G~~~~~~~ 323 (324)
T cd00827 297 -LESGKL------------------------KAGDRVLLFSYGSGFTAEAFV 323 (324)
T ss_pred -HhcCCC------------------------CCCCEEEEEEeccchhheecc
Confidence 333221 123567778889887765554
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. |
| >PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.46 E-value=7.5e-12 Score=127.12 Aligned_cols=241 Identities=15% Similarity=0.126 Sum_probs=150.3
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+.+|+++||+++|++ ++++| -+++++. .+....+..+.+|...
T Consensus 60 ~~~la~~Aa~~aL~~a~~~---~~dId----~lI~~t~--------------------------t~d~~~P~~a~~v~~~ 106 (353)
T PRK12880 60 VSDLGKHAANTLLQGLNID---KNSLD----ALIVVTQ--------------------------SPDFFMPSTACYLHQL 106 (353)
T ss_pred HHHHHHHHHHHHHHHcCCC---HHHCC----EEEEEcC--------------------------CCCCCCCcHHHHHHHH
Confidence 5689999999999999994 44554 4566653 2334556788899999
Q ss_pred hcCCC--CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCC
Q 010896 236 TGLMG--PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRD 313 (498)
Q Consensus 236 lgl~G--p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~ 313 (498)
||++. +++.|..+|++++.+|..|..+|++|..+ +|+.+.|.. +. .+ .| +....
T Consensus 107 Lg~~~~~~~~di~~~C~g~~~aL~~A~~~i~~~~~~-~LVv~~e~~-S~----------~~-----------~~-~d~~~ 162 (353)
T PRK12880 107 LNLSSKTIAFDLGQACAGYLYGLFVAHSLIQSGLGK-ILLICGDTL-SK----------FI-----------HP-KNMNL 162 (353)
T ss_pred hCCCCCceEEehhhhhHHHHHHHHHHHHHHHcCCCC-EEEEEehhh-hc----------cC-----------Cc-ccCCc
Confidence 99973 57889999999999999999999999999 888888851 10 01 11 11123
Q ss_pred CccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEec------CCCC--CCC----------C---------CCChH---
Q 010896 314 GFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTC------DAHH--MTD----------P---------RSDGL--- 363 (498)
Q Consensus 314 G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~------dg~~--~~~----------p---------~~~~~--- 363 (498)
..++||||+|+||++.+.. .+ + ..+...+... .+.+ ... + ..++.
T Consensus 163 ~~lFGDGAaA~vl~~~~~~--~~--~-~~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ 237 (353)
T PRK12880 163 APIFGDGVSATLIEKTDFN--EA--F-FELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGANIF 237 (353)
T ss_pred eeeecccceEEEEEecCCC--Cc--e-EEEEecCCCCCeEEecCCCcCCCccccccccccccccccccCceEEEcCHHHH
Confidence 4689999999999853321 11 1 1111111100 0000 000 0 01122
Q ss_pred -----HHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHH
Q 010896 364 -----GVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAIT 437 (498)
Q Consensus 364 -----~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~ 437 (498)
.+..+++++|+++|++++|||++-.|-.+-. -.+.+.+.++- ...++ ..+-..+|++.+|+=.+.|-.
T Consensus 238 ~~~~~~~~~~i~~~L~~~gl~~~did~~v~HQ~~~~-----i~~~i~~~Lgl~~ek~~-~~~l~~~GNtssasip~~L~~ 311 (353)
T PRK12880 238 NMALECEPKSFKEILEFSKVDEKDIAFHLFHQSNAY-----LVDCIKEELKLNDDKVP-NFIMEKYANLSACSLPALLCE 311 (353)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHH-----HHHHHHHHhCCCHHHhh-hhhHHhhCCHHHHHHHHHHHH
Confidence 2246899999999999999999999955433 33455555542 11221 122345788776664433332
Q ss_pred HHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 438 TIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 438 a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
. ++.+ +.+ ++..+||.|=+-.+++++-
T Consensus 312 ~---~~~~---------------------------~~~-~ll~~~G~G~s~g~~ll~~ 338 (353)
T PRK12880 312 L---DTPK---------------------------EFK-ASLSAFGAGLSWGSAVLNF 338 (353)
T ss_pred H---HHcC---------------------------CcE-EEEEEEchhhhheEeEEEE
Confidence 2 1111 112 5777889888888887763
|
|
| >KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.9e-13 Score=126.38 Aligned_cols=148 Identities=18% Similarity=0.280 Sum_probs=106.7
Q ss_pred cccceeEEEEEcchHHHHhcCCcEEEEEEeEE-EecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCC--
Q 010896 316 VMGEGCGILVMESLEHAMKRGANIIAEYLGGA-VTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATS-- 392 (498)
Q Consensus 316 v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~-~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtg-- 392 (498)
.+.||+.+.+++.+|.|++.|.++-+.++.+- +.+|......- +....+.+.|++||++..|||.+|.|-..
T Consensus 301 fltdgasa~limteekala~gykpkaylrdflyvsqdpkdqlll-----gpay~ipkll~kagltlkdid~feiheafag 375 (465)
T KOG1392|consen 301 FLTDGASAALIMTEEKALANGYKPKAYLRDFLYVSQDPKDQLLL-----GPAYVIPKLLDKAGLTLKDIDVFEIHEAFAG 375 (465)
T ss_pred hhcCcchhhhhhhHHHHHHcCCCchHHhhhheeeccCchhheec-----ccccccHHHHHHcCCcccccchhhhHHHHhH
Confidence 36799999999999999999999999999875 34444322111 12456889999999999999999999421
Q ss_pred CccCcHHHHHHHH-----HHh-cC--------CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCC
Q 010896 393 TLAGDLAEVNAIK-----KVF-KD--------TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEP 458 (498)
Q Consensus 393 t~~~D~~E~~al~-----~~f-~~--------~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~ 458 (498)
..+ ....++. +.+ +. ...++..+....+||+.||.|+.-...+..-|+.
T Consensus 376 qil---anlkamdsdwfck~ymgr~~kvg~ppl~k~nnwggslsighpfgatgvrl~mh~anrl~~-------------- 438 (465)
T KOG1392|consen 376 QIL---ANLKAMDSDWFCKEYMGRSGKVGRPPLDKLNNWGGSLSIGHPFGATGVRLAMHSANRLKE-------------- 438 (465)
T ss_pred HHH---hhhhhhcchHHHHHHhcccCccCCCChHHhcccCcceecCCcccccchhhHHHHHhHHHh--------------
Confidence 111 0111221 111 11 2335566778889999999999877776655533
Q ss_pred CCCcCcCCCcccccCccEEEEEccccccceeeEEEeeCCC
Q 010896 459 EVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPFSP 498 (498)
Q Consensus 459 ~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~~~ 498 (498)
.+.++++|-++..||+...++++.|+.
T Consensus 439 -------------e~gqygvvaacaaggqgvamlieaypk 465 (465)
T KOG1392|consen 439 -------------EKGQYGVVAACAAGGQGVAMLIEAYPK 465 (465)
T ss_pred -------------hcCceeEeehhhcCCcceEEEeeccCC
Confidence 345789999999999999999999973
|
|
| >PLN03172 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.6e-11 Score=123.44 Aligned_cols=331 Identities=13% Similarity=0.120 Sum_probs=185.8
Q ss_pred CcEEEEeeceecCCC-CCHHHHHHHHH---cC--CCCccc-CCC-CCCCCCCcccccc----cCCCCCCC--CCCccccc
Q 010896 86 KRIVITGMGLVSVFG-SDIDKFYNKLL---EG--ESGISP-IDR-FDASSFSVRFGGQ----IRDFSSKG--YIDGKNDR 151 (498)
Q Consensus 86 ~~V~ItG~g~~~p~g-~~~~~~~~~L~---~g--~~~i~~-~~~-~~~~~~~~~~~g~----i~~~d~~~--~i~~~~~~ 151 (498)
-+..|.|+|...|.- ...+++++.+. +. ...+.. +.+ |+..+...|+... ++.+ +.+ +..|....
T Consensus 15 ~~~~I~~igta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~-~~~~~~~~p~~~~ 93 (393)
T PLN03172 15 GPATILAIGKATPANCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKEN-PNMCAYMAPSLDA 93 (393)
T ss_pred CCeEEEEEEecCCCccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhC-ccccccCCCCHHH
Confidence 347899999999976 44555555444 21 111111 111 2333333333222 1111 111 12223233
Q ss_pred c----CCHHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhh
Q 010896 152 R----LDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNM 227 (498)
Q Consensus 152 ~----~d~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 227 (498)
+ ..-...|+.+|+++||+++|+ ++++++ -++++++.+ . . .+.
T Consensus 94 r~~~~~~~a~~La~~Aa~~aL~~ag~---~~~dId----~ii~~t~t~-~-------------------------~-~P~ 139 (393)
T PLN03172 94 RQDMVVVEVPKLGKEAAAKAIKEWGQ---PKSKIT----HLVFCTTSG-V-------------------------D-MPG 139 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCC---CHHHCC----EEEEEccCC-C-------------------------c-Cch
Confidence 3 334558999999999999999 444454 355565321 0 1 234
Q ss_pred hHHHHHHhhcCCCCc---cccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCC
Q 010896 228 GSALLAIDTGLMGPN---YSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRA 304 (498)
Q Consensus 228 ~a~~ia~~lgl~Gp~---~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~ 304 (498)
.+.+|...||++.-. +.+..+|++++.+|..|.++++++....+||.++|.+... | .. +++
T Consensus 140 ~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~-----~-----~~-----~~d- 203 (393)
T PLN03172 140 ADYQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAENNAGSRVLVVCSEITAVT-----F-----RG-----PSD- 203 (393)
T ss_pred HHHHHHHHhCCCCCceEEeeeCCchHHHHHHHHHHHHHHHcCCCCeEEEEEEehhhhh-----h-----cc-----ccc-
Confidence 678899999998632 4568999999999999999999999999999999962100 0 00 000
Q ss_pred CCcCCCCCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEE----ecCCC----------C----CCCCCCChHHHH
Q 010896 305 SRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAV----TCDAH----------H----MTDPRSDGLGVS 366 (498)
Q Consensus 305 ~rpfd~~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~----~~dg~----------~----~~~p~~~~~~~~ 366 (498)
+..+.--...++||||+|+||+..+... . .++.-+|.++.. .+++. + ...|..-...+.
T Consensus 204 -~~~~~~v~~~LFGDGAaAvVl~~~~~~~-~-~~~~~~i~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~ 280 (393)
T PLN03172 204 -THLDSLVGQALFGDGAAAVIIGADPDTK-I-ERPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIE 280 (393)
T ss_pred -ccHHhhhccchhcCceEEEEEecCCCCc-c-cCceeEEeeeccEEecCCcccccceEEcCCcEEEEechHHHHHHHHHH
Confidence 0000002357799999999998643211 0 111123443321 11111 1 011111223556
Q ss_pred HHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccc-cccccccCCcchhhhHHHHHHHHHH-hh
Q 010896 367 SCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKM-NGTKSMIGHGLGAAGGLEAITTIKA-IT 443 (498)
Q Consensus 367 ~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v-~s~K~~~Gh~~~AaG~~~li~a~~~-L~ 443 (498)
..+++.|++.|++..||+++-.|--|-...| ++.+.++- ...+.. ..+-..+|++-+|+=..-|-..... ++
T Consensus 281 ~~~~~~L~~~gl~~~di~~~~~Hqgg~~Il~-----~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~ 355 (393)
T PLN03172 281 KSLVEAFAPIGINDWNSIFWIAHPGGPAILD-----QVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIE 355 (393)
T ss_pred HHHHHHhhhcCCCccccceEEecCCcHHHHH-----HHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhh
Confidence 7888999999999999999999966655433 45555542 111211 1244567888776633333322110 11
Q ss_pred cCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEeeC
Q 010896 444 TGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 444 ~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
.|.+. ...+...++..+||.|=+-..++|+..
T Consensus 356 ~g~~~---------------------~G~~~~~~ll~afGpG~t~~~~ll~~~ 387 (393)
T PLN03172 356 EGKGS---------------------TGEGLEWGVLFGFGPGLTVETVVLHSV 387 (393)
T ss_pred cCCCC---------------------CCCCcceEEEEEeCCcceeeeeeeEec
Confidence 11110 001225678889999888888888863
|
|
| >COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.40 E-value=4e-13 Score=137.92 Aligned_cols=52 Identities=35% Similarity=0.537 Sum_probs=47.2
Q ss_pred hHHHHHHhhcCCC--CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccc
Q 010896 228 GSALLAIDTGLMG--PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAA 279 (498)
Q Consensus 228 ~a~~ia~~lgl~G--p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~ 279 (498)
.+..++...|+.. |.++|+.+|+|++.|+..|++.|++|++|++|+||+|.+
T Consensus 69 ~ar~~a~~aGl~~~~p~~~V~~~c~SG~~Av~~A~~~I~sG~~dvvlagG~E~m 122 (392)
T COG0183 69 IARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKM 122 (392)
T ss_pred HHHHHHHHcCCCCCCCceEEeccchhHHHHHHHHHHHHHCCCCCEEEEEeeeec
Confidence 4556777888876 999999999999999999999999999999999999875
|
|
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.8e-11 Score=125.15 Aligned_cols=251 Identities=18% Similarity=0.188 Sum_probs=157.5
Q ss_pred CHHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHH
Q 010896 154 DDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLA 233 (498)
Q Consensus 154 d~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia 233 (498)
.....|+.+|+++||+++|++ +++++ .++++++.+ ...+..+.+|.
T Consensus 83 ~~~~~la~~Aa~~aL~~a~~~---~~~Id----~li~~s~~~---------------------------~~~P~~a~~i~ 128 (361)
T cd00831 83 EEARELAEEAARGALDEAGLR---PSDID----HLVVNTSTG---------------------------NPTPSLDAMLI 128 (361)
T ss_pred HHHHHHHHHHHHHHHHHhCCC---HHHCC----EEEEECCCC---------------------------CCCCCHHHHHH
Confidence 346689999999999999994 44454 455655321 12345677899
Q ss_pred HhhcCCC--Cccccc-cccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCC-
Q 010896 234 IDTGLMG--PNYSIS-TACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWD- 309 (498)
Q Consensus 234 ~~lgl~G--p~~tv~-~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd- 309 (498)
..+|++. +++.|. .+|++++.||..|..+|++|..+.+||.++|... .. + ++-|
T Consensus 129 ~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~~~~~~~~~~aLvv~~e~~s-~~----------~-----------~~~d~ 186 (361)
T cd00831 129 NRLGLRPDVKRYNLGGMGCSAGAIALDLAKDLLEANPGARVLVVSTELCS-LW----------Y-----------RGPDH 186 (361)
T ss_pred HHhCCCcccchhccccccchhHHHHHHHHHHHHHHCCCCEEEEEEeeccc-ce----------e-----------CCCCc
Confidence 9999974 567888 8999999999999999999999999999999621 10 0 1111
Q ss_pred CC--CCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEe--------------cCCCCCC----CCCCChHHHHHHH
Q 010896 310 KD--RDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVT--------------CDAHHMT----DPRSDGLGVSSCI 369 (498)
Q Consensus 310 ~~--~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~--------------~dg~~~~----~p~~~~~~~~~~i 369 (498)
.+ -..+++||||+|+||++.+..... ......+.+.... ..+.+.. .+......+.+++
T Consensus 187 ~~~~~~~~lfGDgaaA~ll~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i 265 (361)
T cd00831 187 RSMLVGNALFGDGAAAVLLSNDPRDRRR-ERPLFELVRAASTLLPDSEDAMGWHLGEEGLTFVLSRDVPRLVEKNLERVL 265 (361)
T ss_pred HHHhhhhhhccCCceEEEEEcCCCcccc-cccceeeecccceeeecCCCceEEEEEcceEEEEeChhHHHHHHHHHHHHH
Confidence 00 135789999999999975432100 0111122222111 0010000 0011123456789
Q ss_pred HHHHHHc--CCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccc-cccccccCCcchhhhHHHHHHHHHHhhcC
Q 010896 370 AKSLEDA--GVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKM-NGTKSMIGHGLGAAGGLEAITTIKAITTG 445 (498)
Q Consensus 370 ~~Al~~A--gl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v-~s~K~~~Gh~~~AaG~~~li~a~~~L~~g 445 (498)
+++|+++ |++++|||++-.|-.+....| .+.+.++- ..++.. ..+-..+||+.+|+=.+.|..+ ++++
T Consensus 266 ~~~L~~~~~g~~~~did~~~~H~~~~~i~~-----~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~---~~~g 337 (361)
T cd00831 266 RKLLARLGIGLFKLAFDHWCVHPGGRAVLD-----AVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYM---EAKG 337 (361)
T ss_pred HHHhccccCCCccccceEEEECCCChHHHH-----HHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHH---HHhC
Confidence 9999999 999999999999976654433 34555542 112221 1344678999988866666554 3333
Q ss_pred ccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEE
Q 010896 446 WLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 493 (498)
Q Consensus 446 ~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl 493 (498)
.+. +.+.++..+||.|-+..++++
T Consensus 338 ~~~------------------------~Gd~vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 338 RVK------------------------RGDRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred CCC------------------------CCCEEEEEEEcCCceeeeeeC
Confidence 321 235677789998877666653
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >PLN03171 chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.3e-11 Score=123.37 Aligned_cols=260 Identities=13% Similarity=0.109 Sum_probs=148.1
Q ss_pred CHHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHH
Q 010896 154 DDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLA 233 (498)
Q Consensus 154 d~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia 233 (498)
+....|+.+|+++||+++|++ ++++| -|+++++.+ .. .+..+.++.
T Consensus 106 ~~a~~la~~Aa~~aL~~ag~~---~~dId----~li~~t~t~--------------------------~~-~P~~a~~v~ 151 (399)
T PLN03171 106 DAVPELAAEAAKKAIAEWGRP---AADIT----HLVVTTNSG--------------------------AH-IPGVDFRLV 151 (399)
T ss_pred HHHHHHHHHHHHHHHHHcCCC---HHHCC----EEEEEcCCC--------------------------CC-CCchHHHHH
Confidence 456689999999999999994 44554 456665321 11 235577899
Q ss_pred HhhcCCCC---ccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCC
Q 010896 234 IDTGLMGP---NYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDK 310 (498)
Q Consensus 234 ~~lgl~Gp---~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~ 310 (498)
..||++.. .+.+..+|++++.+|..|..+|++|..+.|||.++|....- +. +.... .++.
T Consensus 152 ~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~li~~~~~~~vLVv~~e~~s~~-----------~~-----~~d~~-~~~~ 214 (399)
T PLN03171 152 PLLGLRPSVRRTMLHLNGCFAGAAALRLAKDLAENNRGARVLVVAAEITLLL-----------FN-----GPDEG-CFQT 214 (399)
T ss_pred HHhCCCcccceeeccCCccHHHHHHHHHHHHHHHhCCCCeEEEEEEeccccc-----------cC-----CCCcc-cHHh
Confidence 99999753 34566799999999999999999999999999999962100 00 00000 0111
Q ss_pred CCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCC--------------CCCCC-CCChHHHHHHHHHHHHH
Q 010896 311 DRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAH--------------HMTDP-RSDGLGVSSCIAKSLED 375 (498)
Q Consensus 311 ~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~--------------~~~~p-~~~~~~~~~~i~~Al~~ 375 (498)
.-.+.++||||+|+||++.+...+++ +..|.......+.. ....- ..-...+.+.+++++++
T Consensus 215 ~v~~~LFGDGAaA~vl~~~~~~~~~~---~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~vp~~i~~~l~~~l~~ 291 (399)
T PLN03171 215 LLNQGLFGDGAAAVIVGADADAAERP---LFEIVSAAQAIIPESDDAINMHFTEGGLDGNIGTRQVPGLIGDNIERCLLD 291 (399)
T ss_pred hhccccccCccEEEEEecCCCCCCCC---ceEEEEeeeEEecCCchheEEEEEcCCceEEECchhHHHHHHHHHHHHHHH
Confidence 12367899999999999744221111 12333322211111 00000 01112333444666554
Q ss_pred ---------cCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCccccc-ccccccCCcchhhhHHHHHHHHHHhhc
Q 010896 376 ---------AGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMN-GTKSMIGHGLGAAGGLEAITTIKAITT 444 (498)
Q Consensus 376 ---------Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~-s~K~~~Gh~~~AaG~~~li~a~~~L~~ 444 (498)
+|++++||+++ .|--+-. -.+.+.+.++- ...++.+ .+-..+|++.+|+=.+.|-..+...+.
T Consensus 292 ~l~~~~~~~~g~~~~di~~~-~Hq~~~~-----il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~ 365 (399)
T PLN03171 292 AFAPLLGGDGGAEWNDLFWA-VHPGSSA-----ILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDELRRQMEE 365 (399)
T ss_pred HHHhhcccccCCCcccceEE-EcCCcHH-----HHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhh
Confidence 58889999998 6854433 23345555542 1222221 234568998876644434332221111
Q ss_pred CccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 445 GWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 445 g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
+ +. .....+.++..+||.|=+-..++|+.
T Consensus 366 ~-~~---------------------~G~~~d~vll~~fG~Glt~~~~ll~~ 394 (399)
T PLN03171 366 A-AA---------------------AGAWPELGVMMAFGPGLTVDAMLLHA 394 (399)
T ss_pred c-CC---------------------CCCCcceEEEEEEcccHHHHHHHhhc
Confidence 0 00 00012567778999887766666653
|
|
| >PLN03169 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=6e-11 Score=122.04 Aligned_cols=258 Identities=13% Similarity=0.077 Sum_probs=152.5
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+.+|+++||+++|++ ++++| -++++++. ++..+..+..|...
T Consensus 106 ~~~La~~Aa~~aL~~ag~~---~~dId----~lI~~t~t---------------------------~~~~P~~a~~l~~~ 151 (391)
T PLN03169 106 VTQMAVEASLACIKEWGRP---VSDIT----HLVYVSSS---------------------------EARLPGGDLYLAKQ 151 (391)
T ss_pred HHHHHHHHHHHHHHHhCCC---HHHCC----EEEEECcC---------------------------CCCCCcHHHHHHHH
Confidence 4589999999999999994 44554 45565531 12234557789999
Q ss_pred hcCCCC---ccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCC
Q 010896 236 TGLMGP---NYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDR 312 (498)
Q Consensus 236 lgl~Gp---~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~ 312 (498)
||++.. .+.+..+|++++.+|..|..+|++|..+.+||.++|... . .+.. +.. .+ ++...
T Consensus 152 LGl~~~~~~~~d~~~gC~g~~~aL~~A~~~~~~~~~~~vLvv~~e~~s-~----~~~~----------~~~-~~-~~d~~ 214 (391)
T PLN03169 152 LGLSPDVQRVMLYFLGCSGGVAGLRVAKDIAENNPGSRVLLTTSETTI-L----GFRP----------PSP-DR-PYDLV 214 (391)
T ss_pred hCcCCcceeeecccChhHHHHHHHHHHHHHHHhCCCCeEEEEEEEcCh-h----hccC----------CCc-cc-hhhhh
Confidence 999753 367889999999999999999999999999999999621 1 0000 000 01 12223
Q ss_pred CCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEE--ecC------------CCC----CCCCCCChHHHHHHHHHHHH
Q 010896 313 DGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAV--TCD------------AHH----MTDPRSDGLGVSSCIAKSLE 374 (498)
Q Consensus 313 ~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~--~~d------------g~~----~~~p~~~~~~~~~~i~~Al~ 374 (498)
...++||||+|+||+..+... ....++ .+..... ..+ +.. ...|......+..+++++|+
T Consensus 215 ~~~lFGDGAaA~vl~~~~~~~-~~~~~~-~l~~~~~~~ip~~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~ 292 (391)
T PLN03169 215 GAALFGDGAAAVIIGADPIPV-SESPFF-ELHTAIQQFLPGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMK 292 (391)
T ss_pred hhhhccCceEEEEEecCCCcc-cCCcce-EEEeeeeeEcCCCccccCceecCCceEEEECcHHHHHHHHHHHHHHHHHHH
Confidence 456899999999998643210 011111 2221111 000 000 00011112345667899999
Q ss_pred HcCCCCCCcC--EEEccCCCCccCcHHHHHHHHHHhcC-CCccccc-ccccccCCcchhhhHHHHHHHHHHhhcCccCCC
Q 010896 375 DAGVSPEEVN--YVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMN-GTKSMIGHGLGAAGGLEAITTIKAITTGWLHPT 450 (498)
Q Consensus 375 ~Agl~~~dId--~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~-s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~ 450 (498)
++|++++||| ++-.|-.+... .+++.+.++- ...+..+ .+-..+||+.+|+=.+.|-.. ++.+.+-+
T Consensus 293 ~~gl~~~did~~~~v~Hq~n~~i-----l~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~---~~~~~~~~- 363 (391)
T PLN03169 293 KAGLVEKDYNDLFWAVHPGGPAI-----LNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYM---REELKKKG- 363 (391)
T ss_pred HcCCCCCCCCcceEEecCCCHHH-----HHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHH---HHhhcccC-
Confidence 9999999999 88889555333 3345555542 1222211 234568998877643333222 22222100
Q ss_pred CCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 451 LNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 451 ~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
..+.+.++..+||.|=+...++|+.
T Consensus 364 --------------------~~~gd~~ll~afG~G~s~~~~ll~~ 388 (391)
T PLN03169 364 --------------------EEDEEWGLILAFGPGITFEGILARN 388 (391)
T ss_pred --------------------CCCCcEEEEEEEcccHhHHHHHHhh
Confidence 0123567778888876666666653
|
|
| >PLN03170 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.3e-11 Score=124.12 Aligned_cols=331 Identities=12% Similarity=0.094 Sum_probs=186.7
Q ss_pred cEEEEeeceecCCC-CCHHHHHHHHHcCC--CCcccCCC-----CCCCCCCcccccccCC---CCCCC--CCCccccccC
Q 010896 87 RIVITGMGLVSVFG-SDIDKFYNKLLEGE--SGISPIDR-----FDASSFSVRFGGQIRD---FSSKG--YIDGKNDRRL 153 (498)
Q Consensus 87 ~V~ItG~g~~~p~g-~~~~~~~~~L~~g~--~~i~~~~~-----~~~~~~~~~~~g~i~~---~d~~~--~i~~~~~~~~ 153 (498)
+..|.|+|...|.- ...+++++.+.+-- .......+ |+..+...|+....++ +++.+ +..|....++
T Consensus 20 ~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~ 99 (401)
T PLN03170 20 PATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDARQ 99 (401)
T ss_pred CeEEEEEeecCCCccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHHHHH
Confidence 47799999999986 45555666554421 01111111 2333333333322111 11111 1223333333
Q ss_pred ----CHHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhH
Q 010896 154 ----DDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGS 229 (498)
Q Consensus 154 ----d~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a 229 (498)
.-...|+.+|+++||+++|++ +++++ -+++.++.+ . ..+..+
T Consensus 100 ~~~~~~a~~La~~Aa~~AL~~ag~~---~~dId----~lI~~T~Tg-~--------------------------~~Ps~a 145 (401)
T PLN03170 100 DIVVVEVPKLGKAAAQKAIKEWGQP---KSKIT----HLVFCTTSG-V--------------------------DMPGAD 145 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCC---HHHCC----EEEEEccCC-C--------------------------CCChHH
Confidence 334479999999999999994 44454 355555321 0 123478
Q ss_pred HHHHHhhcCCCC---ccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCC
Q 010896 230 ALLAIDTGLMGP---NYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASR 306 (498)
Q Consensus 230 ~~ia~~lgl~Gp---~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~r 306 (498)
.+|...||++.- .+.+..+|++++.+|..|.++++++....|||.++|... . . +. .|+. .+
T Consensus 146 ~~l~~~LGl~~~~~r~~d~~~gC~G~~~aL~~A~~l~~~~~~~~vLVV~~E~~S-~-~---------~~----~~~~-~~ 209 (401)
T PLN03170 146 YQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITA-V-T---------FR----GPSE-SH 209 (401)
T ss_pred HHHHHHhCcCcccHHHHhhcChhHHHHHHHHHHHHHHHcCCCCeEEEEEEehhh-h-c---------cC----Cccc-ch
Confidence 889999999864 478999999999999999999999999999999999621 0 0 00 0110 00
Q ss_pred cCCCCCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEE--------------ecCCCC--C--CCCCCChHHHHHH
Q 010896 307 PWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAV--------------TCDAHH--M--TDPRSDGLGVSSC 368 (498)
Q Consensus 307 pfd~~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~--------------~~dg~~--~--~~p~~~~~~~~~~ 368 (498)
++......++||||+|+||+..+.. .......++..... ..+|.. + ..|......+...
T Consensus 210 -~~~~~~~~LFGDGAaAvVl~~~~~~--~~~~~~~~l~~~~~~~~p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~ 286 (401)
T PLN03170 210 -LDSMVGQALFGDGAAAVIVGADPDE--RVERPLFQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERS 286 (401)
T ss_pred -hhhhhhhhhhhceeEEEEEecCCcc--cccCCceEEeeccceEecCCcccccceEEcCCeEEEEehHHHHHHHHHHHHH
Confidence 1111234689999999999864321 00111112332211 111110 0 0111122345668
Q ss_pred HHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCccc-ccccccccCCcchhhhHHHHHHHHHH-hhcC
Q 010896 369 IAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMK-MNGTKSMIGHGLGAAGGLEAITTIKA-ITTG 445 (498)
Q Consensus 369 i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~-v~s~K~~~Gh~~~AaG~~~li~a~~~-L~~g 445 (498)
++++|+++|++.+||+++-.|--|...- +++.+.++- ...+. ...+-..+||+.+|+=.+-|-+.... ++.|
T Consensus 287 v~~~L~~~gl~~~di~~~v~Hqgg~~il-----~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g 361 (401)
T PLN03170 287 LEEAFKPLGITDYNSIFWVAHPGGPAIL-----DQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDG 361 (401)
T ss_pred HHHHHHhcCCCccccCeEEecCCcHHHH-----HHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcC
Confidence 9999999999999999999996554433 344455442 11121 11345678998877644444433211 1222
Q ss_pred ccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEeeC
Q 010896 446 WLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 446 ~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
.+.+ ....+.++..+||.|=+-..++|+..
T Consensus 362 ~~~~---------------------G~~~~~~ll~afGpG~t~~~~ll~~~ 391 (401)
T PLN03170 362 QATT---------------------GEGFDWGVLFGFGPGLTVETVVLHSV 391 (401)
T ss_pred CCCC---------------------CCCccEEEEEEeCchHhHHhHHheec
Confidence 2210 01125677889998877777777763
|
|
| >TIGR02845 spore_V_AD stage V sporulation protein AD | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.6e-11 Score=117.04 Aligned_cols=175 Identities=18% Similarity=0.198 Sum_probs=118.3
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+.+|+++||++||+ .++++| .+++|+. ++ ....+..++..
T Consensus 50 e~eLa~eAa~~ALekAGL---~~~DID----~IIvGdl---------------------------~~--Q~~~As~vA~~ 93 (327)
T TIGR02845 50 ERKLMEDAVNLALKKANL---KKDDVD----FFLAGDL---------------------------LN--QIITANFVARD 93 (327)
T ss_pred HHHHHHHHHHHHHHHcCC---CHHHCC----EEEEeCC---------------------------CC--cccHHHHHHHH
Confidence 347999999999999999 445555 4666631 01 11246678888
Q ss_pred hcCCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcC--CCCCC
Q 010896 236 TGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPW--DKDRD 313 (498)
Q Consensus 236 lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpf--d~~~~ 313 (498)
||+ |.+.|.++|+|+..||..|..+|++|.+|.+||++.+..-+.+.... . |. .| .+...
T Consensus 94 LGI--P~fdV~~ACSTf~~AL~lAa~lI~SG~ad~VLVV~Ssh~S~AErqfr-----~-------p~----eyg~q~~~t 155 (327)
T TIGR02845 94 LGI--PFLGLYGACSTSMETLALGAMLVDGGFADRVLAATSSHYATAERQFR-----Y-------PT----EYGVQKPPT 155 (327)
T ss_pred hCC--CEEEEeccCHHHHHHHHHHHHHHhCCCCCEEEEEEecccchhhhhcc-----c-------cc----ccccCCCCe
Confidence 887 88999999999999999999999999999999999886322211100 0 10 11 11244
Q ss_pred CccccceeEEEEEcchHHHHhcCCcEE----EEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEcc
Q 010896 314 GFVMGEGCGILVMESLEHAMKRGANII----AEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAH 389 (498)
Q Consensus 314 G~v~gEGaaavvLe~~~~A~~~g~~i~----a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~h 389 (498)
...+++|||++||++.+ .+.+|- ++|..++.. |...+. ....++....|.+-|++.|.+|+|.|.|..-
T Consensus 156 a~~tgdGAGA~vl~~~~----~~~~i~~~t~gkv~d~g~~-d~~nmg--aamapaa~dti~~h~~d~~~~~~~yd~i~tg 228 (327)
T TIGR02845 156 AQWTVTGAGAVLLASTG----GGPRITSATIGKVVDYGIT-DPLDMG--AAMAPAAADTIEAHFKDTGRSVDDYDLIVTG 228 (327)
T ss_pred eeEEEcccEEEEEeecC----CCCceEEEEEEEEEecCCC-Ccccch--hhhhHHHHHHHHHHHHHcCCChhhccEEEec
Confidence 57799999999998642 233332 233333332 111111 1233455778999999999999999999765
Q ss_pred CC
Q 010896 390 AT 391 (498)
Q Consensus 390 gt 391 (498)
..
T Consensus 229 dl 230 (327)
T TIGR02845 229 DL 230 (327)
T ss_pred ch
Confidence 33
|
Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. |
| >PLN03173 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.4e-10 Score=119.06 Aligned_cols=291 Identities=13% Similarity=0.097 Sum_probs=165.4
Q ss_pred CcEEEEeeceecCCC-CCHHHHHHHHHcCC-----CCccc-CCC-CCCCCCCcccccccCC---CCCCCC--CCcccccc
Q 010896 86 KRIVITGMGLVSVFG-SDIDKFYNKLLEGE-----SGISP-IDR-FDASSFSVRFGGQIRD---FSSKGY--IDGKNDRR 152 (498)
Q Consensus 86 ~~V~ItG~g~~~p~g-~~~~~~~~~L~~g~-----~~i~~-~~~-~~~~~~~~~~~g~i~~---~d~~~~--i~~~~~~~ 152 (498)
.+..|.|+|...|.- ...+++++.+.+-- ..... +.+ |+..+...|+....++ .++..+ ..|....+
T Consensus 15 ~~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r 94 (391)
T PLN03173 15 GPATIMAIGTSTPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLDAR 94 (391)
T ss_pred CCeEEEEEEccCCCcccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHHHH
Confidence 347899999999976 45555555554322 11111 111 2333333333221111 011111 11222233
Q ss_pred C----CHHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhh
Q 010896 153 L----DDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMG 228 (498)
Q Consensus 153 ~----d~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~ 228 (498)
+ .-...|+.+|+++||+++|++ +++++ -+++.++.+ . . .+..
T Consensus 95 ~~~~~~~a~~La~~Aa~~AL~~ag~~---~~dId----~li~~t~t~-~---------------------~-----~P~~ 140 (391)
T PLN03173 95 QDMVVVEVPKLGKEAAAKAIKEWGQP---KSKIT----HLVFCTTSG-V---------------------D-----MPGA 140 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCC---HHHCC----EEEEEccCC-C---------------------c-----ccHH
Confidence 3 334589999999999999994 44454 355555321 0 1 2346
Q ss_pred HHHHHHhhcCCCC---ccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCC
Q 010896 229 SALLAIDTGLMGP---NYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRAS 305 (498)
Q Consensus 229 a~~ia~~lgl~Gp---~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~ 305 (498)
+.+|...||++.- .+.+..+|++++.+|..|.++++.+..+.+||.++|.+. . .| .. +++
T Consensus 141 a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S-~----~~-----~~-----~~d-- 203 (391)
T PLN03173 141 DYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITA-V----TF-----RG-----PSD-- 203 (391)
T ss_pred HHHHHHHhCCCccceeeehhcCccHHHHHHHHHHHHHHHhCCCCeEEEEEEehhh-h----hh-----CC-----ccc--
Confidence 7889999999863 356799999999999999999999999999999999621 0 00 00 000
Q ss_pred CcCCCCCCCccccceeEEEEEcchHHHHhcCC-cEEEEEEeEEE----ec----------CCCC--C--CCCCCChHHHH
Q 010896 306 RPWDKDRDGFVMGEGCGILVMESLEHAMKRGA-NIIAEYLGGAV----TC----------DAHH--M--TDPRSDGLGVS 366 (498)
Q Consensus 306 rpfd~~~~G~v~gEGaaavvLe~~~~A~~~g~-~i~a~I~g~~~----~~----------dg~~--~--~~p~~~~~~~~ 366 (498)
+..+..-...++||||+|+||+..+. .+. .+.-+|.+... .+ .|.+ + ..|..-...+.
T Consensus 204 ~~~~~~v~~~LFGDGAaAvvl~~~~~---~~~~~~~~~l~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~~~ 280 (391)
T PLN03173 204 THLDSLVGQALFGDGAAAIIIGSDPV---LGVEKPLFELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNVE 280 (391)
T ss_pred cchhhhhhhhhhcCceEEEEEeCCCC---CCcCCcceEEEeeeeEEecCCccceeeEEEcCceEEEEecHHHHHHHHHHH
Confidence 00001123477999999999986331 111 11113332221 11 1111 0 11111233566
Q ss_pred HHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccc-cccccccCCcchhhhHHHH
Q 010896 367 SCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKM-NGTKSMIGHGLGAAGGLEA 435 (498)
Q Consensus 367 ~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v-~s~K~~~Gh~~~AaG~~~l 435 (498)
..+++.|++.|++.+||+++-.|--|...-| ++.+.++- ...+.. ..+-..+|++-+|+=..-|
T Consensus 281 ~~i~~~L~~~gl~~~di~~~v~Hqgg~~Il~-----~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL 346 (391)
T PLN03173 281 KSLTEAFKPLGISDWNSLFWIAHPGGPAILD-----QVEAKLALKPEKLRATRHVLSEYGNMSSACVLFIL 346 (391)
T ss_pred HHHHHHHHhcCCCccccCeEEECCCcHHHHH-----HHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHH
Confidence 7899999999999999999999966655433 45555542 112221 1345668888877633333
|
|
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.4e-10 Score=117.34 Aligned_cols=333 Identities=14% Similarity=0.104 Sum_probs=182.0
Q ss_pred CcEEEEeeceecCCC-CCHHHHHHHHHcCCC-----Cccc-CCC-CCCCCCCcccccccC---CCCCCC--C----CCcc
Q 010896 86 KRIVITGMGLVSVFG-SDIDKFYNKLLEGES-----GISP-IDR-FDASSFSVRFGGQIR---DFSSKG--Y----IDGK 148 (498)
Q Consensus 86 ~~V~ItG~g~~~p~g-~~~~~~~~~L~~g~~-----~i~~-~~~-~~~~~~~~~~~g~i~---~~d~~~--~----i~~~ 148 (498)
.+..|.|+|...|.- ...+++++.+.+--. .... +.+ |+..+...|+....+ ++.+.+ + +..+
T Consensus 14 ~~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps~~~r 93 (389)
T PLN03168 14 GPACVLGIGTAVPPAEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPSLNVR 93 (389)
T ss_pred CCeEEEEEeccCCCcccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCCHHHH
Confidence 457899999999976 455555555543211 1111 110 122222222221111 011111 1 1222
Q ss_pred ccccCCHHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhh
Q 010896 149 NDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMG 228 (498)
Q Consensus 149 ~~~~~d~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~ 228 (498)
......-...|+.+|+++||+++|+ ++++++ -++++|+.+ ...+..
T Consensus 94 ~~~~~~~a~~La~~Aa~~AL~~ag~---~~~dId----~lI~~T~Tg---------------------------~~~Ps~ 139 (389)
T PLN03168 94 HDIVVVQVPKLAAEAAQKAIKEWGG---RKSDIT----HIVFATTSG---------------------------VNMPGA 139 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC---CHHHCC----EEEEECCCC---------------------------CCCccH
Confidence 2233345568999999999999999 444555 466666422 112446
Q ss_pred HHHHHHhhcCCCC---ccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCC
Q 010896 229 SALLAIDTGLMGP---NYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRAS 305 (498)
Q Consensus 229 a~~ia~~lgl~Gp---~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~ 305 (498)
+.+|+..||++.- .+.+..+|++++.+|..|..+|++|....|||.++|.+. . .|. . ++.
T Consensus 140 a~~l~~~LGl~~~~~r~~d~~~gC~g~~~aL~~A~~~i~~~~~~~VLVV~~E~~S-~----~~~------~----~~~-- 202 (389)
T PLN03168 140 DHALAKLLGLKPTVKRVMMYQTGCFGGASVLRVAKDLAENNKGARVLAVASEVTA-V----TYR------A----PSE-- 202 (389)
T ss_pred HHHHHHHhCcCCcceeeeeeCCccHHHHHHHHHHHHHHHhCCCCEEEEEEEehhh-h----hcc------C----ccc--
Confidence 8889999999863 578999999999999999999999999999999999621 1 000 0 000
Q ss_pred CcCCCCCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEE-e--cCCC----------CC--CC--CCCChHHHHHH
Q 010896 306 RPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAV-T--CDAH----------HM--TD--PRSDGLGVSSC 368 (498)
Q Consensus 306 rpfd~~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~-~--~dg~----------~~--~~--p~~~~~~~~~~ 368 (498)
...+..-...++||||+|+||+..+... ....++........ . +++. +. .. |..-...+...
T Consensus 203 ~~~~~~~~~~LFGDGAaAvvl~~~~~~~-~~~~~~~~~~~~~~~~p~s~~~~~~~~~~~g~~~~l~~~vp~~i~~~~~~~ 281 (389)
T PLN03168 203 NHLDGLVGSALFGDGAGVYVVGSDPKPE-VEKALFEVHWAGETILPESDGAIDGHLTEAGLIFHLMKDVPGLISKNIEKF 281 (389)
T ss_pred ccHHHHhccccccCccEEEEEecCCCCc-cCCcceEEEeeeeEEEcCCCCccCceEecCceEEEECHHHHHHHHHHHHHH
Confidence 0011112457899999999998643210 01122222221110 0 1111 00 00 11112344667
Q ss_pred HHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccc-cccccccCCcchhhhHHHHHHHHHHhhcCc
Q 010896 369 IAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKM-NGTKSMIGHGLGAAGGLEAITTIKAITTGW 446 (498)
Q Consensus 369 i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v-~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ 446 (498)
++++|+..|+...|++++-.|--|-..-| ++.+.++- ...+.. ..+-..+|++-+|+=.+-| ..+..+.
T Consensus 282 l~~~l~~~~~~~~d~~~~v~Hqgg~~Il~-----~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL----~~~~~~~ 352 (389)
T PLN03168 282 LNEARKCVGSPDWNEMFWAVHPGGPAILD-----QVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVL----DQIRQRS 352 (389)
T ss_pred HHHHHHhcCCCccccceEEecCCcHHHHH-----HHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHH----HHHHHHH
Confidence 77888888888888888889966655433 44444442 112221 1245678888777633333 3333222
Q ss_pred cCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 447 LHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 447 ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
+-+.. .....+.+.++..+||-|=+...++|+-
T Consensus 353 ~~~g~----------------~~~~~g~~~~ll~afGpG~t~~~~llr~ 385 (389)
T PLN03168 353 VKMGA----------------STLGEGSEFGFFIGFGPGLTLEVLVLRA 385 (389)
T ss_pred hhcCC----------------CCCCCCccEEEEEEEcchhhhhhhhhee
Confidence 11000 0000122567778888877766666654
|
|
| >TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.5e-09 Score=111.40 Aligned_cols=210 Identities=14% Similarity=0.142 Sum_probs=132.2
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+++|+++||+++ ++ ++++ -+++++..+. ......+.+|...|
T Consensus 50 ~~la~~Aa~~aL~~a--~~---~~Id----~li~~t~s~~--------------------------~~~~s~a~~v~~~L 94 (379)
T TIGR01835 50 VTMAASAAKPILDRN--DK---QKID----MVIFGTESGI--------------------------DQSKAAAVYVHGLL 94 (379)
T ss_pred HHHHHHHHHHHHHhC--CH---hhCC----EEEEEeCCCC--------------------------CCCCCHHHHHHHHh
Confidence 579999999999998 22 3444 4667764221 12234677888999
Q ss_pred cCCC--CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCC
Q 010896 237 GLMG--PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDG 314 (498)
Q Consensus 237 gl~G--p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G 314 (498)
|+++ +.+.+..+|++++.||..|..+|++|..+.+||.+.|.... . .....-
T Consensus 95 gl~~~~~~~dv~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~a~~------------------------~--~~~~~~ 148 (379)
T TIGR01835 95 GLQPFCRSFELKQACYGATAALQMAKGHVALSPDRKVLVIASDIAKY------------------------G--LESPGE 148 (379)
T ss_pred CCCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCeEEEEEeehhhc------------------------c--cCCCCC
Confidence 9975 67889999999999999999999999999999999985100 0 001112
Q ss_pred ccccceeEEEEEcchHHHHhcCCcEEEEEEeEEE-ecCCCCCCC------CCCChH--------HHHHHHHHHHHHcCCC
Q 010896 315 FVMGEGCGILVMESLEHAMKRGANIIAEYLGGAV-TCDAHHMTD------PRSDGL--------GVSSCIAKSLEDAGVS 379 (498)
Q Consensus 315 ~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~-~~dg~~~~~------p~~~~~--------~~~~~i~~Al~~Agl~ 379 (498)
...||||+|+||++. ..+...-.+... ..+...... |..++. .+..++++.|+++|++
T Consensus 149 ~~~GdGA~A~Ll~~~-------~~i~~~~~~~~~~t~~~~df~~p~~~~~~~v~g~~s~~~y~~~~~~~~~~~l~~~g~~ 221 (379)
T TIGR01835 149 PTQGAGAVAMLVSAD-------PKLLAINEDSVLYTDDIMDFWRPNYSTTALVDGQYSNEQYLNAFENAWNDYAKRTGLS 221 (379)
T ss_pred ccccCccEEEEEecC-------CCeeEEeccceeeecCCCCccCCCCCCceeECcHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 458999999999853 123221111111 111111111 111222 3457889999999999
Q ss_pred CCCcCEEEccCCCCccCcHHHHHHHHHHhcCCC-c----cc-----ccccccccCCcchhhhHHHHHHH
Q 010896 380 PEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTS-E----MK-----MNGTKSMIGHGLGAAGGLEAITT 438 (498)
Q Consensus 380 ~~dId~i~~hgtgt~~~D~~E~~al~~~f~~~~-~----~~-----v~s~K~~~Gh~~~AaG~~~li~a 438 (498)
++|||++..|-..++.+-+ +++++.+... + +. -.-.-..+||+.+|+=.+.|...
T Consensus 222 ~~did~~i~H~p~~~~~~k----~~~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~ 286 (379)
T TIGR01835 222 LADFAAFCFHVPFTKMGLK----ALRHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASL 286 (379)
T ss_pred HHHcCEEEECCCCCcHHHH----HHHHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHH
Confidence 9999999999766554322 2222221100 0 00 00123478999988866666554
|
This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. |
| >PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.1e-10 Score=113.65 Aligned_cols=90 Identities=30% Similarity=0.364 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
..|+.++++++|+++++ +++.++ .|++|+...... ...++..++...
T Consensus 27 ~~L~~~a~~~al~~~~i---~~~~Id----~v~~G~~~~~~~--------------------------g~~~ar~~~l~a 73 (264)
T PF00108_consen 27 EDLAAEAVKAALERAGI---DPEDID----AVIVGNVLQEGE--------------------------GQNIARQAALAA 73 (264)
T ss_dssp HHHHHHHHHHHHHHHTS---HGGGEE----EEEEE-SSSCTT--------------------------TCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhccc---chhhhh----hcCccccccccc--------------------------chhhhhhhhhhc
Confidence 47999999999999999 445555 588887533211 222344555566
Q ss_pred cCC--CCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccc
Q 010896 237 GLM--GPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAA 279 (498)
Q Consensus 237 gl~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~ 279 (498)
||. -|.++|+.+|+||+.||..|+..|++|+.|++|+||+|.+
T Consensus 74 Gl~~~vp~~~V~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~m 118 (264)
T PF00108_consen 74 GLPESVPATTVNRACASGLQAVHLAAMAIASGEADVVLAGGVESM 118 (264)
T ss_dssp TS-TTSEEEEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEET
T ss_pred ccccccceeeehhhhhHHHHHHHHhhhhhcCCCccEEEEeccccc
Confidence 663 3899999999999999999999999999999999999974
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B .... |
| >COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.8e-08 Score=100.14 Aligned_cols=214 Identities=21% Similarity=0.259 Sum_probs=142.3
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
..-|+++|++++|+++++ ++..++ .|++||..+... .-..+..|+..
T Consensus 51 ~vTmaveAA~~~l~r~~~---D~~~Ig----~v~vgTES~~d~--------------------------~K~~at~v~~~ 97 (377)
T COG3425 51 AVTMAVEAARNALKRADI---DPSKIG----AVIVGSESGPDA--------------------------VKPTATIVAEA 97 (377)
T ss_pred HHHHHHHHHHHHHhccCC---CHHHCc----eEEEecCCCccc--------------------------ccchHHHHHHH
Confidence 347999999999999988 333333 578887432211 12346678888
Q ss_pred hcCCCCc--cccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCC
Q 010896 236 TGLMGPN--YSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRD 313 (498)
Q Consensus 236 lgl~Gp~--~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~ 313 (498)
||+.--. +-+..+|-++..||+.|..++.+|..+.+||.|.|....- |.. .-
T Consensus 98 lg~~~~~~~~d~~~AC~agT~aL~~a~~~v~s~~~~~~LvI~sD~a~~~------------------~~~--------~~ 151 (377)
T COG3425 98 LGLNPSARAADVEFACYAGTAALQAAIGWVESGMISYGLVIGADTAQYA------------------PGD--------AL 151 (377)
T ss_pred hCCCCceehhhHHHHHHHHHHHHHHHHHHHHcCCccceEEEeehhhccC------------------CCc--------cc
Confidence 9986433 3377999999999999999999999999999999962100 111 11
Q ss_pred CccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEe-cCCCCCC------CCCCCh--------HHHHHHHHHHHHHcCC
Q 010896 314 GFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVT-CDAHHMT------DPRSDG--------LGVSSCIAKSLEDAGV 378 (498)
Q Consensus 314 G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~-~dg~~~~------~p~~~~--------~~~~~~i~~Al~~Agl 378 (498)
-+.-|.|++|+|+.. ...+.+++.+.... .|-...- .|..++ ..+..+.+..+++.|+
T Consensus 152 E~t~GAGavA~lIg~-------n~~~~a~~~~~~syt~d~~DFwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gl 224 (377)
T COG3425 152 EYTAGAGAVAFLIGK-------NPPIVAEFEGTGSYTTDTPDFWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGL 224 (377)
T ss_pred CccCCCceEEEEEcc-------CCCeEEEecCceEEecCCCcccccCCCcccccCceecHHHHHHHHHHHHHHHHHHhCC
Confidence 244688999999984 23455666555433 3322211 222222 3567788888899999
Q ss_pred CCCCcCEEEccCCCCccCcHHHHHHHHHHhcCCCccccc-ccccccCCcchhhhHHHHHHHH
Q 010896 379 SPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMN-GTKSMIGHGLGAAGGLEAITTI 439 (498)
Q Consensus 379 ~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~v~-s~K~~~Gh~~~AaG~~~li~a~ 439 (498)
+++|+||+..|-+-++. =..+++.+.-....+.-+ .....+|.+-.+|..++|+..+
T Consensus 225 s~~dfdy~vfH~P~~k~----~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L 282 (377)
T COG3425 225 SPDDFDYIVFHQPNGKF----PKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLL 282 (377)
T ss_pred ChhhhCeEEecCCCCch----HHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHHHHHH
Confidence 99999999999877665 233444433221222222 2234799999999999998865
|
|
| >PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.3e-10 Score=97.23 Aligned_cols=121 Identities=21% Similarity=0.353 Sum_probs=87.2
Q ss_pred cEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccc
Q 010896 338 NIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKM 416 (498)
Q Consensus 338 ~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v 416 (498)
+|+++|.++.... ..|...+.+...+++++|+++|++++|||++|.|-..+.. +...+ +.++- ..++++
T Consensus 2 ~pla~i~~~~~~~-----~~P~~~~~~p~~A~~~al~~ag~~~~did~~Ei~EaFA~~----~l~~~-~~lg~~~~~vN~ 71 (123)
T PF02803_consen 2 KPLARIVGYASAG-----VDPEDMGLGPVPAARKALERAGLTPDDIDVIEINEAFAAQ----VLAFL-EALGLDPEKVNP 71 (123)
T ss_dssp -ESEEEEEEEEEE-------GGGGGGTHHHHHHHHHHHHT--GGGESEEEE--SBHHH----HHHHH-HHHTTGGGGBST
T ss_pred CeEEEEEEEEEEe-----cCHHHhCchHHHHHHHHHHHhCCCccccchhhccchhhhH----HHHhh-ccccccccccCc
Confidence 5789999998775 3455555566889999999999999999999999544322 22222 23332 457888
Q ss_pred cccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 417 NGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 417 ~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
++.--.+||+.||+|+..++.++.+|+.. ..++.+.+..+-||...++|||+
T Consensus 72 ~GG~la~GHP~gasG~r~~~~l~~~L~~~---------------------------~~~~gla~~~~ggG~g~a~ller 123 (123)
T PF02803_consen 72 NGGALALGHPLGASGARLVVELAHQLRRR---------------------------GGRYGLAAICAGGGQGSAVLLER 123 (123)
T ss_dssp T--HHHH-BHTTTHHHHHHHHHHHHHHHH---------------------------TTSEEEEEEEETTTEEEEEEEEE
T ss_pred ccccccccccccccccchhhhhHHHHHHh---------------------------chhhhhHHhcccceeeEEEEEEC
Confidence 88888899999999999999999999762 23678888889999999999986
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C .... |
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=99.08 E-value=3.3e-09 Score=103.74 Aligned_cols=175 Identities=18% Similarity=0.204 Sum_probs=115.9
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+.+|+++||++||+ +++++| .+++|+. .+. ...+..++..
T Consensus 56 eseLa~eAa~~ALekAGI---~~~DID----~lI~Gdl---------------------------l~Q--~~sAs~vA~~ 99 (337)
T PRK08304 56 ERKMMEDAIQQALQKANL---KKSDID----YLLAGDL---------------------------LNQ--IISANFAARE 99 (337)
T ss_pred HHHHHHHHHHHHHHHcCC---CHHHCC----EEEEECC---------------------------CCC--cchHHHHHHH
Confidence 357999999999999999 445565 4666641 011 1245567777
Q ss_pred hcCCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCc
Q 010896 236 TGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGF 315 (498)
Q Consensus 236 lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~ 315 (498)
||+ |.+.|.++|+|+..||..|+.+|++|.+|.+||++.+..-..+....| .+. -+.-||. .-.
T Consensus 100 LGI--Pa~dV~gACST~~~AL~lAa~lI~SG~ad~VLVV~Ssh~s~aerqfr~----P~e------yg~qrp~----taq 163 (337)
T PRK08304 100 LGI--PFLGLYGACSTMMESLALGSMLIDGGFADRVLAATSSHFATAERQFRF----PTE------YGGQRPP----TAQ 163 (337)
T ss_pred hCC--cEEEEeccCHHHHHHHHHHHHHHhcCCCCEEEEEEcchhhhhhhhccC----chh------ccccCCC----cce
Confidence 776 999999999999999999999999999999999999863322211100 000 0122332 224
Q ss_pred cccceeEEEEEcchHHHHhcCCcEE------EEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEcc
Q 010896 316 VMGEGCGILVMESLEHAMKRGANII------AEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAH 389 (498)
Q Consensus 316 v~gEGaaavvLe~~~~A~~~g~~i~------a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~h 389 (498)
..++|||++||.+. |..++ ++|..++.. |...+. ....++....|.+-|++.|.+|+|.|.|..-
T Consensus 164 wtvtGAGA~i~~~~------~~~~~i~~~t~Gkv~D~g~~-d~~nmg--aaMapAa~dti~~h~~d~~~~~~~yDli~tG 234 (337)
T PRK08304 164 WTVTGAGAVLLSRE------GSGPRITHATIGKVVDLGIK-DPNDMG--AAMAPAAADTIQQHFKDTGRSPEDYDLIVTG 234 (337)
T ss_pred EEeeccEEEEEecC------CCCceEEEEeEEEEEecCCC-Ccccch--hhhhHHHHHHHHHHHHHcCCChhhccEEEEc
Confidence 57899999999853 33333 223333322 111111 1233455778999999999999999999765
Q ss_pred CC
Q 010896 390 AT 391 (498)
Q Consensus 390 gt 391 (498)
..
T Consensus 235 Dl 236 (337)
T PRK08304 235 DL 236 (337)
T ss_pred ch
Confidence 33
|
|
| >PLN02854 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.5e-08 Score=106.22 Aligned_cols=315 Identities=13% Similarity=0.100 Sum_probs=176.5
Q ss_pred CCcEEEEeeceecCCC---CCHHHHHHHHHcCCCCcccCCCCCCCCCC--------cccccccCCCCCCCC-CCccc--c
Q 010896 85 KKRIVITGMGLVSVFG---SDIDKFYNKLLEGESGISPIDRFDASSFS--------VRFGGQIRDFSSKGY-IDGKN--D 150 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g---~~~~~~~~~L~~g~~~i~~~~~~~~~~~~--------~~~~g~i~~~d~~~~-i~~~~--~ 150 (498)
.++|+.+-+.|.-|.- .+.+.|.+....-. .|+.+.+. ... |+-.-+.+... ++++. .
T Consensus 111 ~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~f~~~~~~~sg~-g~~ty~P~~~~~~~~~~~~~ 182 (521)
T PLN02854 111 SKPVYLVDFACYKPEDERKISVDSFLTMTEENG-------SFEDETVQFQRRISTRSGL-GDETYLPRGITSRPPNLCME 182 (521)
T ss_pred CCcEEEEeeeeecCCccccccHHHHHHHHHHcC-------CCCHHHHHHHHHHHHhcCC-CCccccCccccCCCCcchHH
Confidence 5579999999999876 45677776665331 12211110 000 11000111111 33321 1
Q ss_pred ccCCHHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHH
Q 010896 151 RRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSA 230 (498)
Q Consensus 151 ~~~d~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~ 230 (498)
............++.++|+++|++ ++++| -+++.++ +....+..+.
T Consensus 183 ~~r~ea~~v~~~~~~~lL~kaGi~---p~dID----~LIv~cS---------------------------~~~p~PSlAa 228 (521)
T PLN02854 183 EARAEAEAVMFGALDSLFSKTGVK---PRDIG----ILIVNCS---------------------------LFNPTPSLSA 228 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCC---HHHCC----EEEEECC---------------------------CCCCCCCHHH
Confidence 222344567778899999999994 34444 2333321 1123456788
Q ss_pred HHHHhhcCCC--Cccccc-cccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCc
Q 010896 231 LLAIDTGLMG--PNYSIS-TACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRP 307 (498)
Q Consensus 231 ~ia~~lgl~G--p~~tv~-~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rp 307 (498)
.|...+|++. .++.++ .+|++++.+|..|.++|+.+....+||.++|.. +.. + .+
T Consensus 229 ~I~n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~~~~~~~aLVVstE~~-S~~-~--------------------y~ 286 (521)
T PLN02854 229 MIVNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLKANPNSYAVVVSTENI-TLN-W--------------------YF 286 (521)
T ss_pred HHHHHhCCCCCceEEecccchhhhHHHHHHHHHHHHHhCCCCeEEEEEEeee-ecC-C--------------------CC
Confidence 8999999984 467787 799999999999999999999999999999973 210 0 00
Q ss_pred CCCCCC---CccccceeEEEEEcchHHHHhc-CCcEEEEEEeEEEecC--------------CC---CCCC--CCCChHH
Q 010896 308 WDKDRD---GFVMGEGCGILVMESLEHAMKR-GANIIAEYLGGAVTCD--------------AH---HMTD--PRSDGLG 364 (498)
Q Consensus 308 fd~~~~---G~v~gEGaaavvLe~~~~A~~~-g~~i~a~I~g~~~~~d--------------g~---~~~~--p~~~~~~ 364 (498)
-++... ...+||||||+||++.+....+ ..++...+ .+....| |. ..+. +...+..
T Consensus 287 g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~~v-~t~~~ad~~~~~~i~~~~d~~G~~g~~lsk~l~~va~~~ 365 (521)
T PLN02854 287 GNDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVHTV-RTHKGADDKNYNCVYQREDDKGTIGVSLARELMAVAGDA 365 (521)
T ss_pred CCchhhhcceeeeccceeEEEEecccccccccchheeeEE-EEEEeeCCCccCeEEeccCCCCcccccccccccchhhhh
Confidence 011112 4678999999999864311000 01111111 1111111 10 0000 1000110
Q ss_pred ---------------------HHHHHHHHHHHcCCCC------CCcCEEEccCCCCccCcHHHHHHHHHHhcCC--Cccc
Q 010896 365 ---------------------VSSCIAKSLEDAGVSP------EEVNYVNAHATSTLAGDLAEVNAIKKVFKDT--SEMK 415 (498)
Q Consensus 365 ---------------------~~~~i~~Al~~Agl~~------~dId~i~~hgtgt~~~D~~E~~al~~~f~~~--~~~~ 415 (498)
....+++.|.++|+++ .|||++..|.-|...-| ++.+.++-. ..-+
T Consensus 366 l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~gl~~~~pd~~~didhf~iHqggr~IId-----~v~k~LgL~~~~~e~ 440 (521)
T PLN02854 366 LKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHAGGRAVLD-----ELQKNLQLSDWHMEP 440 (521)
T ss_pred hhhhhhhccccccchHHHHHHHHHHHHHHHHHcCCCccCCcccccCcEEEECCCCHHHHH-----HHHHHcCCCcccccc
Confidence 2456888899999997 69999999977655533 455544420 0112
Q ss_pred ccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 416 MNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 416 v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
.-..-..+|++-++|=...|... ++.|.+ .+.++++..+||.|=+..++|++.
T Consensus 441 sr~tL~rfGNTSSASI~~~L~~~---~~kGri------------------------k~GD~Vl~iaFGsGft~~sav~~~ 493 (521)
T PLN02854 441 SRMTLHRFGNTSSSSLWYELAYT---EAKGRV------------------------SAGDRVWQIAFGSGFKCNSAVWKA 493 (521)
T ss_pred hHHHhhhcCChHhhHHHHHHHHH---HHcCCC------------------------CCCCEEEEEEEchhhhhhheeeEE
Confidence 22333456887766533333332 223322 123567778999888877788765
Q ss_pred C
Q 010896 496 F 496 (498)
Q Consensus 496 ~ 496 (498)
.
T Consensus 494 ~ 494 (521)
T PLN02854 494 L 494 (521)
T ss_pred e
Confidence 3
|
|
| >PLN02577 hydroxymethylglutaryl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.99 E-value=1e-08 Score=106.39 Aligned_cols=177 Identities=16% Similarity=0.190 Sum_probs=109.8
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHH--
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLA-- 233 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia-- 233 (498)
...|++.|++++|+++|++ +++++ -|++||..+. ......+.+|.
T Consensus 53 ~~tmA~~AA~~aL~~agid---~~~Id----llivaTeT~~--------------------------d~~ps~A~~v~~l 99 (459)
T PLN02577 53 VISMSLTVVKSLLEKYNID---PKQIG----RLEVGSETVI--------------------------DKSKSIKTFLMQL 99 (459)
T ss_pred HHHHHHHHHHHHHHHcCCC---HHHCC----EEEEEcCCCC--------------------------CCCCchHHHHHHH
Confidence 4579999999999999994 44555 4777764321 11234455554
Q ss_pred -HhhcCCC-CccccccccchHHHHHHHHHHHHHcCCC--cEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCC
Q 010896 234 -IDTGLMG-PNYSISTACATANYCFYAAANHIRRGET--DIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWD 309 (498)
Q Consensus 234 -~~lgl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~--d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd 309 (498)
..+|.+. +++-+..+|.++..||..|..+|++|.. +.+||+|.|... . ...| .+
T Consensus 100 l~~LG~~~~~afDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a~---------------~-~~~~---~e--- 157 (459)
T PLN02577 100 FEESGNTDIEGVDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADSAV---------------Y-AEGP---AR--- 157 (459)
T ss_pred HHHhCCCCcEEeehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEechhh---------------c-cCCC---CC---
Confidence 3455544 6778999999999999999999999985 999999999611 0 0001 01
Q ss_pred CCCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCC-------CChH--------HHHHHHHHHHH
Q 010896 310 KDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPR-------SDGL--------GVSSCIAKSLE 374 (498)
Q Consensus 310 ~~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~-------~~~~--------~~~~~i~~Al~ 374 (498)
..-|+||+|+||++.+ .+ .+-....|..+. +......|. .+|+ .+..++++.++
T Consensus 158 -----~t~GdGA~A~lv~~~~----~~-~l~~~~~g~~~~-~~~Df~rP~~~~~~~~vdG~~s~~~yl~~~~~~~~~~~~ 226 (459)
T PLN02577 158 -----PTGGAGAVAMLVGPNA----PI-VFESKYRGSHMA-HVYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYKRFCE 226 (459)
T ss_pred -----CCCCcceEEEEEccCC----Cc-eeecccccccCc-ccchhcccCCCCCceEEcchHHHHHHHHHHHHHHHHHHH
Confidence 1239999999998522 10 010111111111 111111222 1332 33445555666
Q ss_pred Hc------CCCCCCcCEEEccCCCCccCcH
Q 010896 375 DA------GVSPEEVNYVNAHATSTLAGDL 398 (498)
Q Consensus 375 ~A------gl~~~dId~i~~hgtgt~~~D~ 398 (498)
+. |++++|+||+..|-.-+++.-+
T Consensus 227 k~~~~~~~g~~~~d~d~~vfHqP~~km~~k 256 (459)
T PLN02577 227 KYEKLEGKQFSISDADYFVFHAPYNKLVQK 256 (459)
T ss_pred HhhcccccCCCHHHcCEEEecCCccchhHH
Confidence 65 8899999999999887765433
|
|
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.97 E-value=7.3e-08 Score=100.97 Aligned_cols=179 Identities=12% Similarity=0.175 Sum_probs=113.2
Q ss_pred CCcEEEEeeceecCCC---CCHHHHHHHHHcCCCCcccCCCCCCCCCC--------cccccccCC-CCCC-CCCCccc--
Q 010896 85 KKRIVITGMGLVSVFG---SDIDKFYNKLLEGESGISPIDRFDASSFS--------VRFGGQIRD-FSSK-GYIDGKN-- 149 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g---~~~~~~~~~L~~g~~~i~~~~~~~~~~~~--------~~~~g~i~~-~d~~-~~i~~~~-- 149 (498)
.++|+.+-+.|.-|.- .+.+.|.+....- ..|+.+.+. ...+ + .. +++. .++++..
T Consensus 95 ~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~f~~ri~~~sgig-~-~t~~p~~~~~~~~~~~~ 165 (502)
T PLN02377 95 PRPVYLVDYSCYRAPDHLKAPFARFMEHSRLT-------GDFDDSSLEFQRKILERSGLG-E-DTYVPEAMHYIPPRPSM 165 (502)
T ss_pred CCCEEEEeeeeecCCccccccHHHHHHHHHHh-------CCCCHHHHHHHHHHHHhcCCC-C-ccccCchhccCCccchH
Confidence 4579999999999876 3566666665432 112211110 0111 1 00 1111 1122221
Q ss_pred cccCCHHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhH
Q 010896 150 DRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGS 229 (498)
Q Consensus 150 ~~~~d~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a 229 (498)
.........++..|+.+||+++|++ ++++| +++.++.+ ....+..+
T Consensus 166 ~~~~~ea~~l~~~A~~~aL~kaGi~---p~dID-----~LVv~cS~--------------------------~~~~PSla 211 (502)
T PLN02377 166 AAAREEAEQVMFGALDNLFANTNVN---PKDIG-----ILVVNCSL--------------------------FNPTPSLS 211 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCC---HHHCC-----EEEEECCC--------------------------CCCCCcHH
Confidence 1223345689999999999999994 44554 33333211 12345678
Q ss_pred HHHHHhhcCCC--Cccccc-cccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCC
Q 010896 230 ALLAIDTGLMG--PNYSIS-TACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASR 306 (498)
Q Consensus 230 ~~ia~~lgl~G--p~~tv~-~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~r 306 (498)
..|...||++. .++.++ .+|++++.+|..|.++|+.+....+||.++|.. +.. -
T Consensus 212 a~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA~~ll~~~~~~~aLVVstE~~-S~~----------------------~ 268 (502)
T PLN02377 212 AMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQVHRNTYAVVVSTENI-TQN----------------------W 268 (502)
T ss_pred HHHHHHhCCCCCCeEEecccchhhHHHHHHHHHHHHHHcCCCCEEEEEEEecc-ccc----------------------c
Confidence 89999999985 678898 599999999999999999999999999999962 111 0
Q ss_pred cCCCCCC----CccccceeEEEEEcch
Q 010896 307 PWDKDRD----GFVMGEGCGILVMESL 329 (498)
Q Consensus 307 pfd~~~~----G~v~gEGaaavvLe~~ 329 (498)
-++.++. ...+||||||+||+..
T Consensus 269 ~~~d~~s~lv~n~LFgDGAaAvlLs~~ 295 (502)
T PLN02377 269 YFGNKKSMLIPNCLFRVGGSAVLLSNK 295 (502)
T ss_pred CCCCCccccccceeeccccEEEEEecc
Confidence 0111122 3678999999999863
|
|
| >PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=98.93 E-value=9.1e-09 Score=96.23 Aligned_cols=124 Identities=22% Similarity=0.305 Sum_probs=111.1
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccc
Q 010896 143 GYIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPY 222 (498)
Q Consensus 143 ~~i~~~~~~~~d~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (498)
.+|++.+.|||++..||++.++.+++++.. .++ .+++++..|.+.......+.+.+. ..++|..|..
T Consensus 21 ~~lp~m~rRRls~~~rla~~~a~~~~~~~~-------~~d----~~VfaS~~Gel~~t~~ll~~l~~~--~~lSPT~Fs~ 87 (218)
T PF13723_consen 21 AFLPPMQRRRLSRLSRLALEAALECLAEDE-------QPD----AIVFASRHGELERTFKLLEALAEE--EELSPTAFSQ 87 (218)
T ss_pred ccCCHHHHcccCHHHHHHHHHHHHHHhccC-------CCC----cEEEEeCCCcHHHHHHHHHHHHhC--CCcCccchhh
Confidence 458999999999999999999999987521 112 689999999999999999998765 4699999999
Q ss_pred hhhhhhHHHHHHhhcCCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEecccccc
Q 010896 223 SITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAI 280 (498)
Q Consensus 223 ~~~n~~a~~ia~~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~ 280 (498)
++.|++++++++..+.++|+.++..+-.|...||..|+..+..| ++.||++.+|..+
T Consensus 88 SVHNA~aG~~sI~~~~~~~~tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~ 144 (218)
T PF13723_consen 88 SVHNAAAGYWSIATKNTGPNTALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPL 144 (218)
T ss_pred hhhhHHHHHHHHHhCCCCceEEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCC
Confidence 99999999999999999999999999999999999999999999 9999999999843
|
|
| >PRK12404 stage V sporulation protein AD; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=7.3e-08 Score=93.81 Aligned_cols=176 Identities=16% Similarity=0.185 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+.+|+++||++||+ .++++| -+++|+..+ ...++..++..
T Consensus 54 E~~L~~EA~~~AL~kAGI---~~~DID----~i~vGdL~n-----------------------------Q~ipssfvar~ 97 (334)
T PRK12404 54 ERKLLEEACSRAIEKAKL---RKEDIQ----FFLAGDLMN-----------------------------QITPTSFAART 97 (334)
T ss_pred HHHHHHHHHHHHHHHcCC---CHHHCC----EEEEEecCC-----------------------------CcCcHHHHHHH
Confidence 347999999999999999 445555 467775320 11233466777
Q ss_pred hcCCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCc
Q 010896 236 TGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGF 315 (498)
Q Consensus 236 lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~ 315 (498)
||+ |.+.|.++|+|+..||..|+.+|++|.+|.+||+.....-+.+....|- +. -+.-||....
T Consensus 98 LGI--P~~gV~gACSTg~eAL~lAa~~VaSG~Ad~VLavtsSH~~~aErqfR~P----~e------yG~Qrp~taq---- 161 (334)
T PRK12404 98 LGI--PYLGLFGACSTSMEGLALAALIVNSGGAKYVLTGASSHNAAVEKQFRYP----TE------YGGQKPPTAQ---- 161 (334)
T ss_pred hCC--CccceeecCHHHHHHHHHHHHHHHcCCCCEEEEEeCcccchhhhhccCc----cc------ccCcCCCccc----
Confidence 775 8899999999999999999999999999999999877643333221110 00 1233554332
Q ss_pred cccceeEEEEEcchHHHHhcCCcEE----EEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccC
Q 010896 316 VMGEGCGILVMESLEHAMKRGANII----AEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHA 390 (498)
Q Consensus 316 v~gEGaaavvLe~~~~A~~~g~~i~----a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hg 390 (498)
..--|+|++||.+. ..+.+|- ++|..++.. |...+. ....++....|.+-|++.|.+|+|.|.|..-.
T Consensus 162 wTvTgaga~~l~~~----~~~~~i~~~T~Gkv~D~g~~-d~~nMG--aaMAPAA~dti~~h~~d~~~~~~~yDlI~TGD 233 (334)
T PRK12404 162 WTVTGAGAAILSKT----GDGPRVTSATIGRVVDMGLT-DPFNMG--GAMAPAAVDTIEAHLRDRQIDASYYDLIVTGD 233 (334)
T ss_pred EEEEceEEEEEecC----CCCceEEEEEEEEEEecCCC-Ccccch--hhhhHHHHHHHHHHHHHhCCChhhccEEEEcc
Confidence 23457888888753 1222222 223333322 111111 12334557789999999999999999997653
|
|
| >TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade | Back alignment and domain information |
|---|
Probab=98.85 E-value=4.1e-07 Score=94.47 Aligned_cols=90 Identities=12% Similarity=0.139 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|++.|++.+|++++++ ++.++ -|++|+..+ .......+.+|...
T Consensus 50 ~~tma~~AA~~lL~~a~id---~~~Id----~Liv~TeS~--------------------------~d~sps~a~~v~~l 96 (454)
T TIGR01833 50 INSLCLTVVSKLMERYNID---YNQIG----RLEVGTETI--------------------------IDKSKSVKTVLMQL 96 (454)
T ss_pred HHHHHHHHHHHHHHHcCCC---HHHCC----EEEEECCCC--------------------------CCCCCchHHHHHHH
Confidence 4579999999999999994 44454 466776322 11233456677775
Q ss_pred hcC---CC-CccccccccchHHHHHHHHHHHHHcCCC--cEEEEecccc
Q 010896 236 TGL---MG-PNYSISTACATANYCFYAAANHIRRGET--DIMVAGGTEA 278 (498)
Q Consensus 236 lgl---~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~--d~alvgg~d~ 278 (498)
|++ +. .++.+..+|+++..||..|..+|++|.. +.+||.+.|.
T Consensus 97 L~~lG~~~~~~fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDi 145 (454)
T TIGR01833 97 FEESGNTDVEGIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDI 145 (454)
T ss_pred HHhcCCCCceEEeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEecc
Confidence 554 33 4667999999999999999999999974 8999999996
|
Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes. |
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.9e-07 Score=97.30 Aligned_cols=124 Identities=13% Similarity=0.104 Sum_probs=89.5
Q ss_pred CHHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHH
Q 010896 154 DDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLA 233 (498)
Q Consensus 154 d~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia 233 (498)
+....++..|+++||+++|++| +++| -+++.++.+ ...+..+..|.
T Consensus 146 ~ea~~la~~Aa~~aL~~agi~p---~dId----~lIv~tst~---------------------------~~~Pslaa~V~ 191 (478)
T PLN02932 146 KETEEVIIGAVDNLFRNTGISP---SDIG----ILVVNSSTF---------------------------NPTPSLSSILV 191 (478)
T ss_pred HHHHHHHHHHHHHHHHHcCCCH---HHCC----EEEEEccCC---------------------------CCCCcHHHHHH
Confidence 3466899999999999999944 4454 355555321 13456788899
Q ss_pred HhhcCCC--Cccccc-cccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCC
Q 010896 234 IDTGLMG--PNYSIS-TACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDK 310 (498)
Q Consensus 234 ~~lgl~G--p~~tv~-~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~ 310 (498)
..+|++. .++.++ .||++++.+|..|.++|+.+....+||.++|.+ +.... +.. .+. .
T Consensus 192 ~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~~-S~~~~---------------~~d-~r~--~ 252 (478)
T PLN02932 192 NKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTENI-TQNLY---------------LGN-NKS--M 252 (478)
T ss_pred HHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEeec-ccccC---------------CCc-chh--h
Confidence 9999973 678888 799999999999999999999999999999972 22110 000 000 0
Q ss_pred CCCCccccceeEEEEEcchH
Q 010896 311 DRDGFVMGEGCGILVMESLE 330 (498)
Q Consensus 311 ~~~G~v~gEGaaavvLe~~~ 330 (498)
.-....+||||+|+||+..+
T Consensus 253 l~t~~LFgDGAAAvlLs~~~ 272 (478)
T PLN02932 253 LVTNCLFRIGGAAILLSNRS 272 (478)
T ss_pred hccceeecccceEEEEeccc
Confidence 01347789999999999743
|
|
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.49 E-value=4.4e-07 Score=95.03 Aligned_cols=180 Identities=11% Similarity=0.110 Sum_probs=112.3
Q ss_pred CCcEEEEeeceecCCC---CCHHHHHHHHHcCCCCcccCCCCCCCCCC--------cccccccCCCCCCCC-CCcccc--
Q 010896 85 KKRIVITGMGLVSVFG---SDIDKFYNKLLEGESGISPIDRFDASSFS--------VRFGGQIRDFSSKGY-IDGKND-- 150 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g---~~~~~~~~~L~~g~~~i~~~~~~~~~~~~--------~~~~g~i~~~d~~~~-i~~~~~-- 150 (498)
.++|+.+-+.|.-|.- .+.+.|.+....- ..|+.+.+. ... |+-.-+.+..+ ++++..
T Consensus 99 ~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~f~~~~~~~sgl-g~~t~~p~~~~~~~~~~~~~ 170 (511)
T PLN02192 99 PRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLT-------GSFTEENLEFQRKILERSGL-GESTYLPEAVLNVPPNPCMA 170 (511)
T ss_pred CCcEEEEeeeeecCCccccccHHHHHHHHHHc-------CCCCHHHHHHHHHHHHhcCC-CCcccCChhhccCCCCccHH
Confidence 4579999999999876 4566666665432 112211110 000 11000111111 222211
Q ss_pred ccCCHHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHH
Q 010896 151 RRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSA 230 (498)
Q Consensus 151 ~~~d~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~ 230 (498)
........++..|+.+||+++|++ ++++| -+++.++ +....+..+.
T Consensus 171 ~~~~Ea~~~~~~Aa~~aL~kaGi~---p~DID----iLIv~~S---------------------------~~~~~PSlaa 216 (511)
T PLN02192 171 EARKEAETVMFGAIDQLLAKTSVK---PKDIG----ILIVNCS---------------------------LFNPTPSLSA 216 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCC---HHHCC----EEEEECC---------------------------CCCCCchHHH
Confidence 112335578889999999999994 44554 2333321 1223456788
Q ss_pred HHHHhhcCCC--Cccccc-cccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCc
Q 010896 231 LLAIDTGLMG--PNYSIS-TACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRP 307 (498)
Q Consensus 231 ~ia~~lgl~G--p~~tv~-~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rp 307 (498)
.|...+|++. .++.++ .+|++++.||..|.++|+.+....+||+++|.. +. .+.
T Consensus 217 ~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~a~~~~~aLVVstE~~-S~-n~y--------------------- 273 (511)
T PLN02192 217 MVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQVHPNSYALVISMENI-TL-NWY--------------------- 273 (511)
T ss_pred HHHHHhCCCCCceEEEcccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEEec-cc-cCC---------------------
Confidence 8999999984 688898 599999999999999999999999999999962 21 000
Q ss_pred CCCCCCC----ccccceeEEEEEcch
Q 010896 308 WDKDRDG----FVMGEGCGILVMESL 329 (498)
Q Consensus 308 fd~~~~G----~v~gEGaaavvLe~~ 329 (498)
+..+++- ..+||||||+||++.
T Consensus 274 ~g~drs~lv~n~LFgDGAaAvLLs~~ 299 (511)
T PLN02192 274 FGNDRSMLVSNCLFRMGGAAILLSNK 299 (511)
T ss_pred CCCCHHHHhccccccccceEEEEecc
Confidence 0111211 458999999999863
|
|
| >COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.33 E-value=4.7e-06 Score=79.72 Aligned_cols=190 Identities=19% Similarity=0.187 Sum_probs=123.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHH
Q 010896 155 DCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAI 234 (498)
Q Consensus 155 ~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~ 234 (498)
....+.+++.++||+.+++.+ ++++ .|++-++.| ...+.+-.+|..
T Consensus 75 ~a~~l~v~a~r~aL~~~~l~p---edId----~vv~vtsTG---------------------------~~~Ps~dari~~ 120 (356)
T COG3424 75 EAVPLGVDALRRALDGSPLRP---EDID----AVVTVTSTG---------------------------LATPSLDARIVG 120 (356)
T ss_pred HHHHHHHHHHHHHhccCCCCH---HHCc----EEEEEeecc---------------------------ccCCChhHHHHh
Confidence 455788999999999999944 4444 344443322 233445567777
Q ss_pred hhcCCCCcc---ccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCC
Q 010896 235 DTGLMGPNY---SISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKD 311 (498)
Q Consensus 235 ~lgl~Gp~~---tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~ 311 (498)
.|||.-... .-.-||+.+..+|..|.+..+..-...+||..+|.+ ..++. ..|+.
T Consensus 121 ~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~~~vlvV~vELC--SLt~~--------------------~~d~t 178 (356)
T COG3424 121 ELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPDANVLVVCVELC--SLTYV--------------------FADDT 178 (356)
T ss_pred hcCCCCccceeeeecchhhhhhhHHHHHHHHHhhCccceEEEEEeeee--eeeee--------------------cCCCC
Confidence 788863222 234689999999999999999999999999999963 22111 11111
Q ss_pred CCC----ccccceeEEEEEcchHHHHhc---CCcEE----------EEEEeEEEecCCCCC----CCCCCChHHHHHHHH
Q 010896 312 RDG----FVMGEGCGILVMESLEHAMKR---GANII----------AEYLGGAVTCDAHHM----TDPRSDGLGVSSCIA 370 (498)
Q Consensus 312 ~~G----~v~gEGaaavvLe~~~~A~~~---g~~i~----------a~I~g~~~~~dg~~~----~~p~~~~~~~~~~i~ 370 (498)
... -++|||++|+|+.-...+... +..|+ =.+.||.++.+|.+. ..|..-...+...+.
T Consensus 179 ~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~StL~~dse~~Mgwdv~d~G~~~vlSrdlp~lIe~~l~~~V~ 258 (356)
T COG3424 179 KSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFSTLYPDSEDIMGWDVGDQGLKVVLSRDLPNLIESYLAPNVT 258 (356)
T ss_pred cccceeeeeecCCeeEEEEeccccccccCCCCceecccccccCCccccccceeecCCcEEEEEcCchhHHHHHHhhhhHH
Confidence 112 348999999999752222111 11111 125667777666532 223222345567889
Q ss_pred HHHHHcCCCCCCcCEEEccCCCCccCcHHH
Q 010896 371 KSLEDAGVSPEEVNYVNAHATSTLAGDLAE 400 (498)
Q Consensus 371 ~Al~~Agl~~~dId~i~~hgtgt~~~D~~E 400 (498)
..|...|++.+||+.+-+|--|-+.-|+.|
T Consensus 259 ~fL~~~~ls~~dI~~w~~HPGG~KVida~~ 288 (356)
T COG3424 259 TFLATHGLSIEDIEAWVVHPGGPKVIDAYE 288 (356)
T ss_pred HHHHHcCCchhhhceeeeCCCCchHHHHHH
Confidence 999999999999999999987777766554
|
|
| >PLN00415 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.9e-05 Score=81.66 Aligned_cols=184 Identities=11% Similarity=0.136 Sum_probs=106.7
Q ss_pred CCcEEEEeeceecCCC---CCHHHHHHHHHcCCCCcccCCCCCCCCCCc--ccc--cccCC--CCCCCCC--Cccc-ccc
Q 010896 85 KKRIVITGMGLVSVFG---SDIDKFYNKLLEGESGISPIDRFDASSFSV--RFG--GQIRD--FSSKGYI--DGKN-DRR 152 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g---~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~--~~~--g~i~~--~d~~~~i--~~~~-~~~ 152 (498)
.++|+.+-+.|.-|.- .+.+.|.+..+.- ..|+.+.+.. +.. .-+.+ +-|+..+ ++.. .+.
T Consensus 57 ~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~-------~~~~~~s~~F~~~i~~rSGlg~et~~p~~~~~~~~~~~~~~ 129 (466)
T PLN00415 57 SKPVYLVDFSCHQPTDSCKISSETFFNMAKGA-------QLYTEETIQFMTRILNRSGLGDDTYSPRCMLTSPPTPSMYE 129 (466)
T ss_pred CCcEEEEeeeeecCCccccccHHHHHHHHHHc-------CCCCHHHHHHHHHHHHHcCCCCCeeeCCccccCCCCCChhh
Confidence 4579999999999875 4567777766532 1122211100 000 00111 1122111 1111 011
Q ss_pred CCHHHHHHHH-HHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHH
Q 010896 153 LDDCWRYCLV-AGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSAL 231 (498)
Q Consensus 153 ~d~~~~l~l~-aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ 231 (498)
-+....+++. |+.+||+++|++ ++++| +++-++.+ ....+..+..
T Consensus 130 ~~~e~em~i~~A~~~aL~~aGi~---p~dID-----~LIvs~T~--------------------------~~~~Pslaa~ 175 (466)
T PLN00415 130 ARHESELVIFGALNSLFKKTGIE---PREVG-----IFIVNCSL--------------------------FNPNPSLSSM 175 (466)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCC---HHHCC-----EEEEECcC--------------------------CCCCchHHHH
Confidence 2234456655 777888999994 44454 33322211 1123456778
Q ss_pred HHHhhcCCC--Ccccccc-ccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcC
Q 010896 232 LAIDTGLMG--PNYSIST-ACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPW 308 (498)
Q Consensus 232 ia~~lgl~G--p~~tv~~-acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpf 308 (498)
+...+|++. ..+.++. +|++++.+|..|.++++.+....+||.++|.. +...+ ++-
T Consensus 176 l~~~LGLr~~v~~~dL~gmGCsggv~aL~lA~~ll~a~~~~~aLVVs~E~~-S~~~~--------------------~~~ 234 (466)
T PLN00415 176 IVNRYKLKTDVKTYNLSGMGCSAGAISVDLATNLLKANPNTYAVIVSTENM-TLSMY--------------------RGN 234 (466)
T ss_pred HHHHhCCCCCceEEEeccccchHHHHHHHHHHHHHHhCCCCEEEEEEEecc-ccccc--------------------CCC
Confidence 888999972 3566887 99999999999999999999999999999962 11100 000
Q ss_pred CCCC--CCccccceeEEEEEcchH
Q 010896 309 DKDR--DGFVMGEGCGILVMESLE 330 (498)
Q Consensus 309 d~~~--~G~v~gEGaaavvLe~~~ 330 (498)
|... ...++||||+|+||+...
T Consensus 235 dr~~lv~n~LFgDGAAAvlLs~~~ 258 (466)
T PLN00415 235 DRSMLVPNCLFRVGGAAVMLSNRS 258 (466)
T ss_pred cHhHhccceeecccceEEEEecCc
Confidence 1000 125689999999998743
|
|
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=98.19 E-value=1e-05 Score=78.21 Aligned_cols=187 Identities=12% Similarity=0.130 Sum_probs=115.6
Q ss_pred CCcEEEEeeceecCCC---CCHHHHHHHHHcCCCCcccCC-CC-----CCCCCCcccccccCCCCCC-CC-CCccc--cc
Q 010896 85 KKRIVITGMGLVSVFG---SDIDKFYNKLLEGESGISPID-RF-----DASSFSVRFGGQIRDFSSK-GY-IDGKN--DR 151 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g---~~~~~~~~~L~~g~~~i~~~~-~~-----~~~~~~~~~~g~i~~~d~~-~~-i~~~~--~~ 151 (498)
.++|+++.+.|.-|.- .+.+.|++..+.-.. +.+-. +| ..+++. . +.+-|. .+ +++.. ..
T Consensus 6 ~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~-f~~~sl~F~~kIlerSGlG-----~-eTy~P~~~~~~p~~~s~~~ 78 (290)
T PF08392_consen 6 PRPVYLVDFACYKPPDELRVSREEFIEHARRCGR-FDEESLDFQRKILERSGLG-----D-ETYLPPALHEIPPDPSLAA 78 (290)
T ss_pred CCCEEEEeeeecCCCcccccCHHHHHHHHHhccc-CChhHHHHHHHHHHhcCCC-----c-cccCCcccccCCCcccHHH
Confidence 4579999999999876 467888887764321 11100 01 011110 0 011111 11 33321 12
Q ss_pred cCCHHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHH
Q 010896 152 RLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSAL 231 (498)
Q Consensus 152 ~~d~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ 231 (498)
..+....++..++.++|+.+|+.| +++| .+++.++. +...+.+++.
T Consensus 79 a~~Eae~v~f~av~~LL~ktgv~p---~dId----iLVvncs~---------------------------f~ptPSLsam 124 (290)
T PF08392_consen 79 AREEAEMVIFGAVDDLLAKTGVKP---SDID----ILVVNCSL---------------------------FNPTPSLSAM 124 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCH---HHCC----EEEEECcC---------------------------CCcCCcHHHH
Confidence 223455677889999999999944 4444 34444432 1233466788
Q ss_pred HHHhhcCCCCccc--c-ccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcC
Q 010896 232 LAIDTGLMGPNYS--I-STACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPW 308 (498)
Q Consensus 232 ia~~lgl~Gp~~t--v-~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpf 308 (498)
|...+|++.-..+ + .-||++|+.+|.+|.++++.-....+||..+|. +++..+.+-.+...++
T Consensus 125 Ivnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~~~p~~~ALVVstE~-~s~~~Y~G~~rsmlv~------------- 190 (290)
T PF08392_consen 125 IVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQAHPNSYALVVSTEN-ISANWYRGNDRSMLVS------------- 190 (290)
T ss_pred HHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHHhCCCcEEEEEEEee-cccccccCCcHHHhhc-------------
Confidence 8888999875444 3 357999999999999999999989999999997 4443332222222222
Q ss_pred CCCCCCccccceeEEEEEcchHH
Q 010896 309 DKDRDGFVMGEGCGILVMESLEH 331 (498)
Q Consensus 309 d~~~~G~v~gEGaaavvLe~~~~ 331 (498)
..++.+|++|++|.+...
T Consensus 191 -----NcLFr~GgAAvLLSn~~~ 208 (290)
T PF08392_consen 191 -----NCLFRMGGAAVLLSNKPS 208 (290)
T ss_pred -----cccccCCceeEEeecCcc
Confidence 256789999999987554
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.7e-06 Score=68.16 Aligned_cols=63 Identities=24% Similarity=0.345 Sum_probs=46.3
Q ss_pred ccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeEE
Q 010896 244 SISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGI 323 (498)
Q Consensus 244 tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaaa 323 (498)
-|..+|++.+.||+.|..+|++|+++.+|+.+.|...... .+.+ ....+++||||++
T Consensus 2 Di~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~~~----------------------~~~~-~~~~~~~gDgAaA 58 (80)
T PF08545_consen 2 DINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSRIV----------------------DRTD-RQTAFIFGDGAAA 58 (80)
T ss_dssp EEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGGGS----------------------HTTH-HHHHTTB-EEEEE
T ss_pred cccccchHHHHHHHHHHHHHhhccCCEEEEEeeccccccc----------------------cccc-cCcceeecchheE
Confidence 4678999999999999999999999999999999732100 0001 1234679999999
Q ss_pred EEEcch
Q 010896 324 LVMESL 329 (498)
Q Consensus 324 vvLe~~ 329 (498)
+||++.
T Consensus 59 ~vl~~~ 64 (80)
T PF08545_consen 59 VVLSRD 64 (80)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 999975
|
The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. |
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=97.86 E-value=8.9e-05 Score=69.74 Aligned_cols=92 Identities=21% Similarity=0.122 Sum_probs=64.8
Q ss_pred CHHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHH
Q 010896 154 DDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLA 233 (498)
Q Consensus 154 d~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia 233 (498)
.-...|+.+|+.+||+++|++ +++++ -+++-++.| ...+.+-.++.
T Consensus 98 ~~a~~L~~~Aa~~AL~~~g~~---~~dIt----hlv~vs~TG---------------------------~~~PglD~~l~ 143 (226)
T PF00195_consen 98 EEAPPLAEEAARKALAEAGLD---PSDIT----HLVTVSCTG---------------------------IAAPGLDARLI 143 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHTS----GGGEC----EEEEEESSS---------------------------SECS-HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCC---Ccccc----eEEEEecCC---------------------------cCCCchhHHHH
Confidence 345588999999999999994 34443 455554432 23344566788
Q ss_pred HhhcCCCCc---cccccccchHHHHHHHHHHHHHcCCCcEEEEeccccc
Q 010896 234 IDTGLMGPN---YSISTACATANYCFYAAANHIRRGETDIMVAGGTEAA 279 (498)
Q Consensus 234 ~~lgl~Gp~---~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~ 279 (498)
..|||+.-. ....-||++|..+|..|.+..++..-..|||..+|.+
T Consensus 144 ~~LgL~~~v~R~~i~~~GC~gg~~~L~~A~~~~~~~p~a~VLvv~vElc 192 (226)
T PF00195_consen 144 NRLGLRPDVQRTPIFGMGCAGGAAGLRRAKDIARANPGARVLVVCVELC 192 (226)
T ss_dssp HHHT--TTSEEEEEES-GGGHHHHHHHHHHHHHHHSTT-EEEEEEEEEG
T ss_pred hcCCCCCCcEEEEEeccchhhHHHHHHHHHHHHhCCccceEEEEEEEee
Confidence 889997533 2356799999999999999999999999999999963
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00089 Score=64.66 Aligned_cols=173 Identities=20% Similarity=0.220 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
..+|..+|+..||+.+++ ..++++ ++++-. +.+. .+.++..+..
T Consensus 51 E~~m~~~A~~~al~Ka~l---~~~dId-----~~~aGD--------------------------LlnQ--~i~s~f~ar~ 94 (329)
T PF07451_consen 51 ESKMQKEAVELALKKAGL---KKEDID-----YLFAGD--------------------------LLNQ--IISSSFAARD 94 (329)
T ss_dssp HHHHHHHHHHHHHHHTT-----GGG-S-----EEEEEE--------------------------TTCC--CCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCC---CHHHCe-----EEEehh--------------------------hhhh--hHHHHHHHHh
Confidence 458899999999999999 444444 555431 1111 1334455556
Q ss_pred hcCCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCc
Q 010896 236 TGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGF 315 (498)
Q Consensus 236 lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~ 315 (498)
|++ |-+-+-.||++...+|.+|..+|..|-+|.+|++.....-+.+....|-. . -+.-||-.. -
T Consensus 95 l~i--Pf~GlygACST~~e~l~laa~~vdgg~a~~vla~tSSH~~tAERQfR~P~----E------yG~Qrp~tA----q 158 (329)
T PF07451_consen 95 LGI--PFLGLYGACSTMMESLALAAMLVDGGFADYVLAATSSHFATAERQFRFPT----E------YGGQRPPTA----Q 158 (329)
T ss_dssp HT----EEEB--CCCHHHHHHHHHHHHHHTTS-SEEEEEEEE-CCHHHHHT---G----G------GT----TT------
T ss_pred cCC--CccchhhHHHHHHHHHHHHHHHHhCCCcceEEEEeccccchhhhhccCch----h------ccCCCCCcc----c
Confidence 666 78888999999999999999999999999999998876444433222211 0 022244322 2
Q ss_pred cccceeEEEEEcchHHHHhcCCcEEEEEEeEE--EecCCCCCCCCCCChH----HHHHHHHHHHHHcCCCCCCcCEEEcc
Q 010896 316 VMGEGCGILVMESLEHAMKRGANIIAEYLGGA--VTCDAHHMTDPRSDGL----GVSSCIAKSLEDAGVSPEEVNYVNAH 389 (498)
Q Consensus 316 v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~--~~~dg~~~~~p~~~~~----~~~~~i~~Al~~Agl~~~dId~i~~h 389 (498)
..--|+|++||.+.. ..|+ |.+.- -.-| ..+..|.-.|. +....|.+-|++.|.+|+|.|.|..-
T Consensus 159 wTVTGaGa~il~~~~------~~p~--It~~T~GkVvD-~G~~D~~nMGaAMAPAA~dTI~~h~~D~g~~p~dYDlIvTG 229 (329)
T PF07451_consen 159 WTVTGAGAAILSKEG------SGPR--ITHATIGKVVD-MGIKDPNNMGAAMAPAAADTIEQHFKDTGRSPDDYDLIVTG 229 (329)
T ss_dssp EE--EEEEEEEESS--------SEE--EEEEE----B--SS---TT-HHHHHHHHHHHHHHHHHHHCT--GGG-SEEEES
T ss_pred EEEeceEEEEEecCC------CCcE--EEEEEEEEEEE-cCCCCcccchhhHhHHHHHHHHHHHHHhCCChhhcCeEEec
Confidence 234588999998533 2333 33321 1112 12334444443 44567999999999999999999765
|
This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A. |
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=97.38 E-value=3e-05 Score=80.69 Aligned_cols=77 Identities=14% Similarity=0.088 Sum_probs=68.7
Q ss_pred ccCccCCcccccCchhhHhhhhCCCCcccccccccCcccccccccccccCCCCcccccccCCCCCCCCCCCCCCCCcEEE
Q 010896 11 LGVVFGNKQVKSNGAASLAQYSGLRPAENFQFASAGITTTIKQSGLICSSGPKCRTIRVMASPTASAPKREKDPKKRIVI 90 (498)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~I 90 (498)
-|+||++||||+||++.+.+++|||..+.+.|+.++..++...+++.+.. +++++.++++.+..+.....+.++|
T Consensus 777 sge~Vde~dv~~rY~d~Vl~r~GIR~~~de~~~g~~d~~~~~l~eV~ld~-----Dl~f~v~S~e~A~~fv~~~~e~t~i 851 (866)
T COG4982 777 SGEPVDEKDVKARYHDEVLERCGIREIVDELFAGYNDEKKPLLQEVFLDK-----DLEFFVASKEEARAFVDFDPEHTVI 851 (866)
T ss_pred CCCcCCHHHHHHHHHHHHHHhcCceeecccccccCCCccchhhhhhhhcc-----ccccccccHHHHHHHHhcCcCeeeE
Confidence 48999999999999999999999999999999999999999999988887 8888888888888777777777777
Q ss_pred Ee
Q 010896 91 TG 92 (498)
Q Consensus 91 tG 92 (498)
.-
T Consensus 852 ~~ 853 (866)
T COG4982 852 FE 853 (866)
T ss_pred Ee
Confidence 54
|
|
| >PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0085 Score=53.81 Aligned_cols=138 Identities=17% Similarity=0.230 Sum_probs=82.1
Q ss_pred CcEEEEeeceecCCC-CCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHH
Q 010896 86 KRIVITGMGLVSVFG-SDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAG 164 (498)
Q Consensus 86 ~~V~ItG~g~~~p~g-~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa 164 (498)
++|-|.+|+..+|.- .+.+++-+. .|. +...|.... |+-. ..+.++.| | ..-|++.|+
T Consensus 3 ~~VGI~~i~~y~p~~~v~~~~La~~--~g~---------d~~K~~~gl-gq~~----~av~~~~E----D-~vTmA~nAa 61 (174)
T PF01154_consen 3 QNVGIDAIEFYIPRYYVDQEELAEA--RGV---------DPGKYTIGL-GQEK----MAVPPPDE----D-IVTMAANAA 61 (174)
T ss_dssp SSEEEEEEEEE-ESEEEEHHHHHHH--TTS----------TCHHHTTT---SE----EEE--TTS------HHHHHHHHH
T ss_pred ccccEeEEEEecCceEecHHHHHHH--hCC---------CHHHhhhhc-CeeE----EEeCCCcc----c-HHHHHHHHH
Confidence 579999999999976 567765432 121 111110000 1000 00011111 2 336999999
Q ss_pred HHHHHHCCCCcccccccCCceeE-EEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCCCc-
Q 010896 165 RRALEEASLSPQVLENMDRTRIG-VVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPN- 242 (498)
Q Consensus 165 ~~AL~dAG~~~~~~~~~~~~~~g-v~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~Gp~- 242 (498)
+.+|++.++ +++ ++| +++||-. +.+ ..-..+.+|..+|++.|..
T Consensus 62 ~~ll~~~~i---d~~-----~Ig~l~vgTES-~vD-------------------------~sKs~~t~v~~ll~~s~~~~ 107 (174)
T PF01154_consen 62 KPLLDRYNI---DPD-----DIGRLIVGTES-GVD-------------------------KSKSISTYVHQLLGLSGNPD 107 (174)
T ss_dssp HTTHHHHT----HHH-----HEEEEEEE-SS--SB-------------------------SSS-HHHHHHHHTTTTT-SS
T ss_pred HHHHHHcCC---CHH-----HccEEEEeccc-ccc-------------------------ccccHHHHHHHHhCcCCCCc
Confidence 999999877 333 445 5667632 111 0112566788889986632
Q ss_pred ---cccccccchHHHHHHHHHHHHHcCCCc--EEEEecccc
Q 010896 243 ---YSISTACATANYCFYAAANHIRRGETD--IMVAGGTEA 278 (498)
Q Consensus 243 ---~tv~~acaS~l~Al~~A~~~I~~G~~d--~alvgg~d~ 278 (498)
+-+-.+|-++..||..|+.+|+++..| .+||.+.|.
T Consensus 108 ~~~~e~k~ACygGTaAL~~a~~~v~s~~~~g~~aLVVasDi 148 (174)
T PF01154_consen 108 CRGVEMKQACYGGTAALQNAVNWVASSPWDGRKALVVASDI 148 (174)
T ss_dssp SEEEEEESGGGHHHHHHHHHHHHHCSTTSTTEEEEEEEEEE
T ss_pred eeeeehhhhhHHHHHHHHHHHHHHhcCCCCCCeEEEEeccc
Confidence 346799999999999999999998754 899999996
|
Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A .... |
| >PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.0089 Score=47.91 Aligned_cols=89 Identities=21% Similarity=0.284 Sum_probs=54.4
Q ss_pred HHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCC
Q 010896 373 LEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLN 452 (498)
Q Consensus 373 l~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~ 452 (498)
|+++|++++|||++..|-.+... .+.+.+.++-... .+...-..+||+.+|+-.+.|.. .++.|.+.
T Consensus 1 L~~~g~~~~did~~i~hq~~~~~-----~~~~~~~lgi~~~-~~~~~~~~~Gn~~sa~~~~~L~~---~~~~g~~~---- 67 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQASKKI-----LDSIAKRLGIPPE-RFPDNLAEYGNTGSASIPINLAD---ALEEGRIK---- 67 (90)
T ss_dssp HHHTT--GGGESEEEE-SSSHHH-----HHHHHHHHTS-GG-GBE-THHHH-B-GGGHHHHHHHH---HHHTTSSC----
T ss_pred CccccCCHHHCCEEEeCCCCHHH-----HHHHHHHcCCcHH-HHHHHHhccCcchhhhHHHHHHH---HHHcCCCC----
Confidence 68999999999999999665443 2234455543111 12223377899999987766655 34444321
Q ss_pred CCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEe
Q 010896 453 QDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494 (498)
Q Consensus 453 ~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~ 494 (498)
+-+.+++-++|.|.+.++++++
T Consensus 68 --------------------~Gd~vl~~~~G~G~~~~~~~~~ 89 (90)
T PF08541_consen 68 --------------------PGDRVLLVGFGAGFSWGAAVLR 89 (90)
T ss_dssp --------------------TTEEEEEEEEETTTEEEEEEEE
T ss_pred --------------------CCCEEEEEEEEhhheeEEEEEE
Confidence 2356778899999998888875
|
3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B .... |
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=83.15 E-value=5.1 Score=41.93 Aligned_cols=101 Identities=13% Similarity=-0.003 Sum_probs=57.4
Q ss_pred EEEEeEEEecCCCCCCCCC--CChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcH-HHHHHHHHHhcCCCccccc
Q 010896 341 AEYLGGAVTCDAHHMTDPR--SDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDL-AEVNAIKKVFKDTSEMKMN 417 (498)
Q Consensus 341 a~I~g~~~~~dg~~~~~p~--~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~-~E~~al~~~f~~~~~~~v~ 417 (498)
..|.|.+.+.-+.+...+. ....-..+++++||+++||+++|||.|... +.+..++. .....+....+-....+..
T Consensus 5 v~Ivg~~rTp~g~~~g~~~~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g-~~~~~~~~~~~a~~v~~~lGl~~~~p~~ 83 (426)
T PRK08170 5 VYIVDGARTPFLKARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILG-CAMPSPDEANIARVVALRLGCGEKVPAW 83 (426)
T ss_pred EEEEecCCCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-eccCCCCcChHHHHHHHHhCcCCCceee
Confidence 3466766655444322211 123344679999999999999999987643 22222231 1122233333321122222
Q ss_pred ccccccCCcchhhhHHHHHHHHHHhhcCcc
Q 010896 418 GTKSMIGHGLGAAGGLEAITTIKAITTGWL 447 (498)
Q Consensus 418 s~K~~~Gh~~~AaG~~~li~a~~~L~~g~i 447 (498)
.+. ..+++|+..+..+...++.|..
T Consensus 84 ~v~-----~~CaSg~~al~~A~~~I~sG~~ 108 (426)
T PRK08170 84 TVQ-----RNCASGMQALDSAAANIALGRA 108 (426)
T ss_pred ecc-----chhhHHHHHHHHHHHHHHCCCC
Confidence 221 2388999999999999988753
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=80.09 E-value=7.8 Score=40.11 Aligned_cols=98 Identities=13% Similarity=0.159 Sum_probs=57.0
Q ss_pred EEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHH-HHHHHHHHhcCCCccccccc
Q 010896 341 AEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLA-EVNAIKKVFKDTSEMKMNGT 419 (498)
Q Consensus 341 a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~-E~~al~~~f~~~~~~~v~s~ 419 (498)
+.|.|++...-+++... ....-..+++++||+++||+++|||.+.+..+........ -...+....+.. ..+...
T Consensus 11 vaIvG~g~t~~~~~~~~--~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~-~~~~~~- 86 (392)
T PRK06065 11 VAVIGAGLTLFRRRLLE--TPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI-RKPVSR- 86 (392)
T ss_pred eEEEEecccCCcCCCCC--CHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC-CCCeEE-
Confidence 34788887665543221 1123346799999999999999999987632211111111 111233333321 122211
Q ss_pred ccccCCcchhhhHHHHHHHHHHhhcCc
Q 010896 420 KSMIGHGLGAAGGLEAITTIKAITTGW 446 (498)
Q Consensus 420 K~~~Gh~~~AaG~~~li~a~~~L~~g~ 446 (498)
+ +..+++|...+..+...++.|.
T Consensus 87 ---V-~~~gasG~~al~~A~~~I~sG~ 109 (392)
T PRK06065 87 ---V-YVGGATGVMTAIAGWYHVASGL 109 (392)
T ss_pred ---E-ecCchhHHHHHHHHHHHHhCCC
Confidence 1 3357889889999999998885
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 498 | ||||
| 1j3n_A | 408 | Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protei | 1e-104 | ||
| 1e5m_A | 416 | Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kas | 2e-96 | ||
| 2gqd_A | 437 | The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii | 5e-90 | ||
| 2gfw_A | 427 | Structure Of Wild Type E. Coli Fabf (Kasii) Length | 3e-83 | ||
| 1b3n_A | 412 | Beta-Ketoacyl Carrier Protein Synthase As A Drug Ta | 4e-83 | ||
| 2gfy_A | 427 | Structure Of E. Coli Fabf(K335a) Mutant With Covale | 1e-82 | ||
| 3hnz_A | 427 | Structure Of E. Coli Fabf(C163a) In Complex With Pl | 4e-82 | ||
| 2gfv_A | 427 | Structure Of E. Coli Fabf (Kasii) C163q Mutant Leng | 7e-82 | ||
| 1ox0_A | 430 | The Crystal Structure Of Beta-Ketoacyl-[acyl Carrie | 9e-80 | ||
| 2alm_A | 431 | Crystal Structure Analysis Of A Mutant Beta-Ketoacy | 2e-78 | ||
| 2rjt_A | 428 | Crystal Structure Analysis Of A Surface Entropy Red | 1e-77 | ||
| 3kzu_A | 428 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 1e-76 | ||
| 3o04_A | 413 | Crystal Structure Of The Beta-Keto-Acyl Carrier Pro | 2e-76 | ||
| 3e60_A | 424 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 5e-71 | ||
| 2iwy_A | 438 | Human Mitochondrial Beta-ketoacyl Acp Synthase Leng | 1e-69 | ||
| 4ddo_A | 451 | Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei | 8e-69 | ||
| 2c9h_A | 444 | Structure Of Mitochondrial Beta-Ketoacyl Synthase L | 2e-68 | ||
| 4f32_A | 451 | Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei | 2e-67 | ||
| 1w0i_A | 431 | Arabidopsis Thaliana Mitochondrial Kas Length = 431 | 8e-66 | ||
| 2wgd_A | 416 | Crystal Structure Of Kasa Of Mycobacterium Tubercul | 6e-60 | ||
| 2wgf_A | 416 | Crystal Structure Of Mycobacterium Tuberculosis C17 | 1e-58 | ||
| 2gp6_A | 434 | X-Ray Crystal Structure Of Mycobacterium Tuberculos | 8e-56 | ||
| 1dd8_A | 406 | Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Pr | 1e-55 | ||
| 1fj4_A | 406 | The Structure Of Beta-Ketoacyl-[acyl Carrier Protei | 3e-55 | ||
| 2byw_A | 418 | Structure Of Escherichia Coli Beta-Ketoacyl (Acyl C | 4e-55 | ||
| 1h4f_A | 406 | E. Coli Beta-Ketoacyl [acyl Carrier Protein] Syntha | 6e-55 | ||
| 2byz_A | 418 | Structure Of E. Coli Kas I H298q Mutant In Complex | 2e-54 | ||
| 2byy_A | 418 | E. Coli Kas I H298e Mutation Length = 418 | 3e-54 | ||
| 3u0f_A | 411 | The Structure Of Beta-Ketoacyl Synthase From Brucel | 4e-52 | ||
| 3lrf_A | 428 | Crystal Structure Of Beta-Ketoacyl Synthase From Br | 4e-52 | ||
| 1ek4_A | 418 | Beta-Ketoacyl [acyl Carrier Protein] Synthase I In | 9e-51 | ||
| 1f91_A | 406 | Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In | 9e-51 | ||
| 2vb7_C | 406 | Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Ap | 3e-50 | ||
| 1tqy_A | 424 | The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le | 1e-46 | ||
| 3oyt_A | 410 | 1.84 Angstrom Resolution Crystal Structure Of 3-Oxo | 1e-44 | ||
| 4ewg_A | 412 | Crystal Structure Of A Beta-Ketoacyl Synthase From | 2e-42 | ||
| 1tqy_B | 415 | The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le | 3e-34 | ||
| 2hg4_A | 917 | Structure Of The Ketosynthase-acyltransferase Didom | 9e-20 | ||
| 2qo3_A | 915 | Crystal Structure Of [ks3][at3] Didomain From Modul | 6e-17 | ||
| 2vz8_A | 2512 | Crystal Structure Of Mammalian Fatty Acid Synthase | 4e-14 | ||
| 3hhd_A | 965 | Structure Of The Human Fatty Acid Synthase Ks-Mat D | 4e-14 | ||
| 3zen_D | 3089 | Cryo-em Structure Of The Mycobacterial Fatty Acid S | 7e-09 | ||
| 2uv9_A | 1878 | Crystal Structure Of Fatty Acid Synthase From Therm | 1e-04 |
| >pdb|1J3N|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protein) Synthase Ii From Thermus Thermophilus Hb8 Length = 408 | Back alignment and structure |
|
| >pdb|1E5M|A Chain A, Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kasii) From Synechocystis Sp Length = 416 | Back alignment and structure |
|
| >pdb|2GQD|A Chain A, The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii (Fabf) From Staphylococcus Aureus Length = 437 | Back alignment and structure |
|
| >pdb|2GFW|A Chain A, Structure Of Wild Type E. Coli Fabf (Kasii) Length = 427 | Back alignment and structure |
|
| >pdb|1B3N|A Chain A, Beta-Ketoacyl Carrier Protein Synthase As A Drug Target, Implications From The Crystal Structure Of A Complex With The Inhibitor Cerulenin. Length = 412 | Back alignment and structure |
|
| >pdb|2GFY|A Chain A, Structure Of E. Coli Fabf(K335a) Mutant With Covalently Linked Dodecanoic Acid Length = 427 | Back alignment and structure |
|
| >pdb|3HNZ|A Chain A, Structure Of E. Coli Fabf(C163a) In Complex With Platensimycin Length = 427 | Back alignment and structure |
|
| >pdb|2GFV|A Chain A, Structure Of E. Coli Fabf (Kasii) C163q Mutant Length = 427 | Back alignment and structure |
|
| >pdb|1OX0|A Chain A, The Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 430 | Back alignment and structure |
|
| >pdb|2ALM|A Chain A, Crystal Structure Analysis Of A Mutant Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 431 | Back alignment and structure |
|
| >pdb|2RJT|A Chain A, Crystal Structure Analysis Of A Surface Entropy Reduction Mutant Of S. Pneumoniae Fabf Length = 428 | Back alignment and structure |
|
| >pdb|3KZU|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Brucella Melitensis Length = 428 | Back alignment and structure |
|
| >pdb|3O04|A Chain A, Crystal Structure Of The Beta-Keto-Acyl Carrier Protein Synthase Ii (Lmo2201) From Listeria Monocytogenes Length = 413 | Back alignment and structure |
|
| >pdb|3E60|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Bartonella Henselae Length = 424 | Back alignment and structure |
|
| >pdb|2IWY|A Chain A, Human Mitochondrial Beta-ketoacyl Acp Synthase Length = 438 | Back alignment and structure |
|
| >pdb|4DDO|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis Length = 451 | Back alignment and structure |
|
| >pdb|2C9H|A Chain A, Structure Of Mitochondrial Beta-Ketoacyl Synthase Length = 444 | Back alignment and structure |
|
| >pdb|4F32|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis In Complex With Platencin Length = 451 | Back alignment and structure |
|
| >pdb|1W0I|A Chain A, Arabidopsis Thaliana Mitochondrial Kas Length = 431 | Back alignment and structure |
|
| >pdb|2WGD|A Chain A, Crystal Structure Of Kasa Of Mycobacterium Tuberculosis Length = 416 | Back alignment and structure |
|
| >pdb|2WGF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa Variant Length = 416 | Back alignment and structure |
|
| >pdb|2GP6|A Chain A, X-Ray Crystal Structure Of Mycobacterium Tuberculosis Beta- Ketoacyl Acyl Carrier Protein Synthase Ii (Mtkasb) Length = 434 | Back alignment and structure |
|
| >pdb|1DD8|A Chain A, Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I From Escherichia Coli Length = 406 | Back alignment and structure |
|
| >pdb|1FJ4|A Chain A, The Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I In Complex With Thiolactomycin, Implications For Drug Design Length = 406 | Back alignment and structure |
|
| >pdb|2BYW|A Chain A, Structure Of Escherichia Coli Beta-Ketoacyl (Acyl Carrier Protein) Synthase I Lys328ala Mutant Length = 418 | Back alignment and structure |
|
| >pdb|1H4F|A Chain A, E. Coli Beta-Ketoacyl [acyl Carrier Protein] Synthase I K328r Length = 406 | Back alignment and structure |
|
| >pdb|2BYZ|A Chain A, Structure Of E. Coli Kas I H298q Mutant In Complex With C12 Fatty Acid Length = 418 | Back alignment and structure |
|
| >pdb|2BYY|A Chain A, E. Coli Kas I H298e Mutation Length = 418 | Back alignment and structure |
|
| >pdb|3U0F|A Chain A, The Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Bound To The Fragment 7-Hydroxycoumarin Length = 411 | Back alignment and structure |
|
| >pdb|3LRF|A Chain A, Crystal Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Length = 428 | Back alignment and structure |
|
| >pdb|1EK4|A Chain A, Beta-Ketoacyl [acyl Carrier Protein] Synthase I In Complex With Dodecanoic Acid To 1.85 Resolution Length = 418 | Back alignment and structure |
|
| >pdb|1F91|A Chain A, Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In Complex With C10 Fatty Acid Substrate Length = 406 | Back alignment and structure |
|
| >pdb|2VB7|C Chain C, Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo Structure After Soak In Peg Solution Length = 406 | Back alignment and structure |
|
| >pdb|1TQY|A Chain A, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 424 | Back alignment and structure |
|
| >pdb|3OYT|A Chain A, 1.84 Angstrom Resolution Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase I (Fabb) From Yersinia Pestis Co92 Length = 410 | Back alignment and structure |
|
| >pdb|4EWG|A Chain A, Crystal Structure Of A Beta-Ketoacyl Synthase From Burkholderia Phymatum Stm815 Length = 412 | Back alignment and structure |
|
| >pdb|1TQY|B Chain B, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 415 | Back alignment and structure |
|
| >pdb|2HG4|A Chain A, Structure Of The Ketosynthase-acyltransferase Didomain Of Module 5 From Debs. Length = 917 | Back alignment and structure |
|
| >pdb|2QO3|A Chain A, Crystal Structure Of [ks3][at3] Didomain From Module 3 Of 6- Deoxyerthronolide B Synthase Length = 915 | Back alignment and structure |
|
| >pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase Length = 2512 | Back alignment and structure |
|
| >pdb|3HHD|A Chain A, Structure Of The Human Fatty Acid Synthase Ks-Mat Didomain As A Framework For Inhibitor Design. Length = 965 | Back alignment and structure |
|
| >pdb|3ZEN|D Chain D, Cryo-em Structure Of The Mycobacterial Fatty Acid Synthase Length = 3089 | Back alignment and structure |
|
| >pdb|2UV9|A Chain A, Crystal Structure Of Fatty Acid Synthase From Thermomyces Lanuginosus At 3.1 Angstrom Resolution. This File Contains The Alpha Subunits Of The Fatty Acid Synthase. The Entire Crystal Structure Consists Of One Heterododecameric Fatty Acid Synthase And Is Described In Remark 400 Length = 1878 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A Length = 430 | Back alignment and structure |
|---|
Score = 574 bits (1483), Expect = 0.0
Identities = 176/421 (41%), Positives = 247/421 (58%), Gaps = 6/421 (1%)
Query: 73 PTASAPKREKDPKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRF 132
+ P+ R+V+TG G+ S G+ ++F+N L G+ GI I +FD S F V
Sbjct: 10 SSGLVPRGSHMKLNRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFDHSDFDVHN 69
Query: 133 GGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGS 192
+I+DF Y K+ R D+ Y L A + A+ A+L +E ++R R GV+V S
Sbjct: 70 AAEIQDFPFDKYFVKKDTNRFDNYSLYALYAAQEAVNHANL---DVEALNRDRFGVIVAS 126
Query: 193 GMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATA 252
G+GG+ V L +KG K++ P +P ++ NM S +A+ G G SI+TAC+++
Sbjct: 127 GIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSS 186
Query: 253 NYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDR 312
N A I+ G D+M+ GGTEA+I P + GF A ALS + P RAS P+DKDR
Sbjct: 187 NDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALSTTED-PTRASIPFDKDR 245
Query: 313 DGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKS 372
+GFVMGEG G+LV+ESLEHA KRGA I+AE +G TCDA+HMT P +G G I +
Sbjct: 246 NGFVMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLA 305
Query: 373 LEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGG 432
LE+A +SPE+V YVNAH TST A + E AI V E+ ++ TKS GH LGAAG
Sbjct: 306 LEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGK--EVPVSSTKSFTGHLLGAAGA 363
Query: 433 LEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVV 492
+EAI TI+A+ ++ T + + + V + + AISN+FGFGGHN+V+
Sbjct: 364 VEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVYGQGLEKEIPYAISNTFGFGGHNAVLA 423
Query: 493 F 493
F
Sbjct: 424 F 424
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 Length = 416 | Back alignment and structure |
|---|
Score = 573 bits (1479), Expect = 0.0
Identities = 184/410 (44%), Positives = 261/410 (63%), Gaps = 4/410 (0%)
Query: 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGY 144
KKR+V+TG+G ++ G+ + ++ L+EG +GI PI RFDAS + RFGG+++DF + +
Sbjct: 6 KKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQF 65
Query: 145 IDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGV 204
+D K +R+D + + A ++A+ +A L V+ ++ IGV++G+G+GGL
Sbjct: 66 LDRKEAKRMDRFCHFAVCASQQAINDAKL---VINELNADEIGVLIGTGIGGLKVLEDQQ 122
Query: 205 EALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIR 264
L+ KG + +PF IP I NM S L AI+ G GPN TACA + A ++
Sbjct: 123 TILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQ 182
Query: 265 RGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324
G M+ GGTEAAI P GF + RALS RN+ P ASRP+DKDRDGFVMGEG GIL
Sbjct: 183 NGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGSGIL 242
Query: 325 VMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVN 384
++E LE A+ RGA I E +G A+TCDA+H+T P DG G + IA +L+D+G+ PE V+
Sbjct: 243 ILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVS 302
Query: 385 YVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAIT 443
Y+NAH TST A D+ E AIK+ + + ++ TKSM GH LG +GG+EA+ T+ AI
Sbjct: 303 YINAHGTSTPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIA 362
Query: 444 TGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 493
+ PT+N +N +PE +D VP + V+VA+SNSFGFGGHN + F
Sbjct: 363 EDKVPPTINLENPDPECDLDYVPGQSRALIVDVALSNSFGFGGHNVTLAF 412
|
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A Length = 427 | Back alignment and structure |
|---|
Score = 566 bits (1462), Expect = 0.0
Identities = 183/411 (44%), Positives = 266/411 (64%), Gaps = 5/411 (1%)
Query: 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGY 144
K+R+V+TG+G++S G+ ++ + LL G+SGIS ID FD S+++ +F G ++DF+ +
Sbjct: 17 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDI 76
Query: 145 IDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGV 204
I K R++D +Y +VAG +A++++ L + + TRIG +GSG+GGL
Sbjct: 77 ISRKEQRKMDAFIQYGIVAGVQAMQDSGL---EITEENATRIGAAIGSGIGGLGLIEENH 133
Query: 205 EALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIR 264
+L+ G +KI+PFF+P +I NM + L I GL GP+ SI+TA + + AA I
Sbjct: 134 TSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAATSGVHNIGHAARIIA 193
Query: 265 RGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324
G+ D+MVAGG E A P GVGGF A RALS RN+ P+ ASRPWDK+RDGFV+G+G G+L
Sbjct: 194 YGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGML 253
Query: 325 VMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVN 384
V+E EHA KRGA I AE +G ++ DA+HMT P +G G + +A +L DAG+ ++
Sbjct: 254 VLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIG 313
Query: 385 YVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAIT 443
YVNAH TST AGD AE A+K +F + S + ++ TKSM GH LGAAG +E+I +I A+
Sbjct: 314 YVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALR 373
Query: 444 TGWLHPTLNQDNLEPEVTIDTVPNVKKQHH-VNVAISNSFGFGGHNSVVVF 493
+ PT+N DN + +D VP+ +Q + + NSFGFGG N ++F
Sbjct: 374 DQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIF 424
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} Length = 437 | Back alignment and structure |
|---|
Score = 567 bits (1463), Expect = 0.0
Identities = 180/410 (43%), Positives = 257/410 (62%), Gaps = 5/410 (1%)
Query: 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGY 144
KR+VITGMG +S G+D+ + L+G +GI I R D +SV G++++F+ + +
Sbjct: 27 NKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDH 86
Query: 145 IDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGV 204
ID K RR+D +Y +VA R A+++A L + RIGV +GSG+GG+ +F
Sbjct: 87 IDKKEARRMDRFTQYAIVAAREAVKDAQL---DINENTADRIGVWIGSGIGGMETFEIAH 143
Query: 205 EALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIR 264
+ L+ KG ++++PFF+P I +M + ++ID G GPN + TACAT A ++
Sbjct: 144 KQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQ 203
Query: 265 RGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324
RG+ D M+ GGTEA I + GF A RALS N+ + A RP+ + RDGFVMGEG GIL
Sbjct: 204 RGDADAMITGGTEAPITHMAIAGFSASRALS-TNDDIETACRPFQEGRDGFVMGEGAGIL 262
Query: 325 VMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVN 384
V+ESLE A RGANI AE +G T DA+H+T P +G G S + +++DAG+ P++V
Sbjct: 263 VIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQ 322
Query: 385 YVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAIT 443
Y+NAH TST GDL EV AIK F + +K++ TKSM GH LGA GG+EAI + +I
Sbjct: 323 YLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIK 382
Query: 444 TGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 493
+ PT++ +PE +D VPN + + A+SNS GFGGHN+V+VF
Sbjct: 383 DSKVAPTIHAVTPDPECDLDIVPNEAQDLDITYAMSNSLGFGGHNAVLVF 432
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} Length = 413 | Back alignment and structure |
|---|
Score = 565 bits (1460), Expect = 0.0
Identities = 164/410 (40%), Positives = 258/410 (62%), Gaps = 5/410 (1%)
Query: 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGY 144
K+R+V+TG+G V+ G+D + + +G +G++ + R + F V+ +++DF + Y
Sbjct: 3 KRRVVVTGIGAVTPIGNDAETSWENAKKGVNGVAKMTRLNPDDFPVKIAAELKDFDVEKY 62
Query: 145 IDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGV 204
++ K R++D Y + + A++++ L V+++ + R+GV +GSG+GG+ +F T
Sbjct: 63 LEKKEARKMDRFTHYAIASAEMAVQDSGL---VIDDSNANRVGVWIGSGIGGMETFETQY 119
Query: 205 EALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIR 264
E + +G+++++PFF+P I +MGS ++I G G N + TACATA A I
Sbjct: 120 EIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKGINSTTVTACATATNSIGDAFKVIE 179
Query: 265 RGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324
RG+ D M+ GG EA I + GF A +ALS N P+ A RP+DKDRDGF++GEG GI+
Sbjct: 180 RGDADAMITGGAEAPITKMSLAGFTANKALS-LNPDPETACRPFDKDRDGFIIGEGAGIV 238
Query: 325 VMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVN 384
++E EHA RGA I AE +G T DA+H+T P +G G + + +++DAG++P++V+
Sbjct: 239 ILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDKVD 298
Query: 385 YVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAIT 443
Y+NAH TST D E AIK VF + ++ ++ TKSM GH LGA+GG+EAI + I
Sbjct: 299 YINAHGTSTPYNDEYETQAIKTVFGEHAKKLAISSTKSMTGHTLGASGGIEAIFALLTIR 358
Query: 444 TGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 493
+ PT++ N + +D VPN ++ +VNV ISNSFGFGGHN+ +VF
Sbjct: 359 DNIIAPTIHLKNQDEVCDLDYVPNEAREANVNVVISNSFGFGGHNATLVF 408
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* Length = 416 | Back alignment and structure |
|---|
Score = 565 bits (1459), Expect = 0.0
Identities = 140/426 (32%), Positives = 224/426 (52%), Gaps = 15/426 (3%)
Query: 70 MASPTASAPKREKDPKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSF- 128
M+ P+ + +V+T + + DI+ + LL GESGI ++ + +
Sbjct: 1 MSQPSTANGGF-----PSVVVTAVTATTSISPDIESTWKGLLAGESGIHALEDEFVTKWD 55
Query: 129 -SVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIG 187
+V+ GG ++D ++ + RR+ R + G + E A +D R
Sbjct: 56 LAVKIGGHLKDPVDS-HMGRLDMRRMSYVQRMGKLLGGQLWESAGS-----PEVDPDRFA 109
Query: 188 VVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSIST 247
VVVG+G+GG + + G +K++P + + N +A++ + G + +
Sbjct: 110 VVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGARAGVMTPVS 169
Query: 248 ACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRP 307
AC++ + A I G+ D+ V GG E I + F RA+S RN+ P+RASRP
Sbjct: 170 ACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRP 229
Query: 308 WDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSS 367
+DKDRDGFV GE ++++E+ EHA RGA +A LG +T DA HM P +DG+
Sbjct: 230 FDKDRDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGR 289
Query: 368 CIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGL 427
+ +SLE AG+SP ++++VNAH T+T GD AE NAI+ D + + KS +GH +
Sbjct: 290 AMTRSLELAGLSPADIDHVNAHGTATPIGDAAEANAIRVAGCD--QAAVYAPKSALGHSI 347
Query: 428 GAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGH 487
GA G LE++ T+ + G + PTLN + +PE+ +D V + A++NSFGFGGH
Sbjct: 348 GAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDLDVVAGEPRYGDYRYAVNNSFGFGGH 407
Query: 488 NSVVVF 493
N + F
Sbjct: 408 NVALAF 413
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 408 | Back alignment and structure |
|---|
Score = 562 bits (1451), Expect = 0.0
Identities = 191/409 (46%), Positives = 275/409 (67%), Gaps = 6/409 (1%)
Query: 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYI 145
+R+V+TG+G ++ G + F+ L G+SG+ PI RFDAS+ VR ++ D Y+
Sbjct: 2 RRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEV-DVDPGAYL 60
Query: 146 DGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVE 205
D K RRLD +Y L+A + ALE+A L E++D R+G +VG+G+GG+ ++
Sbjct: 61 DRKELRRLDRFVQYALIAAQLALEDAGL---KPEDLDPERVGTLVGTGIGGMETWEAQSR 117
Query: 206 ALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRR 265
+++G +I+PFFIP I NM SA +A+ G GP+ ++ TACAT +A I+
Sbjct: 118 VFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGADALGSALRMIQL 177
Query: 266 GETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILV 325
GE D+++AGGTEAAI P +G F RALS RNE P++ASRP+ RDGFVMGEG G+LV
Sbjct: 178 GEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRDGFVMGEGAGVLV 237
Query: 326 MESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNY 385
+E+ EHA KRGA I AE +G + DAHH+T+P +G G + +A++L+DAG++PE+V Y
Sbjct: 238 LEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGY 297
Query: 386 VNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITT 444
+NAH TST GD AEV AIK+VF D + ++ TKSMIGH LGAAG +EAI T++A+
Sbjct: 298 INAHGTSTPVGDRAEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYH 357
Query: 445 GWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 493
G + PT+N ++ +PE+ +D VP ++ V+ A+SNSF FGGHN+V+ F
Sbjct: 358 GVIPPTINLEDPDPELDLDFVPE-PREAKVDYALSNSFAFGGHNAVLAF 405
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* Length = 451 | Back alignment and structure |
|---|
Score = 564 bits (1455), Expect = 0.0
Identities = 164/436 (37%), Positives = 239/436 (54%), Gaps = 12/436 (2%)
Query: 72 SPTASAPKREKDPKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVR 131
+ + R+V+TG+G+VS G + + +L+ G SG+ + A S +
Sbjct: 10 GTLEAQTQGPGSMTLRVVVTGIGIVSPLGCGKELVWQRLIGGGSGLRRLGDDIAGELSAK 69
Query: 132 FGGQIRD--------FSSKGYIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDR 183
GG ++D F + + K R++D + +VA AL EA +P+ R
Sbjct: 70 VGGTVQDVAEDPEGGFDPERSVPHKELRKMDRFIQMAMVAADEALAEAGWAPE--AEQQR 127
Query: 184 TRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNY 243
R VV SG+GG V +G ++++PF IP+ ++N+ + ++I GP
Sbjct: 128 ERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKHRFRGPLG 187
Query: 244 SISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQR-NEYPK 302
TACA + A IR GE D+++AGG EAA +GGF A RALS +E P
Sbjct: 188 CPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEPV 247
Query: 303 RASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDG 362
RASRP+D+DRDGFVMGEG ++V+ESL+HA+ RGA IAE +G T DA+HMT DG
Sbjct: 248 RASRPFDRDRDGFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTAGPDDG 307
Query: 363 LGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSM 422
G + +L V+PE+V+YVNAHATST GD E+ A+K VF + ++ TKS
Sbjct: 308 SGAMRAMKLALRMGDVAPEQVDYVNAHATSTPVGDAGEIEALKTVFGVGAGPAISSTKSA 367
Query: 423 IGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVT-IDTVPNVKKQHHVNVAISNS 481
GH LGAAG +EA +I A+ G L TLN ++ +P +D + + V +A+SN
Sbjct: 368 TGHLLGAAGAIEAAFSILALRDGVLPGTLNLEHPDPAADGLDLIGPAARHVPVEIALSNG 427
Query: 482 FGFGGHNSVVVFAPFS 497
FGFGG N+ V+F +
Sbjct: 428 FGFGGVNASVLFRRYP 443
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A Length = 428 | Back alignment and structure |
|---|
Score = 561 bits (1449), Expect = 0.0
Identities = 174/428 (40%), Positives = 260/428 (60%), Gaps = 12/428 (2%)
Query: 79 KREKDPKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQI-- 136
+R+VITG+GLVS S +++ + +LL GESG + F+ + + +I
Sbjct: 3 HHHHHHMRRVVITGLGLVSPLASGVEETWKRLLAGESGARRVTEFEVDDLACQIACRIPV 62
Query: 137 -----RDFSSKGYIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVG 191
F+ ++D K R++D Y + A +AL++A P+ E D+ R GV++G
Sbjct: 63 GDGTNGTFNPDLHMDPKEQRKVDPFIVYAVGAADQALDDAGWHPENDE--DQVRTGVLIG 120
Query: 192 SGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACAT 251
SG+GG+ L KG ++I+PFFIP + N+ S ++I L GPN+S+ TACAT
Sbjct: 121 SGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKHKLRGPNHSVVTACAT 180
Query: 252 ANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALS-QRNEYPKRASRPWDK 310
+ AA I G+ D+MVAGGTE+ + + GF AC+ALS +RN+ P ASRP+D+
Sbjct: 181 GTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERNDDPTAASRPYDE 240
Query: 311 DRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIA 370
DRDGFVMGEG GI+V+E LEHA+ RGA I AE +G ++ DA H+T P G G C+
Sbjct: 241 DRDGFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMV 300
Query: 371 KSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGA 429
+L+ AG+ P+E++Y+NAH TST+ D E+ A+++V + +++ M+ TKS IGH LGA
Sbjct: 301 AALKRAGIVPDEIDYINAHGTSTM-ADTIELGAVERVVGEAAAKISMSSTKSSIGHLLGA 359
Query: 430 AGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNS 489
AG EA+ + AI TLN DN + ID VP+ ++ ++VA+SNSFGFGG N+
Sbjct: 360 AGAAEAVFSTLAIRDNIAPATLNLDNPAAQTRIDLVPHKPRERKIDVALSNSFGFGGTNA 419
Query: 490 VVVFAPFS 497
+V ++
Sbjct: 420 SLVLRRYT 427
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 424 | Back alignment and structure |
|---|
Score = 560 bits (1445), Expect = 0.0
Identities = 124/416 (29%), Positives = 197/416 (47%), Gaps = 10/416 (2%)
Query: 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGY 144
K+R+VITG+G+ + G+ +F+ L G + I FD S + + +
Sbjct: 2 KRRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEADFDPVAEG 61
Query: 145 IDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGV 204
+ R+D ++ + R A + L + +D R+GV +GS + TS
Sbjct: 62 FGPRELDRMDRASQFAVACAREAFAASGL---DPDTLDPARVGVSLGSAVAAATSLEREY 118
Query: 205 EALIQKGY------KKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYA 258
L G ++ Y + ++ A +A G GP +ST C +
Sbjct: 119 LLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGN 178
Query: 259 AANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMG 318
A I G D+M AG + I P V F A RA + RN+ P+ ASRP+D RDGFV+
Sbjct: 179 AVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDDPEHASRPFDGTRDGFVLA 238
Query: 319 EGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGV 378
EG + V+E + A+ RGA I AE G A C+A+HMT ++DG ++ I +L+++
Sbjct: 239 EGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRT 298
Query: 379 SPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAIT 437
+++Y+NAH + T D E A K+ + ++ KSM+GH LGA G LE
Sbjct: 299 DATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAA 358
Query: 438 TIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 493
+ A+ G + PT N +PE +D VP ++ + ++ GFGG S +V
Sbjct: 359 CVLALEHGVVPPTANLRTSDPECDLDYVPLEARERKLRSVLTVGSGFGGFQSAMVL 414
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A Length = 438 | Back alignment and structure |
|---|
Score = 560 bits (1446), Expect = 0.0
Identities = 161/428 (37%), Positives = 234/428 (54%), Gaps = 13/428 (3%)
Query: 79 KREKDPKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIR- 137
+ +R+VITG+GLV+ G +++L+ GESGI + + S +
Sbjct: 14 EGRSRLHRRVVITGIGLVTPLGVGTHLVWDRLIGGESGIVSLVGEEYKSIPCSVAAYVPR 73
Query: 138 -----DFSSKGYIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGS 192
F+ + ++ + + + + A A++++ PQ D+ GV +G
Sbjct: 74 GSDEGQFNEQNFVSKSDIKSMSSPTIMAIGAAELAMKDSGWHPQ--SEADQVATGVAIGM 131
Query: 193 GMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATA 252
GM L + KGY K++PFF+P + NM + ++I L GPN+++STAC T
Sbjct: 132 GMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYKLKGPNHAVSTACTTG 191
Query: 253 NYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDR 312
+ + I G+ D+MVAGGT++ I P + GF RALS N PK A RP+ R
Sbjct: 192 AHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALS-TNSDPKLACRPFHPKR 250
Query: 313 DGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKS 372
DGFVMGEG +LV+E EHA++R A I AE LG ++ DA H+T P +G G C+A +
Sbjct: 251 DGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAA 310
Query: 373 LEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAG 431
L+DAGV PEE++Y+NAHATST GD AE AIK +FKD + ++ TK GH LGAAG
Sbjct: 311 LKDAGVQPEEISYINAHATSTPLGDAAENKAIKHLFKDHAYALAVSSTKGATGHLLGAAG 370
Query: 432 GLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVN---VAISNSFGFGGHN 488
+EA T A L PTLN D EPE ++ VP ++ + ++NSFGFGG N
Sbjct: 371 AVEAAFTTLACYYQKLPPTLNLDCSEPEFDLNYVPLKAQEWKTEKRFIGLTNSFGFGGTN 430
Query: 489 SVVVFAPF 496
+ + A
Sbjct: 431 ATLCIAGL 438
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} Length = 412 | Back alignment and structure |
|---|
Score = 555 bits (1432), Expect = 0.0
Identities = 129/411 (31%), Positives = 189/411 (45%), Gaps = 9/411 (2%)
Query: 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASS-FSVRFGGQIRDFSSKG 143
KR+VITGMG V+ GS D+ L G + + + +D R + F+
Sbjct: 5 MKRVVITGMGGVTALGSRWDEIEAALKAGRNAVRRMPDWDYFESLHTRLAAPLPGFAQPA 64
Query: 144 YIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTG 203
K R + Y + A AL +A + E++ R+GV GS G +
Sbjct: 65 DWPRKKTRSMGRVSMYAVRASELALADAGFAGD--ESISDGRMGVAYGSSSGSVEPIRAF 122
Query: 204 VEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHI 263
L +T + + + +++ L G S+ACA+ + A +I
Sbjct: 123 GTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWDLKGRIVPTSSACASGSQAIGYAYENI 182
Query: 264 RRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGI 323
G+ +M+AGG E V F A S RN+ P RP+D RDG V+GEG
Sbjct: 183 AMGKQTLMLAGGAEELS-GPAVAVFDTLYATSTRNDEPHLTPRPFDAKRDGLVVGEGAAT 241
Query: 324 LVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEV 383
LV+E EHA RGA I AE +G D HMT P ++ + +LEDA + +
Sbjct: 242 LVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQP--TASTMARAMQLALEDAKLDANAI 299
Query: 384 NYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAIT 443
YVNAH TST GD+AE A + F + M ++ KS +GH LGA G LEA TI+ +
Sbjct: 300 AYVNAHGTSTDRGDVAESQATARTFGER--MPISSLKSYVGHTLGACGALEAWWTIEMMK 357
Query: 444 TGWLHPTLNQDNLEPEVT-IDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 493
W PTLN ++P +D + + +SN+F FGG N+ ++F
Sbjct: 358 RNWYAPTLNLTEVDPACAPLDYIRGEARAIDAEYVMSNNFAFGGINTSLIF 408
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} Length = 434 | Back alignment and structure |
|---|
Score = 554 bits (1430), Expect = 0.0
Identities = 134/412 (32%), Positives = 209/412 (50%), Gaps = 10/412 (2%)
Query: 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSF--SVRFGGQIRDFSSK 142
+V+TG+ + + +D + + LL+ +SGI +D F VR GG + +
Sbjct: 27 FPYVVVTGIAMTTALATDAETTWKLLLDRQSGIRTLDDPFVEEFDLPVRIGGHLLEEFDH 86
Query: 143 GYIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTT 202
+ RR+ R V RR E A +D R+ V +G+G+G
Sbjct: 87 -QLTRIELRRMGYLQRMSTVLSRRLWENAGS-----PEVDTNRLMVSIGTGLGSAEELVF 140
Query: 203 GVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANH 262
+ + +G K ++P + + N +A + ++ + +ACA+ A
Sbjct: 141 SYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAKAGVMTPVSACASGAEAIARAWQQ 200
Query: 263 IRRGETDIMVAGGTEAAIIPTGVGGFIACR-ALSQRNEYPKRASRPWDKDRDGFVMGEGC 321
I GE D + GG E I + GF R +S N+ P A RP+D+DRDGFV GEG
Sbjct: 201 IVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDRDRDGFVFGEGG 260
Query: 322 GILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPE 381
+L++E+ EHA RGANI+A +G ++T D HM P +G I ++++ AG++P
Sbjct: 261 ALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPG 320
Query: 382 EVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKA 441
++++VNAHAT T GDLAE AI + + KS +GH +GA G +E+I T+ A
Sbjct: 321 DIDHVNAHATGTQVGDLAEGRAINNALGG-NRPAVYAPKSALGHSVGAVGAVESILTVLA 379
Query: 442 ITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 493
+ + PTLN NL+PE+ +D V + + AI+NSFGFGGHN + F
Sbjct: 380 LRDQVIPPTLNLVNLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVAIAF 431
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 415 | Back alignment and structure |
|---|
Score = 551 bits (1423), Expect = 0.0
Identities = 120/421 (28%), Positives = 191/421 (45%), Gaps = 10/421 (2%)
Query: 79 KREKDPKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRD 138
+ D K ++ITG+G+V+ G + +++ +L+G G+ P+ RFD S + GQI D
Sbjct: 2 DYKDDDDKSVLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDD 61
Query: 139 FSSKGYIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLT 198
F + +I G+ + D R L A AL++A P E++ +GVV + GG
Sbjct: 62 FHAPDHIPGRLLPQTDPSTRLALTAADWALQDAKADP---ESLTDYDMGVVTANACGGFD 118
Query: 199 SFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYA 258
L +G K ++ + + + ++I G+ GP+ ++ A
Sbjct: 119 FTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALVAEQAGGLDALGH 178
Query: 259 AANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMG 318
A IRRG T ++V+GG ++A+ P G IA +S + P RA P+D+ G+V G
Sbjct: 179 ARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRISTATD-PDRAYLPFDERAAGYVPG 236
Query: 319 EGCGILVMESLEHAMKRGA-NIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAG 377
EG ILV+E A RG + E G A T D + G+ I +L DAG
Sbjct: 237 EGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGS---GRPAGLERAIRLALNDAG 293
Query: 378 VSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAIT 437
PE+V+ V A D AE AI +VF + + K+ G G L+ +T
Sbjct: 294 TGPEDVDVVFADGAGVPELDAAEARAIGRVFGREG-VPVTVPKTTTGRLYSGGGPLDVVT 352
Query: 438 TIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPFS 497
+ ++ G + PT ++ E ID V + A+ + G G NS V F+
Sbjct: 353 ALMSLREGVIAPTAGVTSVPREYGIDLVLGEPRSTAPRTALVLARGRWGFNSAAVLRRFA 412
Query: 498 P 498
P
Sbjct: 413 P 413
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A Length = 431 | Back alignment and structure |
|---|
Score = 539 bits (1391), Expect = 0.0
Identities = 160/430 (37%), Positives = 237/430 (55%), Gaps = 24/430 (5%)
Query: 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASS--------------FSVR 131
+R+V+TG+G+V+ G ++ + +L++GE GI + D S +
Sbjct: 1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSK 60
Query: 132 FGGQIRDFSSKGYIDGKND---RRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGV 188
+ S+ G D + + + Y + A AL +A P E ++ R GV
Sbjct: 61 VAAFVPYGSNPGEFDEALWLNSKAVANFIGYAVCAADEALRDAEWLP--TEEEEKERTGV 118
Query: 189 VVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTA 248
+G G+G + + + +K ++++PFFIP + NM S +++ G GPN++ TA
Sbjct: 119 SIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTA 178
Query: 249 CATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQR-NEYPKRASRP 307
CAT + A I+ G+ D+MVAGGTE++I V GF RALS + N P+ ASRP
Sbjct: 179 CATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRP 238
Query: 308 WDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSS 367
+D DRDGFV+GEG G++V+E EHA +RGA I AE G ++ DAHH+T P DG G
Sbjct: 239 FDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVL 298
Query: 368 CIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD---TSEMKMNGTKSMIG 424
+ ++L +G+ P +++YVNAHATST GD E AIK VF + + + + TK G
Sbjct: 299 AMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATG 358
Query: 425 HGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVP-NVKKQHHVNVAISNSFG 483
H LGAAG +EAI +I AI G TLN N +P +P K+ V A+SNSFG
Sbjct: 359 HLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFG 418
Query: 484 FGGHNSVVVF 493
FGG N+ ++F
Sbjct: 419 FGGTNASLLF 428
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* Length = 428 | Back alignment and structure |
|---|
Score = 515 bits (1328), Expect = 0.0
Identities = 141/422 (33%), Positives = 218/422 (51%), Gaps = 11/422 (2%)
Query: 74 TASAPKREKDPKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFG 133
T A + +R+V+TGMG+VS GS+ ++ L E +SGIS + + F +
Sbjct: 11 TLEAQTQGPGSMRRVVVTGMGIVSSIGSNTEEVTASLREAKSGISRAEEYAELGFRCQVH 70
Query: 134 GQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSG 193
G D + +D + R + +A +A+ +A L+ E + R G+++GSG
Sbjct: 71 G-APDIDIESLVDRRAMRFHGRGTAWNHIAMDQAIADAGLTE---EEVSNERTGIIMGSG 126
Query: 194 MGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATAN 253
+ + +KG K++ PF +P ++++ SA LA + G NYSIS+ACAT+N
Sbjct: 127 GPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIKGINYSISSACATSN 186
Query: 254 YCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRD 313
+C A I+ G+ D M AGG E V S+ N+ P ASR +DK+RD
Sbjct: 187 HCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSVLFDAMGAMSSKYNDTPSTASRAYDKNRD 246
Query: 314 GFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSL 373
GFV+ G G+LV+E LE A+ RGA I E +G T D + M P G G C+ +L
Sbjct: 247 GFVIAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAP--SGEGAIRCMKMAL 304
Query: 374 EDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGG 432
+++Y+N HATST AGD E+ AI+++F + TKS+ GH LGA G
Sbjct: 305 STV---TSKIDYINPHATSTPAGDAPEIEAIRQIFGAGDVCPPIAATKSLTGHSLGATGV 361
Query: 433 LEAITTIKAITTGWLHPTLNQDNLEPEVT-IDTVPNVKKQHHVNVAISNSFGFGGHNSVV 491
EAI ++ + ++ + + + L+P + V +N +SNSFGFGG N+ +
Sbjct: 362 QEAIYSLLMMQNNFICESAHIEELDPAFADMPIVRKRIDNVQLNTVLSNSFGFGGTNATL 421
Query: 492 VF 493
VF
Sbjct: 422 VF 423
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... Length = 406 | Back alignment and structure |
|---|
Score = 504 bits (1301), Expect = e-178
Identities = 145/410 (35%), Positives = 221/410 (53%), Gaps = 12/410 (2%)
Query: 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYI 145
KR VITG+G+VS G++ + L EG SGI+ S G + + G I
Sbjct: 2 KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNV-KLDTTGLI 60
Query: 146 DGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVE 205
D K R + D Y ++ +A+ +A LSP+ + R+G++ GSG G G +
Sbjct: 61 DRKVVRFMSDASIYAFLSMEQAIADAGLSPE--AYQNNPRVGLIAGSGGGSPRFQVFGAD 118
Query: 206 AL-IQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIR 264
A+ +G K + P+ + ++ + SA LA + G NYSIS+ACAT+ +C A I+
Sbjct: 119 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQ 178
Query: 265 RGETDIMVAGGTEAAIIPTGVGGFIACRALSQR-NEYPKRASRPWDKDRDGFVMGEGCGI 323
G+ DI+ AGG E F A ALS + N+ P++ASR +D RDGFV+ G G+
Sbjct: 179 LGKQDIVFAGGGEELCWEMACE-FDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGM 237
Query: 324 LVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEV 383
+V+E LEHA+ RGA+I AE +G T D M P G G C+ ++ +
Sbjct: 238 VVVEELEHALARGAHIYAEIVGYGATSDGADMVAP--SGEGAVRCMKMAMHGVD---TPI 292
Query: 384 NYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAIT 443
+Y+N+H TST GD+ E+ AI++VF D S ++ TK+M GH LGAAG EAI ++ +
Sbjct: 293 DYLNSHGTSTPVGDVKELAAIREVFGDKS-PAISATKAMTGHSLGAAGVQEAIYSLLMLE 351
Query: 444 TGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 493
G++ P++N + L+ + + + +SNSFGFGG N+ +V
Sbjct: 352 HGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVM 401
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 381 bits (980), Expect = e-118
Identities = 75/426 (17%), Positives = 135/426 (31%), Gaps = 40/426 (9%)
Query: 101 SDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQI-RDFSSKGY-IDGKNDRRLDDCWR 158
+I + ++ G + A F GQI +++K Y I ++D
Sbjct: 956 FEIPETGEYSVKLLKGATLYI-PKALRFDRLVAGQIPTGWNAKTYGISDDIISQVDPITL 1014
Query: 159 YCLVAGRRALEEASLSPQ--VLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKIT 216
+ LV+ A + ++ + + + + +G GSGMGG+++ + + +
Sbjct: 1015 FVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQ-N 1073
Query: 217 PFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGT 276
I M + + + GP + ACAT+ I G+ I + GG
Sbjct: 1074 DILQESFINTMSAWVNMLLISSSGPIKTPVGACATSVESVDIGVETILSGKARICIVGGY 1133
Query: 277 EAAIIPTGVGGFIACRALSQRNE------YPKRASRPWDKDRDGFVMGEGCGILVMESLE 330
+ G F +A S E P SRP R+GF+ +G GI ++ +
Sbjct: 1134 DD-FQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFMEAQGAGIQIIMQAD 1192
Query: 331 HAMKRGANIIAEYLGGAVTCDAHHMT--DPRSDGLGVSSCIAKSLEDAGV---------- 378
A+K G I A D + P L + S++ A
Sbjct: 1193 LALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQ 1252
Query: 379 -----------SPEEVNYVNAHATSTLAGDLAEVNAIKKVF-KDTSEMKMNGTKSMIGHG 426
E+ + A + D E + + +E ++ + G+
Sbjct: 1253 LVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGND 1312
Query: 427 LGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGG 486
A T G L + T N K + + G
Sbjct: 1313 FYKRDPRIAPLRGALATYGLTIDDLGVASFH---GTSTKANDKNESATINEMMKHLGRSE 1369
Query: 487 HNSVVV 492
N V+
Sbjct: 1370 GNPVIG 1375
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 194 bits (494), Expect = 1e-53
Identities = 48/280 (17%), Positives = 86/280 (30%), Gaps = 26/280 (9%)
Query: 229 SALLAIDTGLMGPNYSISTACATANYCFYAAANHI-----RRGETDIMVAGGTEAAIIPT 283
A LA+ G+ P Y A +G +
Sbjct: 1190 QADLALKMGV--PIY-----GIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASP 1242
Query: 284 GVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEY 343
+ R L R + + W ++ + E I + E ++R I E
Sbjct: 1243 NLNMKYRKRQLVTR----EAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEA 1298
Query: 344 LGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNA 403
+ + + +L G++ +++ + H TST A D E
Sbjct: 1299 ESQLRAA-QQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESAT 1357
Query: 404 IKKVFKD-----TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEP 458
I ++ K + + K + GH GAAG ++ + +G + N DN++
Sbjct: 1358 INEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDK 1417
Query: 459 EVT-IDTVPNVKKQHH---VNVAISNSFGFGGHNSVVVFA 494
+ + V K V SFGFG +
Sbjct: 1418 ILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVV 1457
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878 | Back alignment and structure |
|---|
Score = 318 bits (815), Expect = 4e-96
Identities = 77/430 (17%), Positives = 141/430 (32%), Gaps = 42/430 (9%)
Query: 101 SDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQI-RDFSSKGY-IDGKNDRRLDDCWR 158
+I + + G + A F GQI + ++ Y + +++D
Sbjct: 1130 FEIPETGQYTVRLRKGA-TLLIPKALQFDRLVAGQIPTGWDARRYGVPEDIIQQVDPVTL 1188
Query: 159 YCLVAGRRALEEASLSP--QVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKIT 216
Y LV+ AL + ++ + + + + +G +GSG+GG ++ +
Sbjct: 1189 YVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDK-PVQK 1247
Query: 217 PFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGG- 275
+ M + + + GP + ACATA + I +G+ + + GG
Sbjct: 1248 DILQESFVNTMAAWVNMLLLSSTGPIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGF 1307
Query: 276 ----TEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILVMESLEH 331
E + +G + R P SRP R+GF+ +GCG+ V+ + +
Sbjct: 1308 DDFQEEGSYEFANMGATSNAKEEFARGREPGEMSRPTSTTRNGFMESQGCGVQVIMTAQL 1367
Query: 332 AMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNY------ 385
A++ G I + D + P + G GV + + + ++ Y
Sbjct: 1368 ALEMGVPIYGIVAMTSTATDKIGRSVP-APGQGVLTTAREKSGNFPSPLLDIKYRRRQLE 1426
Query: 386 -----VNAHATSTLAGDLAEVNAIKKVFKDT--SEMKMNGTKSMIGHGLGAAGGLEAITT 438
+ S EV AIK + + + H A EA
Sbjct: 1427 LRRQQIKQWKESEYLYLQEEVAAIKSQRSEEDGPFDETAYLRERTEHIEREARRQEAEAQ 1486
Query: 439 IKAITTGW--------LHPTLNQDNLEPEVTID--------TVPNVKKQHHVNVAISNSF 482
W L L L + + TV N K + V
Sbjct: 1487 TSFGNEFWRRDSRIAPLRGALATWGLTID-DLGVASFHGTSTVANDKNESDVICQQLKHL 1545
Query: 483 GFGGHNSVVV 492
G N+V+
Sbjct: 1546 GRTKGNAVLG 1555
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878 | Back alignment and structure |
|---|
Score = 154 bits (390), Expect = 5e-40
Identities = 33/180 (18%), Positives = 64/180 (35%), Gaps = 11/180 (6%)
Query: 326 MESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNY 385
+ + +R +I E + + + +L G++ +++
Sbjct: 1461 FDETAYLRERTEHIEREARRQEAEAQTSFGNEFWRRD-SRIAPLRGALATWGLTIDDLGV 1519
Query: 386 VNAHATSTLAGDLAEVNAIKKVFK-----DTSEMKMNGTKSMIGHGLGAAGGLEAITTIK 440
+ H TST+A D E + I + K + + K + GH GAAG ++
Sbjct: 1520 ASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKGAAGAWMLNGCLQ 1579
Query: 441 AITTGWLHPTLNQDNLEPEV-TIDTVPNVKK---QHHVNVAISNSFGFGGHN-SVVVFAP 495
+ TG + N DN++ + D + + + SFGFG + P
Sbjct: 1580 VLNTGIVPGNRNADNVDKVMEQFDYIVYPSRSIKTDGIKAFSVTSFGFGQKGAQAIGVHP 1639
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887 | Back alignment and structure |
|---|
Score = 289 bits (741), Expect = 3e-86
Identities = 65/375 (17%), Positives = 120/375 (32%), Gaps = 39/375 (10%)
Query: 101 SDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQI-RDFSSKGY-IDGKNDRRLDDCWR 158
+I + ++ G + A F GQI +++K Y I ++D
Sbjct: 1155 FEIPETGEYSVKLLKGATLYI-PKALRFDRLVAGQIPTGWNAKTYGISDDIISQVDPITL 1213
Query: 159 YCLVAGRRALEEASLSPQ--VLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKIT 216
+ LV+ A + ++ + + + + +G GSGMGG+++ + +
Sbjct: 1214 FVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDE-PVQN 1272
Query: 217 PFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGT 276
I M + + + GP + ACAT+ I G+ I + GG
Sbjct: 1273 DILQESFINTMSAWVNMLLISSSGPIKTPVGACATSVESVDIGVETILSGKARICIVGGY 1332
Query: 277 EAAIIPTGVGGFIACRALSQRNE------YPKRASRPWDKDRDGFVMGEGCGILVMESLE 330
+ G F +A S E P SRP R+GF+ +G GI ++ +
Sbjct: 1333 DD-FQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFMEAQGAGIQIIMQAD 1391
Query: 331 HAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVS----------- 379
A+K G I A D + P + G G+ + + +
Sbjct: 1392 LALKMGVPIYGIVAMAATATDKIGRSVP-APGKGILTTAREHHSSVKYASPNLNMKYRKR 1450
Query: 380 -------------PEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHG 426
E+ + A + D E + E + + G
Sbjct: 1451 QLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHN-EAESQLRAAQQQWG 1509
Query: 427 LGAAGGLEAITTIKA 441
I ++
Sbjct: 1510 NDFYKRDPRIAPLRG 1524
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887 | Back alignment and structure |
|---|
Score = 157 bits (397), Expect = 5e-41
Identities = 40/239 (16%), Positives = 76/239 (31%), Gaps = 14/239 (5%)
Query: 265 RGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324
+G + + R L R + W ++ + E I
Sbjct: 1423 KGILTTAREHHSSVKYASPNLNMKYRKRQLVTRE----AQIKDWVENELEALKLEAEEIP 1478
Query: 325 VMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVN 384
+ E ++R I E + + + +L G++ +++
Sbjct: 1479 SEDQNEFLLERTREIHNEAESQLRAA-QQQWGNDFYKRDPRIAPLRGALATYGLTIDDLG 1537
Query: 385 YVNAHATSTLAGDLAEVNAIKKVF-----KDTSEMKMNGTKSMIGHGLGAAGGLEAITTI 439
+ H TST A D E I ++ + + + K + GH GAAG +
Sbjct: 1538 VASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGAL 1597
Query: 440 KAITTGWLHPTLNQDNLEPEVT-IDTVPNVKKQHH---VNVAISNSFGFGGHNSVVVFA 494
+ + +G + N DN++ + + V K V SFGFG +
Sbjct: 1598 QILNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVV 1656
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 | Back alignment and structure |
|---|
Score = 150 bits (381), Expect = 7e-39
Identities = 97/430 (22%), Positives = 159/430 (36%), Gaps = 55/430 (12%)
Query: 88 IVITGM-----GLVSVFGSDIDKFYNKLLEGESGISPIDR-FDASSFSV-RFGGQIRD-- 138
+VI GM ++++F+ L+ G ++ DR + A + + R G+++D
Sbjct: 4 VVIAGMSGKLPE-----SENLEEFWANLIGGVDMVTADDRRWKAGLYGLPRRMGKLKDLS 58
Query: 139 ------FSSKGYIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGS 192
F + K +D R L A+ + ++P L T GV VG
Sbjct: 59 RFDASFFG----VHSKQANTMDPQLRMLLEVTYEAIVDGGINPASLRG---TSTGVWVGV 111
Query: 193 GMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATA 252
++ + + + + + + M + L+ GP+ +I TAC+++
Sbjct: 112 -------SSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDFKGPSITIDTACSSS 164
Query: 253 NYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDR 312
+A IR GE V GG + P F+ LS R +D +
Sbjct: 165 LLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLS-----QDGTCRSFDAEG 219
Query: 313 DGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHH---MTDPRSDGLGVSSCI 369
G+ E +++ A +R + A L D +T P G I
Sbjct: 220 TGYCRAEAVVAVLLTKKSLA-RR---VYATILNAGTNTDGSKEQGVTFP--SGDVQEQLI 273
Query: 370 AKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSE--MKMNGTKSMIGHGL 427
AG PE + Y+ AH T T GD E+N I T + + TKS +GH
Sbjct: 274 RSLYAPAGPDPESLEYIEAHGTGTKVGDPQELNGIVNALCATRREPLLIGSTKSNMGHPE 333
Query: 428 GAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDT-----VPNVKKQHHVNVAISNSF 482
A+G I + ++ G P L+ PE+ V + NSF
Sbjct: 334 PASGVAALIKVLLSLEHGVWAPNLHYHTPNPEIPALQDGRLQVVDRPLPIRGGNVGINSF 393
Query: 483 GFGGHNSVVV 492
GFGG N V+
Sbjct: 394 GFGGSNVHVI 403
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Length = 915 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 1e-27
Identities = 85/307 (27%), Positives = 130/307 (42%), Gaps = 38/307 (12%)
Query: 167 ALEEASLSPQVLENMDRTRIGVVVG---SGMGGLTSFTTGVEALIQKGYKKITPFFIPYS 223
+E A + P L T GV +G G G T+ VE G
Sbjct: 106 LVENAGIDPHSLRG---TATGVFLGVAKFGYGEDTAAAEDVEGYSVTG-----------V 151
Query: 224 ITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPT 283
+ S ++ GL GP+ S+ TAC+++ + A +R+GE+ + V GG P
Sbjct: 152 APAVASGRISYTMGLEGPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPG 211
Query: 284 GVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEY 343
F RAL+ S+ + DGF EG ++++E L A + G ++A
Sbjct: 212 VFVDFSRQRALA-----ADGRSKAFGAGADGFGFSEGVTLVLLERLSEARRNGHEVLAVV 266
Query: 344 LGGAVTCDAHHMTDPRSDGL----GVS--SCIAKSLEDAGVSPEEVNYVNAHATSTLAGD 397
G A+ D S+GL G + I ++LE G+ P +V+ V AH T T GD
Sbjct: 267 RGSALNQDG------ASNGLSAPSGPAQRRVIRQALESCGLEPGDVDAVEAHGTGTALGD 320
Query: 398 LAEVNAIKKVF-KDTSEMK---MNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQ 453
E NA+ + +D + + KS IGH AAG + + A+ G L TL+
Sbjct: 321 PIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATLHV 380
Query: 454 DNLEPEV 460
+ P V
Sbjct: 381 EEPTPHV 387
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Length = 917 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 3e-27
Identities = 85/308 (27%), Positives = 130/308 (42%), Gaps = 39/308 (12%)
Query: 167 ALEEASLSPQVLENMDRTRIGVVVGSG----MGGLTSFTTGVEALIQKGYKKITPFFIPY 222
ALE A P L + GV G G V + G
Sbjct: 127 ALERAGHDPVSLRG---SATGVFTGVGTVDYGPRPDEAPDEVLGYVGTG----------- 172
Query: 223 SITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIP 282
+ +++ S +A GL GP ++ TAC++ + A +RR E + +AGG P
Sbjct: 173 TASSVASGRVAYCLGLEGPAMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSP 232
Query: 283 TGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAE 342
F + L+ +P+ K DGF + EG G+LV++ L A + G ++A
Sbjct: 233 GAFTEFRSQGGLA-----ADGRCKPFSKAADGFGLAEGAGVLVLQRLSAARREGRPVLAV 287
Query: 343 YLGGAVTCDAHHMTDPRSDGL----GVS--SCIAKSLEDAGVSPEEVNYVNAHATSTLAG 396
G AV D S+GL G + I ++LE+AGV +V+YV AH T T G
Sbjct: 288 LRGSAVNQDG------ASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAHGTGTRLG 341
Query: 397 DLAEVNAIKKVF-KDTSEMK---MNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLN 452
D EV+A+ + + + KS IGH AAG + + A+ G + TL+
Sbjct: 342 DPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLH 401
Query: 453 QDNLEPEV 460
D P++
Sbjct: 402 FDEPSPQI 409
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Length = 965 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 7e-26
Identities = 98/444 (22%), Positives = 163/444 (36%), Gaps = 91/444 (20%)
Query: 88 IVITGM-----GLVSVFGSDIDKFYNKLLEGESGISPIDR-FDASSFS-VRFGGQIRD-- 138
+VI GM ++ +F++ L+ G ++ DR + A + R G+++D
Sbjct: 6 VVIAGMSGKLPE-----SENLQEFWDNLIGGVDMVTDDDRRWKAGLYGLPRRSGKLKDLS 60
Query: 139 ------FSSKGYIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGS 192
F + K +D R L A+ + ++P L T GV VG
Sbjct: 61 RFDASFFG----VHPKQAHTMDPQLRLLLEVTYEAIVDGGINPDSLRG---THTGVWVGV 113
Query: 193 G----MGGLTSFTTGVEALIQKGYKKITPFFIPYSIT-NMGSAL---LAIDTGLMGPNYS 244
L+ + YS+ + + L+ GP+ +
Sbjct: 114 SGSETSEALSRDPETLVG---------------YSMVGCQRAMMANRLSFFFDFRGPSIA 158
Query: 245 ISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRA 304
+ TAC+++ A I G+ + GG + P F+ LS P+
Sbjct: 159 LDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLS-----PEGT 213
Query: 305 SRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGL- 363
+ +D +G+ EG +++ A +R + A L D + G+
Sbjct: 214 CKAFDTAGNGYCRSEGVVAVLLTKKSLA-RR---VYATILNAGTNTDG-----FKEQGVT 264
Query: 364 ---GVS--SCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVF-KDTSEMKMN 417
G I + AGV+PE Y+ AH T T GD E+N I + E +
Sbjct: 265 FPSGDIQEQLIRSLYQSAGVAPESFEYIEAHGTGTKVGDPQELNGITRALCATRQEPLLI 324
Query: 418 G-TKSMIGHGLGAAG--GLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHV 474
G TKS +GH A+G L + ++ G P L+ + PE+ ++ V
Sbjct: 325 GSTKSNMGHPEPASGLAAL--AKVLLSLEHGLWAPNLHFHSPNPEIPALLDGRLQ----V 378
Query: 475 ----------NVAISNSFGFGGHN 488
NV I+ SFGFGG N
Sbjct: 379 VDQPLPVRGGNVGIN-SFGFGGSN 401
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.9 bits (131), Expect = 5e-08
Identities = 62/437 (14%), Positives = 126/437 (28%), Gaps = 152/437 (34%)
Query: 81 EKDPKKRIVITGMGLVSVFGSDI-DKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDF 139
KD + + ++ KF ++L F S +
Sbjct: 57 SKDAVSGTLRL-FWTLLSKQEEMVQKFVEEVLRINYK------FLMSPIKTEQ--RQPSM 107
Query: 140 SSKGYIDGK----NDRRL---DDCWRYCLVAG-RRALEEASLSPQVLENMDRTRIGVVVG 191
++ YI+ + ND ++ + R R+AL E L P V++
Sbjct: 108 MTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLE--LRPA---------KNVLI- 155
Query: 192 SGMGGLTSFTTG-----VEALIQKGYKKITPFFIPYSITNMGS-----ALLAIDTGL--- 238
G+ G +G ++ + + F I + + N+ + +L + L
Sbjct: 156 DGVLG-----SGKTWVALDVCLSYKVQCKMDFKI-FWL-NLKNCNSPETVLEMLQKLLYQ 208
Query: 239 MGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRN 298
+ PN++ + ++H + I +A + R L +
Sbjct: 209 IDPNWT-------------SRSDHSSNIKLRIHSI---QAEL-----------RRLLKSK 241
Query: 299 EYPK--------RASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTC 350
Y + ++ W+ C IL+ R + ++L A T
Sbjct: 242 PYENCLLVLLNVQNAKAWN------AFNLSCKILLT-------TRFKQV-TDFLSAATTT 287
Query: 351 DA---HH---MTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAI 404
HH +T L + + +D P EV N S +A
Sbjct: 288 HISLDHHSMTLTPDEVKSL-LLKYLDCRPQD---LPREVLTTNPRRLSIIA-------ES 336
Query: 405 KKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEP--EVTI 462
+ T + W H +N D L E ++
Sbjct: 337 IRDGLATWD-------------------------------NWKH--VNCDKLTTIIESSL 363
Query: 463 DTV-PNVKKQHHVNVAI 478
+ + P ++ +++
Sbjct: 364 NVLEPAEYRKMFDRLSV 380
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.3 bits (101), Expect = 2e-04
Identities = 64/499 (12%), Positives = 134/499 (26%), Gaps = 176/499 (35%)
Query: 20 VKSNGAASLAQY--SGLRPAENFQFASAGITTTIKQSGLICSSGPKCRTIRVMASPTASA 77
+ S + ++ LR N++F + I T +Q ++ + R R+ A
Sbjct: 71 LLSKQEEMVQKFVEEVLRI--NYKFLMSPIKTEQRQPSMMTRMYIEQRD-RLYNDNQVFA 127
Query: 78 P---KREK------------DPKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDR 122
R + P K ++I G+ GS G++ ++ +D
Sbjct: 128 KYNVSRLQPYLKLRQALLELRPAKNVLIDGVL-----GS-----------GKTWVA-LDV 170
Query: 123 FDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDC----WRYCLVAGRRALEEASLSPQVL 178
+ + +I F +++ KN + + + P
Sbjct: 171 CLSYKVQCKMDFKI--F----WLNLKNCNSPETVLEMLQKLLYQ----------IDPNWT 214
Query: 179 ENMDRT-RIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTG 237
D + I + + S L L K Y+ LL +
Sbjct: 215 SRSDHSSNIKLRIHSIQAELRRL------LKSKPYEN---------------CLLVLL-- 251
Query: 238 LMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGF-IACRAL-S 295
+++ + F ++C+ L +
Sbjct: 252 ------------------------NVQNAKA----------------WNAFNLSCKILLT 271
Query: 296 QRNEY-------PKRASRPWDKDRDGFVMGEGCGILV------MESLEHAMKRGA----N 338
R + D E +L+ + L + +
Sbjct: 272 TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLS 331
Query: 339 IIAEYLGGA---------VTCDAHHMTDPRSDGLGVSSCIA--------KSLEDAGVSPE 381
IIAE + V CD + S + K + V P
Sbjct: 332 IIAESIRDGLATWDNWKHVNCDKLTTI--------IESSLNVLEPAEYRKMFDRLSVFPP 383
Query: 382 EVNYVNAHATSTLAGDL--AEVNAIKKVFKDTSEMKMNGTKSMIG-HGLGAAGGLEAITT 438
+ + S + D+ ++V + S ++ +S I + LE
Sbjct: 384 SAH-IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI----YLELKVK 438
Query: 439 IKAITTGWLHPTL-NQDNL 456
++ LH ++ + N+
Sbjct: 439 LENEYA--LHRSIVDHYNI 455
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 498 | |||
| 3ho9_A | 427 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, | 100.0 | |
| 1e5m_A | 416 | KAS II, beta ketoacyl acyl carrier protein synthas | 100.0 | |
| 2gqd_A | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli | 100.0 | |
| 4ewg_A | 412 | Beta-ketoacyl synthase; ssgcid, structural genomic | 100.0 | |
| 3o04_A | 413 | LMO2201 protein, beta-keto-acyl carrier protein sy | 100.0 | |
| 3kzu_A | 428 | 3-oxoacyl-(acyl-carrier-protein) synthase II; seat | 100.0 | |
| 1j3n_A | 408 | 3-oxoacyl-(acyl-carrier protein) synthase II; cond | 100.0 | |
| 1tqy_A | 424 | Beta-ketoacyl synthase/acyl transferase; alpha-bet | 100.0 | |
| 2iwz_A | 438 | 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho | 100.0 | |
| 1tqy_B | 415 | Actinorhodin polyketide putative beta-ketoacyl SY; | 100.0 | |
| 1ox0_A | 430 | Beta ketoacyl-acyl carrier protein synthase; trans | 100.0 | |
| 2wge_A | 416 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta | 100.0 | |
| 2gp6_A | 434 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol | 100.0 | |
| 2vba_A | 406 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop | 100.0 | |
| 4ddo_A | 451 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci | 100.0 | |
| 3mqd_A | 428 | Beta-ketoacyl synthase; ssgcid, ALS collaborative | 100.0 | |
| 2ix4_A | 431 | 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke | 100.0 | |
| 3hhd_A | 965 | Fatty acid synthase; transferase, multienzyme, meg | 100.0 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 100.0 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 100.0 | |
| 2hg4_A | 917 | DEBS, 6-deoxyerythronolide B synthase; ketosynthas | 100.0 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 100.0 | |
| 2qo3_A | 915 | Eryaii erythromycin polyketide synthase modules 3; | 100.0 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 100.0 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 100.0 | |
| 1wl4_A | 397 | Acetyl-coenzyme A acetyltransferase 2; thiolase fo | 100.0 | |
| 1wdk_C | 390 | 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame | 100.0 | |
| 1ulq_A | 401 | Putative acetyl-COA acetyltransferase; structural | 100.0 | |
| 2vu1_A | 392 | Acetyl-COA acetyltransferase; acyltransferase, PHB | 100.0 | |
| 2wu9_A | 442 | 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o | 100.0 | |
| 2ib8_A | 395 | Acetyl-COA acetyltransferase; thiolase fold, potas | 100.0 | |
| 1afw_A | 393 | 3-ketoacetyl-COA thiolase; fatty acid metabolism; | 100.0 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 100.0 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 100.0 | |
| 2iik_A | 418 | 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m | 100.0 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 100.0 | |
| 3goa_A | 387 | 3-ketoacyl-COA thiolase; metabolism, fatty acid, p | 100.0 | |
| 3svk_A | 407 | Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, | 99.97 | |
| 1ub7_A | 322 | 3-oxoacyl-[acyl-carrier protein] synthase; fatty a | 99.97 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.97 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 99.96 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 99.96 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 99.96 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 99.94 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 99.94 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 99.93 | |
| 4egv_A | 520 | Acetyl-COA acetyltransferase; NEW SUB-family, thio | 99.93 | |
| 2h84_A | 374 | Steely1; thiolase-fold, type III polyketide syntha | 99.92 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 99.91 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 99.88 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 99.87 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 99.87 | |
| 2d3m_A | 406 | Pentaketide chromone synthase; chalcone synthase, | 99.8 | |
| 1xpm_A | 396 | 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s | 99.77 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 99.77 | |
| 3a5r_A | 387 | Benzalacetone synthase; chalcone synthase, type II | 99.73 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.73 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 99.72 | |
| 1ee0_A | 402 | 2-pyrone synthase; polyketide synthase, thiolase f | 99.71 | |
| 1xes_A | 413 | Dihydropinosylvin synthase; native structure, tran | 99.7 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 99.68 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.68 | |
| 3awk_A | 402 | Chalcone synthase-like polyketide synthase; type I | 99.68 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 99.68 | |
| 2f82_A | 450 | HMG-COA synthase; HMGS1, transferase; 2.10A {Brass | 99.67 | |
| 1i88_A | 389 | CHS2, chalcone synthase 2; polyketide synthase, tr | 99.65 | |
| 3ov2_A | 393 | Curcumin synthase; type III polyketide synthase, t | 99.65 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 99.65 | |
| 3oit_A | 387 | OS07G0271500 protein; type III polyketide synthase | 99.62 | |
| 2p0u_A | 413 | Stilbenecarboxylate synthase 2; polyketide synthas | 99.6 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 99.56 | |
| 3e1h_A | 465 | PKSIIINC, putative uncharacterized protein; resorc | 99.52 | |
| 3euo_A | 379 | Type III pentaketide synthase; alpha helix, acyltr | 99.51 | |
| 3v4n_A | 388 | HMG-COA synthase; hydroxymethylglutaryl-COA syntha | 99.5 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 99.49 | |
| 3sqz_A | 425 | Putative hydroxymethylglutaryl-COA synthase; thiol | 99.45 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 99.42 | |
| 2p8u_A | 478 | Hydroxymethylglutaryl-COA synthase, cytoplasmic; h | 99.42 | |
| 2v4w_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 99.41 | |
| 2wya_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 99.1 |
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-83 Score=667.71 Aligned_cols=416 Identities=44% Similarity=0.740 Sum_probs=392.8
Q ss_pred CCCCCCCCCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHH
Q 010896 78 PKREKDPKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCW 157 (498)
Q Consensus 78 ~~~~~~~~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~ 157 (498)
+..+....++|+|||||+++|+|.+.++||++|++|+++++++++|+...++.+++|++++||+.+||++++.++|||++
T Consensus 10 ~~~~~~~~~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~d~~~ 89 (427)
T 3ho9_A 10 HGSACVSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKEQRKMDAFI 89 (427)
T ss_dssp -------CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTCSCCEEECCSSCCCTTTSCHHHHTTSCHHH
T ss_pred ccCCCCCCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCceeeCCccccccCccceeeEcCCCChhhcCCHHHHhhCCHHH
Confidence 34445567899999999999999999999999999999999999999988988999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhc
Q 010896 158 RYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTG 237 (498)
Q Consensus 158 ~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lg 237 (498)
+|+++++++||+|||+ .+++++..++||++|++.++.......+..+...+...++|+.++....|.++++|++.||
T Consensus 90 ~l~l~aa~~AL~dAGl---~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 166 (427)
T 3ho9_A 90 QYGIVAGVQAMQDSGL---EITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYG 166 (427)
T ss_dssp HHHHHHHHHHHHHHTC---CCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCC---CcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhC
Confidence 9999999999999999 5567888999999999999999888888889899999999999999999999999999999
Q ss_pred CCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccc
Q 010896 238 LMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVM 317 (498)
Q Consensus 238 l~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~ 317 (498)
++||+++|+++|+|++.||+.|+++|++|+||++||||+|.+.+|..+..|..+++++..++.|++.|+|||.+++|+++
T Consensus 167 l~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~v~ 246 (427)
T 3ho9_A 167 LRGPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVL 246 (427)
T ss_dssp CCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCSBCB
T ss_pred CCCCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhccCcccCCCCCCcccCCccCCCCCcee
Confidence 99999999999999999999999999999999999999999989999999999999998877788899999999999999
Q ss_pred cceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCc
Q 010896 318 GEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGD 397 (498)
Q Consensus 318 gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D 397 (498)
||||+++||+++++|+++|++||++|+|++.++|+++.+.|.+++.++.++++++|++||++++||||||+|||||+.+|
T Consensus 247 geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~HgtgT~~~d 326 (427)
T 3ho9_A 247 GDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGD 326 (427)
T ss_dssp BCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHH
T ss_pred eeeEEEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEecCCcCCCcC
Confidence 99999999999999999999999999999999999999999889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCccccc-Ccc
Q 010896 398 LAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQH-HVN 475 (498)
Q Consensus 398 ~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~-~~~ 475 (498)
.+|..++.++|+. ..+++++++|+++||+++|||++++++++++|++++|||++|+++|+|.+++++++...++. +.+
T Consensus 327 ~~e~~a~~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (427)
T 3ho9_A 327 KAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGME 406 (427)
T ss_dssp HHHHHHHHHHHGGGGGTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCCBCCBSSCEECSSCC
T ss_pred HHHHHHHHHHhcccCCCeEEecchHhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccccccccCCCCC
Confidence 9999999999985 35789999999999999999999999999999999999999999999999999998777666 789
Q ss_pred EEEEEccccccceeeEEEeeC
Q 010896 476 VAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 476 ~alv~s~G~gG~n~~~vl~~~ 496 (498)
++++|||||||+|+|+||++|
T Consensus 407 ~a~~~sfGfgG~na~~vl~~~ 427 (427)
T 3ho9_A 407 YTLCNSFGFGGTNGSLIFKKI 427 (427)
T ss_dssp EEEEEEEETTTEEEEEEEECC
T ss_pred EEEEeCccCCceeEEEEEEeC
Confidence 999999999999999999986
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-83 Score=661.17 Aligned_cols=410 Identities=45% Similarity=0.791 Sum_probs=389.6
Q ss_pred CCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHH
Q 010896 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAG 164 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa 164 (498)
+++|+|||||+++|.|.+.++||++|++|+++++++++|+...++.++++++++||+.+++++++.++|||+++|+++++
T Consensus 6 m~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~i~~fd~~~~~~~~~~~~~d~~~~l~l~aa 85 (416)
T 1e5m_A 6 KKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFLDRKEAKRMDRFCHFAVCAS 85 (416)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCCSCCGGGTSCHHHHHTSCHHHHHHHHHH
T ss_pred CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCeEeeCCccccccCccceeEEeCCCCccccCCHHHHHhcCHHHHHHHHHH
Confidence 36899999999999999999999999999999999999998888889999999999998899999999999999999999
Q ss_pred HHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCCCccc
Q 010896 165 RRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYS 244 (498)
Q Consensus 165 ~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~Gp~~t 244 (498)
++||+|||+ ++++++..++||++|++.++.....+.+..+...+...++|+.+++.+.|.++.+|++.||++||+++
T Consensus 86 ~~Al~dAg~---~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~~~ 162 (416)
T 1e5m_A 86 QQAINDAKL---VINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNC 162 (416)
T ss_dssp HHHHHHHTC---CCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCEEC
T ss_pred HHHHHHcCC---ChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCCCCceeC
Confidence 999999999 45677889999999999998888888888888888888999999999999999999999999999999
Q ss_pred cccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeEEE
Q 010896 245 ISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324 (498)
Q Consensus 245 v~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaaav 324 (498)
|+++|+|++.||+.|+++|++|+||++||||+|..++|..+..|..+++++.+++.|++.|||||.+++|+++|||++++
T Consensus 163 v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~geGaaav 242 (416)
T 1e5m_A 163 TVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGSGIL 242 (416)
T ss_dssp CCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCCTTBTTCCSBCBBCEEEEE
T ss_pred ccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcCCccCCCCCCccccccCccCCCCceeeeeEEEE
Confidence 99999999999999999999999999999999988899999999999999987777889999999999999999999999
Q ss_pred EEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHH
Q 010896 325 VMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAI 404 (498)
Q Consensus 325 vLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al 404 (498)
||+++++|+++|++||++|+|++.++|+++++.|.+++.++.++|+++|+++|++++||||||+|||||+.+|.+|.++|
T Consensus 243 vL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~~D~~E~~al 322 (416)
T 1e5m_A 243 ILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAI 322 (416)
T ss_dssp EEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHH
T ss_pred EECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhHCCEEEEECCCCcCcCHHHHHHH
Confidence 99999999999999999999999999999999999899999999999999999999999999999999999999999999
Q ss_pred HHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccc
Q 010896 405 KKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFG 483 (498)
Q Consensus 405 ~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G 483 (498)
.++|+. ..+++++++|+++||+++|||++++++++++|++++|||++|+++|+|.+++++++.+.+.++.|++++||||
T Consensus 323 ~~~~g~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfG 402 (416)
T 1e5m_A 323 KQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVPGQSRALIVDVALSNSFG 402 (416)
T ss_dssp HHHHGGGGGGSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCCCBSSCEECCCSEEEEEEEE
T ss_pred HHHHcccCCCCeeeCcchhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccCCccccCCCCEEEEcccc
Confidence 999985 2468999999999999999999999999999999999999999999999999999877777788999999999
Q ss_pred cccceeeEEEeeCC
Q 010896 484 FGGHNSVVVFAPFS 497 (498)
Q Consensus 484 ~gG~n~~~vl~~~~ 497 (498)
|||+|+|+||++|.
T Consensus 403 fGG~n~~~vl~~~~ 416 (416)
T 1e5m_A 403 FGGHNVTLAFKKYQ 416 (416)
T ss_dssp TTTEEEEEEEECCC
T ss_pred CCCeeEEEEEEeCC
Confidence 99999999999874
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-82 Score=658.58 Aligned_cols=412 Identities=44% Similarity=0.745 Sum_probs=388.2
Q ss_pred CCCCCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHH
Q 010896 82 KDPKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCL 161 (498)
Q Consensus 82 ~~~~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l 161 (498)
+.++++|+|||||+++|+|.+.++||++|++|+++++++++|+...++.++++++++||+.+++++++.++|||+++|++
T Consensus 24 m~~~~~vaI~G~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~i~~fd~~~~~~~~~~~~~d~~~~l~l 103 (437)
T 2gqd_A 24 MSQNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHIDKKEARRMDRFTQYAI 103 (437)
T ss_dssp ---CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCSSCCGGGTSCSTTTTTSCHHHHHHH
T ss_pred ccCCCCEEEEEeeEECCCCCCHHHHHHHHHcCCCceeeCCccccccCccceeEEeCCCChhcCCCHHHHHhcCHHHHHHH
Confidence 34457899999999999999999999999999999999999998888889999999999988899999999999999999
Q ss_pred HHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCCC
Q 010896 162 VAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGP 241 (498)
Q Consensus 162 ~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~Gp 241 (498)
+++++||+|||+ ++++++..++|||+|++.++.......+..+...+...++|+.+++.+.+.++.+|++.||++||
T Consensus 104 ~aa~~AL~dAGl---~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp 180 (437)
T 2gqd_A 104 VAAREAVKDAQL---DINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGP 180 (437)
T ss_dssp HHHHHHHHHHTC---CCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSS
T ss_pred HHHHHHHHHcCC---CccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhCCCCc
Confidence 999999999999 45677889999999999998888888888888888888999999999999999999999999999
Q ss_pred ccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCcccccee
Q 010896 242 NYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGC 321 (498)
Q Consensus 242 ~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGa 321 (498)
+++|+++|+|++.||+.|+++|++|+||++||||+|..++|..+..|..+++++. ++.|++.|+|||.+++|+++|||+
T Consensus 181 ~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~-~~~p~~~~~pfd~~~~G~v~geGa 259 (437)
T 2gqd_A 181 NGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPFQEGRDGFVMGEGA 259 (437)
T ss_dssp EECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC-CCCTTTSSCTTCTTCCSBCBBCEE
T ss_pred eEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCccC-CCCCccccCCCCCCCCCceeeceE
Confidence 9999999999999999999999999999999999999889999999999999986 455889999999999999999999
Q ss_pred EEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHH
Q 010896 322 GILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEV 401 (498)
Q Consensus 322 aavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~ 401 (498)
+++||+++++|+++|++||++|+|++.++|+++++.|.+++.++.++|+++|+++|++|+||||||+|||||+.+|++|.
T Consensus 260 aavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~~D~~E~ 339 (437)
T 2gqd_A 260 GILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEV 339 (437)
T ss_dssp EEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHH
T ss_pred EEEEECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhhCCEEEEECCCCcCcCHHHH
Confidence 99999999999999999999999999999999999998899999999999999999999999999999999999999999
Q ss_pred HHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEE
Q 010896 402 NAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISN 480 (498)
Q Consensus 402 ~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~ 480 (498)
+++.++|+. ..+++++++|+++||+++|+|++++++++++|+++.+||++|+++|+|.+++++++...+..+.+++++|
T Consensus 340 ~al~~~fg~~~~~~~v~s~k~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~ 419 (437)
T 2gqd_A 340 KAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVPNEAQDLDITYAMSN 419 (437)
T ss_dssp HHHHHHHGGGGTSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSCCSSCCSBCCBSSCEECCCSEEEEE
T ss_pred HHHHHHHhccCCCceeecchhhhcCChhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccCCCccccCCCCEEEEc
Confidence 999999985 3468999999999999999999999999999999999999999999999999999877777788999999
Q ss_pred ccccccceeeEEEeeCC
Q 010896 481 SFGFGGHNSVVVFAPFS 497 (498)
Q Consensus 481 s~G~gG~n~~~vl~~~~ 497 (498)
||||||+|+|+||++|.
T Consensus 420 sfGfGG~na~~vl~~~~ 436 (437)
T 2gqd_A 420 SLGFGGHNAVLVFKKFE 436 (437)
T ss_dssp EECGGGEEEEEEEECCC
T ss_pred cCcCCCeeEEEEEEecc
Confidence 99999999999999985
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-82 Score=655.53 Aligned_cols=406 Identities=32% Similarity=0.483 Sum_probs=386.2
Q ss_pred CCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCC-CCCcccccccCCCCCCCCCCccccccCCHHHHHHHHH
Q 010896 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDAS-SFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVA 163 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~-~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~a 163 (498)
+++|+|||||+++|.|.+.++||++|++|+++++++++|+.. .++.++++.|++||+.+||++++.++|||+++|++++
T Consensus 5 m~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~d~~~~l~l~a 84 (412)
T 4ewg_A 5 MKRVVITGMGGVTALGSRWDEIEAALKAGRNAVRRMPDWDYFESLHTRLAAPLPGFAQPADWPRKKTRSMGRVSMYAVRA 84 (412)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCCEECGGGGGSSSCCCCEEBCCSCCCCCTTSCHHHHTTCCHHHHHHHHH
T ss_pred CCEEEEEeeEEECCCcCCHHHHHHHHHcCCCceeeCCccccccCCccceeeecCCCChhhhCCHHHHhhCCHHHHHHHHH
Confidence 568999999999999999999999999999999999998876 6788899999999999999999999999999999999
Q ss_pred HHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCCCcc
Q 010896 164 GRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNY 243 (498)
Q Consensus 164 a~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~Gp~~ 243 (498)
+++||+|||+. ..+.++..++||++|++.+++....+++..+.+.+...++|+.++..+.+.++++|++.||++||++
T Consensus 85 a~~Al~dAGl~--~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~~ 162 (412)
T 4ewg_A 85 SELALADAGFA--GDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWDLKGRIV 162 (412)
T ss_dssp HHHHHHHHTCT--TCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHTTCCSCEE
T ss_pred HHHHHHhcCCC--CccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHhCCCCCcc
Confidence 99999999992 1245778899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeEE
Q 010896 244 SISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGI 323 (498)
Q Consensus 244 tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaaa 323 (498)
+|+++|+|++.||+.|+++|++|+||++||||+|. ++|.....|..++.++..+..|++.|||||.+++|+++||||++
T Consensus 163 ~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~-~s~~~~~~~~~~~~l~~~~~~p~~~~rpfd~~~~G~~~geGAaa 241 (412)
T 4ewg_A 163 PTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEE-LSGPAVAVFDTLYATSTRNDEPHLTPRPFDAKRDGLVVGEGAAT 241 (412)
T ss_dssp ECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHTTTCBCCCTTCGGGCCCTTBTTCCCBCBBCEEEE
T ss_pred cccchhHHHHHHHHHHHHHHHcCCCCEEEEecccc-CCHHHHHHHHHhhccccCCCCCCCCCCCCCCCCCCCceECeEEE
Confidence 99999999999999999999999999999999999 99999999999999998888899999999999999999999999
Q ss_pred EEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHH
Q 010896 324 LVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNA 403 (498)
Q Consensus 324 vvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~a 403 (498)
+|||++++|+++|++||++|+|++.++|+++++.| ++.++.++|++||++||++++||||||+|||||+.||++|..+
T Consensus 242 vvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p--~~~~~~~ai~~Al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~a 319 (412)
T 4ewg_A 242 LVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQP--TASTMARAMQLALEDAKLDANAIAYVNAHGTSTDRGDVAESQA 319 (412)
T ss_dssp EEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSSC--CHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCHHHHHHHHHH
T ss_pred EEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCCC--CHHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCccccHHHHHH
Confidence 99999999999999999999999999999988776 6888999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCC-CcCcCCCcccccCccEEEEEcc
Q 010896 404 IKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEV-TIDTVPNVKKQHHVNVAISNSF 482 (498)
Q Consensus 404 l~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~-~~~~v~~~~~~~~~~~alv~s~ 482 (498)
+.++|+. .++++++|+++||+++|||++++++++++|++++|||++|+++|||.+ ++++++.+.+..+.+++++|||
T Consensus 320 l~~~~~~--~~~v~s~K~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~~v~~~~~~~~~~~~~~~sf 397 (412)
T 4ewg_A 320 TARTFGE--RMPISSLKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLNLTEVDPACAPLDYIRGEARAIDAEYVMSNNF 397 (412)
T ss_dssp HHHHHCT--TCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTSCCCEECCSSCEECCCSEEEEEEE
T ss_pred HHHHcCC--CCeeeCccccccccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCcccccccccCcccCCCCCEEEEeee
Confidence 9999986 489999999999999999999999999999999999999999999999 8999988777788999999999
Q ss_pred ccccceeeEEEeeCC
Q 010896 483 GFGGHNSVVVFAPFS 497 (498)
Q Consensus 483 G~gG~n~~~vl~~~~ 497 (498)
||||+|+|+||++|.
T Consensus 398 gfGG~na~~vl~~~~ 412 (412)
T 4ewg_A 398 AFGGINTSLIFRRVR 412 (412)
T ss_dssp EGGGEEEEEEEECCC
T ss_pred cCCcceEEEEEeeCC
Confidence 999999999999974
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-82 Score=653.86 Aligned_cols=410 Identities=40% Similarity=0.733 Sum_probs=392.8
Q ss_pred CCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHH
Q 010896 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAG 164 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa 164 (498)
+++|+|||||+++|.|.+.++||++|++|+++++++++|+...++.++++.+++||+.+||++++.++|||+++|+++++
T Consensus 3 ~~~v~ItG~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~i~~~~~~~~d~~~~l~l~Aa 82 (413)
T 3o04_A 3 KRRVVVTGIGAVTPIGNDAETSWENAKKGVNGVAKMTRLNPDDFPVKIAAELKDFDVEKYLEKKEARKMDRFTHYAIASA 82 (413)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCGGGSSCCEEECCSSCCGGGTSCHHHHTTSCHHHHHHHHHH
T ss_pred CCCEEEEEeEEECCCCCCHHHHHHHHHcCCCceeeCCccccccCccccccccCCCChhhccCHHHHhhCCHHHHHHHHHH
Confidence 46899999999999999999999999999999999999998888889999999999999999999999999999999999
Q ss_pred HHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCCCccc
Q 010896 165 RRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYS 244 (498)
Q Consensus 165 ~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~Gp~~t 244 (498)
++||+|||+ .+++++..++||++|++.++.......+..+...+...++|+.+++...|+++++|++.||++||+++
T Consensus 83 ~~AL~dAGl---~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~~~ 159 (413)
T 3o04_A 83 EMAVQDSGL---VIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKGINST 159 (413)
T ss_dssp HHHHHHHTC---CCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHTCCSCEEC
T ss_pred HHHHHHcCC---ChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhCCCCccee
Confidence 999999999 55678889999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeEEE
Q 010896 245 ISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324 (498)
Q Consensus 245 v~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaaav 324 (498)
|+++|+|++.||+.|+++|++|+||++||||+|.+++|..+..|..++.++. ..+|++.|+|||.+++|+++||||+++
T Consensus 160 v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~~~~~~~~~~ls~-~~~p~~~~~pfd~~~~g~~~gdGAaav 238 (413)
T 3o04_A 160 TVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSL-NPDPETACRPFDKDRDGFIIGEGAGIV 238 (413)
T ss_dssp CCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC-CCCTTTSCCTTBTTCCSBCBBCEEEEE
T ss_pred ecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHHHHHHHhcccccC-CCCCCCCcCCCcCCCCCceEeccEEEE
Confidence 9999999999999999999999999999999999999999999999999985 556889999999999999999999999
Q ss_pred EEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHH
Q 010896 325 VMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAI 404 (498)
Q Consensus 325 vLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al 404 (498)
||+++++|+++|++||++|+|++.++|+++.+.|.+++.++.++++++|+++|++++||||||+|||||+.+|.+|.++|
T Consensus 239 vL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ve~HgtgT~~~d~~e~~al 318 (413)
T 3o04_A 239 ILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDKVDYINAHGTSTPYNDEYETQAI 318 (413)
T ss_dssp EEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHHHHH
T ss_pred EEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccc
Q 010896 405 KKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFG 483 (498)
Q Consensus 405 ~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G 483 (498)
.++|+. ..+++++++|+++||+++|||++++++++++|++++|||++|+++|+|.+++++++...+..+.+++++||||
T Consensus 319 ~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sfg 398 (413)
T 3o04_A 319 KTVFGEHAKKLAISSTKSMTGHTLGASGGIEAIFALLTIRDNIIAPTIHLKNQDEVCDLDYVPNEAREANVNVVISNSFG 398 (413)
T ss_dssp HHHHGGGTTTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSBCSSCCSCCCBSSCEECCCCEEEEEEEE
T ss_pred HHHhcccCCCCceecccccccccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCcccCCCcccCCCCCEEEEeCcc
Confidence 999986 3569999999999999999999999999999999999999999999999999999988777889999999999
Q ss_pred cccceeeEEEeeCCC
Q 010896 484 FGGHNSVVVFAPFSP 498 (498)
Q Consensus 484 ~gG~n~~~vl~~~~~ 498 (498)
|||+|+|+||++|..
T Consensus 399 fgG~na~~vl~~~~~ 413 (413)
T 3o04_A 399 FGGHNATLVFKRIED 413 (413)
T ss_dssp TTTEEEEEEEECCCC
T ss_pred CCceEEEEEEEeCCC
Confidence 999999999999863
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-81 Score=652.86 Aligned_cols=410 Identities=42% Similarity=0.716 Sum_probs=389.6
Q ss_pred CCCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccC-------CCCCCCCCCccccccCCHH
Q 010896 84 PKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIR-------DFSSKGYIDGKNDRRLDDC 156 (498)
Q Consensus 84 ~~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~-------~~d~~~~i~~~~~~~~d~~ 156 (498)
.+++|||||||+++|.|.++++||++|++|+++|+++++|+.+.++.+++++++ +||+.+||++++.++|||+
T Consensus 8 ~~~~~viTG~G~vsp~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~ 87 (428)
T 3kzu_A 8 HMRRVVITGLGLVSPLASGVEETWKRLLAGESGARRVTEFEVDDLACQIACRIPVGDGTNGTFNPDLHMDPKEQRKVDPF 87 (428)
T ss_dssp -CCCEEEEEEEEECSSCBSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCCBSSSSTTCBCGGGTSCHHHHTTSCHH
T ss_pred cccceEEEeceEECCCcCCHHHHHHHHHcCCCeeeeCCccccccCcCceeeEecccccccccCChhhcCCHHHHHhCCHH
Confidence 478999999999999999999999999999999999999999888888888887 7999989999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCcccccc-cCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLEN-MDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~-~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
++|+++++++||+|||++ +++ ++..++||++|++.++.....+++..+...+...++|+.+++...+..+++|++.
T Consensus 88 ~~l~l~aa~~AL~dAGl~---~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 164 (428)
T 3kzu_A 88 IVYAVGAADQALDDAGWH---PENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIK 164 (428)
T ss_dssp HHHHHHHHHHHHHHHTCC---CCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCC---hhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHHHHHH
Confidence 999999999999999994 444 6778999999999999998888888888899999999999999999999999999
Q ss_pred hcCCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccC-CCCCCCCCCcCCCCCCC
Q 010896 236 TGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQR-NEYPKRASRPWDKDRDG 314 (498)
Q Consensus 236 lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~-~~~p~~~~rpfd~~~~G 314 (498)
||++||+++|+++|+|++.||+.|+++|++|+||++||||+|..++|..+..|..++.++.. .+.|...|+|||.+++|
T Consensus 165 lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G 244 (428)
T 3kzu_A 165 HKLRGPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERNDDPTAASRPYDEDRDG 244 (428)
T ss_dssp HTCCSCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGTCCTTBTTCCS
T ss_pred cCCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCHHHHHHHHHccccccCccCCcccccCCcccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999976 45677899999999999
Q ss_pred ccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCc
Q 010896 315 FVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTL 394 (498)
Q Consensus 315 ~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~ 394 (498)
+++||||+++||+++++|+++|++||++|+|++.++|+++.+.|.+++.++.++++++|+++|++++||||||+|||||
T Consensus 245 ~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~HgtgT- 323 (428)
T 3kzu_A 245 FVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAGIVPDEIDYINAHGTST- 323 (428)
T ss_dssp BCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSS-
T ss_pred eeecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHeeEEEecCCcc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccC
Q 010896 395 AGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHH 473 (498)
Q Consensus 395 ~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~ 473 (498)
.+|.+|.+++.++|+. ..+++++++|+++||+++|+|++++++++++|++++|||++|+++|+|.+++++++...+..+
T Consensus 324 ~~d~~e~~al~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~ 403 (428)
T 3kzu_A 324 MADTIELGAVERVVGEAAAKISMSSTKSSIGHLLGAAGAAEAVFSTLAIRDNIAPATLNLDNPAAQTRIDLVPHKPRERK 403 (428)
T ss_dssp TTHHHHHHHHHHHHGGGGGGCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBSSCCSSBCCBSSCEECC
T ss_pred hhhHHHHHHHHHHhccCCCceeeCCchhhhCCCchhhHHHHHHHHHHHhccCccCCCCCCCCCCCCCCcccCCCCCcCCC
Confidence 9999999999999986 347899999999999999999999999999999999999999999999999999998888888
Q ss_pred ccEEEEEccccccceeeEEEeeCC
Q 010896 474 VNVAISNSFGFGGHNSVVVFAPFS 497 (498)
Q Consensus 474 ~~~alv~s~G~gG~n~~~vl~~~~ 497 (498)
+|++++|||||||+|+|+||++|+
T Consensus 404 ~~~a~~~sfGfgG~na~~vl~~~~ 427 (428)
T 3kzu_A 404 IDVALSNSFGFGGTNASLVLRRYT 427 (428)
T ss_dssp CSEEEEEEEETTTEEEEEEEECCC
T ss_pred CCEEEEeCcccChhhEEEEEeecC
Confidence 999999999999999999999986
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-82 Score=652.47 Aligned_cols=406 Identities=47% Similarity=0.811 Sum_probs=386.7
Q ss_pred CcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHHH
Q 010896 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGR 165 (498)
Q Consensus 86 ~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa~ 165 (498)
++|+|||||+++|+|.+.++||++|++|+++++++++|+...++.++++++ +||+.+++++++.++|||+++|++++++
T Consensus 2 ~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~~-~fd~~~~~~~~~~~~~d~~~~l~~~aa~ 80 (408)
T 1j3n_A 2 RRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEV-DVDPGAYLDRKELRRLDRFVQYALIAAQ 80 (408)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECC-CCCGGGTSCHHHHTTSCHHHHHHHHHHH
T ss_pred CCEEEEEeEEECCCCCCHHHHHHHHHcCCCeeeeccccCcccCccceEEEE-ccChhhcCCHHHHHhcCHHHHHHHHHHH
Confidence 579999999999999999999999999999999999999888888999999 8999988999999999999999999999
Q ss_pred HHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCCCcccc
Q 010896 166 RALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSI 245 (498)
Q Consensus 166 ~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~Gp~~tv 245 (498)
+||+|||+ ++++++..++||++|++.++...+...+..+..++...++|+.++..+.|.++.+|++.||++||+++|
T Consensus 81 ~AL~dAGl---~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~~~v 157 (408)
T 1j3n_A 81 LALEDAGL---KPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTV 157 (408)
T ss_dssp HHHHHHTC---CGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCBCCB
T ss_pred HHHHHcCC---CccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhCCCCceeCc
Confidence 99999999 556778889999999999998888888888888888899999999999999999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeEEEE
Q 010896 246 STACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILV 325 (498)
Q Consensus 246 ~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaaavv 325 (498)
+++|+|++.||+.|+++|++|+||++||||+|..++|..+..|..++.++.+++.|++.|||||.+++|+++|||++++|
T Consensus 158 ~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~dg~v~geGaaavv 237 (408)
T 1j3n_A 158 VTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRDGFVMGEGAGVLV 237 (408)
T ss_dssp CCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCCBCBBCEEEEEE
T ss_pred cCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhcccccCCCCCCCcCcccCcCCCCceEEeeeEEEEE
Confidence 99999999999999999999999999999999989999999999999999888888899999999999999999999999
Q ss_pred EcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHH
Q 010896 326 MESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIK 405 (498)
Q Consensus 326 Le~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~ 405 (498)
|+++++|+++|++||++|+|++.++|+++.+.|.+++.++.++|+++|+++|++++||||||+|+|||+.||++|..++.
T Consensus 238 L~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~gD~~E~~al~ 317 (408)
T 1j3n_A 238 LEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIK 317 (408)
T ss_dssp EEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHH
T ss_pred EeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHH
Confidence 99999999999999999999999999999999988999999999999999999999999999999999999999999999
Q ss_pred HHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEcccc
Q 010896 406 KVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGF 484 (498)
Q Consensus 406 ~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~ 484 (498)
++|+. ..+++++++|+++||+++|||++++++++++|++++|||++|+++|+|.+++++++ ..+.++.|++++|||||
T Consensus 318 ~~~g~~~~~~~v~s~k~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~v~-~~~~~~~~~a~~~sfGf 396 (408)
T 1j3n_A 318 RVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVP-EPREAKVDYALSNSFAF 396 (408)
T ss_dssp HHHHHHHTTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBCCS-SCEECCCSEEEEEEECT
T ss_pred HHhcCcCCCceEECchhhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccCC-CCcCCCCCEEEEecccC
Confidence 99985 34689999999999999999999999999999999999999999999999999988 55667889999999999
Q ss_pred ccceeeEEEeeC
Q 010896 485 GGHNSVVVFAPF 496 (498)
Q Consensus 485 gG~n~~~vl~~~ 496 (498)
||+|+|+||++|
T Consensus 397 GG~na~~vl~~~ 408 (408)
T 1j3n_A 397 GGHNAVLAFKRV 408 (408)
T ss_dssp TSEEEEEEEECC
T ss_pred CcceEEEEEecC
Confidence 999999999985
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-82 Score=655.87 Aligned_cols=409 Identities=30% Similarity=0.505 Sum_probs=383.1
Q ss_pred CCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCC-CCccccccCCHHHHHHHHH
Q 010896 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGY-IDGKNDRRLDDCWRYCLVA 163 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~-i~~~~~~~~d~~~~l~l~a 163 (498)
+++|+|||||+++|+|.+.++||++|++|+++++++++|+...++.++++++ +||+.+| +++++.++|||+++|++++
T Consensus 2 ~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~-~fd~~~~~i~~~~~~~~d~~~~l~l~a 80 (424)
T 1tqy_A 2 KRRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEA-DFDPVAEGFGPRELDRMDRASQFAVAC 80 (424)
T ss_dssp -CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECC-CCCHHHHTCCHHHHHHSCHHHHHHHHH
T ss_pred CCCEEEEeeEEECCCCCCHHHHHHHHHcCCCceeeCCCcccccCCcceeEEe-ccCHhhcCCCHHHHHhcCHHHHHHHHH
Confidence 3589999999999999999999999999999999999999888888888988 8999888 9999999999999999999
Q ss_pred HHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHH--HhcCCCcCCccccchhhhhhHH----HHHHhhc
Q 010896 164 GRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALI--QKGYKKITPFFIPYSITNMGSA----LLAIDTG 237 (498)
Q Consensus 164 a~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~n~~a~----~ia~~lg 237 (498)
+++||+|||+ +++.++..|+||++|++.++.....+.+..+. ..+...++++.++..+++..++ +|++.||
T Consensus 81 a~~AL~dAG~---~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ia~~lg 157 (424)
T 1tqy_A 81 AREAFAASGL---DPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVG 157 (424)
T ss_dssp HHHHHHHHTC---CTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHCCC---CchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHHHHhcC
Confidence 9999999999 45677889999999999988887777777665 4566678888888877777777 9999999
Q ss_pred CCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccc
Q 010896 238 LMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVM 317 (498)
Q Consensus 238 l~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~ 317 (498)
++||+++|+++|+|++.||+.|+++|++|+||++||||+|.+++|..+..|..+++++.++.+|++.|||||.+++|+++
T Consensus 158 l~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~ 237 (424)
T 1tqy_A 158 AEGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDDPEHASRPFDGTRDGFVL 237 (424)
T ss_dssp CCSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCSCGGGCCCTTBTTCCCBCE
T ss_pred CCCceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCCHHHHHHHHhhccccCCCCCCCCCccCCCCCCCceee
Confidence 99999999999999999999999999999999999999999889999999999999998777889999999999999999
Q ss_pred cceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCc
Q 010896 318 GEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGD 397 (498)
Q Consensus 318 gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D 397 (498)
|||++++|||++++|+++|++||++|+|++.++|+++.+.|.+++.++.++|+++|+++|++++||||||+|||||+.+|
T Consensus 238 geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~gD 317 (424)
T 1tqy_A 238 AEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDATDIDYINAHGSGTRQND 317 (424)
T ss_dssp ECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHH
T ss_pred ecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCccCcCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccE
Q 010896 398 LAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNV 476 (498)
Q Consensus 398 ~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~ 476 (498)
++|.++|.++|+. ..+++++++|+++||+++|+|++++++++++|+++.+||++|+++|+|.+++++++.+.+.++.|+
T Consensus 318 ~~E~~al~~~f~~~~~~~~v~s~k~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~ 397 (424)
T 1tqy_A 318 RHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYVPLEARERKLRS 397 (424)
T ss_dssp HHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSBBTTBCSCCCBSSCEECCCSE
T ss_pred HHHHHHHHHHhcccCCCCeeeccccccccChhhhHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCcccCCCcccCCCCCE
Confidence 9999999999986 346899999999999999999999999999999999999999999999999999998777778999
Q ss_pred EEEEccccccceeeEEEeeCC
Q 010896 477 AISNSFGFGGHNSVVVFAPFS 497 (498)
Q Consensus 477 alv~s~G~gG~n~~~vl~~~~ 497 (498)
+++|||||||+|+|+||++++
T Consensus 398 a~~~sfG~GG~n~~~vl~~~~ 418 (424)
T 1tqy_A 398 VLTVGSGFGGFQSAMVLRDAE 418 (424)
T ss_dssp EEEEEEETTTEEEEEEEECHH
T ss_pred EEEccccCCceEEEEEEccCC
Confidence 999999999999999999874
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-81 Score=653.69 Aligned_cols=408 Identities=39% Similarity=0.623 Sum_probs=383.1
Q ss_pred CCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCC------CCCCCCCCccccccCCHHHH
Q 010896 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRD------FSSKGYIDGKNDRRLDDCWR 158 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~------~d~~~~i~~~~~~~~d~~~~ 158 (498)
.++|+|||||+++|+|.+.++||++|++|+++|+++++|+...++.++++++++ ||+.+|+++++.++|||+++
T Consensus 20 ~~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~d~~~~ 99 (438)
T 2iwz_A 20 HRRVVITGIGLVTPLGVGTHLVWDRLIGGESGIVSLVGEEYKSIPCSVAAYVPRGSDEGQFNEQNFVSKSDIKSMSSPTI 99 (438)
T ss_dssp ECCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCSGGGTTSSCCEEECCCBSSSTTSBCGGGTSCHHHHTTSCHHHH
T ss_pred CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCccccCCchhcccCccceeeeeccccccccCChhhcCCHHHHHhcCHHHH
Confidence 357999999999999999999999999999999999999888888889999987 99998899999999999999
Q ss_pred HHHHHHHHHHHHCCCCcccc-cccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhc
Q 010896 159 YCLVAGRRALEEASLSPQVL-ENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTG 237 (498)
Q Consensus 159 l~l~aa~~AL~dAG~~~~~~-~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lg 237 (498)
|+++++++||+|||++ + +.++..++||++|++.++...+.+.+..+...+...++|+.+++.+.|.++.+|++.||
T Consensus 100 l~l~aa~~AL~dAGl~---~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 176 (438)
T 2iwz_A 100 MAIGAAELAMKDSGWH---PQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYK 176 (438)
T ss_dssp HHHHHHHHHHHHHTCC---CCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCC---CcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHhC
Confidence 9999999999999994 3 45667789999999999888888888888888888899999999999999999999999
Q ss_pred CCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccc
Q 010896 238 LMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVM 317 (498)
Q Consensus 238 l~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~ 317 (498)
++||+++|+++|+|++.||+.|+++|++|+||++||||+|.+++|..+..|..+++++.. ..|++.|+|||.+++|+++
T Consensus 177 l~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~-~~p~~~~~pfd~~~~G~~~ 255 (438)
T 2iwz_A 177 LKGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSTN-SDPKLACRPFHPKRDGFVM 255 (438)
T ss_dssp CCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC-SCTTTSCCTTCTTCCSBCB
T ss_pred CCCceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcCHHHHHHHHhcCCcCCC-CCCCcccccCCCCCCCEEe
Confidence 999999999999999999999999999999999999999988899999999999999864 4578999999999999999
Q ss_pred cceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCc
Q 010896 318 GEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGD 397 (498)
Q Consensus 318 gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D 397 (498)
||||+++||+++++|+++|++||++|+|++.++|+++++.|.+++.++.++|+++|+++|++|+||||||+|+|||+.+|
T Consensus 256 geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~gD 335 (438)
T 2iwz_A 256 GEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISYINAHATSTPLGD 335 (438)
T ss_dssp BCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHH
T ss_pred eceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCCCCcccC
Confidence 99999999999999999999999999999999999999999889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccC---
Q 010896 398 LAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHH--- 473 (498)
Q Consensus 398 ~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~--- 473 (498)
++|.++|.++|+. ..+++++++|+++||+++|||++++++++++|+++.|||++|+++|+|.+++++++...++++
T Consensus 336 ~~E~~al~~~fg~~~~~~~v~s~K~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~ 415 (438)
T 2iwz_A 336 AAENKAIKHLFKDHAYALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLNYVPLKAQEWKTEK 415 (438)
T ss_dssp HHHHHHHHHHHGGGGGTSEEECCHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSCCCTTCCSBCCBSSCEECCCSS
T ss_pred HHHHHHHHHHHhccCCCcceecchhhhcCCHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccccCCCcccCCCCC
Confidence 9999999999985 346899999999999999999999999999999999999999999999999999987666665
Q ss_pred ccEEEEEccccccceeeEEEeeC
Q 010896 474 VNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 474 ~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
+|++++|||||||+|+|+||+++
T Consensus 416 ~~~a~~~sfGfGG~na~~vl~~~ 438 (438)
T 2iwz_A 416 RFIGLTNSFGFGGTNATLCIAGL 438 (438)
T ss_dssp SCEEEEEEEETTTEEEEEEEECC
T ss_pred ccEEEEecCcCCCeeEEEEEeeC
Confidence 89999999999999999999985
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-81 Score=648.95 Aligned_cols=406 Identities=29% Similarity=0.431 Sum_probs=381.7
Q ss_pred CCCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHH
Q 010896 84 PKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVA 163 (498)
Q Consensus 84 ~~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~a 163 (498)
..++|+|||||+++|+|.+.++||++|++|+++++++++|+...++.+++++|++||+.+|+++++.++|||+++|++++
T Consensus 7 ~~~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~d~~~~l~l~a 86 (415)
T 1tqy_B 7 DDKSVLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHAPDHIPGRLLPQTDPSTRLALTA 86 (415)
T ss_dssp ---CEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECTTTTGGGSSCCEEECCCSCCHHHHSCTTTGGGCCHHHHHHHHH
T ss_pred CCCCEEEEeeEEECCCCCCHHHHHHHHHcCCCcEEECCcccccCCCcceEEEeCCCCchhcCCHHHHHhcCHHHHHHHHH
Confidence 45689999999999999999999999999999999999999888888999999999998889999999999999999999
Q ss_pred HHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCCCcc
Q 010896 164 GRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNY 243 (498)
Q Consensus 164 a~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~Gp~~ 243 (498)
+++||+|||+ .+++++..++||++|++.+++....+++..+...+...++|+.+++...+.++++|++.||++||++
T Consensus 87 a~~AL~dAGl---~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~~ 163 (415)
T 1tqy_B 87 ADWALQDAKA---DPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSS 163 (415)
T ss_dssp HHHHHHHTTC---CGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTCCSSCE
T ss_pred HHHHHHHcCC---CccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhCCCCceE
Confidence 9999999999 4567788999999999999999888888888888888999999999999999999999999999999
Q ss_pred ccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeEE
Q 010896 244 SISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGI 323 (498)
Q Consensus 244 tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaaa 323 (498)
+|+++|+|++.||+.|+++|++| ||++||||+|..+++..+..|..+++|+. ++.|++.|+|||.+++|+++|||+++
T Consensus 164 ~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~~~~~~~~~ls~-~~~~~~~~~pfd~~~~G~~~geGaaa 241 (415)
T 1tqy_B 164 ALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRIST-ATDPDRAYLPFDERAAGYVPGEGGAI 241 (415)
T ss_dssp EEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCC-CSCGGGSCCTTSTTCCCBCBBCEEEE
T ss_pred eecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHHHHHHhccCccC-CCCCCCCcCCCCCCCCCcceeeeEEE
Confidence 99999999999999999999999 99999999999899999999999999986 55577899999999999999999999
Q ss_pred EEEcchHHHHhcCC-cEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHH
Q 010896 324 LVMESLEHAMKRGA-NIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVN 402 (498)
Q Consensus 324 vvLe~~~~A~~~g~-~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~ 402 (498)
+||+++++|+++|+ +||++|+|++.++|+++++.|++ ++.++|+++|+++|++++||||||+|||||+++|.+|..
T Consensus 242 vvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~~---~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~ 318 (415)
T 1tqy_B 242 LVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPA---GLERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAEAR 318 (415)
T ss_dssp EEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCC---SHHHHHHHHHHHHTCCGGGCCEEECCCCCSHHHHHHHHH
T ss_pred EEECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCCH---HHHHHHHHHHHHcCCCHhHCCEEEEeCCCCcCcCHHHHH
Confidence 99999999999999 99999999999999999888776 678999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEcc
Q 010896 403 AIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSF 482 (498)
Q Consensus 403 al~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~ 482 (498)
++.++|+. ..+++++.|+++||+++|||++++++++++|+++.|||++|+++|+|.+++++++.+.+.++.|++++|||
T Consensus 319 al~~~~g~-~~~~v~s~K~~~GH~~gAaG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sf 397 (415)
T 1tqy_B 319 AIGRVFGR-EGVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGIDLVLGEPRSTAPRTALVLAR 397 (415)
T ss_dssp HHHHHHCT-TCSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCGGGCCEECBSSCBCCCCSEEEEEEE
T ss_pred HHHHHhCC-CCceEeccchhhccChHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccCCCCccCCCCEEEEecC
Confidence 99999976 35899999999999999999999999999999999999999999999999998887777778899999999
Q ss_pred ccccceeeEEEeeCCC
Q 010896 483 GFGGHNSVVVFAPFSP 498 (498)
Q Consensus 483 G~gG~n~~~vl~~~~~ 498 (498)
||||+|+|+||++++|
T Consensus 398 GfgG~n~~~vl~~~~~ 413 (415)
T 1tqy_B 398 GRWGFNSAAVLRRFAP 413 (415)
T ss_dssp ETTTEEEEEEEEEC--
T ss_pred cCCCeEEEEEEecCCC
Confidence 9999999999999865
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-81 Score=648.17 Aligned_cols=415 Identities=43% Similarity=0.670 Sum_probs=389.5
Q ss_pred CCCCCCCCCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHH
Q 010896 78 PKREKDPKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCW 157 (498)
Q Consensus 78 ~~~~~~~~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~ 157 (498)
|+..+-.+++|+|||||+++|.|.+.++||++|++|+++++++++|+...++.++++++++||+.+++++++.++|||++
T Consensus 15 ~~~~~m~m~~v~ItG~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~d~~~ 94 (430)
T 1ox0_A 15 PRGSHMKLNRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFDHSDFDVHNAAEIQDFPFDKYFVKKDTNRFDNYS 94 (430)
T ss_dssp CCCSSCCCCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECCSSCCHHHHCCGGGGGTCCHHH
T ss_pred CCcccccCCCEEEEEEEEECCCcCCHHHHHHHHHcCCCeeeeCCcccccCCccceeeeccCCChhhcCCHHHHHhcCHHH
Confidence 33444335789999999999999999999999999999999999999888888999999999998889999999999999
Q ss_pred HHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhc
Q 010896 158 RYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTG 237 (498)
Q Consensus 158 ~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lg 237 (498)
+|+++++++||+|||+ +++.++..++||++|++.++.....+.+..+..++...++|+.+++.+.|.++++|++.||
T Consensus 95 ~l~l~aa~~AL~dAG~---~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 171 (430)
T 1ox0_A 95 LYALYAAQEAVNHANL---DVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFG 171 (430)
T ss_dssp HHHHHHHHHHHHHTTC---CTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCC---ChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhc
Confidence 9999999999999999 4567788999999999999888888888888888888999999999999999999999999
Q ss_pred CCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccc
Q 010896 238 LMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVM 317 (498)
Q Consensus 238 l~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~ 317 (498)
++||+++|+++|+|++.||+.|+++|++|+||++||||+|..++|..+..|..+++++. ++.|++.|+|||.+++|+++
T Consensus 172 l~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~-~~~p~~~~~pFd~~~~g~~~ 250 (430)
T 1ox0_A 172 ANGVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALST-TEDPTRASIPFDKDRNGFVM 250 (430)
T ss_dssp CCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC-CSSTTSSSCTTBTTCCSBCB
T ss_pred CCCceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhCCCccC-CCCCCCCCCCCCCCCCCccc
Confidence 99999999999999999999999999999999999999999889999999999999885 45688999999999999999
Q ss_pred cceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCc
Q 010896 318 GEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGD 397 (498)
Q Consensus 318 gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D 397 (498)
||||+++||+++++|+++|++||++|+|++.++|+++.+.|.+++.++.++|+++|+++|++++||||||+|+|||+.+|
T Consensus 251 geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D 330 (430)
T 1ox0_A 251 GEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANE 330 (430)
T ss_dssp CCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHH
T ss_pred cceEEEEEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhCcCHHHcCEEEEeCCcCcccC
Confidence 99999999999999999999999999999999999999989888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEE
Q 010896 398 LAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVA 477 (498)
Q Consensus 398 ~~E~~al~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~a 477 (498)
++|..++.++|+. +++++++|+++||+++|+|++++++++++|++++|||++|+++|+|.+++++++...+..+.|++
T Consensus 331 ~~E~~al~~~~g~--~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a 408 (430)
T 1ox0_A 331 KGESGAIVAVLGK--EVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVYGQGLEKEIPYA 408 (430)
T ss_dssp HHHHHHHHHHHCS--SSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSEECBSSCEECCCSEE
T ss_pred HHHHHHHHHHhCC--CceecccccccccchhhHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCCCCcCCCCCEE
Confidence 9999999999986 68999999999999999999999999999999999999999999999999988877767788999
Q ss_pred EEEccccccceeeEEEeeCCC
Q 010896 478 ISNSFGFGGHNSVVVFAPFSP 498 (498)
Q Consensus 478 lv~s~G~gG~n~~~vl~~~~~ 498 (498)
++|||||||+|+|+||++|.+
T Consensus 409 ~~~sfGfGG~na~~vl~~~~~ 429 (430)
T 1ox0_A 409 ISNTFGFGGHNAVLAFKRWEN 429 (430)
T ss_dssp EEEEEETTTEEEEEEEECCC-
T ss_pred EEeCccCCCceEEEEEeecCC
Confidence 999999999999999999853
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-80 Score=642.98 Aligned_cols=405 Identities=34% Similarity=0.574 Sum_probs=381.8
Q ss_pred CCCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCC--CCCCCcccccccCCCCCCCCCCccccccCCHHHHHHH
Q 010896 84 PKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFD--ASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCL 161 (498)
Q Consensus 84 ~~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~--~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l 161 (498)
..++|+|||||+++|+|.+.++||++|++|+++++++++|+ ...++.+++|++++ |+.+|+++++.++|||+++|++
T Consensus 10 ~~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~d~~~~l~l 88 (416)
T 2wge_A 10 GFPSVVVTAVTATTSISPDIESTWKGLLAGESGIHALEDEFVTKWDLAVKIGGHLKD-PVDSHMGRLDMRRMSYVQRMGK 88 (416)
T ss_dssp SSCCEEEEEEEEEESSCSSHHHHHHHHHTTCCCCEECCCHHHHHHTCSCCEEBCCSS-CGGGGCCHHHHHHSCHHHHHHH
T ss_pred CCCcEEEEeeEEECCCCCCHHHHHHHHHcCCCEEEeCCccccccccCCccEEEEeCC-chhhhCCHHHHHhcCHHHHHHH
Confidence 35689999999999999999999999999999999999887 55677789999988 8888899999999999999999
Q ss_pred HHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCCC
Q 010896 162 VAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGP 241 (498)
Q Consensus 162 ~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~Gp 241 (498)
+++++||+|||+ +.++..++|||+|++.+++....+++..+...+...++|+.+++.+.+..+++|++.||++||
T Consensus 89 ~aa~~AL~dAG~-----~~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp 163 (416)
T 2wge_A 89 LLGGQLWESAGS-----PEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGARAG 163 (416)
T ss_dssp HHHHHHHHHTTC-----CCCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSC
T ss_pred HHHHHHHHHcCC-----CccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhccCCC
Confidence 999999999998 346778999999999999888888888888888888999999999999999999999999999
Q ss_pred ccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCcccccee
Q 010896 242 NYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGC 321 (498)
Q Consensus 242 ~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGa 321 (498)
+++|+++|+|++.||+.|+++|++|+||++||||+|.+..+..+..|..++.++.++..|+..|+|||.+++|+++|||+
T Consensus 164 ~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~pfd~~~dg~v~geGa 243 (416)
T 2wge_A 164 VMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPFDKDRDGFVFGEAG 243 (416)
T ss_dssp EECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHHHHHHHTTTCBCCCTTSGGGSCCTTBTTCCCBCBBCEE
T ss_pred cccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHHHHHHHhcchhhccccCCcccccccccCCCCccccCce
Confidence 99999999999999999999999999999999999998888889999999999988888899999999999999999999
Q ss_pred EEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHH
Q 010896 322 GILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEV 401 (498)
Q Consensus 322 aavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~ 401 (498)
+++||+++++|+++|++||++|+|++.++|+++++.|.+++.++.++++++|+++|++++||||||+|||||+.||++|.
T Consensus 244 aavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~HgtgT~~gD~~E~ 323 (416)
T 2wge_A 244 ALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDHVNAHGTATPIGDAAEA 323 (416)
T ss_dssp EEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHH
T ss_pred EEEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEECCCCCcCCCHHHH
Confidence 99999999999999999999999999999999988888889999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEc
Q 010896 402 NAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNS 481 (498)
Q Consensus 402 ~al~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s 481 (498)
.++..+ +. .++++++.|+++||+++|+|++++++++++|++++|||++|+++|||.+++++++.+.+..++|++++||
T Consensus 324 ~al~~~-~~-~~~~v~s~k~~~GH~~gAsG~~~~i~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~s 401 (416)
T 2wge_A 324 NAIRVA-GC-DQAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDLDVVAGEPRYGDYRYAVNNS 401 (416)
T ss_dssp HHHHHT-TC-TTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTTCCEECCSSCEECCCCEEEEEE
T ss_pred HHHHHh-cc-CCCCccCCcccccCcHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcccCCCCCccCCCCEEEEeC
Confidence 999988 43 3689999999999999999999999999999999999999999999999999998777677889999999
Q ss_pred cccccceeeEEEeeC
Q 010896 482 FGFGGHNSVVVFAPF 496 (498)
Q Consensus 482 ~G~gG~n~~~vl~~~ 496 (498)
|||||+|+|+||++|
T Consensus 402 fGfGG~na~~vl~~~ 416 (416)
T 2wge_A 402 FGFGGHNVALAFGRY 416 (416)
T ss_dssp EETTTEEEEEEEECC
T ss_pred cccCceeEEEEEEeC
Confidence 999999999999986
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-80 Score=642.90 Aligned_cols=405 Identities=33% Similarity=0.556 Sum_probs=382.3
Q ss_pred CCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCC--CCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHH
Q 010896 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFD--ASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLV 162 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~--~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~ 162 (498)
.++|+|||||+++|+|.+.++||++|++|+++++++++|+ ...++.+++|++++ |+.+|+++++.++|||+++|+++
T Consensus 27 ~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~v~~-d~~~~~~~~~~~~~d~~~~l~l~ 105 (434)
T 2gp6_A 27 FPYVVVTGIAMTTALATDAETTWKLLLDRQSGIRTLDDPFVEEFDLPVRIGGHLLE-EFDHQLTRIELRRMGYLQRMSTV 105 (434)
T ss_dssp SCCEEEEEEEEECSSCSSHHHHHHHHHTTCCCEEECCCHHHHHHCCSCCEEECCSC-CSTTSSCHHHHHTCCHHHHHHHH
T ss_pred CCCEEEEeeEEeCCCCCCHHHHHHHHHcCCCeeeeCCccccccccCccceeEEcCC-chhhhCCHHHHHhCCHHHHHHHH
Confidence 4689999999999999999999999999999999999887 55677788999987 88888999999999999999999
Q ss_pred HHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCCCc
Q 010896 163 AGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPN 242 (498)
Q Consensus 163 aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~Gp~ 242 (498)
++++||+|||+ +.++..++||++|++.+++......+..+..++...++|+.+++.+.|..+++|++.||++||+
T Consensus 106 aa~~ALedAG~-----~~~~~~~igv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl~Gp~ 180 (434)
T 2gp6_A 106 LSRRLWENAGS-----PEVDTNRLMVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAKAGV 180 (434)
T ss_dssp HHHHHHHHTTC-----CCCCTTSEEEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCCCSCE
T ss_pred HHHHHHHhcCC-----CccCCCceEEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcCCCCe
Confidence 99999999998 3467789999999999998888888888777788889999999999999999999999999999
Q ss_pred cccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhcc-ccccCCCCCCCCCCcCCCCCCCcccccee
Q 010896 243 YSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACR-ALSQRNEYPKRASRPWDKDRDGFVMGEGC 321 (498)
Q Consensus 243 ~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~-~ls~~~~~p~~~~rpfd~~~~G~v~gEGa 321 (498)
++|+++|+|++.||+.|+++|++|+||++||||+|....|..+..|..++ .++.++..|++.|+|||.+++|+++|||+
T Consensus 181 ~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~~g~v~gdGA 260 (434)
T 2gp6_A 181 MTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDRDRDGFVFGEGG 260 (434)
T ss_dssp ECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHHHHHHHTTTSSCCCCTTCTTTSCCSSBTTCCCCCBBCCE
T ss_pred EEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHHHHHhcCCCCCCCCceecccccCCCcceecce
Confidence 99999999999999999999999999999999999989999999999999 88877777899999999999999999999
Q ss_pred EEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHH
Q 010896 322 GILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEV 401 (498)
Q Consensus 322 aavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~ 401 (498)
+++||+++++|+++|++||++|+|++.++|+++++.|.+++.++.++++++|+++|++++||||||+|||||+.+|.+|.
T Consensus 261 aavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~ 340 (434)
T 2gp6_A 261 ALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDIDHVNAHATGTQVGDLAEG 340 (434)
T ss_dssp EEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHTTCCTTTEEEEECCCCSCHHHHHHHH
T ss_pred EEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCccchHHHH
Confidence 99999999999999999999999999999999998898889999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEc
Q 010896 402 NAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNS 481 (498)
Q Consensus 402 ~al~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s 481 (498)
++|.++|+.. +++++++|+++||+++|+|++++++++++|+++.+||++|+++|+|.+++++++.+.+..+.|++++||
T Consensus 341 ~al~~~fg~~-~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~s 419 (434)
T 2gp6_A 341 RAINNALGGN-RPAVYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDLDVVAGEPRPGNYRYAINNS 419 (434)
T ss_dssp HHHHHHHTTC-CCEECCTHHHHCBCTTTHHHHHHHHHHHHHHHSCCCCCSSCSSBCTTCCCEECCSSCCCSCCCEEEEEE
T ss_pred HHHHHHhccC-CCCcccchhhhcCchhhhHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccccCCCccCCCCCEEEEeC
Confidence 9999999864 799999999999999999999999999999999999999999999999999998777777889999999
Q ss_pred cccccceeeEEEeeC
Q 010896 482 FGFGGHNSVVVFAPF 496 (498)
Q Consensus 482 ~G~gG~n~~~vl~~~ 496 (498)
|||||+|+|+||++|
T Consensus 420 fGfGG~na~~vl~~~ 434 (434)
T 2gp6_A 420 FGFGGHNVAIAFGRY 434 (434)
T ss_dssp EETTTEEEEEEEECC
T ss_pred CcCCCeeEEEEEEeC
Confidence 999999999999986
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-81 Score=646.56 Aligned_cols=401 Identities=36% Similarity=0.603 Sum_probs=369.4
Q ss_pred CcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHHH
Q 010896 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGR 165 (498)
Q Consensus 86 ~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa~ 165 (498)
++|+|||||+++|+|.+.++||++|++|+++++++++|+...++.+++++|+ ||+.+|+++++.++|||+++|++++++
T Consensus 2 ~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~v~-fd~~~~~~~~~~~~~d~~~~l~l~aa~ 80 (406)
T 2vba_A 2 KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVK-LDTTGLIDRKVVRFMSDASIYAFLSME 80 (406)
T ss_dssp CCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHHHHHTTCSCCEEECCC-CCCTTSSCHHHHTTCCHHHHHHHHHHH
T ss_pred CCEEEEeeEEECCCCCCHHHHHHHHHcCCCeEEeCCcccccCCccceEEEec-CChhhcCCHHHHHhcCHHHHHHHHHHH
Confidence 5799999999999999999999999999999999998887778888999998 999989999999999999999999999
Q ss_pred HHHHHCCCCcccccccCC-ceeEEEEeccCCCchhhHHHHHHHH-HhcCCCcCCccccchhhhhhHHHHHHhhcCCCCcc
Q 010896 166 RALEEASLSPQVLENMDR-TRIGVVVGSGMGGLTSFTTGVEALI-QKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNY 243 (498)
Q Consensus 166 ~AL~dAG~~~~~~~~~~~-~~~gv~vGs~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~Gp~~ 243 (498)
+||+|||+ +++.++. .|+||++|++.++.....+++..+. ..+...++|+.+++.+.+.++++|++.||++||++
T Consensus 81 ~Al~dAg~---~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~Gp~~ 157 (406)
T 2vba_A 81 QAIADAGL---SPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNY 157 (406)
T ss_dssp HHHHHHTC---CHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTTTCCSCEE
T ss_pred HHHHHCCC---ChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHhccCCCcee
Confidence 99999999 4456676 8999999999998887777776665 44555678888888899999999999999999999
Q ss_pred ccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhcccccc-CCCCCCCCCCcCCCCCCCccccceeE
Q 010896 244 SISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQ-RNEYPKRASRPWDKDRDGFVMGEGCG 322 (498)
Q Consensus 244 tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~-~~~~p~~~~rpfd~~~~G~v~gEGaa 322 (498)
+|+++|+|++.||+.|+++|++|+||++||||+|.++.|..+. |..+++++. +++.|++.|||||.+++|+++|||++
T Consensus 158 ~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~-~~~~~~ls~~~~~~p~~~~~pfd~~~~G~v~gEGaa 236 (406)
T 2vba_A 158 SISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACE-FDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGG 236 (406)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHH-HHHTTCBCCSCTTSGGGSCCTTBTTCCSBCBBCEEE
T ss_pred eeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccChHHHH-HhhccccccccCCCCccccCcCcCCCCceEeeceEE
Confidence 9999999999999999999999999999999999988887777 999999986 34557899999999999999999999
Q ss_pred EEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHH
Q 010896 323 ILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVN 402 (498)
Q Consensus 323 avvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~ 402 (498)
++|||++++|+++|++||++|+|++.++|+++++.|+ +.++.++|++||+++| +||||||+|||||+.+|++|.+
T Consensus 237 avvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~t~p~--~~~~~~ai~~al~~ag---~dId~ve~HgtgT~~gD~~E~~ 311 (406)
T 2vba_A 237 MVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPS--GEGAVRCMKMAMHGVD---TPIDYLNSHGTSTPVGDVKELA 311 (406)
T ss_dssp EEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCTTSCC--SHHHHHHHHHHHTTCC---SCCCEEECCCCSCHHHHHHHHH
T ss_pred EEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCC--HHHHHHHHHHHHhhCC---CCccEEEeeCccCcccCHHHHH
Confidence 9999999999999999999999999999999877654 7888999999999999 8999999999999999999999
Q ss_pred HHHHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCC-cCcCCCcccccCccEEEEEc
Q 010896 403 AIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVT-IDTVPNVKKQHHVNVAISNS 481 (498)
Q Consensus 403 al~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~-~~~v~~~~~~~~~~~alv~s 481 (498)
+|.++|+.. .++++++|+++||+++|||++++++++++|+++.|||++|+++|+|.++ +++++...+. ++|++++||
T Consensus 312 al~~~fg~~-~~~v~s~K~~~GH~~gAaG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~v~~~~~~-~~~~a~~~s 389 (406)
T 2vba_A 312 AIREVFGDK-SPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTDR-ELTTVMSNS 389 (406)
T ss_dssp HHHHHHTTC-CCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCTTSEECCSCEEC-CCCEEEEEE
T ss_pred HHHHHhCcC-CCceeCchhhhcccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCccccccCCcccCC-CCCEEEEcC
Confidence 999999863 4889999999999999999999999999999999999999999999998 8888766554 789999999
Q ss_pred cccccceeeEEEeeCCC
Q 010896 482 FGFGGHNSVVVFAPFSP 498 (498)
Q Consensus 482 ~G~gG~n~~~vl~~~~~ 498 (498)
|||||+|+|+||++|++
T Consensus 390 fGfgG~na~~vl~~~~~ 406 (406)
T 2vba_A 390 FGFGGTNATLVMRKLKD 406 (406)
T ss_dssp EETTTEEEEEEEECC--
T ss_pred CCCCCeEEEEEEEeCCC
Confidence 99999999999999864
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-80 Score=649.61 Aligned_cols=412 Identities=40% Similarity=0.632 Sum_probs=389.6
Q ss_pred CCCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccC--------CCCCCCCCCccccccCCH
Q 010896 84 PKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIR--------DFSSKGYIDGKNDRRLDD 155 (498)
Q Consensus 84 ~~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~--------~~d~~~~i~~~~~~~~d~ 155 (498)
|+++|+|||||+++|+|.+.++||++|++|+++++++++|+...++.+++|+++ +||+.+||++++.+.|||
T Consensus 22 m~~~v~ItG~g~~~P~g~~~~~~w~~l~~g~s~i~~~~~~~~~~~~~~~~g~v~~~~~~~~~~fd~~~~i~~~~~~~~d~ 101 (451)
T 4ddo_A 22 MTLRVVVTGIGIVSPLGCGKELVWQRLIGGGSGLRRLGDDIAGELSAKVGGTVQDVAEDPEGGFDPERSVPHKELRKMDR 101 (451)
T ss_dssp --CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCHHHHTTSSCCEEECCCCTTTCTTTCCCGGGTSCHHHHTTSCH
T ss_pred CCCCEEEEEeEEECCCCCCHHHHHHHHHcCCCeeeeCCccccccccCccceEccccccccccccchhhhCCHHHHhhCCH
Confidence 457899999999999999999999999999999999999988888888999987 799998899999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCccccccc-CCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHH
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENM-DRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAI 234 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~-~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~ 234 (498)
+++|+++++++||+|||++ ++++ +..++||++|++.++......++..+...+...++|+.+++...|..+++|++
T Consensus 102 ~~~L~l~Aa~~AL~dAGl~---~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 178 (451)
T 4ddo_A 102 FIQMAMVAADEALAEAGWA---PEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISI 178 (451)
T ss_dssp HHHHHHHHHHHHHHHHTCC---CCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCC---hhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHH
Confidence 9999999999999999994 4556 77899999999999999999999888888888999999999999999999999
Q ss_pred hhcCCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccC-CCCCCCCCCcCCCCCC
Q 010896 235 DTGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQR-NEYPKRASRPWDKDRD 313 (498)
Q Consensus 235 ~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~-~~~p~~~~rpfd~~~~ 313 (498)
.||++||+++|+++|+|++.||+.|+++|++|+||++||||+|..+.|..+..|...++++.. ++.|.+.|+|||.+++
T Consensus 179 ~lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~ 258 (451)
T 4ddo_A 179 KHRFRGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEPVRASRPFDRDRD 258 (451)
T ss_dssp HHTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGSCCTTBTTCC
T ss_pred HhcCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHHHHHHHHHHhhhccCCCcCccccccccccCCC
Confidence 999999999999999999999999999999999999999999999999999999999999875 5667789999999999
Q ss_pred CccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCC
Q 010896 314 GFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATST 393 (498)
Q Consensus 314 G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt 393 (498)
|+++||||+++||+++++|+++|++||++|+|++.++|+.+++.|.+++.++.++++++|+++|++++||||||+|||||
T Consensus 259 g~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt 338 (451)
T 4ddo_A 259 GFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQVDYVNAHATST 338 (451)
T ss_dssp SBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSC
T ss_pred CcEEeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCCcC
Confidence 99999999999999999999999999999999999999999999988999999999999999999999999999999999
Q ss_pred ccCcHHHHHHHHHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCC-CcCcCCCccccc
Q 010896 394 LAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEV-TIDTVPNVKKQH 472 (498)
Q Consensus 394 ~~~D~~E~~al~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~-~~~~v~~~~~~~ 472 (498)
+++|.+|..++.++|+...+++++++|+++||++||||++++++++++|++++|||++|+++|+|.+ ++++++...+..
T Consensus 339 ~~~d~~E~~al~~~~~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~ 418 (451)
T 4ddo_A 339 PVGDAGEIEALKTVFGVGAGPAISSTKSATGHLLGAAGAIEAAFSILALRDGVLPGTLNLEHPDPAADGLDLIGPAARHV 418 (451)
T ss_dssp HHHHHHHHHHHHHHHCSSSSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTTSEECCSSCEEC
T ss_pred cccCHHHHHHHHHHhCCCCCCcccCchhhhccCHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCcccccccccCCCCCCC
Confidence 9999999999999998756799999999999999999999999999999999999999999999999 788888877778
Q ss_pred CccEEEEEccccccceeeEEEeeCCC
Q 010896 473 HVNVAISNSFGFGGHNSVVVFAPFSP 498 (498)
Q Consensus 473 ~~~~alv~s~G~gG~n~~~vl~~~~~ 498 (498)
+.+++++|||||||+|+|+||++|++
T Consensus 419 ~~~~a~~~sfgfgG~na~~vl~~~~~ 444 (451)
T 4ddo_A 419 PVEIALSNGFGFGGVNASVLFRRYPS 444 (451)
T ss_dssp CCSEEEEEEEETTTEEEEEEEEESCC
T ss_pred CcCEEEEeeEcCCCceEEEEEeeCCC
Confidence 89999999999999999999999864
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-80 Score=645.54 Aligned_cols=403 Identities=35% Similarity=0.568 Sum_probs=374.4
Q ss_pred CCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHH
Q 010896 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAG 164 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa 164 (498)
+++|+|||||+++|+|.+.++||++|++|+++++++++|+...++.+++|+ .+||+.+||++++.++|||+++|+++++
T Consensus 22 m~~V~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~g~-~~fd~~~~i~~~~~~~~d~~~~l~~~aa 100 (428)
T 3mqd_A 22 MRRVVVTGMGIVSSIGSNTEEVTASLREAKSGISRAEEYAELGFRCQVHGA-PDIDIESLVDRRAMRFHGRGTAWNHIAM 100 (428)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHHHHHTTCSCCEEEC-CCCCHHHHSCTGGGTTCCHHHHHHHHHH
T ss_pred CCCEEEEeeEEECCCcCCHHHHHHHHHcCCCcceeCCcccccCCCcccccc-cCCChhhcCCHHHHhhCCHHHHHHHHHH
Confidence 478999999999999999999999999999999999988877888888888 4799988899999999999999999999
Q ss_pred HHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCCCccc
Q 010896 165 RRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYS 244 (498)
Q Consensus 165 ~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~Gp~~t 244 (498)
++||+|||+ .++.++..++||++|++.++.....+++..+.+.+...++|+.+++.+.+.++.+|++.||++||+++
T Consensus 101 ~~Al~dAGl---~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~~t 177 (428)
T 3mqd_A 101 DQAIADAGL---TEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIKGINYS 177 (428)
T ss_dssp HHHHHHHTC---CHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTTCCSCEEC
T ss_pred HHHHHHcCC---ChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcCCCCceee
Confidence 999999999 55677889999999999888877788888888888999999999999999999999999999999999
Q ss_pred cccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccC-CCCCCCCCCcCCCCCCCccccceeEE
Q 010896 245 ISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQR-NEYPKRASRPWDKDRDGFVMGEGCGI 323 (498)
Q Consensus 245 v~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~-~~~p~~~~rpfd~~~~G~v~gEGaaa 323 (498)
|+++|+||++||++|+++|++|+||++||||+|. +++.....|..++.++.. ...|++.|||||.+++|+++||||++
T Consensus 178 v~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~-~s~~~~~~~~~~~~ls~~~~~~p~~~~rpfd~~~~G~v~gEGAaa 256 (428)
T 3mqd_A 178 ISSACATSNHCIGNAYEMIQYGKQDRMFAGGCED-LDWTLSVLFDAMGAMSSKYNDTPSTASRAYDKNRDGFVIAGGAGV 256 (428)
T ss_dssp CCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHTTCBCCTTTTSGGGSCCTTBTTCCSBCBBCEEEE
T ss_pred ecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecc-cchHHHHHHHHhhhhcccccCCcccccCcccCCCCCcccccceEE
Confidence 9999999999999999999999999999999998 566666779999999875 56688999999999999999999999
Q ss_pred EEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHH
Q 010896 324 LVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNA 403 (498)
Q Consensus 324 vvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~a 403 (498)
+||+++++|+++|++||++|+|++.++|+++++.| ++.++.++|++||+ |++ +||||||+|||||+.||++|..+
T Consensus 257 vvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~P--~~~~~~~ai~~Al~--gl~-~dId~ve~HgtgT~~~D~~E~~a 331 (428)
T 3mqd_A 257 LVLEDLETALARGAKIYGEIVGYGATSDGYDMVAP--SGEGAIRCMKMALS--TVT-SKIDYINPHATSTPAGDAPEIEA 331 (428)
T ss_dssp EEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSC--CSHHHHHHHHHHHT--TCC-SCCCEEECCCCSCHHHHHHHHHH
T ss_pred EEEccHHHHHhCCCcEEEEEEEEEEcCCCCCCCCC--CHHHHHHHHHHHHh--CCc-cccCEEEEeCCCCCCcCHHHHHH
Confidence 99999999999999999999999999999987766 67888999999999 999 99999999999999999999999
Q ss_pred HHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCC-cCcCCCcccccCccEEEEEc
Q 010896 404 IKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVT-IDTVPNVKKQHHVNVAISNS 481 (498)
Q Consensus 404 l~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~-~~~v~~~~~~~~~~~alv~s 481 (498)
|.++|+. ...++++++|+++||++||||++++++++++|++++|||++|+++|||.++ +++++...+..+++++++||
T Consensus 332 l~~~~~~~~~~~~v~s~K~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~s 411 (428)
T 3mqd_A 332 IRQIFGAGDVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFICESAHIEELDPAFADMPIVRKRIDNVQLNTVLSNS 411 (428)
T ss_dssp HHHHHCSGGGSCCBCCTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTTSCBCSSCEESCCCCEEEEEE
T ss_pred HHHHhcccCCCceeecchhhhcccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCcccccCCccCCccccCCCCEEEEec
Confidence 9999984 234799999999999999999999999999999999999999999999997 77777665556789999999
Q ss_pred cccccceeeEEEeeCC
Q 010896 482 FGFGGHNSVVVFAPFS 497 (498)
Q Consensus 482 ~G~gG~n~~~vl~~~~ 497 (498)
|||||+|+|+||++|+
T Consensus 412 fGfGG~Na~~vl~~~~ 427 (428)
T 3mqd_A 412 FGFGGTNATLVFQRYQ 427 (428)
T ss_dssp EETTTEEEEEEEECCC
T ss_pred CcCCcceEEEEEeecC
Confidence 9999999999999985
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-79 Score=636.37 Aligned_cols=405 Identities=39% Similarity=0.674 Sum_probs=374.5
Q ss_pred CcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCC--------------CCCCcccccccC------CCCCCCCC
Q 010896 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDA--------------SSFSVRFGGQIR------DFSSKGYI 145 (498)
Q Consensus 86 ~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~--------------~~~~~~~~g~i~------~~d~~~~i 145 (498)
++|+|||||+++|+|.++++||++|++|+++++++++|+. ..++.+++++|+ +||+.+|+
T Consensus 1 ~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~fd~~~~~ 80 (431)
T 2ix4_A 1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDEALWL 80 (431)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCGGGGCCTTSCHHHHHHHHHTCSCCEEECCCBSSSTTSBCHHHHS
T ss_pred CcEEEEeeeEECCCCCCHHHHHHHHHcCCCeeeeCChhhhhccccccccccccccCcccceeEEeccccccccCChhhcC
Confidence 3799999999999999999999999999999999998872 345667888887 68887778
Q ss_pred CccccccCCHHHHHHHHHHHHHHHHCCC-CcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchh
Q 010896 146 DGKNDRRLDDCWRYCLVAGRRALEEASL-SPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSI 224 (498)
Q Consensus 146 ~~~~~~~~d~~~~l~l~aa~~AL~dAG~-~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (498)
+++ +|||+++|+++++++||+|||+ +++ .++..++||++|++.++...+.+.+..+...+...++|+.+++.+
T Consensus 81 ~~~---~~d~~~~l~l~aa~~AL~dAG~~~~~---~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 154 (431)
T 2ix4_A 81 NSK---AVANFIGYAVCAADEALRDAEWLPTE---EEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKIL 154 (431)
T ss_dssp CST---TCCHHHHHHHHHHHHHHHHTTCCCCS---HHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHC
T ss_pred Chh---hCCHHHHHHHHHHHHHHHHcCCCCcc---ccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcch
Confidence 776 8999999999999999999999 643 456678999999999988888887877777777788999999999
Q ss_pred hhhhHHHHHHhhcCCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccC-CCCCCC
Q 010896 225 TNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQR-NEYPKR 303 (498)
Q Consensus 225 ~n~~a~~ia~~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~-~~~p~~ 303 (498)
.+.++.+|++.||++||+++|+++|+|++.||+.|+++|++|+||++||||+|.++++..+..|..+++++.+ +.+|++
T Consensus 155 ~~~~a~~ia~~lgl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~ 234 (431)
T 2ix4_A 155 VNMASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQE 234 (431)
T ss_dssp TTHHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGG
T ss_pred hHHHHHHHHHHHCCCCceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccccCccccCCccc
Confidence 9999999999999999999999999999999999999999999999999999998999988999999999864 556788
Q ss_pred CCCcCCCCCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCc
Q 010896 304 ASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEV 383 (498)
Q Consensus 304 ~~rpfd~~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dI 383 (498)
.|+|||.+++|+++||||+++||+++++|+++|++||++|+|++.++|+++++.|.+++.++.++++++|+++|++++||
T Consensus 235 ~~~pfd~~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dI 314 (431)
T 2ix4_A 235 ASRPFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQI 314 (431)
T ss_dssp SCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGC
T ss_pred ccccCCCCCCCceeecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHc
Confidence 99999999999999999999999999999999999999999999999999999888889999999999999999999999
Q ss_pred CEEEccCCCCccCcHHHHHHHHHHhcC---CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCC
Q 010896 384 NYVNAHATSTLAGDLAEVNAIKKVFKD---TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEV 460 (498)
Q Consensus 384 d~i~~hgtgt~~~D~~E~~al~~~f~~---~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~ 460 (498)
||||+|||||+.+|.+|..++.++|+. ..+++++++|+++||+++|+|++++++++++|+++.|||++|+++|+|.+
T Consensus 315 d~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~l~~~~ipp~~~~~~~~p~~ 394 (431)
T 2ix4_A 315 DYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIF 394 (431)
T ss_dssp CEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTC
T ss_pred CEEEEeCCcCcccCHHHHHHHHHHHcccccCCCceeecchhhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCC
Confidence 999999999999999999999999974 24689999999999999999999999999999999999999999999999
Q ss_pred CcCcCCCccccc-CccEEEEEccccccceeeEEEeeC
Q 010896 461 TIDTVPNVKKQH-HVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 461 ~~~~v~~~~~~~-~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
++++++.+.+++ +.|++++|||||||+|+|+||++|
T Consensus 395 ~~~~v~~~~~~~~~~~~a~~~sfGfGG~na~~il~~~ 431 (431)
T 2ix4_A 395 DKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFASI 431 (431)
T ss_dssp CSSSCCCSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred CcccCCccccccCCCCEEEEecccCCCeeEEEEEeeC
Confidence 999998766666 789999999999999999999986
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-75 Score=659.13 Aligned_cols=394 Identities=22% Similarity=0.351 Sum_probs=352.8
Q ss_pred CCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCC-CCCCCCC-CcccccccCC---CCCCCC-CCccccccCCHHHH
Q 010896 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPID-RFDASSF-SVRFGGQIRD---FSSKGY-IDGKNDRRLDDCWR 158 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~-~~~~~~~-~~~~~g~i~~---~d~~~~-i~~~~~~~~d~~~~ 158 (498)
+++|+||||||++|+|.++++||++|.+|++++++.+ +|+...+ .....|.+++ ||+.+| |++++++.|||++|
T Consensus 3 ~~~IaIvGmg~r~P~~~~~~~~W~~l~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~i~~~ea~~mDp~~r 82 (965)
T 3hhd_A 3 GEEVVIAGMSGKLPESENLQEFWDNLIGGVDMVTDDDRRWKAGLYGLPRRSGKLKDLSRFDASFFGVHPKQAHTMDPQLR 82 (965)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEECSSSSSCTTGGGCCSCEECCSCSSCCCTTTTTCCHHHHHTSCHHHH
T ss_pred CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCcccCCCcccccccccCcccccccCChhhcChhhcCCCHHHHhhcCHHHH
Confidence 4689999999999999999999999999999999876 4554322 1233455544 999999 99999999999999
Q ss_pred HHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcC
Q 010896 159 YCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGL 238 (498)
Q Consensus 159 l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl 238 (498)
|+++++++||+|||+ +++.++..++|||+|++.+.+ ..........+.++.+++...++++++|++.|||
T Consensus 83 L~leaa~eALedAGi---~~~~i~~~~~Gv~vG~~~~d~-------~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl 152 (965)
T 3hhd_A 83 LLLEVTYEAIVDGGI---NPDSLRGTHTGVWVGVSGSET-------SEALSRDPETLVGYSMVGCQRAMMANRLSFFFDF 152 (965)
T ss_dssp HHHHHHHHHHHHTTC---CGGGGTTSCCEEEEEECCCHH-------HHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCC---ChHHcCCceeEEEEeccchhH-------HHHHhcCccccCcccccccccchHHHHHHHHhCC
Confidence 999999999999999 556788899999999865432 2233455667788888888899999999999999
Q ss_pred CCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCcccc
Q 010896 239 MGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMG 318 (498)
Q Consensus 239 ~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~g 318 (498)
+||+++|+++|+||+.||++|+++|++|+||++||||+|.+++|..+..|.++++|+ |++.|+|||.+++||++|
T Consensus 153 ~GPs~tvdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~~~~~~~~~~ls-----~~g~~~~Fd~~adG~~~g 227 (965)
T 3hhd_A 153 RGPSIALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLS-----PEGTCKAFDTAGNGYCRS 227 (965)
T ss_dssp CSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHHHHHHHHHTCBC-----TTCCCCTTBTTCCSBCBB
T ss_pred CCCeeeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCcC-----CCCccccchhccCCcccc
Confidence 999999999999999999999999999999999999999999999999999999998 578999999999999999
Q ss_pred ceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCC-CCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCc
Q 010896 319 EGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHH-MTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGD 397 (498)
Q Consensus 319 EGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~-~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D 397 (498)
||++++|||++++|+ +||++|+|++.++|+.+ .....|++.++.++|++||++||++|+||||||+|||||++||
T Consensus 228 EGagavvL~~l~~A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl~p~dIdyvEaHgTgT~~gD 303 (965)
T 3hhd_A 228 EGVVAVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEAHGTGTKVGD 303 (965)
T ss_dssp CEEEEEEEEEGGGCS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCTTHH
T ss_pred ceEEEEEEecHHHcC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHhccccccCCCCCCCC
Confidence 999999999999885 49999999999999976 4556678899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcC--CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCC-cC----cCCCccc
Q 010896 398 LAEVNAIKKVFKD--TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVT-ID----TVPNVKK 470 (498)
Q Consensus 398 ~~E~~al~~~f~~--~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~-~~----~v~~~~~ 470 (498)
++|.++|.++|+. ..+++++|+|+++||+++|||++++||++++|++++|||++|+++|||.++ +. .++.+..
T Consensus 304 ~~E~~Al~~~f~~~~~~~~~vgs~Ks~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~~v~~~~~ 383 (965)
T 3hhd_A 304 PQELNGITRALCATRQEPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHFHSPNPEIPALLDGRLQVVDQPL 383 (965)
T ss_dssp HHHHHHHHHHHCSSCSSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCCSBCTTCHHHHHTSEEECCSCE
T ss_pred HHHHHHHHHHhcccCCCceeeeccccccccchhhhhHHHHHHHHHHHhcCCcCCccCCCCCCccCcccccCceeecCCCc
Confidence 9999999999975 357899999999999999999999999999999999999999999999997 22 3555566
Q ss_pred ccCccEEEEEccccccceeeEEEeeCC
Q 010896 471 QHHVNVAISNSFGFGGHNSVVVFAPFS 497 (498)
Q Consensus 471 ~~~~~~alv~s~G~gG~n~~~vl~~~~ 497 (498)
+++.++++||||||||+|+|+||++++
T Consensus 384 ~~~~~~a~v~sfG~gG~Nah~il~~~~ 410 (965)
T 3hhd_A 384 PVRGGNVGINSFGFGGSNVHIILRPNT 410 (965)
T ss_dssp ECCSCEEEEEEECTTSEEEEEEEEECC
T ss_pred cCCCCeEEEecccCCCceEEEEeccCC
Confidence 667789999999999999999999875
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-79 Score=681.92 Aligned_cols=469 Identities=22% Similarity=0.281 Sum_probs=397.7
Q ss_pred hccCccCCcccccCchhhHhhhhCCCCcccccccccCcccccccccccccCCCCcccccccCCCCCCCCCCCCCCCCcEE
Q 010896 10 ALGVVFGNKQVKSNGAASLAQYSGLRPAENFQFASAGITTTIKQSGLICSSGPKCRTIRVMASPTASAPKREKDPKKRIV 89 (498)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ 89 (498)
.-|+||++++|+.+|+++|.+++|+|+++++.|++|++.++...+++.... +..++..+...+........++|+
T Consensus 880 ~tgepv~d~~i~~~~~~~i~~~tGiRl~~~~~fd~~~p~~~~~L~e~~l~~-----d~~~~~~s~~~a~~~~~~~~d~v~ 954 (1688)
T 2pff_A 880 KTKEPVDDKDVKAKYETSILEHSGIRLIEPELFNGYNPEKKEMIQEVIVEE-----DLEPFEASKETAEQFKHQHGDKVD 954 (1688)
T ss_dssp CSSSSTTSCCCTTTSSSSSSSGGGTTTSSSSCCSSSSSSCCSSSEECCCCC-----CCSCCCCCCCCTTHHHHHHHHSCT
T ss_pred CCCCccchhHHHHHHHHHHHHhcCCCCCCCccCCCCCHHHHhHhhHHhcCC-----CCcccccChhhhhhccccCCCCeE
Confidence 358999999999999999999999999999999999998866555543333 223333333333322222234565
Q ss_pred EEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccC-CCCCCCC-CCccccccCCHHHHHHHHHHHHH
Q 010896 90 ITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIR-DFSSKGY-IDGKNDRRLDDCWRYCLVAGRRA 167 (498)
Q Consensus 90 ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~-~~d~~~~-i~~~~~~~~d~~~~l~l~aa~~A 167 (498)
|+++ .+.++||++|++|++++.+. ...++.+++|+|+ +||+.+| |+++++++|||+++|+++++++|
T Consensus 955 I~~i-------~~~eefW~~L~~G~~~i~p~----~~~~~~~vaG~Ip~gFD~~~fGIs~~ea~~mDP~qrLaLeAa~EA 1023 (1688)
T 2pff_A 955 IFEI-------PETGEYSVKLLKGATLYIPK----ALRFDRLVAGQIPTGWNAKTYGISDDIISQVDPITLFVLVSVVEA 1023 (1688)
T ss_dssp TSCC-------CCCCSSSCCCCCCTTCCCCC----CCCEECCSSCSCCCCCCCCCSSCCTTTBTTBCSSTTHHHHHHHHH
T ss_pred EecC-------CCHHHHHHHHHcCCCEEecC----CCCCCceEEEEECCCCChhhCCCCHHHHhccCHHHHHHHHHHHHH
Confidence 5542 56789999999999999983 2345568899997 6999999 99999999999999999999999
Q ss_pred HHHCCCC-ccc-ccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHH-hhcCCCCccc
Q 010896 168 LEEASLS-PQV-LENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAI-DTGLMGPNYS 244 (498)
Q Consensus 168 L~dAG~~-~~~-~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~-~lgl~Gp~~t 244 (498)
|+|||++ |.. ...++.+++|||+|++++++..+...+...+ ....++++.++..+.|.+++++++ .||++||+++
T Consensus 1024 LedAGI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~--~~~~v~~~~l~~~~~nt~Aa~Vs~~~LGl~GPs~T 1101 (1688)
T 2pff_A 1024 FIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRF--KDEPVQNDILQESFINTMSAWVNMLLISSSGPIKT 1101 (1688)
T ss_dssp HTTTTCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSS--SCCCCCSTTHHHHCTHHHHHHHHHSSCCCCCCCCC
T ss_pred HHHcCCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHH--hcCCCCcchhccccHHHHHHHHHHHHcCCcCCeEE
Confidence 9999995 321 2237889999999999999887776654422 234578888889999999999999 7999999999
Q ss_pred cccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccC------CCCCCCCCCcCCCCCCCcccc
Q 010896 245 ISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQR------NEYPKRASRPWDKDRDGFVMG 318 (498)
Q Consensus 245 v~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~------~~~p~~~~rpfd~~~~G~v~g 318 (498)
|+++|+||+.||+.|++.|++|+||+|||||+|. ++|..+..|..+++++.. +.+|++.|||||.+++||++|
T Consensus 1102 VdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~-msp~~~~~Fa~mgaLS~~~~e~a~G~~Pd~~cRPFd~~rdGfv~G 1180 (1688)
T 2pff_A 1102 PVGACATSVESVDIGVETILSGKARICIVGGYDD-FQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFMEA 1180 (1688)
T ss_dssp CCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCC-CCTTTTTTTTTTSCSCCTTTTTTSSCCSSSSCCSSSSSCCCCCCC
T ss_pred ecCCCchHHHHHHHHHHHHHCCCCCEEEEeeecc-CCHHHHHHHHhccccccChhhhhcCCChhhccCcCccCCCCCccc
Confidence 9999999999999999999999999999999998 688888899999999864 456899999999999999999
Q ss_pred ceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCC------------------hH-----------------
Q 010896 319 EGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSD------------------GL----------------- 363 (498)
Q Consensus 319 EGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~------------------~~----------------- 363 (498)
||||++||+++++|+++|++||++|+|+++++|+.+.+.|.|. +.
T Consensus 1181 EGAGavVLesle~Al~~G~~IyAvI~GsavnsDg~~~SipAPg~GiLt~Ar~~~G~~taPSp~ld~~~R~rql~~~~~~i 1260 (1688)
T 2pff_A 1181 QGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQI 1260 (1688)
T ss_dssp SCCEEEEEECSHHHHSSSCCCCCEECCCCCCCCCCCSSSCCCCSSSSSSSSSCCCCSSCSSCCSCTTCCHHHHSHHHHHH
T ss_pred cceEEEEeCcHHHHHHCCCceEEEEEEEEEECCCCccCCCCCCCCccchhhhcccccCCCCcccChHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998865544431 00
Q ss_pred --------------------------HH-------------------------------HHHHHHHHHHcCCCCCCcCEE
Q 010896 364 --------------------------GV-------------------------------SSCIAKSLEDAGVSPEEVNYV 386 (498)
Q Consensus 364 --------------------------~~-------------------------------~~~i~~Al~~Agl~~~dId~i 386 (498)
.+ .++|++||+++||+++|||||
T Consensus 1261 ~~~~~~e~~~l~~e~~~~g~~~~~~~aQer~~~i~~~~~r~~~~~~~~~Gn~f~~~d~~~~aIr~ALa~AGLtpdDIdyV 1340 (1688)
T 2pff_A 1261 KDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVA 1340 (1688)
T ss_dssp HHHHHHHHHHHHHHSSSSCSSHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTSSSSSCTTCCSHHHHTTSSCSSTTCCCCC
T ss_pred HHHHHhhHHHHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHHHHHhccCCceecchHHHHHHHHHHHHcCCCHHHeeEE
Confidence 12 468999999999999999999
Q ss_pred EccCCCCccCcHHHHHHHHHHhcC-----CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCC
Q 010896 387 NAHATSTLAGDLAEVNAIKKVFKD-----TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVT 461 (498)
Q Consensus 387 ~~hgtgt~~~D~~E~~al~~~f~~-----~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~ 461 (498)
|+|||||++||++|.++|.++|++ ..++++++.|+++||++||||++++++++++|++|+|||++|+++|||.++
T Consensus 1341 EaHGTGT~lgD~iE~~AL~~af~~~gr~~g~pl~V~S~KsliGHp~GAAGa~~Lik~llaL~~G~IPptln~d~pdp~l~ 1420 (1688)
T 2pff_A 1341 SFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILE 1420 (1688)
T ss_dssp CCCCCSCSSSSTTTTTTTGGGTGGGCCCTTCCCCCCCCTTTTCCCSSTHHHHHHHHHHHHSTTCCCCCCSCCSCCCTTCC
T ss_pred EEeCCCCccccHHHHHHHHHHHhhhCcCCCCeEEEEeChhhhcchHHHhhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC
Confidence 999999999999999999999975 246899999999999999999999999999999999999999999999995
Q ss_pred -cCcC--CCccccc-CccEEEEEccccccceeeEEEeeCC
Q 010896 462 -IDTV--PNVKKQH-HVNVAISNSFGFGGHNSVVVFAPFS 497 (498)
Q Consensus 462 -~~~v--~~~~~~~-~~~~alv~s~G~gG~n~~~vl~~~~ 497 (498)
++++ +.+..++ ++|++++|||||||+|+|+||++++
T Consensus 1421 ~~d~v~~p~~~~~~~~~r~AlVnSFGFGGtNAhvILe~p~ 1460 (1688)
T 2pff_A 1421 QFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHPD 1460 (1688)
T ss_dssp SSCCCCSCTTCCSSSSSSCCCCCCCCSTTCCCCCCEECSS
T ss_pred cCCceeecCccccCCCCcEEEEeeECCCCeeEEEEEeCCC
Confidence 6665 4444333 6899999999999999999999864
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-75 Score=706.89 Aligned_cols=393 Identities=24% Similarity=0.351 Sum_probs=352.8
Q ss_pred CcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCC-CCCCCCCC-cccccccCC---CCCCCC-CCccccccCCHHHHH
Q 010896 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPID-RFDASSFS-VRFGGQIRD---FSSKGY-IDGKNDRRLDDCWRY 159 (498)
Q Consensus 86 ~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~-~~~~~~~~-~~~~g~i~~---~d~~~~-i~~~~~~~~d~~~~l 159 (498)
++|+||||||++|+|.++++||++|.+|++++++.+ +|+...+. ...+|.+++ ||+.+| |++++++.||||+||
T Consensus 2 ~~iaI~G~~~~~p~~~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fd~~~f~i~~~ea~~~dpq~rl 81 (2512)
T 2vz8_A 2 EEVVIAGMSGKLPESENLEEFWANLIGGVDMVTADDRRWKAGLYGLPRRMGKLKDLSRFDASFFGVHSKQANTMDPQLRM 81 (2512)
T ss_dssp CCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECSSSSCTTGGGCCSEEECCSCSSCCCTTTTTCCHHHHHTSCHHHHH
T ss_pred CCEEEEeeeeeCCCCCCHHHHHHHHHcCCccccCCCcccccccccCcccceecCCcccCCHhhcCCCHHHHHhcCHHHHH
Confidence 579999999999999999999999999999999875 56654321 245566654 999999 999999999999999
Q ss_pred HHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCC
Q 010896 160 CLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLM 239 (498)
Q Consensus 160 ~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~ 239 (498)
++++++|||+|||+ .+..++++++|||+|++.+.+. .........+.++.+++...++++++||+.|||+
T Consensus 82 ~l~~~~eAle~Ag~---~~~~~~~~~~gv~~G~~~~~~~-------~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l~ 151 (2512)
T 2vz8_A 82 LLEVTYEAIVDGGI---NPASLRGTSTGVWVGVSSSDAS-------EALSRDPETLVGYSMIGCQRAMMANRLSFFFDFK 151 (2512)
T ss_dssp HHHHHHHHHGGGTC---CGGGGTTCSCEEEEEECCCHHH-------HHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHCCC---ChhhcCCCCeEEEEEeccHHHH-------HHHhcCccccCcceecccchhHHHHHHHHHhCCC
Confidence 99999999999999 4556788999999998754322 2223445677888899999999999999999999
Q ss_pred CCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccc
Q 010896 240 GPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGE 319 (498)
Q Consensus 240 Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gE 319 (498)
||+++|++||+||++||++||++|++|+||++||||++.+++|..+..|.++++|| |+++|||||.++|||++||
T Consensus 152 Gps~tv~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~~~~~~~~~~ls-----~~g~c~~Fd~~adG~~~gE 226 (2512)
T 2vz8_A 152 GPSITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLS-----QDGTCRSFDAEGTGYCRAE 226 (2512)
T ss_dssp SCEEEEECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHHHHHHHHTTCBC-----TTCSCCSSSTTCCCBCBBC
T ss_pred CCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHHHHHHccCCCCC-----CCCCCCCCCCCCCCcceee
Confidence 99999999999999999999999999999999999999999999999999999999 5789999999999999999
Q ss_pred eeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCC-CCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcH
Q 010896 320 GCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHH-MTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDL 398 (498)
Q Consensus 320 GaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~-~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~ 398 (498)
|+|++|||++++|+ +|||+|+|+++++||++ ...+.|++.++.++|++||++||++|+||+|||+|||||++||+
T Consensus 227 G~~~~vLk~l~~A~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~i~~al~~ag~~p~~i~yveaHGTgT~~gD~ 302 (2512)
T 2vz8_A 227 AVVAVLLTKKSLAR----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPESLEYIEAHGTGTKVGDP 302 (2512)
T ss_dssp EEEEEEEEEGGGCS----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHHHHTTSGGGSSCTTSCCEEECCCCCCTTHHH
T ss_pred eEEEEEEEEHHHCC----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEeecCCCCCCCH
Confidence 99999999999985 59999999999999964 45556789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcC--CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCC-cC----cCCCcccc
Q 010896 399 AEVNAIKKVFKD--TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVT-ID----TVPNVKKQ 471 (498)
Q Consensus 399 ~E~~al~~~f~~--~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~-~~----~v~~~~~~ 471 (498)
+|.+||.++|+. ..+++++|+|+|+||+++|||++++||++++|++|.||||+|+++|||.++ ++ .++.+..+
T Consensus 303 ~E~~al~~~f~~~~~~~~~igS~Ks~iGH~~~AaG~~~~ik~~l~l~~~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~~ 382 (2512)
T 2vz8_A 303 QELNGIVNALCATRREPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLHYHTPNPEIPALQDGRLQVVDRPLP 382 (2512)
T ss_dssp HHHHHHHHHHCSCSSSCCEEECHHHHHCBCGGGHHHHHHHHHHHHHTTTBCCCCSSCCSCCTTSSSSSSSSCEECCSCCB
T ss_pred HHHHHHHHHhcccCCCCceeecccccccccccccchhHHHHHHHHHHCCCcCCCCCCCCCCccccccccCceEecCCCcc
Confidence 999999999985 347899999999999999999999999999999999999999999999996 43 24445555
Q ss_pred cCccEEEEEccccccceeeEEEeeCC
Q 010896 472 HHVNVAISNSFGFGGHNSVVVFAPFS 497 (498)
Q Consensus 472 ~~~~~alv~s~G~gG~n~~~vl~~~~ 497 (498)
++.++++||||||||+|+|+||++++
T Consensus 383 ~~~~~a~vnsfG~gG~Nah~il~~~~ 408 (2512)
T 2vz8_A 383 IRGGNVGINSFGFGGSNVHVILQPNS 408 (2512)
T ss_dssp CCSCCEEEEEEETTTEEEEEEEEECC
T ss_pred CCCCeEEEeccCCCCceeEEEEccCC
Confidence 66678999999999999999999874
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-75 Score=648.91 Aligned_cols=397 Identities=26% Similarity=0.379 Sum_probs=355.1
Q ss_pred CCcEEEEeeceecCCC-CCHHHHHHHHHcCCCCcccCC--C-CCCCCCCcccccccCC---CCCCCC-CCccccccCCHH
Q 010896 85 KKRIVITGMGLVSVFG-SDIDKFYNKLLEGESGISPID--R-FDASSFSVRFGGQIRD---FSSKGY-IDGKNDRRLDDC 156 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g-~~~~~~~~~L~~g~~~i~~~~--~-~~~~~~~~~~~g~i~~---~d~~~~-i~~~~~~~~d~~ 156 (498)
.++|+||||||++|+| .++++||++|++|++++++++ | |+. ....+++|++++ ||+.+| |++++.+.|||+
T Consensus 38 ~~~iaIvG~~~~~Pgg~~~~~~~w~~L~~g~~~i~~~p~~r~~~~-~~~~~~~~~l~~~~~fD~~~f~i~~~ea~~mdp~ 116 (917)
T 2hg4_A 38 GEPIAIVGMACRFPGDVDSPESFWEFVSGGGDAIAEAPADRGWEP-DPDARLGGMLAAAGDFDAGFFGISPREALAMDPQ 116 (917)
T ss_dssp HCCEEEEEEEEEBTTTBCSHHHHHHHHHTTCCCCEECCGGGCCCC-CSSCCEEBCCTTTTEECTGGGTCCHHHHHHSCHH
T ss_pred CCCEEEEeceEECCCCCCCHHHHHHHHHcCCCccccCCcccccCC-CCCcceeeEecCccccChhhcCCCHHHHHhcCHH
Confidence 3579999999999987 789999999999999999764 4 543 234678888864 999888 999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
++|+++++++||+|||+ .++.++..++|||+|++...+.... ......+.++.+++...+.++++|++.|
T Consensus 117 ~rl~leaa~eALedAGi---~~~~i~~~~~gV~vG~~~~d~~~~~-------~~~~~~~~~~~~~g~~~~~~a~ris~~l 186 (917)
T 2hg4_A 117 QRIMLEISWEALERAGH---DPVSLRGSATGVFTGVGTVDYGPRP-------DEAPDEVLGYVGTGTASSVASGRVAYCL 186 (917)
T ss_dssp HHHHHHHHHHHHHHTTC---CGGGGTTSCEEEEEEECCCCCSCCT-------TSSCGGGGGGHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC---ChHHcCCcceEEEEEeCCchhhhhh-------hcCccccCcccccccccchHHHHHHHhc
Confidence 99999999999999999 5567888999999999866543211 2234455667777778889999999999
Q ss_pred cCCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCcc
Q 010896 237 GLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFV 316 (498)
Q Consensus 237 gl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v 316 (498)
|++||+++|+++|+||+.||++|+++|++|+||++||||+|.+..|..+..|..+++++ |++.|+|||.+++|++
T Consensus 187 gl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~~~~~~~~~ls-----~~g~~~pFd~~adG~~ 261 (917)
T 2hg4_A 187 GLEGPAMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQGGLA-----ADGRCKPFSKAADGFG 261 (917)
T ss_dssp TCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHHHHHTTSSCBC-----TTSCCCTTBTTCCCBC
T ss_pred CCCCCeEeecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhhHhhhhccCcC-----CccccCcccccccCCC
Confidence 99999999999999999999999999999999999999999999999888999999998 5789999999999999
Q ss_pred ccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccC
Q 010896 317 MGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAG 396 (498)
Q Consensus 317 ~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~ 396 (498)
+|||++++|||++++|+++|++||++|+|+++++|+.+...+.|++.++.++|+++|++||++|+||||||+|||||++|
T Consensus 262 ~gEGagavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~p~dId~veaHgtgT~~g 341 (917)
T 2hg4_A 262 LAEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAHGTGTRLG 341 (917)
T ss_dssp BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCTTH
T ss_pred CcceEEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEeeccCCCccC
Confidence 99999999999999999999999999999999999998888888999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhcC----CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCc----CCCc
Q 010896 397 DLAEVNAIKKVFKD----TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDT----VPNV 468 (498)
Q Consensus 397 D~~E~~al~~~f~~----~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~----v~~~ 468 (498)
|++|.++|.++|+. ..+++++|+|+++||+++|||++++++++++|+++.|||++|+++|||.++++. ++.+
T Consensus 342 D~~E~~al~~~fg~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~~ipp~~~~~~~~p~i~~~~~~~~v~~~ 421 (917)
T 2hg4_A 342 DPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQIEWDLGAVSVVSQ 421 (917)
T ss_dssp HHHHHHHHHTTTTTSSCTTSCCEEECTHHHHCBCGGGTTHHHHHHHHHHHHHTEECCCTTCCSBCTTSCC---CCEECCS
T ss_pred cHHHHHHHHHHhccccCCCCceeccCcccceecchhhhHHHHHHHHHHHHhcCCcCCCCCCCCCCccCCccccceeecCC
Confidence 99999999999975 346899999999999999999999999999999999999999999999998765 4443
Q ss_pred ccc----cCccEEEEEccccccceeeEEEeeCC
Q 010896 469 KKQ----HHVNVAISNSFGFGGHNSVVVFAPFS 497 (498)
Q Consensus 469 ~~~----~~~~~alv~s~G~gG~n~~~vl~~~~ 497 (498)
.+. ..+|+++||||||||+|+|+||++++
T Consensus 422 ~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~ 454 (917)
T 2hg4_A 422 ARSWPAGERPRRAGVSSFGISGTNAHVIVEEAP 454 (917)
T ss_dssp CEECCCCSSCCEEEEEEECTTSEEEEEEEEECC
T ss_pred cccCCCCCCCCEEEEeeecCCCceEEEEeccCC
Confidence 333 24699999999999999999999975
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-77 Score=688.59 Aligned_cols=467 Identities=21% Similarity=0.287 Sum_probs=400.0
Q ss_pred ccCccCCcccccCchhhHhhhhCCCCcccccccccCcccccccccccccCCCCcccccccCCCCCCCCCCCCCCCCcEEE
Q 010896 11 LGVVFGNKQVKSNGAASLAQYSGLRPAENFQFASAGITTTIKQSGLICSSGPKCRTIRVMASPTASAPKREKDPKKRIVI 90 (498)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~I 90 (498)
.++||++++|+.+|+++|.+++|+|+++++.|++|++.++...+++..... ..++..+...+........++|.|
T Consensus 1055 ~~~~v~~~~i~~~~~~~i~~~tgir~~~~~~fd~~~p~~~~~~~~~~~~~~-----~~~~~~~~~~a~~~~~~~~~~~~i 1129 (1878)
T 2uv9_A 1055 TGEPVDDKDVKAKYEKYILEHSGIRLIEPELFGGYDPNRKQLLQEVVIEQD-----LEPFEASKEQAEEFKREHGDKVEI 1129 (1878)
T ss_dssp SCCBCCHHHHHHHHHHHHHHTSEEEECCGGGGTTCCGGGEEEEEEEECCSC-----CCCEEECHHHHHHHHHHHGGGEEE
T ss_pred cCCccchhhhHHHHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHhhcccC-----CCccccChhhhhhccccCCCCeeE
Confidence 589999999999999999999999999999999999998876666654441 222222221111222223467888
Q ss_pred EeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccC-CCCCCCC-CCccccccCCHHHHHHHHHHHHHH
Q 010896 91 TGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIR-DFSSKGY-IDGKNDRRLDDCWRYCLVAGRRAL 168 (498)
Q Consensus 91 tG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~-~~d~~~~-i~~~~~~~~d~~~~l~l~aa~~AL 168 (498)
+. ..+.++||++|++|++++.+.. ..++.+++|+|+ +||+.+| |+++++++|||+++|+++++++||
T Consensus 1130 ~~-------~~~~~~~w~~L~~G~~~i~p~~----~~~~~~~aG~i~~~FD~~~fgI~~~ea~~mDp~~~l~L~aa~eAL 1198 (1878)
T 2uv9_A 1130 FE-------IPETGQYTVRLRKGATLLIPKA----LQFDRLVAGQIPTGWDARRYGVPEDIIQQVDPVTLYVLVSVAEAL 1198 (1878)
T ss_dssp EE-------CTTTSCEEEEECTTCEEEEEEE----ECCSCCEEEECCTTCCHHHHTCCHHHHHHSCHHHHHHHHHHHHHH
T ss_pred ee-------CCChHHHHHHHHcCCCeeeecC----CCCcceEEEEeCCCCCHhhcCCCHHHHHhcCHHHHHHHHHHHHHH
Confidence 74 3677999999999999999842 245568899997 6999988 999999999999999999999999
Q ss_pred HHCCCC-ccc-ccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHH-hhcCCCCcccc
Q 010896 169 EEASLS-PQV-LENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAI-DTGLMGPNYSI 245 (498)
Q Consensus 169 ~dAG~~-~~~-~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~-~lgl~Gp~~tv 245 (498)
+|||++ |.. .+.++..++|||+|++++++..+...+...+. ...++++.++..+.|+++++|++ .||++||++++
T Consensus 1199 ~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~--~~~v~~~~~~~~~~n~~aa~vs~~~lg~~GP~~tv 1276 (1878)
T 2uv9_A 1199 LSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYL--DKPVQKDILQESFVNTMAAWVNMLLLSSTGPIKTP 1276 (1878)
T ss_dssp HTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTT--TCCCCSCTTGGGSHHHHHHHHHHHTCCCCCCBCCB
T ss_pred HHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHh--cCCCCchhhhcchHHHHHHHHHHHhcCCCCCeEEE
Confidence 999995 321 12378899999999999998877766654322 24588889999999999999999 59999999999
Q ss_pred ccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccC------CCCCCCCCCcCCCCCCCccccc
Q 010896 246 STACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQR------NEYPKRASRPWDKDRDGFVMGE 319 (498)
Q Consensus 246 ~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~------~~~p~~~~rpfd~~~~G~v~gE 319 (498)
+++|+||+.||+.||+.|++|+||+|||||+|. +++..+..|..+++++.. +.+|++.|||||..++||++||
T Consensus 1277 ~tACASsl~Al~~A~~~I~sG~advalvGGvd~-~~~~~~~~f~~m~als~~~de~a~g~~p~~~~RPfd~~r~Gfv~gE 1355 (1878)
T 2uv9_A 1277 VGACATAVESLDVGYDTIMQGKARVCLVGGFDD-FQEEGSYEFANMGATSNAKEEFARGREPGEMSRPTSTTRNGFMESQ 1355 (1878)
T ss_dssp CCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEEC-CCHHHHHHHHHHTCBCCHHHHHTTTCCTTSSCCSSBTTCCCBCBBC
T ss_pred cCcchHHHHHHHHHHHHHHcCCCCEEEEeeecc-CChHHHHHHHHhhhhccchhhhhcCCCcccCcCCCccCCCCCcccc
Confidence 999999999999999999999999999999998 889999999999999853 5679999999999999999999
Q ss_pred eeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCC-h------------------------------------
Q 010896 320 GCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSD-G------------------------------------ 362 (498)
Q Consensus 320 GaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~-~------------------------------------ 362 (498)
|||++||+++++|+++|++||++|+|+++++|+.+.+.|.|. |
T Consensus 1356 Gag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~~t~ar~~~~~~ps~~~~~~~r~~~~~~~~~~i~~~ 1435 (1878)
T 2uv9_A 1356 GCGVQVIMTAQLALEMGVPIYGIVAMTSTATDKIGRSVPAPGQGVLTTAREKSGNFPSPLLDIKYRRRQLELRRQQIKQW 1435 (1878)
T ss_dssp EEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCSSCCCSCGGGGGCCCCCSSCCGGGSHHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEEeeHHHHHHCCCceEEEEEEEEEecCCCccCCCCCCcchhhhhhhccccCCCcccchHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999876666551 1
Q ss_pred ------------------------------HHHH-------------------------------HHHHHHHHHcCCCCC
Q 010896 363 ------------------------------LGVS-------------------------------SCIAKSLEDAGVSPE 381 (498)
Q Consensus 363 ------------------------------~~~~-------------------------------~~i~~Al~~Agl~~~ 381 (498)
..+. ++|++||+++||+++
T Consensus 1436 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~Q~~~~~i~~~~~~q~~~a~~~~g~~~~~~~~~~~~ir~ALa~aGl~~~ 1515 (1878)
T 2uv9_A 1436 KESEYLYLQEEVAAIKSQRSEEDGPFDETAYLRERTEHIEREARRQEAEAQTSFGNEFWRRDSRIAPLRGALATWGLTID 1515 (1878)
T ss_dssp HHHHHHHHHHHHHHTTTTCCSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTTCTTSCHHHHHHHTTTCCGG
T ss_pred hhhhhhhhhHHHHhhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccChHHHHHHHHHHHcCCCHH
Confidence 0122 789999999999999
Q ss_pred CcCEEEccCCCCccCcHHHHHHHHHHhcC-----CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCC
Q 010896 382 EVNYVNAHATSTLAGDLAEVNAIKKVFKD-----TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNL 456 (498)
Q Consensus 382 dId~i~~hgtgt~~~D~~E~~al~~~f~~-----~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~ 456 (498)
||||||+|||||++||++|.++|.++|++ ..++++++.|+++||++||||++++++++++|++|+|||++|+++|
T Consensus 1516 DId~veaHGTgT~~gD~~E~~al~~~f~~~~r~~~~pl~v~s~KsliGH~~gAAGa~~li~~l~~L~~g~iPp~~n~d~~ 1595 (1878)
T 2uv9_A 1516 DLGVASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKGAAGAWMLNGCLQVLNTGIVPGNRNADNV 1595 (1878)
T ss_dssp GEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCTTCHHHHHHHHHHHHHTTCEECCCTTCCSB
T ss_pred HeeEEEEcCCCCcccCHHHHHHHHHHHhhcCCCCCCceeEEecccccCChHhHhhHHHHHHHHHHHhcCCCCCCCCCCCC
Confidence 99999999999999999999999999974 2469999999999999999999999999999999999999999999
Q ss_pred CCCCC-cCcC--CCcccc-cCccEEEEEccccccceeeEEEeeC
Q 010896 457 EPEVT-IDTV--PNVKKQ-HHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 457 ~~~~~-~~~v--~~~~~~-~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
||.++ ++++ +....+ .++|+++||||||||+|+|+||+++
T Consensus 1596 dp~i~~~~~v~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p 1639 (1878)
T 2uv9_A 1596 DKVMEQFDYIVYPSRSIKTDGIKAFSVTSFGFGQKGAQAIGVHP 1639 (1878)
T ss_dssp CGGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECT
T ss_pred CCccccccccccccccccCCCCCEEEEccCCCCCeeEEEEEecC
Confidence 99994 7765 443333 4689999999999999999999986
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-74 Score=648.03 Aligned_cols=397 Identities=25% Similarity=0.371 Sum_probs=355.4
Q ss_pred CCcEEEEeeceecCCC-CCHHHHHHHHHcCCCCcccCC--C-CCCCC-----------CCcccccccCC---CCCCCC-C
Q 010896 85 KKRIVITGMGLVSVFG-SDIDKFYNKLLEGESGISPID--R-FDASS-----------FSVRFGGQIRD---FSSKGY-I 145 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g-~~~~~~~~~L~~g~~~i~~~~--~-~~~~~-----------~~~~~~g~i~~---~d~~~~-i 145 (498)
.++|+||||||++|+| .++++||++|.+|++++++++ | |+... ...+++|++++ ||+.+| |
T Consensus 5 ~~~iaIvG~~~~~P~g~~~~~~~w~~L~~g~~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~FD~~~f~i 84 (915)
T 2qo3_A 5 SDPIAIVSMACRLPGGVNTPQRLWELLREGGETLSGFPTDRGWDLARLHHPDPDNPGTSYVDKGGFLDDAAGFDAEFFGV 84 (915)
T ss_dssp CCCEEEEEEEEECSTTCCSHHHHHHHHHTTCCCCEECCSSSCCCHHHHBCSCTTSTTCBSCCEEBCCSCSSEECHHHHTC
T ss_pred CCCEEEEeeEEECCCCCCCHHHHHHHHHcCCCcccCCCccccCChhhccCcccccCCCcccceeEEeCCccccCHhhcCC
Confidence 4579999999999998 899999999999999998764 4 65321 13467888864 899888 9
Q ss_pred CccccccCCHHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhh
Q 010896 146 DGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSIT 225 (498)
Q Consensus 146 ~~~~~~~~d~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (498)
++++.+.|||+++|+++++++||+|||+ .++.++..++|||+|++.+.+.... .....+.++.+++...
T Consensus 85 ~~~ea~~mdp~~rL~leaa~eALedAGi---~~~~i~~~~~gV~vG~~~~~~~~~~--------~~~~~~~~~~~~g~~~ 153 (915)
T 2qo3_A 85 SPREAAAMDPQQRLLLETSWELVENAGI---DPHSLRGTATGVFLGVAKFGYGEDT--------AAAEDVEGYSVTGVAP 153 (915)
T ss_dssp CHHHHHTSCHHHHHHHHHHHHHHHHTTC---CGGGGTTBCCEEEEECCCCCTTTTC--------C---CTTCHHHHTTCH
T ss_pred CHHHHHhCCHHHHHHHHHHHHHHHHcCC---ChHHcCCcceEEEEEecCchHHhhh--------cccccccccccccccc
Confidence 9999999999999999999999999999 5567888999999998876654322 1223566777788888
Q ss_pred hhhHHHHHHhhcCCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCC
Q 010896 226 NMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRAS 305 (498)
Q Consensus 226 n~~a~~ia~~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~ 305 (498)
+.++++|++.||++||+++|+++|+||+.||++|+++|++|+||++||||+|.+.+|..+..|..+++++ |++.|
T Consensus 154 ~~~a~ris~~lgl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~~~~~~~~~~ls-----~~g~~ 228 (915)
T 2qo3_A 154 AVASGRISYTMGLEGPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALA-----ADGRS 228 (915)
T ss_dssp HHHHHHHHHHHTBCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHHHHHHHTTTCBC-----SSCCC
T ss_pred cHHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHHHHHHhhhcccC-----CCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998 47899
Q ss_pred CcCCCCCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCE
Q 010896 306 RPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNY 385 (498)
Q Consensus 306 rpfd~~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~ 385 (498)
+|||.+++|+++|||++++|||++++|+++|++||++|+|+++++|+.+...+.|++.++.++|+++|++||++|+||||
T Consensus 229 ~~Fd~~adG~v~gEGagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~p~dId~ 308 (915)
T 2qo3_A 229 KAFGAGADGFGFSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPGDVDA 308 (915)
T ss_dssp CTTBTTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCCGGGCCE
T ss_pred ccccCCCCceeecCceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCcE
Confidence 99999999999999999999999999999999999999999999999988888889999999999999999999999999
Q ss_pred EEccCCCCccCcHHHHHHHHHHhcC----CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCC
Q 010896 386 VNAHATSTLAGDLAEVNAIKKVFKD----TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVT 461 (498)
Q Consensus 386 i~~hgtgt~~~D~~E~~al~~~f~~----~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~ 461 (498)
||+|||||+++|++|..+|.++|+. ..+++++|+|+++||+++|||++++++++++|+++.|||++|+++|||.++
T Consensus 309 ve~HgtgT~~gD~~E~~al~~~f~~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~~ipp~~~~~~~~p~~~ 388 (915)
T 2qo3_A 309 VEAHGTGTALGDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATLHVEEPTPHVD 388 (915)
T ss_dssp EECCCCCCTTTHHHHHHHHHHHTSSSCCTTSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCSSBCTTSC
T ss_pred EEecCCCCccCCHHHHHHHHHHhccccCCCCcccccCcccceeCCccccchHHHHHHHHHHhcCCCCCCCCCCCCCcccc
Confidence 9999999999999999999999985 346899999999999999999999999999999999999999999999998
Q ss_pred cCc----CCCccc----ccCccEEEEEccccccceeeEEEeeCC
Q 010896 462 IDT----VPNVKK----QHHVNVAISNSFGFGGHNSVVVFAPFS 497 (498)
Q Consensus 462 ~~~----v~~~~~----~~~~~~alv~s~G~gG~n~~~vl~~~~ 497 (498)
++. ++.+.+ ...+|+++||||||||+|+|+||++++
T Consensus 389 ~~~~~~~~~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~ 432 (915)
T 2qo3_A 389 WSSGGVALLAGNQPWRRGERTRRAAVSAFGISGTNAHVIVEEAP 432 (915)
T ss_dssp CSSSSEEECSSCEECCSSSSCCEEEEEEECTTSEEEEEEEEECC
T ss_pred cccCceeeecCCcccccCCCCcEEEEeeecCCCceEEEEEeecc
Confidence 753 222222 235789999999999999999999975
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-77 Score=686.00 Aligned_cols=467 Identities=22% Similarity=0.282 Sum_probs=398.8
Q ss_pred ccCccCCcccccCchhhHhhhhCCCCcccccccccCcccccccccccccCCCCcccccccCCCCCCCCCCCCCCCCcEEE
Q 010896 11 LGVVFGNKQVKSNGAASLAQYSGLRPAENFQFASAGITTTIKQSGLICSSGPKCRTIRVMASPTASAPKREKDPKKRIVI 90 (498)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~I 90 (498)
-|+||++++|+.+|+++|.+++|||+++++.|++|++.++...+++.... +..++..+...+........++|+|
T Consensus 1080 t~~~v~~~~i~~~~~~~i~~~tgir~~~~~~fd~~~p~~~~~l~~~~~~~-----~~~~~~~~~~~a~~~~~~~~~~~~I 1154 (1887)
T 2uv8_A 1080 TKEPVDDKDVKAKYETSILEHSGIRLIEPELFNGYNPEKKEMIQEVIVEE-----DLEPFEASKETAEQFKHQHGDKVDI 1154 (1887)
T ss_dssp TCCBCCHHHHHHHHHHHHHHTSSEEECCGGGGTTCCTTSEEEEEEEECSS-----CCCCEEECHHHHHHHHHHHGGGEEE
T ss_pred cCCccchhhhHHHHHHHHHHhcCCCCCCcccCCCCCHHHHHHHHHHHhcc-----cccccccCccchhhHhhcCCCceeE
Confidence 68999999999999999999999999999999999998876666554433 2222222211111112223567888
Q ss_pred EeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccC-CCCCCCC-CCccccccCCHHHHHHHHHHHHHH
Q 010896 91 TGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIR-DFSSKGY-IDGKNDRRLDDCWRYCLVAGRRAL 168 (498)
Q Consensus 91 tG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~-~~d~~~~-i~~~~~~~~d~~~~l~l~aa~~AL 168 (498)
+++ .+.++||++|++|++++.+.. ..++.+++|+|+ +||+.+| |++++.++|||+++|+++++++||
T Consensus 1155 ~~~-------~~~~~~w~~L~~G~~~i~p~~----~~~~~~~aG~i~~~FD~~~fgI~~~ea~~mDp~~~l~L~aa~eAL 1223 (1887)
T 2uv8_A 1155 FEI-------PETGEYSVKLLKGATLYIPKA----LRFDRLVAGQIPTGWNAKTYGISDDIISQVDPITLFVLVSVVEAF 1223 (1887)
T ss_dssp EEC-------TTTSCEEEEECTTCEEEEEEE----ECCSCCEEECCCTTCCTTTTTCCHHHHHHSCHHHHHHHHHHHHHH
T ss_pred eec-------CchHHHHHHHHcCCceeeccc----CCCCccEEEEECCCCChhhcCCCHHHHHhcCHHHHHHHHHHHHHH
Confidence 864 567899999999999999853 245568899997 6999999 999999999999999999999999
Q ss_pred HHCCCC-ccc-ccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHH-hhcCCCCcccc
Q 010896 169 EEASLS-PQV-LENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAI-DTGLMGPNYSI 245 (498)
Q Consensus 169 ~dAG~~-~~~-~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~-~lgl~Gp~~tv 245 (498)
+|||++ +.. ...++..++|||+|++++++..+...+...+. ...++++.++..+.|.++++|++ .||++||+++|
T Consensus 1224 ~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~--~~~v~~~~~~~~~~n~~aa~is~~~lgl~GP~~tv 1301 (1887)
T 2uv8_A 1224 IASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFK--DEPVQNDILQESFINTMSAWVNMLLISSSGPIKTP 1301 (1887)
T ss_dssp HHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTT--TCCCCTTHHHHHSTTHHHHHHHHHTTCCCSCCCCC
T ss_pred HHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHh--cCCCCcchhhcchhhHHHHHHHHHHcCCccceEEe
Confidence 999994 321 12378899999999999998877666554322 24578888888999999999999 59999999999
Q ss_pred ccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccC------CCCCCCCCCcCCCCCCCccccc
Q 010896 246 STACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQR------NEYPKRASRPWDKDRDGFVMGE 319 (498)
Q Consensus 246 ~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~------~~~p~~~~rpfd~~~~G~v~gE 319 (498)
+++|+||+.||+.|++.|++|+||+|||||+|. ++|..+..|..+++++.. +.+|++.|||||..++||++||
T Consensus 1302 ~tACASsl~Al~~A~~~I~sG~advaLvGGvd~-~~~~~~~~f~~m~als~~~~e~~~g~~p~~~~RPfd~~r~Gfv~gE 1380 (1887)
T 2uv8_A 1302 VGACATSVESVDIGVETILSGKARICIVGGYDD-FQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFMEAQ 1380 (1887)
T ss_dssp CCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHTTCBCCHHHHHHTTCCGGGSCCTTBTTCCSBCBBC
T ss_pred ecccccHHHHHHHHHHHHHcCCCCEEEEeeecc-CChHHHHHHHHhhhhccchhhhcccCCCccCcCCCcccCCCccccc
Confidence 999999999999999999999999999999998 789999999999999853 5678999999999999999999
Q ss_pred eeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCC------------------hH------------------
Q 010896 320 GCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSD------------------GL------------------ 363 (498)
Q Consensus 320 GaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~------------------~~------------------ 363 (498)
|||++||+++++|+++|++||++|+|+++++|+.+.+.|.|. ..
T Consensus 1381 Gag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~lt~ar~~~G~gt~ps~~ld~~~r~~ql~~~~~~i~ 1460 (1887)
T 2uv8_A 1381 GAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQIK 1460 (1887)
T ss_dssp EEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCTTCCCSGGGGGGCCCCSCCSSCCGGGCHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEccHHHHHHCCCceEEEEeeeEEecCCccccCCCCCccccccccccccccCCCCcccchHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999876655542 10
Q ss_pred -------------------------HH-------------------------------HHHHHHHHHHcCCCCCCcCEEE
Q 010896 364 -------------------------GV-------------------------------SSCIAKSLEDAGVSPEEVNYVN 387 (498)
Q Consensus 364 -------------------------~~-------------------------------~~~i~~Al~~Agl~~~dId~i~ 387 (498)
.+ .++|++||+++||+++||||||
T Consensus 1461 ~~~~~~~~~l~~~~~~~g~~~~~~~~Qe~~~~i~~~~~~~~~~~~~~~~~~~~~~d~~~~air~ALa~AGl~p~DId~ve 1540 (1887)
T 2uv8_A 1461 DWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVAS 1540 (1887)
T ss_dssp HHHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTTCSSSCHHHHHHHTTTCCGGGEEEEE
T ss_pred HHhhhhhhhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHhhccchhhchHHHHHHHHHHHHcCCCHHHceEEE
Confidence 12 3689999999999999999999
Q ss_pred ccCCCCccCcHHHHHHHHHHhcC-----CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCC-
Q 010896 388 AHATSTLAGDLAEVNAIKKVFKD-----TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVT- 461 (498)
Q Consensus 388 ~hgtgt~~~D~~E~~al~~~f~~-----~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~- 461 (498)
+|||||++||++|.++|.++|++ ..++++++.|+++||++||||++++++++++|++|+||||+|+++|||.++
T Consensus 1541 aHGTgT~~gD~~E~~Al~~~f~~~gr~~~~pl~v~s~KsliGH~~gAAGa~~li~~ll~L~~g~iPpt~n~d~~dp~l~~ 1620 (1887)
T 2uv8_A 1541 FHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQ 1620 (1887)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCGGGHHHHHHHHHHHHHTTCEECCCTTCSSBCGGGGG
T ss_pred ecCCCCcccCHHHHHHHHHHHhhhccCCCCcEEEEecccceechHHHHhHHHHHHHHHHHHhCCcCCcCCCCCCCCcccc
Confidence 99999999999999999999964 246899999999999999999999999999999999999999999999995
Q ss_pred cCcC--CCcccc-cCccEEEEEccccccceeeEEEeeC
Q 010896 462 IDTV--PNVKKQ-HHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 462 ~~~v--~~~~~~-~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
++++ +....+ .++|++++|||||||+|+|+||+++
T Consensus 1621 ~~~l~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p 1658 (1887)
T 2uv8_A 1621 FEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHP 1658 (1887)
T ss_dssp CTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECT
T ss_pred ccccccccccccCCCCCEEEEccCCCCCccEEEEEecC
Confidence 6664 444444 3689999999999999999999986
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-70 Score=656.72 Aligned_cols=463 Identities=20% Similarity=0.267 Sum_probs=393.5
Q ss_pred cCccCCcccccCchhhHhhhhCCCCccc---ccccccCcccccccccccccCCCCcccccccCCCCCCCCCCCCCCCCcE
Q 010896 12 GVVFGNKQVKSNGAASLAQYSGLRPAEN---FQFASAGITTTIKQSGLICSSGPKCRTIRVMASPTASAPKREKDPKKRI 88 (498)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V 88 (498)
|+||+++|||.+|+++|.+|+|||..++ +.|+++++ ..+++...+ ++..+..+++.+..+.....+++
T Consensus 2518 ~~~~~~~~i~~~~~~~i~~~~~ir~~~~~~~~~~~~~~~----~~~~v~~~~-----d~~~~~~s~~~a~~~~~~~~~~~ 2588 (3089)
T 3zen_D 2518 GELVPECEIVERYHDAVVERCGIREFVDDGAIDPDHASP----LLVSVFLDK-----DFTFVVSSEADARAFVQFDPEHT 2588 (3089)
T ss_dssp CCBCCSSHHHHHTHHHHHHHSSEEECCCSSSCCSSSCEE----EEEEEECSS-----CCCCEEECHHHHHHHHTTSTTSE
T ss_pred CCcCCHHHHHHHHHHHHHhcCCeEeeCcccccccCCCCc----cceeeeecC-----CCCcccCCHHHHHHHHHhCCCcc
Confidence 7999999999999999999999999987 48888887 334443333 45555555554555556666778
Q ss_pred EEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccC-CCCCCCC-CCccccccCCHHHHHHHHHHHH
Q 010896 89 VITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIR-DFSSKGY-IDGKNDRRLDDCWRYCLVAGRR 166 (498)
Q Consensus 89 ~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~-~~d~~~~-i~~~~~~~~d~~~~l~l~aa~~ 166 (498)
.|+- ...+++|+.+..|.+++...+ ...++.+++|+|+ +||+.+| |++++++.|||+++|+++++++
T Consensus 2589 ~i~~--------~~~~~~W~~~~~~~~~i~~p~---~~~~~~~~gG~i~d~FD~~~fgIs~rea~~mDp~~rL~l~aa~e 2657 (3089)
T 3zen_D 2589 VARP--------LPDSSDWEVTRKAGTEIRVPR---KTKLSRTVGAQIPTGFDPTVWGISPDMASSIDRVALWNIVATVD 2657 (3089)
T ss_dssp EEEE--------CTTTCCEEEEECTTCEEEEEE---EECCSCCEEECCCTTCCTTTTTCCHHHHHHSCHHHHHHHHHHHH
T ss_pred eEEe--------CCCCcceeeeecCCCCcCCCC---cCCccceEEEEcCCCCChhhcCCCHHHHHhcCHHHHHHHHHHHH
Confidence 8876 355689999999998876433 2235568999995 6999999 9999999999999999999999
Q ss_pred HHHHCCCCccccc-ccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHH-hhcCCCCccc
Q 010896 167 ALEEASLSPQVLE-NMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAI-DTGLMGPNYS 244 (498)
Q Consensus 167 AL~dAG~~~~~~~-~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~-~lgl~Gp~~t 244 (498)
||+|||++++... .++..++|||+|++.|++......+..++. +....++ .++..+.|..++++++ +||++||+++
T Consensus 2658 ALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~aa~is~~~lGl~GPs~t 2735 (3089)
T 3zen_D 2658 AFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLL-GRAKPND-ILQEVLPNVVAAHVMQSYVGGYGAMVH 2735 (3089)
T ss_dssp HHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHT-TCCCCTT-HHHHTSTTHHHHHHHHHTTCCCSCEEC
T ss_pred HHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhc-CCCccch-hhccccccHHHHHHHHHHcCCCCCcee
Confidence 9999999654332 247789999999999998887777766554 3333333 4667788999999997 4699999999
Q ss_pred cccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhcccccc------CCCCCCCCCCcCCCCCCCcccc
Q 010896 245 ISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQ------RNEYPKRASRPWDKDRDGFVMG 318 (498)
Q Consensus 245 v~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~------~~~~p~~~~rpfd~~~~G~v~g 318 (498)
|+++|+||++||++|+++|++|+||++||||+|. ++|..+..|..+++++. ++.+|++.|||||.+++||++|
T Consensus 2736 V~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~-ls~~~~~~f~~~~als~~~~~~~~~~sp~~~crpFd~~~dG~v~G 2814 (3089)
T 3zen_D 2736 PVGACATAAVSVEEGVDKIKLGKADLVIAGGFDD-LTLEAIIGFGDMAATADTEMMRAKGISDSKFSRANDRRRLGFLEA 2814 (3089)
T ss_dssp CBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHHTCBCCHHHHHHTTCCTTTSCCSSBTTCCCBCBB
T ss_pred eccchhhHHHHHHHHHHHHHCCCCCeeEEeeecc-cCHHHHHHHHHhhhhhcchhhhhccCCcccccCccccCCCCEEEe
Confidence 9999999999999999999999999999999999 89999999999998874 3677899999999999999999
Q ss_pred ceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCCh-------HHHHHHHHHHHHHcCCCCCCcCEEEccCC
Q 010896 319 EGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDG-------LGVSSCIAKSLEDAGVSPEEVNYVNAHAT 391 (498)
Q Consensus 319 EGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~-------~~~~~~i~~Al~~Agl~~~dId~i~~hgt 391 (498)
||||++||+++++|+++|++||++|.+.+.++|+.+.+.|.|.. .++.++|++||+++|++++||||||+|||
T Consensus 2815 EGAgavVL~~~e~A~~~G~~I~avI~g~~~n~Dg~~~~~~aP~~g~~~a~~~~q~~ai~~AL~~AGl~p~DIdyVEaHGT 2894 (3089)
T 3zen_D 2815 QGGGTILLARGDLALKMGLPVLAVVGYAQSFADGVHTSIPAPGLGALGAARGGRESTLARSLAQLGVGADDIAVISKHDT 2894 (3089)
T ss_dssp CEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCCCCCSSCCCCGGGGGSTTGGGSHHHHHHHTTTCCGGGEEEEECCCC
T ss_pred ccceEEEEeeHHHHHhCCCceEEEEEEEEEecCCcccCccCCchhHHhHhhhhHHHHHHHHHHHcCCCHHHeeEEEEecC
Confidence 99999999999999999999999999999999999888777752 35567999999999999999999999999
Q ss_pred CCccCcHHHHH---HHHHHhcCC--CcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcC---
Q 010896 392 STLAGDLAEVN---AIKKVFKDT--SEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTID--- 463 (498)
Q Consensus 392 gt~~~D~~E~~---al~~~f~~~--~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~--- 463 (498)
||++||++|.+ ++.++|+.. .+++++|+|+++||++||||++++++++++|++++|||++|++++||.++.+
T Consensus 2895 GT~lgD~~E~~al~al~~~fg~~~~~~~~v~s~Ks~iGH~~gAAG~~~lik~ll~L~~g~iPpt~~~~~~np~i~~~~~~ 2974 (3089)
T 3zen_D 2895 STLANDPNETELHERIADSMGRAPGNPLFIVSQKTLTGHAKGGAAVFQMMGLCQILRDGVIPPNRSLDCVDDELATSGHF 2974 (3089)
T ss_dssp CCTTHHHHHHHHHHHHHHHTTCCTTCCEEEECSHHHHCBCSTTHHHHHHHHHHHHHHHCCBCCCTTCSSBCGGGGGCSSE
T ss_pred CcccccHHHHHHHHHHHHHhCccCCCcceecccccccCCchhhhhHHHHHHHHHHHhcCccCCCCCCCCCCCCccccCCe
Confidence 99999999999 788899863 5799999999999999999999999999999999999999999999998711
Q ss_pred cCCCccc----ccCccEEEEEccccccceeeEEEeeCC
Q 010896 464 TVPNVKK----QHHVNVAISNSFGFGGHNSVVVFAPFS 497 (498)
Q Consensus 464 ~v~~~~~----~~~~~~alv~s~G~gG~n~~~vl~~~~ 497 (498)
.++.... ..++|++++|||||||+|+|+||++++
T Consensus 2975 ~~~~~~~~w~~~~~~r~a~vnSfGfGG~NahvVle~~~ 3012 (3089)
T 3zen_D 2975 VWVREPLDLRGKFPLKAGLVTSLGFGHVSGLVALVHPE 3012 (3089)
T ss_dssp EECSSCBCCCTTSCCCEEEEEEEETTTEEEEEEEECGG
T ss_pred eecCCCccCCCCCCCCEEEEccccCCCCeEEEEEecCc
Confidence 1222222 335799999999999999999999874
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-38 Score=323.68 Aligned_cols=267 Identities=21% Similarity=0.303 Sum_probs=216.5
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
++|+++++++||+|||++ +++++ ++++|+..+... ....+.++++.+
T Consensus 31 ~~L~~~a~~~Al~dAGl~---~~~id----~v~~g~~~~~~~--------------------------~~~~a~~ia~~l 77 (397)
T 1wl4_A 31 QDLGSTVIKEVLKRATVA---PEDVS----EVIFGHVLAAGC--------------------------GQNPVRQASVGA 77 (397)
T ss_dssp HHHHHHHHHHHHHHHTCC---GGGCC----EEEEECSCCTTS--------------------------CSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCC---HHHCC----EEEEEecCCCCC--------------------------CCHHHHHHHHHc
Confidence 589999999999999994 44555 688887543211 134688999999
Q ss_pred cC--CCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hhhH--------------H-----H----H--
Q 010896 237 GL--MGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PTGV--------------G-----G----F-- 288 (498)
Q Consensus 237 gl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~~~--------------~-----~----~-- 288 (498)
|+ +||+++|+++|+|++.||+.|+++|++|++|++||||+|.+.. |... . + |
T Consensus 78 gl~~~~p~~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 157 (397)
T 1wl4_A 78 GIPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHN 157 (397)
T ss_dssp TCCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECCCSSCCSSSCCCCEEHHHHHTTBCTTTC
T ss_pred CCCCCccEEEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccccccCcccccchhccccccCcccc
Confidence 99 8999999999999999999999999999999999999998542 2110 0 0 0
Q ss_pred hhccccc----------------------------------------------------cCCCCCCC--------CCCc-
Q 010896 289 IACRALS----------------------------------------------------QRNEYPKR--------ASRP- 307 (498)
Q Consensus 289 ~~~~~ls----------------------------------------------------~~~~~p~~--------~~rp- 307 (498)
..++.++ ..++.+.. .|||
T Consensus 158 ~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpv 237 (397)
T 1wl4_A 158 CHMGITAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDEFPRHGSNIEAMSKLKPY 237 (397)
T ss_dssp CBHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHTSCCS
T ss_pred chHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCCCceeeccccccCCCCCHHHHhcCCCc
Confidence 1112111 01111111 5899
Q ss_pred CCCCCCCcc-------ccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCC
Q 010896 308 WDKDRDGFV-------MGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSP 380 (498)
Q Consensus 308 fd~~~~G~v-------~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~ 380 (498)
||.+++|++ ++||++++||++++.|+++|++|+++|+|++.+++ .|.+.+.++..+++++|+++|+++
T Consensus 238 fd~~~~G~vt~~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~ 312 (397)
T 1wl4_A 238 FLTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGV-----EPSIMGIGPIPAIKQAVTKAGWSL 312 (397)
T ss_dssp SCCSSCCCCCTTSBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCG
T ss_pred cCCCCCCCEechhcCCccchhheeeEecHHHHHHcCCCccEEEEEEEEeec-----ChhhccchHHHHHHHHHHHcCCCH
Confidence 999999999 99999999999999999999999999999999873 455566777899999999999999
Q ss_pred CCcCEEEccCCCCccCcHHHHHH--HHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCC
Q 010896 381 EEVNYVNAHATSTLAGDLAEVNA--IKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLE 457 (498)
Q Consensus 381 ~dId~i~~hgtgt~~~D~~E~~a--l~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~ 457 (498)
+||||||.| |.+|..+ +.+.|+- ..++++++.|.++||++||+|+.++++++++|+++
T Consensus 313 ~dId~ie~~-------d~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~------------ 373 (397)
T 1wl4_A 313 EDVDIFEIN-------EAFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLERM------------ 373 (397)
T ss_dssp GGCCEEEEC-------CSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH------------
T ss_pred HHCCEEEEe-------cccHHHHHHHHHHcCCCCcCcCCCcCccccCCChhhhHHHHHHHHHHHHhhc------------
Confidence 999999988 7777755 7778875 34789999999999999999999999999999884
Q ss_pred CCCCcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 458 PEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 458 ~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
+.++++++.++.||.+.++||++
T Consensus 374 ---------------~~~~gl~~~~~ggG~~~a~~~e~ 396 (397)
T 1wl4_A 374 ---------------GRSRGVAALCIGGGMGIAMCVQR 396 (397)
T ss_dssp ---------------TCCEEEEEEEETTTEEEEEEEEE
T ss_pred ---------------CCCEEEEEEecccchheEEEEEe
Confidence 23688888888899999999987
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-37 Score=316.21 Aligned_cols=271 Identities=19% Similarity=0.247 Sum_probs=216.2
Q ss_pred HHHHHHHHHHHHHHHC-CCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHH
Q 010896 156 CWRYCLVAGRRALEEA-SLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAI 234 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dA-G~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~ 234 (498)
.++|+++++++||+|| |+++ ++++ +|++|+..+... ..+..+.++++
T Consensus 30 ~~~L~~~a~~~AL~dA~gl~~---~~id----~v~~g~~~~~~~-------------------------~~~~~a~~ia~ 77 (390)
T 1wdk_C 30 AEDMSAHLISKVLERNSKVDP---GEVE----DVIWGCVNQTLE-------------------------QGWNIARMASL 77 (390)
T ss_dssp HHHHHHHHHHHHHHHCTTSCG---GGEE----EEEEECSSBSBT-------------------------TTTTHHHHHHT
T ss_pred HHHHHHHHHHHHHHhccCCCH---HHCC----EEEEEeeccccC-------------------------CCCcHHHHHHH
Confidence 4589999999999999 9943 4444 789987543221 12457889999
Q ss_pred hhcC--CCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hhhHHHH-----h--------hccc-----
Q 010896 235 DTGL--MGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PTGVGGF-----I--------ACRA----- 293 (498)
Q Consensus 235 ~lgl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~~~~~~-----~--------~~~~----- 293 (498)
.||+ +||+++|+++|+|++.||+.|+++|++|++|++||||+|.+.. |.....| . .++.
T Consensus 78 ~lgl~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~g~~a~~~ 157 (390)
T 1wdk_C 78 MTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPHMSLYAAKASGMMGLTAEML 157 (390)
T ss_dssp TSSSCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTBCCCGGGGGTSCGGGGSHHHHHHHH
T ss_pred HcCCCCCccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCcccccccCccccccCCcchhHHHHHHHHH
Confidence 9999 8999999999999999999999999999999999999997532 3211000 0 0111
Q ss_pred -----cccC----------------------CC--CC------CCCCCcCCCC---------------------CCCcc-
Q 010896 294 -----LSQR----------------------NE--YP------KRASRPWDKD---------------------RDGFV- 316 (498)
Q Consensus 294 -----ls~~----------------------~~--~p------~~~~rpfd~~---------------------~~G~v- 316 (498)
++.. ++ .| .+.++|||.+ ++|++
T Consensus 158 ~~~~g~s~e~~~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~~~~~~~fd~d~~~r~~~t~e~~~~~~~i~~p~~G~vt 237 (390)
T 1wdk_C 158 GKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVT 237 (390)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCCEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCCCC
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHhcCCcccceeeeeeccCCCcceeeccccccCCCCCHHHHhcCCCcccCCCCcEe
Confidence 1210 00 02 1223799988 79999
Q ss_pred ------ccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccC
Q 010896 317 ------MGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHA 390 (498)
Q Consensus 317 ------~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hg 390 (498)
++||++++||+++++|+++|++++++|+|++.+++ .|.+.+.++..+++++|+++|++++||||||+|.
T Consensus 238 ~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~dId~ve~~d 312 (390)
T 1wdk_C 238 AGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGV-----DPAIMGYGPVPATQKALKRAGLNMADIDFIELNE 312 (390)
T ss_dssp GGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECC
T ss_pred chhcCcccchhheeEEecHHHHHHcCCCccEEEEEEEEecc-----ChhhcchhHHHHHHHHHHHcCCChhhCcEEEecc
Confidence 99999999999999999999999999999999874 3445566778999999999999999999999998
Q ss_pred CCCccCcHHHHHHHHHHhcCC----CcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCC
Q 010896 391 TSTLAGDLAEVNAIKKVFKDT----SEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVP 466 (498)
Q Consensus 391 tgt~~~D~~E~~al~~~f~~~----~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~ 466 (498)
++|. |..++.+.|+-. .++++++.|.++||++||+|+.++++++++|+++
T Consensus 313 ~f~~-----~~~~~~~~lg~~~~~~~~vn~~gg~~~~GHp~gasG~~~~~~~~~~L~~~--------------------- 366 (390)
T 1wdk_C 313 AFAA-----QALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQN--------------------- 366 (390)
T ss_dssp SBHH-----HHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT---------------------
T ss_pred CCHH-----HHHHHHHHcCCCCCCCCcCCCCcCcccccCCcchhHHHHHHHHHHHHhhc---------------------
Confidence 7753 666777788742 3688999999999999999999999999999984
Q ss_pred CcccccCccEEEEEccccccceeeEEEee
Q 010896 467 NVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 467 ~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
+.+++++++.+.||.+.++||++
T Consensus 367 ------~~~~gl~~~~~ggG~~~a~~~~~ 389 (390)
T 1wdk_C 367 ------GGTFGLSTMCIGLGQGIATVFER 389 (390)
T ss_dssp ------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred ------CCCEEEEEecccchheEEEEEEe
Confidence 23677888888899999999986
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=311.22 Aligned_cols=270 Identities=19% Similarity=0.246 Sum_probs=212.4
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
..+|+++++++||+|||++ +++++ +|++|+..+... ..+..+.++++.
T Consensus 26 ~~~L~~~Aa~~Al~dAgl~---~~~id----~v~~g~~~~~~~-------------------------~~~~~a~~va~~ 73 (401)
T 1ulq_A 26 PDDLLAHALSVLVDRSGVP---KEEVE----DVYAGCANQAGE-------------------------DNRNVARMALLL 73 (401)
T ss_dssp HHHHHHHHHHHHHHHHTCC---GGGCC----EEEEECSCCSST-------------------------TTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCC---HHHCC----EEEEEecccCCC-------------------------CCChHHHHHHHH
Confidence 3479999999999999994 44555 799987543211 024578899999
Q ss_pred hcC--CCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hhh--------------H----------HHH
Q 010896 236 TGL--MGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PTG--------------V----------GGF 288 (498)
Q Consensus 236 lgl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~~--------------~----------~~~ 288 (498)
+|+ ++|+++|+++|+|++.||+.|+++|++|++|++||+|+|.+.. |.. + .+|
T Consensus 74 lGl~~~~p~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 153 (401)
T 1ulq_A 74 AGFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPK 153 (401)
T ss_dssp TTCCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHH
T ss_pred hCCCCCccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhccccccc
Confidence 999 7899999999999999999999999999999999999997543 320 0 112
Q ss_pred h--h-----cccc---------------------cc----------C-C----------------CCCCC----------
Q 010896 289 I--A-----CRAL---------------------SQ----------R-N----------------EYPKR---------- 303 (498)
Q Consensus 289 ~--~-----~~~l---------------------s~----------~-~----------------~~p~~---------- 303 (498)
. . ++.+ +. . . .++++
T Consensus 154 ~p~~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~~~~~~~~d~~~r~~~t~e~ 233 (401)
T 1ulq_A 154 MQALYGTESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRRDTSLEK 233 (401)
T ss_dssp HHHHSCCCCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHH
T ss_pred cccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCCCCceeeccccccCCCCCHHH
Confidence 1 0 1110 00 0 0 00112
Q ss_pred --CCCc-CCCCCCCcc-------ccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHH
Q 010896 304 --ASRP-WDKDRDGFV-------MGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSL 373 (498)
Q Consensus 304 --~~rp-fd~~~~G~v-------~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al 373 (498)
.+|| ||. +|++ ++||++++||+++++|+++|.+++++|+|++.+++. |...+.+...+++++|
T Consensus 234 ~~~~rpif~~--~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~a~~~al 306 (401)
T 1ulq_A 234 LAALRPVFRE--GGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVP-----PRIMGIGPVPATRKAL 306 (401)
T ss_dssp HHHSCBSSST--TCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECC-----GGGGGGTHHHHHHHHH
T ss_pred HhhCCCccCC--CCCeechhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCC-----ccccchhHHHHHHHHH
Confidence 3567 775 7888 799999999999999999999999999999999863 3334556689999999
Q ss_pred HHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhc---CCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCC
Q 010896 374 EDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFK---DTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPT 450 (498)
Q Consensus 374 ~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~---~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~ 450 (498)
+++|++++||||||+|.+.+. .|...++. |+ +..++++++.|..+||+.||+|+.++++++++|+++
T Consensus 307 ~~Agl~~~dId~ie~heafa~----~~l~~~~~-lg~~~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~----- 376 (401)
T 1ulq_A 307 ERAGLSFSDLGLIELNEAFAA----QALAVLRE-WSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRR----- 376 (401)
T ss_dssp HHTTCCGGGCSEEEECCSBHH----HHHHHHHH-HTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT-----
T ss_pred HHcCCCHHHcCEEEEecchHH----HHHHHHHH-cCCCCCCCccCCCCcccccCCCcchHHHHHHHHHHHHHhhc-----
Confidence 999999999999999977764 35555543 44 235788999999999999999999999999999985
Q ss_pred CCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEeeC
Q 010896 451 LNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 451 ~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
+.+++++++|++||.|.++||+++
T Consensus 377 ----------------------~~~~gl~~~~~ggG~~~a~v~~~~ 400 (401)
T 1ulq_A 377 ----------------------KVQFGLATMCIGVGQGIAVVVEGM 400 (401)
T ss_dssp ----------------------TCSEEEEEEEETTTEEEEEEEEEC
T ss_pred ----------------------CCCEEEEEeecCCcccEEEEEEeC
Confidence 347899999999999999999975
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=311.89 Aligned_cols=268 Identities=20% Similarity=0.269 Sum_probs=212.1
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
..+|+++++++||+|||++ +++++ ++++|+..+.. .....+.++++.
T Consensus 27 ~~~L~~~a~~~Al~dAgl~---~~~id----~~~~g~~~~~~--------------------------~~~~~a~~ia~~ 73 (392)
T 2vu1_A 27 AHELGATVISAVLERAGVA---AGEVN----EVILGQVLPAG--------------------------EGQNPARQAAMK 73 (392)
T ss_dssp HHHHHHHHHHHHHHHHTCC---GGGCC----EEEEECSCCTT--------------------------SCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCC---HHHCC----EEEEEecCCCC--------------------------CCcHHHHHHHHH
Confidence 4589999999999999994 44555 56777543211 012467899999
Q ss_pred hcCC--CCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hhh----H-------HHHh------------
Q 010896 236 TGLM--GPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PTG----V-------GGFI------------ 289 (498)
Q Consensus 236 lgl~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~~----~-------~~~~------------ 289 (498)
+|++ ||+++|+++|+|++.||+.|+++|++|++|++||||+|.+.. |.. . ..+.
T Consensus 74 lgl~~~~p~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (392)
T 2vu1_A 74 AGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFY 153 (392)
T ss_dssp TTCCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCTTCCCSSCEEEEEHHHHHHTBCTTT
T ss_pred cCCCCCceEEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCccccccccccccCcccccchhhhcccccccc
Confidence 9999 999999999999999999999999999999999999997532 220 0 0000
Q ss_pred --hcccc----------cc----------------------CCC--CC-----CCCCCcCCCC-----------------
Q 010896 290 --ACRAL----------SQ----------------------RNE--YP-----KRASRPWDKD----------------- 311 (498)
Q Consensus 290 --~~~~l----------s~----------------------~~~--~p-----~~~~rpfd~~----------------- 311 (498)
.++.+ +. .++ .| .+.|+|||.+
T Consensus 154 ~~~~~~~a~~~~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~f~~d~~~r~~~t~e~~~~~~~ 233 (392)
T 2vu1_A 154 GYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRP 233 (392)
T ss_dssp CCBHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTCCEEECSCSSCCTTCCHHHHHTCCC
T ss_pred cchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccCCCceeeccccccCCCCCHHHHhcCCC
Confidence 01111 10 000 01 1237899987
Q ss_pred ---CCCcc-------ccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 010896 312 ---RDGFV-------MGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPE 381 (498)
Q Consensus 312 ---~~G~v-------~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~ 381 (498)
++|++ ++||++++||+++++|+++|.+++++|+|++.+++ .|.+.+.++..+++++|+++|++++
T Consensus 234 v~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~a~~~al~~agl~~~ 308 (392)
T 2vu1_A 234 AFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGV-----DPKVMGTGPIPASRKALERAGWKIG 308 (392)
T ss_dssp SSCTTCCCCSSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGG
T ss_pred ccCCCCCeeCcccCCccChhheeeEecHHHHHhcCCCccEEEEEEEEeec-----ChhhcchhHHHHHHHHHHHcCCCHH
Confidence 78999 99999999999999999999999999999999873 3455566778999999999999999
Q ss_pred CcCEEEccCCCCccCcHHHHHHH--HHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCC
Q 010896 382 EVNYVNAHATSTLAGDLAEVNAI--KKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEP 458 (498)
Q Consensus 382 dId~i~~hgtgt~~~D~~E~~al--~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~ 458 (498)
||||||.| |.+|..++ .+.|+- ..++++++.|.++||++||+|+.++++++++|+++
T Consensus 309 dId~ie~~-------d~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~------------- 368 (392)
T 2vu1_A 309 DLDLVEAN-------EAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRR------------- 368 (392)
T ss_dssp GCSEEEEC-------CSBHHHHHHHHHHHCCCGGGBSTTCCHHHHCCCGGGHHHHHHHHHHHHHHHH-------------
T ss_pred HcCEEEec-------cccHHHHHHHHHHcCCCcccCCCCccHhhhCCChhhHHHHHHHHHHHHHhcc-------------
Confidence 99999998 88888774 677774 34789999999999999999999999999999884
Q ss_pred CCCcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 459 EVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 459 ~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
+.++++++..+-||.+.++||++
T Consensus 369 --------------~~~~gl~~~~~ggG~~~a~~~e~ 391 (392)
T 2vu1_A 369 --------------GARKGLATLCIGGGMGVAMCIES 391 (392)
T ss_dssp --------------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred --------------CCCEEEEEEecccchheEEEEEe
Confidence 23678877655589999999986
|
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-35 Score=305.87 Aligned_cols=271 Identities=18% Similarity=0.261 Sum_probs=211.2
Q ss_pred HHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhh
Q 010896 157 WRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDT 236 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~l 236 (498)
.+|+++++++||+|||++ +++++ +|++|+..+... ..+..+.++++.|
T Consensus 56 ~~La~~Aa~~AL~dAGl~---~~~Id----~vi~g~~~~~~~-------------------------~~~~~a~~va~~l 103 (442)
T 2wu9_A 56 DDLLAPVLRALIEKTNLN---PSEVG----DIVVGTVLAPGS-------------------------QRASECRMAAFYA 103 (442)
T ss_dssp HHHHHHHHHHHHHHHTCC---GGGCC----CEEEECCSSBHH-------------------------HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCC---HHHCC----EEEEEeecCccC-------------------------CCChHHHHHHHHc
Confidence 489999999999999994 44555 588987543210 1245688999999
Q ss_pred cC--CCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hh---------hHH-HHh-----hc-------
Q 010896 237 GL--MGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PT---------GVG-GFI-----AC------- 291 (498)
Q Consensus 237 gl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~---------~~~-~~~-----~~------- 291 (498)
|+ ++|+++|+++|+|++.||+.|+++|++|++|++||+|+|.+.. |. .+. .|. .+
T Consensus 104 Gl~~~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~mg~~A~~~ 183 (442)
T 2wu9_A 104 GFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSENV 183 (442)
T ss_dssp TCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCSCCCGGGGGCHHHHHTTSCHHHHHHHH
T ss_pred CCCCCceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccchhhhhccccccchhHHHHHHHHH
Confidence 99 7999999999999999999999999999999999999997533 21 000 110 00
Q ss_pred ----------------------------cccccC---------C----------CCCCC------------CCCc-CCCC
Q 010896 292 ----------------------------RALSQR---------N----------EYPKR------------ASRP-WDKD 311 (498)
Q Consensus 292 ----------------------------~~ls~~---------~----------~~p~~------------~~rp-fd~~ 311 (498)
+.+... + .+.++ .+|| ||.
T Consensus 184 ~~~~gisre~~~~~A~~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~~~rpvfd~- 262 (442)
T 2wu9_A 184 AQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKK- 262 (442)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHHTSCCSSCT-
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHhChhcccccccccceeeccccccccccCceeeecccCcCCCCCHHHHhcCCCccCC-
Confidence 011100 0 00011 4456 775
Q ss_pred CCCcc-------ccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcC
Q 010896 312 RDGFV-------MGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVN 384 (498)
Q Consensus 312 ~~G~v-------~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId 384 (498)
+|++ ++||++++||++++.|+++|.+|+++|+|++.+++ .|...+.+...+++++|++||++++|||
T Consensus 263 -~G~vt~~n~s~~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~A~~~Al~~AGl~~~DId 336 (442)
T 2wu9_A 263 -DGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGV-----DPAIMGIGPAVAIPAAVKAAGLELDDID 336 (442)
T ss_dssp -TCCCCGGGBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEEC-----CGGGGGGHHHHHHHHHHHHTTCCGGGCC
T ss_pred -CCCeechhcCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecC-----CchhcchHHHHHHHHHHHHcCCCHHHCC
Confidence 6888 69999999999999999999999999999999886 2444466778999999999999999999
Q ss_pred EEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcC
Q 010896 385 YVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTID 463 (498)
Q Consensus 385 ~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~ 463 (498)
|||+|+++|. .|..+++ .|+- ..++++++.+..+||++||+|+.++++++++|+++. |
T Consensus 337 ~iE~h~aft~----~~l~~~~-~lG~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~v~~Lr~~~-~--------------- 395 (442)
T 2wu9_A 337 LFEINEAFAS----QFVYCRN-KLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRG-K--------------- 395 (442)
T ss_dssp EEEECCSBHH----HHHHHHH-HHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHC-T---------------
T ss_pred EEEEeCCChH----HHHHHHH-HhCCCCCCcCCCccHhhcCCchhHHHHHHHHHHHHHHhccC-C---------------
Confidence 9999999986 4776664 4553 346788888889999999999999999999999863 0
Q ss_pred cCCCcccccCccEEEE-EccccccceeeEEEeeCC
Q 010896 464 TVPNVKKQHHVNVAIS-NSFGFGGHNSVVVFAPFS 497 (498)
Q Consensus 464 ~v~~~~~~~~~~~alv-~s~G~gG~n~~~vl~~~~ 497 (498)
+.+++++ +++| ||.|+++||+++.
T Consensus 396 ---------~~~~glas~~~G-GG~~~a~v~~~~~ 420 (442)
T 2wu9_A 396 ---------DCRFGVVSMCIG-TGMGAAAVFERGD 420 (442)
T ss_dssp ---------TCCEEEEEEEET-TTEEEEEEEEECS
T ss_pred ---------CCCEEEEEeecc-cchheEEEEEecc
Confidence 3478885 5678 9999999999863
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=296.37 Aligned_cols=265 Identities=19% Similarity=0.296 Sum_probs=204.2
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
.++|+++++++||+|||++ +++++ ++++|+..+.. ..+..+.++++.
T Consensus 32 ~~~l~~~a~~~Al~dAgl~---~~~id----~~~~g~~~~~~--------------------------~~~~~a~~va~~ 78 (395)
T 2ib8_A 32 ATKLGSIAIQGAIEKAGIP---KEEVK----EAYMGNVLQGG--------------------------EGQAPTRQAVLG 78 (395)
T ss_dssp HHHHHHHHHHHHHHHHTCC---GGGCC----EEEEECSCCTT--------------------------SCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCC---HHHCC----EEEEEeccCCC--------------------------CCchHHHHHHHH
Confidence 3579999999999999994 44555 56777643211 123367899999
Q ss_pred hcC--CCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hhh------------------HHH-------
Q 010896 236 TGL--MGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PTG------------------VGG------- 287 (498)
Q Consensus 236 lgl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~~------------------~~~------- 287 (498)
+|+ +||+++|+++|+|++.||+.|+++|++|++|++||||+|.+.. |.. +..
T Consensus 79 lgl~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (395)
T 2ib8_A 79 AGLPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNK 158 (395)
T ss_dssp TTCCTTCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECSSBCCTTCEEEEEHHHHHTTEETTTT
T ss_pred cCCCCCceEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccCCccccccccccccccccccccccccccccccc
Confidence 999 8999999999999999999999999999999999999997433 110 000
Q ss_pred ----------HhhccccccC-----------------------C----------------CCCCCCCCc--CCC------
Q 010896 288 ----------FIACRALSQR-----------------------N----------------EYPKRASRP--WDK------ 310 (498)
Q Consensus 288 ----------~~~~~~ls~~-----------------------~----------------~~p~~~~rp--fd~------ 310 (498)
....+ ++.. . ...++.+|+ ||.
T Consensus 159 ~~m~~~a~~~~~~~g-~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~~~p~~~~~~D~~~r~~~~~~l~~l~~ 237 (395)
T 2ib8_A 159 IHMGSCAENTAKKLN-IARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKGQPDVVVKEDEEYKRVDFSKVPKLKT 237 (395)
T ss_dssp EEHHHHHHHHHHHHT-CCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCTTSCCEEECSCSGGGSCCTTTGGGSCC
T ss_pred chHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHhcccccCcccceeeeeecccCCcceeeccccccccCCHHHHhcCCc
Confidence 01111 0000 0 001222332 555
Q ss_pred ---CCCCcc-------ccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCC
Q 010896 311 ---DRDGFV-------MGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSP 380 (498)
Q Consensus 311 ---~~~G~v-------~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~ 380 (498)
+++|++ ++||++++||++++.|+++|++||++|+|++.++ +.|...+.++..+++++|+++|+++
T Consensus 238 ~f~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~-----~~p~~~~~~~~~a~~~al~~Agl~~ 312 (395)
T 2ib8_A 238 VFQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAA-----VEPIDFPIAPVYAASMVLKDVGLKK 312 (395)
T ss_dssp TTCSSSCCCCTTTBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEE-----CCGGGGGGHHHHHHHHHHHHHTCCG
T ss_pred cccCCCCCcccccCCccccceeEEEEecHHHHHhcCCCccEEEEEEEEec-----cChhhccccHHHHHHHHHHHcCCCH
Confidence 668999 9999999999999999999999999999999875 3444456678899999999999999
Q ss_pred CCcCEEEccCCCCccCcHHHHHHHHHH--hcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCC
Q 010896 381 EEVNYVNAHATSTLAGDLAEVNAIKKV--FKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLE 457 (498)
Q Consensus 381 ~dId~i~~hgtgt~~~D~~E~~al~~~--f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~ 457 (498)
+||||||.| |.+|..+|..+ |+- ..++++++.|.++||+.||+|+.++++++++|+++
T Consensus 313 ~dId~ie~~-------D~f~~~~l~~~e~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~------------ 373 (395)
T 2ib8_A 313 EDIAMWEVN-------EAFSLVVLANIKMLEIDPQKVNINGGAVSLGHPIGMSGARIVGHLTHALKQG------------ 373 (395)
T ss_dssp GGEEEEEEC-------CSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHSCTT------------
T ss_pred HHcCEEEEc-------cccHHHHHHHHHHcCCCccccCCCcchhhcCCChhHHHHHHHHHHHHHHhhC------------
Confidence 999999987 99999998877 764 34789999999999999999999999999999761
Q ss_pred CCCCcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 458 PEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 458 ~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
++.+++..+-||...++||++
T Consensus 374 -----------------~~gl~~~~~ggG~g~a~~~~~ 394 (395)
T 2ib8_A 374 -----------------EYGLASICNGGGGASAMLIQK 394 (395)
T ss_dssp -----------------CEEEEEEEETTTEEEEEEEEE
T ss_pred -----------------CceEEEEecccCHhheEEEEc
Confidence 234554555567778888886
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-34 Score=295.22 Aligned_cols=267 Identities=16% Similarity=0.214 Sum_probs=204.5
Q ss_pred HHHHHHHHHHHHHHCC----CCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHH
Q 010896 157 WRYCLVAGRRALEEAS----LSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALL 232 (498)
Q Consensus 157 ~~l~l~aa~~AL~dAG----~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~i 232 (498)
.+|+++++++||+||| ++ ++++| +|++|+..+. ...+..+.++
T Consensus 36 ~~La~~Aa~~Al~~Ag~~~~l~---~~~id----~v~~g~~~~~--------------------------~~~~~~a~~v 82 (393)
T 1afw_A 36 DYLLYNFLNEFIGRFPEPLRAD---LNLIE----EVACGNVLNV--------------------------GAGATEHRAA 82 (393)
T ss_dssp HHHHHHHHHHHHHTSCHHHHTC---GGGCC----CEEEECSSSB--------------------------GGGHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCCC---HHHCC----EEEEEecCCC--------------------------CCCChHHHHH
Confidence 4799999999999999 94 44555 5888875332 1235678899
Q ss_pred HHhhcC--CCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hhh-----------H--HHH-----hhc
Q 010896 233 AIDTGL--MGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PTG-----------V--GGF-----IAC 291 (498)
Q Consensus 233 a~~lgl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~~-----------~--~~~-----~~~ 291 (498)
++.+|+ ++|+++|+++|+|++.||+.|+++|++|++|++||+|+|.+.. |.. + .+| ..+
T Consensus 83 a~~lGl~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~ 162 (393)
T 1afw_A 83 CLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPM 162 (393)
T ss_dssp HHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCH
T ss_pred HHHcCCCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCcccccccccccchhhhhcccccccchhH
Confidence 999999 7999999999999999999999999999999999999997432 210 0 000 011
Q ss_pred ccccc-----CC----------------------------------------CCCCC------------CCCc-CCCCCC
Q 010896 292 RALSQ-----RN----------------------------------------EYPKR------------ASRP-WDKDRD 313 (498)
Q Consensus 292 ~~ls~-----~~----------------------------------------~~p~~------------~~rp-fd~~~~ 313 (498)
+.++. ++ .++++ .+|| ||.++
T Consensus 163 ~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvf~~~~- 241 (393)
T 1afw_A 163 GITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDGSICQSDEGPRPNVTAESLSSIRPAFIKDR- 241 (393)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTTSCEECSCSSCCSCCCHHHHHHCCBSCC----
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccCCceeccccccCCCCCHHHHhcCCCcccCCC-
Confidence 11100 00 01222 3457 87655
Q ss_pred Ccc-------ccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEE
Q 010896 314 GFV-------MGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYV 386 (498)
Q Consensus 314 G~v-------~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i 386 (498)
|++ ++||++++||+++++|+++|++|+++|+|++.++|. |...+.+...+++++|+++|++++|||||
T Consensus 242 G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~a~~~al~~Agl~~~dId~v 316 (393)
T 1afw_A 242 GTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVP-----PEIMGVGPAYAIPKVLEATGLQVQDIDIF 316 (393)
T ss_dssp CCCBTTTBCCBEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECC-----GGGGGGHHHHHHHHHHHHHTCCGGGCSEE
T ss_pred CCeechhcCcccchhheeeEecHHHHHHcCCCccEEEEEEEEeccC-----hhhcchhHHHHHHHHHHHcCCCHHHCCEE
Confidence 777 799999999999999999999999999999999873 34445677899999999999999999999
Q ss_pred EccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcC
Q 010896 387 NAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTV 465 (498)
Q Consensus 387 ~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v 465 (498)
|+|+++|. .|...++ .|+- ..++++++.+..+||++||+|+.++++++++|+++-
T Consensus 317 e~h~~ft~----~~l~~~~-~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~~------------------- 372 (393)
T 1afw_A 317 EINEAFAA----QALYCIH-KLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKKDQ------------------- 372 (393)
T ss_dssp EECCSBHH----HHHHHHH-HHTCCGGGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCTTC-------------------
T ss_pred EEeccCHH----HHHHHHH-HhCCCCcCcCCCCChhhcCCchhhHHHHHHHHHHHHHhhcC-------------------
Confidence 99999885 4666554 3553 346888899999999999999999999999998841
Q ss_pred CCcccccCccEEEEEccccccceeeEEEeeC
Q 010896 466 PNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 466 ~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
. .+++..+-||...++||+++
T Consensus 373 ---------~-gl~~~c~ggg~g~a~~~~~~ 393 (393)
T 1afw_A 373 ---------I-GVVSMCIGTGMGAAAIFIKE 393 (393)
T ss_dssp ---------E-EEEEEEETTTEEEEEEEEEC
T ss_pred ---------C-cEEEEeecccceEEEEEEeC
Confidence 0 45555555788888998863
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-34 Score=291.56 Aligned_cols=270 Identities=19% Similarity=0.310 Sum_probs=211.4
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+++++++||+|+|++ ++++| ++++|+..+. ......+.+++..
T Consensus 31 ~~~L~~~A~~~AL~~agl~---~~dId----~vi~g~~~~~--------------------------~~~~~~a~~v~~~ 77 (396)
T 4dd5_A 31 AVELGVTAAKEAIKRANIT---PDMID----ESLLGGVLTA--------------------------GLGQNIARQIALG 77 (396)
T ss_dssp HHHHHHHHHHHHHHHTTCC---GGGCC----EEEEECSCCT--------------------------TSCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCC---HHHCC----EEEEEeecCC--------------------------CCCchHHHHHHHH
Confidence 3579999999999999994 45566 6888874321 1123467789999
Q ss_pred hcC--CCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHH---------------------------
Q 010896 236 TGL--MGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVG--------------------------- 286 (498)
Q Consensus 236 lgl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~--------------------------- 286 (498)
+|+ ++|+++|+++|+|++.||+.|+++|++|++|.+||+|+|.+..+....
T Consensus 78 lGl~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (396)
T 4dd5_A 78 AGIPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIF 157 (396)
T ss_dssp TTCCTTSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETT
T ss_pred cCCCCCceEEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhccccccc
Confidence 999 579999999999999999999999999999999999999754311000
Q ss_pred -----H-------------------H---hhc--------ccccc----------C---CCCCCCCCCc-----------
Q 010896 287 -----G-------------------F---IAC--------RALSQ----------R---NEYPKRASRP----------- 307 (498)
Q Consensus 287 -----~-------------------~---~~~--------~~ls~----------~---~~~p~~~~rp----------- 307 (498)
+ | +.. +.+.. + -.+|++.+|+
T Consensus 158 ~~~~~~~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~ 237 (396)
T 4dd5_A 158 NNYHMGITAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGDTVVDKDEYIKPGTTMEKLAKLR 237 (396)
T ss_dssp TTEEHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----CEEECSCSCCCTTCCHHHHHHCC
T ss_pred ccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCCCceeecCcccccCCCCHHHHhhCC
Confidence 0 0 000 00000 0 0123333332
Q ss_pred --CCC-----CCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCC
Q 010896 308 --WDK-----DRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSP 380 (498)
Q Consensus 308 --fd~-----~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~ 380 (498)
|+. ..|+..++||++++||++++.|+++|++|+++|+|++.+++ .|.+.+.++..+++++|+++|+++
T Consensus 238 ~v~~p~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~ 312 (396)
T 4dd5_A 238 PAFKKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGV-----DPKIMGYGPVPATKKALEAANMTI 312 (396)
T ss_dssp BSSSTTCSCBTTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCG
T ss_pred CccCCCCCeecCCCCCcCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecC-----CCCcccHHHHHHHHHHHHHcCCCH
Confidence 432 24567789999999999999999999999999999999874 455566678999999999999999
Q ss_pred CCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCC
Q 010896 381 EEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPE 459 (498)
Q Consensus 381 ~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~ 459 (498)
+||||||+|.+. .+|..++.+.|+- ..++++++.|.++||+++|+|+.++++++++|+++
T Consensus 313 ~dId~ve~~d~f-----~~~~~~~~~~lg~~~~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L~~~-------------- 373 (396)
T 4dd5_A 313 EDIDLVEANEAF-----AAQSVAVIRDLNIDMNKVNVNGGAIAIGHPIGCSGARILTTLLYEMKRR-------------- 373 (396)
T ss_dssp GGCSEEEECCSB-----HHHHHHHHHHHTCCTTSBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH--------------
T ss_pred HHcCEEEecChH-----HHHHHHHHHHhCCCCCccCCCCchhhccCcHHHHHHHHHHHHHHHHHhc--------------
Confidence 999999999542 3677788888874 45789999999999999999999999999999883
Q ss_pred CCcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 460 VTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 460 ~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
+.++++++.++.||...++||++
T Consensus 374 -------------~~~~gl~~~c~ggG~g~a~~~e~ 396 (396)
T 4dd5_A 374 -------------DAKTGLATLCIGGGMGTTLIVKR 396 (396)
T ss_dssp -------------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred -------------CCCeEEEEEcccCCceeEEEEeC
Confidence 34789999999999999999985
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=290.71 Aligned_cols=270 Identities=21% Similarity=0.300 Sum_probs=212.5
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+++++++||+|+|+ +++++| ++++|+.... ......+.+++..
T Consensus 29 ~~~L~~~A~~~Al~~agl---~~~~Id----~v~~g~~~~~--------------------------~~~~~~a~~i~~~ 75 (394)
T 3ss6_A 29 PVELAVPVLQEAVKRGGV---EPHEVD----EVILGHCIQR--------------------------TDEANTARTAALA 75 (394)
T ss_dssp HHHHHHHHHHHHHHHTTC---CGGGCC----EEEEECSSCC--------------------------GGGCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCC---CHhHCC----EEEEEEccCC--------------------------CccchHHHHHHHH
Confidence 357999999999999999 445666 6888864221 1123457789999
Q ss_pred hcC--CCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhH----------------------------
Q 010896 236 TGL--MGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGV---------------------------- 285 (498)
Q Consensus 236 lgl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~---------------------------- 285 (498)
+|+ ++|+++|+++|+|++.||+.|+++|++|++|.+||+|+|.+......
T Consensus 76 lGl~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (394)
T 3ss6_A 76 AGFPDTVTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVWEVLEDPIH 155 (394)
T ss_dssp TTCCTTCEEEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHHHHTBCTTT
T ss_pred cCCCCCceEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccccCCcccccccccccccccc
Confidence 999 57999999999999999999999999999999999999975431110
Q ss_pred ---HHHh----------------------hcc--------ccc----------cC---CCCCCCCCCc------------
Q 010896 286 ---GGFI----------------------ACR--------ALS----------QR---NEYPKRASRP------------ 307 (498)
Q Consensus 286 ---~~~~----------------------~~~--------~ls----------~~---~~~p~~~~rp------------ 307 (498)
.+.. ..+ .+. .+ -.+|++.+|+
T Consensus 156 ~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~d~~~R~~~t~e~~~~~~p 235 (394)
T 3ss6_A 156 HIMMGETAENLVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERRKEVVFSKDEHPRADITAEKLAGLKP 235 (394)
T ss_dssp CCBHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSSCEEEECSCCCCCTTCCHHHHHTCCB
T ss_pred cchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCCCceeecccccccCCCCHHHHhhCCC
Confidence 0000 000 000 00 0124555554
Q ss_pred -CCC-----CCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 010896 308 -WDK-----DRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPE 381 (498)
Q Consensus 308 -fd~-----~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~ 381 (498)
|+. ..++..++||++++||++++.|+++|++++++|+|++.++ ..|.+.+.++..+++++|+++|++++
T Consensus 236 vf~~~g~~t~~~~~~~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~-----~~p~~~~~~~~~a~~~al~~agl~~~ 310 (394)
T 3ss6_A 236 AFRKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAG-----VDPKIMGIGPAPAIRKGLEKVDWSLE 310 (394)
T ss_dssp SSSTTCCCBSTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEE-----CCGGGGGGTHHHHHHHHHHHHTCCGG
T ss_pred ccCCCCceecCccCCcccceeEEEeccHHHHHHCCCCceEEEEEEEEec-----CCCccchHHHHHHHHHHHHHcCCCHH
Confidence 653 2567778999999999999999999999999999999986 34555566778999999999999999
Q ss_pred CcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCC
Q 010896 382 EVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEV 460 (498)
Q Consensus 382 dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~ 460 (498)
||||||+|.+ ..+|..++.+.|+- ..++++++.|.++||+.+|+|+.++++++++|+++
T Consensus 311 dId~ve~~d~-----fa~~~~~~~~~lg~~~~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L~~~--------------- 370 (394)
T 3ss6_A 311 DADLLEINEA-----FAAQYLAVEKELDLDREKVNVNGSGVGLGHPIGCTGARITVSLIHELKRR--------------- 370 (394)
T ss_dssp GCSEEEECCS-----BHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH---------------
T ss_pred HcCEEEeCCc-----hHHHHHHHHHHhCCCCCCCCCCcchHhhCCcHHHHHHHHHHHHHHHHHhc---------------
Confidence 9999999943 23888889999875 35789999999999999999999999999999883
Q ss_pred CcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 461 TIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 461 ~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
+.++.+++.++-||...++||++
T Consensus 371 ------------~~~~gl~~~c~ggG~g~a~~~e~ 393 (394)
T 3ss6_A 371 ------------GLEKGIASLCVGGGIGVALFIEA 393 (394)
T ss_dssp ------------TCCEEEEEEEETTTEEEEEEEEE
T ss_pred ------------CCCEEEEEEccCcCceeEEEEEc
Confidence 34688888889999999999986
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-33 Score=287.17 Aligned_cols=270 Identities=18% Similarity=0.225 Sum_probs=211.7
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
..+|+++++++||+|||++ ++++| +|++|+..+.. ..+..+..++..
T Consensus 55 ~~~L~~~Aa~~AL~dAgl~---~~~id----~v~~g~~~~~~--------------------------~~~~~a~~~a~~ 101 (418)
T 2iik_A 55 PDELLSAVMTAVLKDVNLR---PEQLG----DICVGNVLQPG--------------------------AGAIMARIAQFL 101 (418)
T ss_dssp HHHHHHHHHHHHHHHHTCC---GGGCC----CEEEECSSSBG--------------------------GGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCC---HHHCC----EEEEEecCCcc--------------------------ccccHHHHHHHH
Confidence 4589999999999999994 44555 68898754321 123456677888
Q ss_pred hcC--CCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccc-hh---------h-----------HHHHh---
Q 010896 236 TGL--MGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAII-PT---------G-----------VGGFI--- 289 (498)
Q Consensus 236 lgl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~-p~---------~-----------~~~~~--- 289 (498)
+|+ ++|+++|+++|+|++.||+.|+++|++|++|++||+|+|.+.. |. . ..++.
T Consensus 102 lGl~~~~p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~ 181 (418)
T 2iik_A 102 SDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDCLIPMGITSEN 181 (418)
T ss_dssp TTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC-----CCCTTGGGCHHHHGGGSCHHHHHHH
T ss_pred cCCCCCceEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCcccchhhhcccccccccccHHHHHHH
Confidence 999 7899999999999999999999999999999999999997543 10 0 01110
Q ss_pred -------------------------h--ccccccC------------C------CCCCCCCCc-------------CCCC
Q 010896 290 -------------------------A--CRALSQR------------N------EYPKRASRP-------------WDKD 311 (498)
Q Consensus 290 -------------------------~--~~~ls~~------------~------~~p~~~~rp-------------fd~~ 311 (498)
+ .+.+... + .++++.||| ||.+
T Consensus 182 ~a~~~gitre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~~~~~d~~~rp~~t~e~l~~~~~vfd~~ 261 (418)
T 2iik_A 182 VAERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKD 261 (418)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEEEECTTSCEEEEEECSCTTCCTTCCHHHHHHCCCSSSTT
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHhChhcCccccceeeeeeccccccCcccceeeecccCcCCCCCHHHHhhCCCcccCC
Confidence 0 0111000 0 123568898 9987
Q ss_pred C-----CCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEE
Q 010896 312 R-----DGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYV 386 (498)
Q Consensus 312 ~-----~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i 386 (498)
+ ||+.++|||+++||++++.|+++|.+|+++|+|++.+.+ .|...+.+...+++++|++||++++|||||
T Consensus 262 ~~~t~~d~~~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~dId~v 336 (418)
T 2iik_A 262 GSTTAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGV-----PPDIMGIGPAYAIPVALQKAGLTVSDVDIF 336 (418)
T ss_dssp CCCCSTTBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEEC-----CGGGGGGHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred CceeeccccCCCCCceEEEEecHHHHHhcCCCceEEEEEEEeccC-----CchhcchhHHHHHHHHHHHcCCCHHHCCee
Confidence 6 999999999999999999999999999999999998762 344456677889999999999999999999
Q ss_pred EccCCCCccCcHHHHHHHHHHhcCCCcccccccc--cccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCc
Q 010896 387 NAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTK--SMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDT 464 (498)
Q Consensus 387 ~~hgtgt~~~D~~E~~al~~~f~~~~~~~v~s~K--~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~ 464 (498)
|+|++.+ .+|.+|.++|. |. +.+++..+ .++||++||+|+.++++++++|+++
T Consensus 337 E~h~af~-~~~~~~~~~lg--~~---~~~vN~~GG~~a~GHp~GAsG~~~~~~~~~~L~~~------------------- 391 (418)
T 2iik_A 337 EINEAFA-SQAAYCVEKLR--LP---PEKVNPLGGAVALGHPLGCTGARQVITLLNELKRR------------------- 391 (418)
T ss_dssp EECCSBH-HHHHHHHHHHT--CC---GGGBCTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH-------------------
T ss_pred eeeccch-HHHHHHHHHcC--CC---ccccCCCCCeeeecCChhhhHHHHHHHHHHHHHhc-------------------
Confidence 9998654 66999988874 22 23455444 6899999999999999999999872
Q ss_pred CCCcccccCcc-EEEEEccccccceeeEEEeeC
Q 010896 465 VPNVKKQHHVN-VAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 465 v~~~~~~~~~~-~alv~s~G~gG~n~~~vl~~~ 496 (498)
..+ +++++.++.||...++||+++
T Consensus 392 --------~~~~~gl~~~c~ggG~g~a~~~e~~ 416 (418)
T 2iik_A 392 --------GKRAYGVVSMCIGTGMGAAAVFEYP 416 (418)
T ss_dssp --------TSCEEEEEEEEETTTEEEEEEEEEC
T ss_pred --------CCCeeeEEEEeeccchhheEEEecc
Confidence 124 788888899999999999975
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-33 Score=284.49 Aligned_cols=270 Identities=22% Similarity=0.351 Sum_probs=209.6
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+++++++||+|+|++ ++++| ++++|+.... ......+.+++..
T Consensus 29 ~~~L~~~a~~~Al~~agi~---~~~Id----~v~~g~~~~~--------------------------~~~~~~a~~~~~~ 75 (395)
T 4e1l_A 29 AVQLGTIAVKEAISRVGLN---LSEID----EVIIGNVLQT--------------------------GLGQNVARQIAIN 75 (395)
T ss_dssp HHHHHHHHHHHHHHHTTCC---GGGCC----EEEEECCCCS--------------------------STTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCC---HHHCC----EEEEEeccCC--------------------------CCcchHHHHHHHH
Confidence 3579999999999999994 45666 6888864211 1122457789999
Q ss_pred hcC--CCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHH---------------------------
Q 010896 236 TGL--MGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVG--------------------------- 286 (498)
Q Consensus 236 lgl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~--------------------------- 286 (498)
+|+ ++|+++|+++|+|++.||+.|+++|++|++|.+||+|+|.+.......
T Consensus 76 lGl~~~~p~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (395)
T 4e1l_A 76 AGIPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAF 155 (395)
T ss_dssp TTCCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEET
T ss_pred cCCCCCceEEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccccCccccchhhccccccccc
Confidence 999 679999999999999999999999999999999999999754421100
Q ss_pred -----HHh----------------------hcc--------cccc----------C----CCCCCCCCCc----------
Q 010896 287 -----GFI----------------------ACR--------ALSQ----------R----NEYPKRASRP---------- 307 (498)
Q Consensus 287 -----~~~----------------------~~~--------~ls~----------~----~~~p~~~~rp---------- 307 (498)
+.. ..+ .+.. + -.+|++.+|+
T Consensus 156 ~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~g~~~~~~~d~~~r~~~t~e~l~~~ 235 (395)
T 4e1l_A 156 NQYHMGITAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLGMTFEGLSKL 235 (395)
T ss_dssp THHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEETTEEEEECSCSCCCTTCCHHHHHHC
T ss_pred ccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCCCcceEECCccccCCCCCHHHHhhC
Confidence 000 000 0000 0 0123344443
Q ss_pred ---CCC-----CCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCC
Q 010896 308 ---WDK-----DRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVS 379 (498)
Q Consensus 308 ---fd~-----~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~ 379 (498)
|+. ..++..++||++++||++++.|+++|++++++|+|++.+++ .|.+.+.++..+++++|+++|++
T Consensus 236 ~~v~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~ai~~al~~agl~ 310 (395)
T 4e1l_A 236 KPAFKKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGV-----EPEVMGTGPIPATRKALKKAGLS 310 (395)
T ss_dssp CBSSSTTCSCBTTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGTTCTHHHHHHHHHHHTTCC
T ss_pred CCccCCCCCeeCCcCCCccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccC-----CCCcchHHHHHHHHHHHHHcCCC
Confidence 442 24667789999999999999999999999999999999874 34444556789999999999999
Q ss_pred CCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCC
Q 010896 380 PEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEP 458 (498)
Q Consensus 380 ~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~ 458 (498)
++||||||+|.. ..+|..++.+.|+- ..++++++.|.++||+.||+|+.++++++++|+++
T Consensus 311 ~~dId~ve~~d~-----fa~~~~~~~~~lg~~~~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~~------------- 372 (395)
T 4e1l_A 311 INDIDLIEANEA-----FAAQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARILVTLIYEMQKR------------- 372 (395)
T ss_dssp GGGCSEEEECCS-----BHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHH-------------
T ss_pred HHHcCEEEecCh-----hHHHHHHHHHHhCCCCCCCCcCCchhhcCCcHHHHHHHHHHHHHHHHHhc-------------
Confidence 999999999833 22788888888874 35789999999999999999999999999999883
Q ss_pred CCCcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 459 EVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 459 ~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
+.++.+++.++-||...++||++
T Consensus 373 --------------~~~~gl~~~c~ggG~g~a~~~e~ 395 (395)
T 4e1l_A 373 --------------KVETGLATLCIGGGQGISMVVSR 395 (395)
T ss_dssp --------------TCSEEEEEEESSTTEEEEEEEEC
T ss_pred --------------CCCEEEEEEccCCCceEEEEEeC
Confidence 23788999999999999999984
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-33 Score=284.27 Aligned_cols=272 Identities=18% Similarity=0.192 Sum_probs=206.0
Q ss_pred HHHHHHHHHHHHHHHHC-CCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHH
Q 010896 155 DCWRYCLVAGRRALEEA-SLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLA 233 (498)
Q Consensus 155 ~~~~l~l~aa~~AL~dA-G~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia 233 (498)
+.++|+++++++||+|+ |+ +++++| ++++|+...... .....+.+++
T Consensus 26 ~~~~L~~~a~~~Al~~a~gi---~~~~Id----~v~~g~~~~~~~-------------------------~~~~~a~~~~ 73 (387)
T 3goa_A 26 RAEDLSAHLMRSLLARNPSL---TAATLD----DIYWGCVQQTLE-------------------------QGFNIARNAA 73 (387)
T ss_dssp CHHHHHHHHHHHHHHHCTTS---CGGGCC----EEEEECSCCSBT-------------------------TTTTHHHHHH
T ss_pred CHHHHHHHHHHHHHHhccCC---CHHHcC----EEEEEcccCCcc-------------------------cccHHHHHHH
Confidence 35689999999999999 99 445666 688887432110 0234567889
Q ss_pred HhhcC--CCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhH--------------------------
Q 010896 234 IDTGL--MGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGV-------------------------- 285 (498)
Q Consensus 234 ~~lgl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~-------------------------- 285 (498)
..+|+ ++|+++|+++|+|++.||+.|+++|++|++|.+||+|+|.+..+...
T Consensus 74 ~~~Gl~~~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~ 153 (387)
T 3goa_A 74 LLAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEM 153 (387)
T ss_dssp HHTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTTTBCCCTTCC-------CCCHHHHHH
T ss_pred HHcCCCCCCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCccccccCcCcccccccccccccHHHHHHH
Confidence 99999 57999999999999999999999999999999999999975432110
Q ss_pred ------------HHHhh---c--------cccccC--------------CCCCCCCCCc-------------CCC-----
Q 010896 286 ------------GGFIA---C--------RALSQR--------------NEYPKRASRP-------------WDK----- 310 (498)
Q Consensus 286 ------------~~~~~---~--------~~ls~~--------------~~~p~~~~rp-------------fd~----- 310 (498)
..|.. . +.+... ..++++.+|| |+.
T Consensus 154 ~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~p~f~~~~g~~ 233 (387)
T 3goa_A 154 LSRLHGISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTV 233 (387)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTTSCEEEECSCTTCCTTCCHHHHTTSCCSSCTTTCCC
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCcccceeeeeeccccCcccccccccccCCCCCHHHHhcCCCcccCCCCce
Confidence 00000 0 000000 0022344443 554
Q ss_pred -CCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEcc
Q 010896 311 -DRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAH 389 (498)
Q Consensus 311 -~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~h 389 (498)
..|+..++||++++||+++++|+++|++|+++|+|++.++++. .+.+.+...+++++|+++|++++||||||+|
T Consensus 234 t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~did~ve~h 308 (387)
T 3goa_A 234 TAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDP-----SIMGYGPVPASKLALKKAGLSASDIDVFEMN 308 (387)
T ss_dssp CGGGBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCT-----TSTTCTHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred ecccCCCcCccEEEEEEecHHHHHHcCCCccEEEEEEEEcCCCC-----CcchHHHHHHHHHHHHHcCCCHHHcCEEEEe
Confidence 2566778999999999999999999999999999999998743 3334456889999999999999999999999
Q ss_pred CCCCccCcHHHHHHHHHHhcC----CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcC
Q 010896 390 ATSTLAGDLAEVNAIKKVFKD----TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTV 465 (498)
Q Consensus 390 gtgt~~~D~~E~~al~~~f~~----~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v 465 (498)
.+.+.. +...+ +.++- ..++++++.|..+||++||+|+.++++++++|+++
T Consensus 309 ~~f~~~----~~~~~-~~lg~~~~~~~~vn~~gg~~~~GH~~gasG~~~~~~~~~~L~~~-------------------- 363 (387)
T 3goa_A 309 EAFAAQ----ILPCI-KDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERK-------------------- 363 (387)
T ss_dssp CSBHHH----HHHHH-HHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT--------------------
T ss_pred CcchHH----HHHHH-HHhCCCcCCCccCCCCCchhcccCCHHHHHHHHHHHHHHHHHhc--------------------
Confidence 887653 33333 33432 24678999999999999999999999999999872
Q ss_pred CCcccccCccEEEEEccccccceeeEEEee
Q 010896 466 PNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 466 ~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
+.++++++..+-||...++||++
T Consensus 364 -------~~~~gl~~~c~ggG~g~a~~~e~ 386 (387)
T 3goa_A 364 -------DAQFGLATMCIGLGQGIATVFER 386 (387)
T ss_dssp -------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred -------CCCEEEEEeccCcCceEEEEEEe
Confidence 23678888878889999999986
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-31 Score=273.99 Aligned_cols=271 Identities=16% Similarity=0.171 Sum_probs=196.8
Q ss_pred HHHHHHHHHHHHHHH-CCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHH
Q 010896 156 CWRYCLVAGRRALEE-ASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAI 234 (498)
Q Consensus 156 ~~~l~l~aa~~AL~d-AG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~ 234 (498)
..+|+++++++||+| +|++ ++++| +|++|+..... ......+.+++.
T Consensus 32 ~~~L~~~A~~~AL~~~AGl~---~~dId----~vi~g~~~~~~-------------------------~~~~~~a~~va~ 79 (407)
T 3svk_A 32 PLNLVVGLVDELRRRYPDLD---ETLIS----DMILGVVSPVG-------------------------DQGGDIARTAVL 79 (407)
T ss_dssp HHHHHHHHHHHHHHHSTTCC---GGGEE----EEEEECC---------------------------------CHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCcC---HHHCC----EEEEEecCccc-------------------------cccCcHHHHHHH
Confidence 457999999999999 9994 44555 68888632110 011335778999
Q ss_pred hhcC--CCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhh--------------------HHHHh---
Q 010896 235 DTGL--MGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTG--------------------VGGFI--- 289 (498)
Q Consensus 235 ~lgl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~--------------------~~~~~--- 289 (498)
.+|+ ++|+++|+++|+|++.||+.|+++|++|++|.+||+|+|.+..... ..++.
T Consensus 80 ~lGlp~~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~Ae~ 159 (407)
T 3svk_A 80 AAGLPETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGGAWATDPETNYRIGFVPQGIGADL 159 (407)
T ss_dssp HTTCCTTCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-----------CCCCTTTCCCCCCHHHHHHHHH
T ss_pred HcCCCCCCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCcccccccccccCchhhccccccCHHHHHHH
Confidence 9999 6799999999999999999999999999999999999997543100 00000
Q ss_pred -------------h--------------ccccc--------cC---CCCCCCCCCc-------------CCCC-------
Q 010896 290 -------------A--------------CRALS--------QR---NEYPKRASRP-------------WDKD------- 311 (498)
Q Consensus 290 -------------~--------------~~~ls--------~~---~~~p~~~~rp-------------fd~~------- 311 (498)
. .+.+. ++ ..+|++.+|+ |+..
T Consensus 160 ~a~~~~i~re~~d~~a~~s~~~A~~A~~~g~~~~ei~pv~~~~g~~~~~pd~~~r~~~t~e~l~~~~~vf~~~g~v~~~~ 239 (407)
T 3svk_A 160 IATLEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVRDQNGLVILDHDEHMRPDTTMEGLAKLKTAFDGVGEMGGFD 239 (407)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEECTTSCEEECSCTTCCTTCCHHHHHTSCBSCC---------
T ss_pred HHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeecCCCceeeCCccccCCCCCHHHHhhCCCeecCCCcccccc
Confidence 0 00000 00 0124454543 5432
Q ss_pred -------------------CCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHH
Q 010896 312 -------------------RDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKS 372 (498)
Q Consensus 312 -------------------~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~A 372 (498)
.|...++||++++||++++.|+++|.+++++|.|++.+.+.. ...+.+...+++++
T Consensus 240 ~~~~~~~~~~~~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p-----~~~~~~~~~a~~~a 314 (407)
T 3svk_A 240 DVALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATATSGSDP-----VIMLTGPTPATRKV 314 (407)
T ss_dssp ----CTTTTCSSCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC-----------CCCTHHHHHHHH
T ss_pred ccccccccccccccccccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEeccCC-----ccccHHHHHHHHHH
Confidence 455669999999999999999999999999999999987643 22233457899999
Q ss_pred HHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCC
Q 010896 373 LEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTL 451 (498)
Q Consensus 373 l~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~ 451 (498)
|+++|++++||||||+|.+.+.. |... .+.|+- ..++++++.|..+||+.||+|+.++++++++|++.
T Consensus 315 l~~Agl~~~dId~~e~hdaf~~~----~l~~-~~~lg~~~~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~L~~~------ 383 (407)
T 3svk_A 315 LDRAGLTIDDIDLFELNEAFASV----VLKF-QKDLNIPDEKLNVNGGAIAMGHPLGATGAMITGTMVDELERR------ 383 (407)
T ss_dssp HHHHTCCGGGCSEEEECCSBHHH----HHHH-HHHHTCCGGGBSTTCCHHHHCBCGGGHHHHHHHHHHHHHHHH------
T ss_pred HHHcCCCHHHCCEEEEeChhHHH----HHHH-HHHhCCCCCCCCCCCcHhheeCcHHHHHHHHHHHHHHHHHhc------
Confidence 99999999999999999776543 3333 344553 34789999999999999999999999999999872
Q ss_pred CCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 452 NQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 452 ~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
+.++++++.++.||...++||++
T Consensus 384 ---------------------~~~~gl~~~c~ggG~g~a~~~e~ 406 (407)
T 3svk_A 384 ---------------------NARRALITLCIGGGMGVATIIER 406 (407)
T ss_dssp ---------------------TCCEEEEEEECSSSCEEEEEEEE
T ss_pred ---------------------CCCEEEEEeeccCcceEEEEEEc
Confidence 34789999999999999999986
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-32 Score=270.91 Aligned_cols=294 Identities=17% Similarity=0.155 Sum_probs=208.4
Q ss_pred EEEEeeceecCCC-CCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCcccc-ccCCHHHHHHHHHHH
Q 010896 88 IVITGMGLVSVFG-SDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKND-RRLDDCWRYCLVAGR 165 (498)
Q Consensus 88 V~ItG~g~~~p~g-~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~-~~~d~~~~l~l~aa~ 165 (498)
+.|+|+|...|.. .+.+++++.+. .+ +.|-. .. .+ |..+.. ..-++..+|++++++
T Consensus 2 ~~I~~~g~~~P~~~~~~~~~~~~~~--~~-----~~~i~-----~~----~G------i~~r~~~~~~~~~~~la~~a~~ 59 (322)
T 1ub7_A 2 SGILALGAYVPERVMTNADFEAYLD--TS-----DEWIV-----TR----TG------IKERRVAAEDEYTSDLAFKAVE 59 (322)
T ss_dssp CEEEEEEEECCSEEEEHHHHHTTSS--CC-----HHHHH-----HH----TC------CCEEEECCTTCCHHHHHHHHHH
T ss_pred cEEEEEEEECCCceecHHHHHHHhC--CC-----HHHHH-----Hh----cC------ceEEeecCCCCCHHHHHHHHHH
Confidence 5799999999987 45666664321 00 00000 00 00 111111 113457799999999
Q ss_pred HHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCCCcccc
Q 010896 166 RALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSI 245 (498)
Q Consensus 166 ~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~Gp~~tv 245 (498)
+||+|+|+++ ++++ +|++|++... ...+..+.+++..||+++|++++
T Consensus 60 ~al~~ag~~~---~~id----~vi~~~~~~~--------------------------~~~~~~a~~v~~~lgl~~~~~~v 106 (322)
T 1ub7_A 60 DLLRRHPGAL---EGVD----AVIVATNTPD--------------------------ALFPDTAALVQARFGLKAFAYDL 106 (322)
T ss_dssp HHHHHSTTTT---TTEE----EEEEECSSCS--------------------------EEESCHHHHHHHHTTCCCEEEEE
T ss_pred HHHHHcCCCH---HHCC----EEEEEcCCCC--------------------------CCCCcHHHHHHHHhCCCCEEEee
Confidence 9999999943 3333 6888875311 11123678999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeEEEE
Q 010896 246 STACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILV 325 (498)
Q Consensus 246 ~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaaavv 325 (498)
+++|+|++.||..|+++|++|++|.+||+|+|. +++. ..|+| .++|+++||||+++|
T Consensus 107 ~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~-~s~~---------------------~~~~d-~~~~~~~GdGA~A~v 163 (322)
T 1ub7_A 107 LAGCPGWIYALAQAHALVEAGLAQKVLAVGAEA-LSKI---------------------IDWND-RATAVLFGDGGGAAV 163 (322)
T ss_dssp ECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEEC-GGGT---------------------SCTTC-HHHHTTBCCEEEEEE
T ss_pred CccchHHHHHHHHHHHHHHcCCCCEEEEEEech-hccc---------------------cChhh-cccceeeccccEEEE
Confidence 999999999999999999999999999999997 3331 12444 467999999999999
Q ss_pred EcchHHHHhcCCcEEEEE-EeEEEecCCCCCC-----CCCC---------Ch--------HHHHHHHHHHHHHcCCCCCC
Q 010896 326 MESLEHAMKRGANIIAEY-LGGAVTCDAHHMT-----DPRS---------DG--------LGVSSCIAKSLEDAGVSPEE 382 (498)
Q Consensus 326 Le~~~~A~~~g~~i~a~I-~g~~~~~dg~~~~-----~p~~---------~~--------~~~~~~i~~Al~~Agl~~~d 382 (498)
|++.+. +.++++.+ .+.+...|..+.. .|.. ++ ..+.++++++|+++|++++|
T Consensus 164 L~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~d 239 (322)
T 1ub7_A 164 VGKVRE----GYGFRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAIEKAGLTPED 239 (322)
T ss_dssp EECCCT----TCEEEEEEEEECGGGCTTEEEESSCSBCTTSCBCCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred EEecCC----CCceeEEEEEEecCCCCeEEeCCCCCCCCccccccceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 998653 34566654 2222222221111 1222 34 57788999999999999999
Q ss_pred cCEEEccCCCCccCcHHHHHHHHHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCc
Q 010896 383 VNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTI 462 (498)
Q Consensus 383 Id~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~ 462 (498)
||||++|+++++.+|. +.+.|+-. .-.+.+.|..+||+.+|++.+.|.++ ++++.+.
T Consensus 240 id~~~~H~~~~~~~d~-----~~~~lg~~-~~~~~~~~~~~Gh~~~As~~~~l~~~---l~~g~~~-------------- 296 (322)
T 1ub7_A 240 IRLFVPHQANLRIIDA-----ARERLGLP-WERVAVNVDRYGNTSTASIPLALKEA---VDAGRIR-------------- 296 (322)
T ss_dssp CSEEEECCSCHHHHHH-----HHHTTTCC-GGGBCCCHHHHCBCGGGHHHHHHHHH---HHHTSSC--------------
T ss_pred CCEEEEcCCCHHHHHH-----HHHHcCCC-HHHHHHHHHhhCcHHHHHHHHHHHHH---HHhCCCC--------------
Confidence 9999999999998774 56677641 12345789999999999999988764 4555541
Q ss_pred CcCCCcccccCccEEEEEccccccceeeEEEeeC
Q 010896 463 DTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 463 ~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
+.+++++++||+|++|+++||+.+
T Consensus 297 ----------~g~~~l~~~~G~G~~~~~~vl~~~ 320 (322)
T 1ub7_A 297 ----------EGDHVLLVSFGAGLTWAAAVLTWG 320 (322)
T ss_dssp ----------TTCEEEEEEEETTTEEEEEEEECC
T ss_pred ----------CCCEEEEEEEChhheeEEEEEEeC
Confidence 236899999999999999999753
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.5e-30 Score=254.78 Aligned_cols=289 Identities=20% Similarity=0.245 Sum_probs=206.3
Q ss_pred cEEEEeeceecCCC-CCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHHH
Q 010896 87 RIVITGMGLVSVFG-SDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGR 165 (498)
Q Consensus 87 ~V~ItG~g~~~p~g-~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa~ 165 (498)
++.|+|+|...|.. .+.+++++.+. . . +.|-. ... + |..+.....++..+|++++++
T Consensus 2 ~~~I~~~g~~~P~~~~~~~~~~~~~~--~---~--~~~i~-----~~~----G------i~~r~~~~~~~~~~l~~~a~~ 59 (309)
T 2ebd_A 2 GTKIIGTGVYLPKNVLTNFDLEKIVD--T---S--DEWIT-----TRT----G------IKERRIAKEETITYMATQAAK 59 (309)
T ss_dssp CEEEEEEEEECCSEEEEHHHHHTTSS--C---C--HHHHH-----HHH----C------CCEEEECSSCCHHHHHHHHHH
T ss_pred ceEEEEEEEECCCceEcHHHHHHHcC--C---C--HHHHH-----HHh----C------ceeeeecCCCCHHHHHHHHHH
Confidence 48999999999987 45666664321 0 0 00000 000 0 111111111567899999999
Q ss_pred HHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCC-Cccc
Q 010896 166 RALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMG-PNYS 244 (498)
Q Consensus 166 ~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~G-p~~t 244 (498)
+||+|+|++ +++++ +|++|+..+.. . . +..+.+++..||+++ |+++
T Consensus 60 ~al~~ag~~---~~~id----~v~~~~~~~~~---------------------~----~-~~~a~~v~~~lgl~~~~~~~ 106 (309)
T 2ebd_A 60 EALREANLS---PEELD----LIILATLTPQK---------------------R----F-PSTACLVQAQLKAKGVYAFD 106 (309)
T ss_dssp HHHHHHTCC---GGGCS----EEEEECSSCSS---------------------S----S-SCHHHHHHHHHTCTTCEEEE
T ss_pred HHHHHcCCC---HHHCC----EEEEEcCCCCC---------------------C----C-CcHHHHHHHHhCCCCceEEe
Confidence 999999994 44555 79998753210 1 1 226789999999999 9999
Q ss_pred cccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeEEE
Q 010896 245 ISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324 (498)
Q Consensus 245 v~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaaav 324 (498)
++++|+|++.||+.|+++|++|++|.+||+|+|.+ ++. .. |+...+|+++||||+++
T Consensus 107 v~~~C~s~~~al~~A~~~i~~g~~~~vlv~g~e~~-s~~---------------------~~-~~~~~~~~~~gdGaaA~ 163 (309)
T 2ebd_A 107 ISAACSGFIYALDIADSFIKSGKAKNVLVIGAEKL-SEA---------------------VD-WEDRSTCVLFGDGAGAV 163 (309)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEG-GGT---------------------CC-TTCTTTTTTBCEEEEEE
T ss_pred cCccchHHHHHHHHHHHHHHCCCCCEEEEEEeccc-ccc---------------------cC-ccchhhccccccccEEE
Confidence 99999999999999999999999999999999973 210 01 23346899999999999
Q ss_pred EEcchHHHHhcCCcEEEEEEeEEEecCCC---CCCCC-----CCChH--------HHHHHHHHHHHHcCCCCCCcCEEEc
Q 010896 325 VMESLEHAMKRGANIIAEYLGGAVTCDAH---HMTDP-----RSDGL--------GVSSCIAKSLEDAGVSPEEVNYVNA 388 (498)
Q Consensus 325 vLe~~~~A~~~g~~i~a~I~g~~~~~dg~---~~~~p-----~~~~~--------~~~~~i~~Al~~Agl~~~dId~i~~ 388 (498)
||++.+.+ ..+++.+ ..+|+. ++..| ..++. .+.++++++|+++|++++|||||++
T Consensus 164 vL~~~~~~----~~i~~~~----~~~~g~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~ 235 (309)
T 2ebd_A 164 VVTRSEDK----SDILATR----MYAEGSLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIP 235 (309)
T ss_dssp EEEECSSS----CEEEEEE----EEECGGGGGGEEECTTCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEE
T ss_pred EEEecCCC----CceeEEE----EEecCCccceeEeCCCCeEEEccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 99987643 2355443 344442 23333 33454 6788999999999999999999999
Q ss_pred cCCCCccCcHHHHHHHHHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCc
Q 010896 389 HATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNV 468 (498)
Q Consensus 389 hgtgt~~~D~~E~~al~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~ 468 (498)
|+++++..| ++.+.|+-. .-.+.+.|..+||+.+|++++.|.+++. ++.+.
T Consensus 236 H~~~~~~~~-----~~~~~lg~~-~~~~~~~~~~~Gh~~~As~~~~L~~~~~---~g~~~-------------------- 286 (309)
T 2ebd_A 236 HQANVRIIN-----ALAEKLNIP-KEKVFVNIQKYGNTSAASIPIALHEAIK---EGKVK-------------------- 286 (309)
T ss_dssp CCSCHHHHH-----HHHHHTTCC-GGGBCCCHHHHCBCGGGHHHHHHHHHHH---TTCCC--------------------
T ss_pred cCCCHHHHH-----HHHHHhCCC-HHHhhhhHhhhcchHHHHHHHHHHHHHH---cCCCC--------------------
Confidence 999998866 356677641 1223467899999999999999988753 33221
Q ss_pred ccccCccEEEEEccccccceeeEEEe
Q 010896 469 KKQHHVNVAISNSFGFGGHNSVVVFA 494 (498)
Q Consensus 469 ~~~~~~~~alv~s~G~gG~n~~~vl~ 494 (498)
+.+++++.+||.|.+..+++|+
T Consensus 287 ----~G~~~l~~~~G~G~~~~~~~l~ 308 (309)
T 2ebd_A 287 ----RGDLILMTAMGGGLTWGAVLLR 308 (309)
T ss_dssp ----TTCEEEEEEEETTTEEEEEEEE
T ss_pred ----CCCEEEEEEEchhhhhEEEEEE
Confidence 2357888999999999999986
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.8e-30 Score=255.10 Aligned_cols=292 Identities=14% Similarity=0.156 Sum_probs=207.7
Q ss_pred cEEEEeeceecCCC-CCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCcccc-ccCCHHHHHHHHHH
Q 010896 87 RIVITGMGLVSVFG-SDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKND-RRLDDCWRYCLVAG 164 (498)
Q Consensus 87 ~V~ItG~g~~~p~g-~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~-~~~d~~~~l~l~aa 164 (498)
++.|+|+|...|.. .+.+++++.+. .+ +.|-. .. .-|..+.. ...++..+|+++++
T Consensus 2 ~~~I~~~g~~~P~~~~~~~~~~~~~~--~~-----~~~i~-----~~----------~Gi~~r~~~~~~~~~~~l~~~a~ 59 (317)
T 1hnj_A 2 YTKIIGTGSYLPEQVRTNADLEKMVD--TS-----DEWIV-----TR----------TGIRERHIAAPNETVSTMGFEAA 59 (317)
T ss_dssp EEEEEEEEEECCSEEEEHHHHHTTSS--CC-----HHHHH-----HH----------HCCCEEEECCTTCCHHHHHHHHH
T ss_pred CcEEEEEEEeCCCceecHHHHHHHhC--CC-----HHHHH-----HH----------hCceEEEecCCCCCHHHHHHHHH
Confidence 58999999999987 45666664321 00 00000 00 00222221 13456789999999
Q ss_pred HHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCC-CCcc
Q 010896 165 RRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLM-GPNY 243 (498)
Q Consensus 165 ~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~-Gp~~ 243 (498)
++||+|+|++ +++++ +|++|++... ...+..+.+++..||++ +|++
T Consensus 60 ~~al~~ag~~---~~~id----~vi~g~~~~~--------------------------~~~~~~a~~v~~~lgl~~~~~~ 106 (317)
T 1hnj_A 60 TRAIEMAGIE---KDQIG----LIVVATTSAT--------------------------HAFPSAACQIQSMLGIKGCPAF 106 (317)
T ss_dssp HHHHHHHTCC---GGGCC----EEEEECSCCS--------------------------CSSSCHHHHHHHHHTCCSSCEE
T ss_pred HHHHHHcCCC---HHHCC----EEEEEcCCCC--------------------------CCCCcHHHHHHHHhCCCCCeEE
Confidence 9999999994 44555 6888875321 11234688999999998 8999
Q ss_pred ccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeEE
Q 010896 244 SISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGI 323 (498)
Q Consensus 244 tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaaa 323 (498)
+|+++|+|++.||+.|+++|++|++|.+||+|+|.+ ++. + . |+...+|+++||||++
T Consensus 107 ~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~-s~~----------~-----------~-~~d~~~~~~~GdGA~A 163 (317)
T 1hnj_A 107 DVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVL-ART----------C-----------D-PTDRGTIIIFGDGAGA 163 (317)
T ss_dssp EECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECH-HHH----------S-----------C-TTCHHHHTTBCCEEEE
T ss_pred eeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechh-ccc----------C-----------C-chhcccceeeccccEE
Confidence 999999999999999999999999999999999962 221 0 1 2222458999999999
Q ss_pred EEEcchHHHHhcCCcEEEEEEeE-EEecCCCCCCCC-----------CCChH--------HHHHHHHHHHHHcCCCCCCc
Q 010896 324 LVMESLEHAMKRGANIIAEYLGG-AVTCDAHHMTDP-----------RSDGL--------GVSSCIAKSLEDAGVSPEEV 383 (498)
Q Consensus 324 vvLe~~~~A~~~g~~i~a~I~g~-~~~~dg~~~~~p-----------~~~~~--------~~~~~i~~Al~~Agl~~~dI 383 (498)
+||++.+. ..+++.+.+. +...|..+...+ .++++ .+.++|+++|+++|++++||
T Consensus 164 ~vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~aL~~agl~~~di 238 (317)
T 1hnj_A 164 AVLAASEE-----PGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQL 238 (317)
T ss_dssp EEEEEESS-----CSEEEEEEEECGGGGGGEECCCCCSSCTTSCCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGC
T ss_pred EEEEecCC-----CceeeEEEEEcCCCCCeEEECCCCCCCCCCCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 99998653 3577776542 222222222211 13455 67889999999999999999
Q ss_pred CEEEccCCCCccCcHHHHHHHHHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcC
Q 010896 384 NYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTID 463 (498)
Q Consensus 384 d~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~ 463 (498)
|||++|+++++.+|. +.+.|+-. .-.+.+.|..+||+.+|++.+.|..++ +.+.+.
T Consensus 239 d~v~~H~~~~~~~d~-----i~~~lg~~-~~~~~~~~~~~Gn~~~As~~~~L~~~~---~~~~~~--------------- 294 (317)
T 1hnj_A 239 DWLVPHQANLRIISA-----TAKKLGMS-MDNVVVTLDRHGNTSAASVPCALDEAV---RDGRIK--------------- 294 (317)
T ss_dssp CEEEECCSCHHHHHH-----HHHHTTCC-GGGBCCCHHHHCBCGGGHHHHHHHHHH---HTTCSC---------------
T ss_pred CEEEEcCCCHHHHHH-----HHHHcCCC-HHHhHhhHhhhCcHHHHHHHHHHHHHH---HhCCCC---------------
Confidence 999999999998774 66777642 224568899999999999998887654 343321
Q ss_pred cCCCcccccCccEEEEEccccccceeeEEEe
Q 010896 464 TVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494 (498)
Q Consensus 464 ~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~ 494 (498)
+.+.+++.+||.|.+..+++|+
T Consensus 295 ---------~G~~vll~~~G~G~t~~~~~l~ 316 (317)
T 1hnj_A 295 ---------PGQLVLLEAFGGGFTWGSALVR 316 (317)
T ss_dssp ---------TTCEEEEEEEETTTEEEEEEEE
T ss_pred ---------CCCEEEEEEEchhheeEEEEEE
Confidence 1256788899999998888885
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-29 Score=254.89 Aligned_cols=294 Identities=17% Similarity=0.148 Sum_probs=205.2
Q ss_pred CCcEEEEeeceecCCC-CCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCcccc-ccCCHHHHHHHH
Q 010896 85 KKRIVITGMGLVSVFG-SDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKND-RRLDDCWRYCLV 162 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g-~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~-~~~d~~~~l~l~ 162 (498)
++++.|+|+|+.+|.. .+.+++|+.+.. .+.|-. .. .+ |..+.. ...++..+|+++
T Consensus 9 ~~~~~I~gig~~~P~~~~~~~~~~~~~~~-------~~~~i~-----~~----~G------i~~R~~~~~~~~~~~la~~ 66 (339)
T 1mzj_A 9 RRFSRVLGVGSYRPRREVSNKEVCTWIDS-------TEEWIE-----TR----TG------IRSRRIAEPDETIQVMGVA 66 (339)
T ss_dssp CCEEEEEEEEEECCSCEEEHHHHTTTSSC-------CHHHHH-----HH----HC------CSEEECCCTTCCHHHHHHH
T ss_pred cCceEEEEEEEeCCCccccHHHHHHHhCC-------CHHHHH-----Hh----cC------ceEEEEeCCCCCHHHHHHH
Confidence 4579999999999987 556777754310 001100 00 00 122211 123567899999
Q ss_pred HHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCC-CC
Q 010896 163 AGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLM-GP 241 (498)
Q Consensus 163 aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~-Gp 241 (498)
++++||+|+|++ +++++ +|++|++.+.. .. ...+.+++..||++ +|
T Consensus 67 Aa~~al~~ag~~---~~~id----~vi~gt~~~~~---------------------~~-----p~~a~~v~~~lgl~~~~ 113 (339)
T 1mzj_A 67 ASRRALEHAGVD---PAEID----LVVVSTMTNFV---------------------HT-----PPLSVAIAHELGADNAG 113 (339)
T ss_dssp HHHHHHHHHTCC---GGGCC----EEEEECSCCCC---------------------CS-----SCHHHHHHHHHTCTTCE
T ss_pred HHHHHHHHcCCC---HHHCC----EEEEEecCCCC---------------------CC-----ChHHHHHHHHhCCCCcc
Confidence 999999999994 44555 78888754321 11 12678999999998 79
Q ss_pred ccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCcccccee
Q 010896 242 NYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGC 321 (498)
Q Consensus 242 ~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGa 321 (498)
+++|+++|+|++.||+.|+++|++|++|.+||+|+|. +++. + .+ +..++|+++||||
T Consensus 114 ~~~v~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~-~s~~----------~-----------~~-~d~~~~~~~GdGA 170 (339)
T 1mzj_A 114 GFDLSAACAGFCHALSIAADAVESGGSRHVLVVATER-MTDV----------I-----------DL-ADRSLSFLFGDGA 170 (339)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEE-GGGG----------S-----------CS-SCTTTTTTBCEEE
T ss_pred EEEccccchHHHHHHHHHHHHHHCCCCCEEEEEEEcc-cccc----------c-----------Cc-cccccceEeccCc
Confidence 9999999999999999999999999999999999997 3332 1 11 1246799999999
Q ss_pred EEEEEcchHHHHhcCCcEEEEE-EeEEEecCCCCCC--CCCC-------------Ch--------HHHHHHHHHHHHHcC
Q 010896 322 GILVMESLEHAMKRGANIIAEY-LGGAVTCDAHHMT--DPRS-------------DG--------LGVSSCIAKSLEDAG 377 (498)
Q Consensus 322 aavvLe~~~~A~~~g~~i~a~I-~g~~~~~dg~~~~--~p~~-------------~~--------~~~~~~i~~Al~~Ag 377 (498)
+++||++.+. .++++.. .+.+...|..+.. .|.+ ++ ..+.++++++|+++|
T Consensus 171 ~A~vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~g~~p~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~ag 245 (339)
T 1mzj_A 171 GAAVVGPSDV-----PGIGPVVRGIDGTGLGSLHMSSSWDQYVEDPSVGRPALVMDGKRVFRWAVADVVPAAREALEVAG 245 (339)
T ss_dssp EEEEEEEESS-----CCBCCCEEEECGGGGGGEEESCCHHHHTTCSSSCSCCEEECHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred eEEEEEecCC-----CCeEEEEEEEcCCCCCeEEecCCCCCcccccccccceEEeeCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999997642 3454432 2222111211111 0111 23 567889999999999
Q ss_pred CCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CC-cccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCC
Q 010896 378 VSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TS-EMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDN 455 (498)
Q Consensus 378 l~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~-~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~ 455 (498)
++++|||||++|+++++.+|. +.+.|+- .. ++. .....+||+.+|++.+.|.+++ +.+.+.
T Consensus 246 l~~~did~v~~H~~~~~~~d~-----i~~~lg~~~~~~~~--~~~~~~Gn~~sAs~~~~L~~~~---~~g~~~------- 308 (339)
T 1mzj_A 246 LTVGDLVAFVPHQANLRIIDV-----LVDRLGVPEHVVVS--RDAEDTGNTSSASVALALDRLV---RSGAVP------- 308 (339)
T ss_dssp CCGGGCSEEEECCSCHHHHHH-----HHHHHTCCTTSEEC--CTHHHHCBCTTHHHHHHHHHHH---HHTSSC-------
T ss_pred CCHHHCCEEEECCCCHHHHHH-----HHHHhCCCccceee--ehhhhcCchHHHHHHHHHHHHH---HcCCCC-------
Confidence 999999999999999999885 4556664 22 333 3356899999999999877654 444321
Q ss_pred CCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 456 LEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 456 ~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
+.+++++.+||+|.+.++++|+-
T Consensus 309 -----------------~G~~vll~~~G~G~t~~~~~l~~ 331 (339)
T 1mzj_A 309 -----------------GGGPALMIGFGAGLSYAGQALLL 331 (339)
T ss_dssp -----------------TTCEEEEEEEETTTEEEEEEEEC
T ss_pred -----------------CCCEEEEEEEchhheeEEEEEEe
Confidence 23578889999999999999975
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5.9e-29 Score=247.85 Aligned_cols=247 Identities=15% Similarity=0.227 Sum_probs=182.4
Q ss_pred CHHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHH
Q 010896 154 DDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLA 233 (498)
Q Consensus 154 d~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia 233 (498)
.+..+|+++++++||+|+|++ +++++ +|++|++.+.. .. ...+.+++
T Consensus 49 ~~~~~l~~~a~~~al~~ag~~---~~~id----~vi~~~~~~~~---------------------~~-----~~~a~~v~ 95 (313)
T 1zow_A 49 QDTSDLAYEASVKAIADAGIQ---PEDID----MIIVATATGDM---------------------PF-----PTVANMLQ 95 (313)
T ss_dssp CCHHHHHHHHHHHHHHHHTCC---GGGCC----EEEEECSSCSC---------------------SS-----SCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCC---HHHCC----EEEEEcCCCCC---------------------CC-----CcHHHHHH
Confidence 356799999999999999994 44555 78888753311 11 13578999
Q ss_pred HhhcCC-CCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCC
Q 010896 234 IDTGLM-GPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDR 312 (498)
Q Consensus 234 ~~lgl~-Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~ 312 (498)
..+|++ +|+++++++|+|++.||..|+++|++|++|.+||+|+|.+. +. .+|+|. .
T Consensus 96 ~~lgl~~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vLv~g~e~~s-~~---------------------~~~~d~-~ 152 (313)
T 1zow_A 96 ERLGTGKVASMDQLAACSGFMYSMITAKQYVQSGDYHNILVVGADKLS-KI---------------------TDLTDR-S 152 (313)
T ss_dssp HHHTCCSCCEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEEGG-GT---------------------CCTTCH-H
T ss_pred HHhCCCCCcEEEECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccc-cc---------------------cCcccc-c
Confidence 999998 59999999999999999999999999999999999999631 11 134543 3
Q ss_pred CCccccceeEEEEEcchHHHHhcCCcEEEE-EEeEEEecCCCCCCCC----CCCh--------HHHHHHHHHHHHHcCCC
Q 010896 313 DGFVMGEGCGILVMESLEHAMKRGANIIAE-YLGGAVTCDAHHMTDP----RSDG--------LGVSSCIAKSLEDAGVS 379 (498)
Q Consensus 313 ~G~v~gEGaaavvLe~~~~A~~~g~~i~a~-I~g~~~~~dg~~~~~p----~~~~--------~~~~~~i~~Al~~Agl~ 379 (498)
+|+++|||++++||++.+. +.++++. +.+.+...+..+...| ..++ ..+.++++++|+++|++
T Consensus 153 ~~~~~gdGa~A~vl~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~ 228 (313)
T 1zow_A 153 TAVLFGDGAGAVIIGEVSE----GRGIISYEMGSDGTGGKHLYLDKDTGKLKMNGREVFKFAVRIMGDASTRVVEKANLT 228 (313)
T ss_dssp HHTTBCEEEEEEEEEECST----TCEEEEEEEEECGGGGGGEEECTTTCCEEECHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ceeeeccceEEEEEEecCC----CCceeEEEEEEcCCCcCeEEecCCCCeeEeccHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 6899999999999998653 3455543 2222222222111111 1133 36788999999999999
Q ss_pred CCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCC
Q 010896 380 PEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEP 458 (498)
Q Consensus 380 ~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~ 458 (498)
++|||||++|+++++.+|.+ .+.|+- ..+++ ..|..+||+.+|++.+.|..++ +.+.+
T Consensus 229 ~~did~~~~H~~~~~~~d~~-----~~~lg~~~~~~~--~~~~~~Gh~~~as~~~~L~~~~---~~~~~----------- 287 (313)
T 1zow_A 229 SDDIDLFIPHQANIRIMESA-----RERLGISKDKMS--VSVNKYGNTSAASIPLSIDQEL---KNGKL----------- 287 (313)
T ss_dssp GGGCSEEEECCSCHHHHHHH-----HHHHTCCGGGBC--CCHHHHCBCGGGHHHHHHHHHH---HTTCC-----------
T ss_pred HHHCCEEEEcCCCHHHHHHH-----HHHhCCCHHHHH--HhHhhhCchHHHHHHHHHHHHH---HcCCC-----------
Confidence 99999999999999998864 455653 12233 4699999999999999987764 33322
Q ss_pred CCCcCcCCCcccccCccEEEEEccccccceeeEEEe
Q 010896 459 EVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494 (498)
Q Consensus 459 ~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~ 494 (498)
.+.+++++.+||.|.+.++++|+
T Consensus 288 -------------~~g~~vl~~~~G~G~t~~~~~l~ 310 (313)
T 1zow_A 288 -------------KDDDTIVLVGFGGGLTWGAMTIK 310 (313)
T ss_dssp -------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred -------------CCCCEEEEEEEchhhhheEEEEE
Confidence 12367889999999999999986
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3.5e-27 Score=237.28 Aligned_cols=296 Identities=22% Similarity=0.286 Sum_probs=200.6
Q ss_pred CCcEEEEeeceecCCC-CCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccc-cCCHHHHHHHH
Q 010896 85 KKRIVITGMGLVSVFG-SDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDR-RLDDCWRYCLV 162 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g-~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~-~~d~~~~l~l~ 162 (498)
+.++.|+|+|+..|.. .+.+++|+.+.. .+.|-.. + .-|..+... ..++..+|+++
T Consensus 10 m~~~~I~g~g~~~P~~~~~~~~~~~~~~~-------~~~~i~~----~-----------~gi~~r~~~~~~~~~~~la~~ 67 (335)
T 1u6e_A 10 ARSVGLLSVGAYRPERVVTNDEICQHIDS-------SDEWIYT----R-----------TGIKTRRFAADDESAASMATE 67 (335)
T ss_dssp CSCEEEEEEEEECCSEEEEHHHHTTSSSC-------CHHHHHH----H-----------HCCSEEEECCTTCCHHHHHHH
T ss_pred CCceEEEEEEEECCCceecHHHHHHHhCC-------CHHHHHH----h-----------cCCceEeecCCCCCHHHHHHH
Confidence 4569999999999987 556777653310 0111000 0 002222221 23567899999
Q ss_pred HHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCC-CC
Q 010896 163 AGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLM-GP 241 (498)
Q Consensus 163 aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~-Gp 241 (498)
++++||+|+|++ +++++ +|++|+..+.. . ....+.+++..||++ +|
T Consensus 68 A~~~al~~ag~~---~~~id----~vi~~t~~~~~---------------------~-----~~~~a~~v~~~lgl~~~~ 114 (335)
T 1u6e_A 68 ACRRALSNAGLS---AADID----GVIVTTNTHFL---------------------Q-----TPPAAPMVAASLGAKGIL 114 (335)
T ss_dssp HHHHHHHHHTCC---GGGCC----EEEEECSCCCC---------------------S-----SSCHHHHHHHHHTCTTSE
T ss_pred HHHHHHHHcCCC---HHHCC----EEEEEcCCCCC---------------------C-----CChHHHHHHHHhCCCCCc
Confidence 999999999994 44555 78888753311 1 124678999999998 59
Q ss_pred ccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCcccccee
Q 010896 242 NYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGC 321 (498)
Q Consensus 242 ~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGa 321 (498)
+++|+++|+|++.||+.|+++|++|++|.+||+|+|.+. + ..+|+|. .+++++||||
T Consensus 115 ~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLv~g~e~~s-~---------------------~~~~~d~-~~~~~~gDGA 171 (335)
T 1u6e_A 115 GFDLSAGAAGFGYALGAAADMIRGGGAATMLVVGTEKLS-P---------------------TIDMYDR-GNCFIFADGA 171 (335)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHTSCSSEEEEEEEECG-G---------------------GCCTTCT-TTTTTBCEEE
T ss_pred EeeeccccHHHHHHHHHHHHHHHcCCCCEEEEEEEcccc-c---------------------ccCcccc-ccceEecccc
Confidence 999999999999999999999999999999999999732 1 1244543 5899999999
Q ss_pred EEEEEcchHHHHhcCCcEEEEEEeE-EEecCCCCCC--------CC-------CCCh--------HHHHHHHHHHHHHcC
Q 010896 322 GILVMESLEHAMKRGANIIAEYLGG-AVTCDAHHMT--------DP-------RSDG--------LGVSSCIAKSLEDAG 377 (498)
Q Consensus 322 aavvLe~~~~A~~~g~~i~a~I~g~-~~~~dg~~~~--------~p-------~~~~--------~~~~~~i~~Al~~Ag 377 (498)
+++||++.+. ++ ++.++.+. +...+..+.. .| ..++ ..+.++++++|+++|
T Consensus 172 ~A~vl~~~~~---~~--i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~ag 246 (335)
T 1u6e_A 172 AAVVVGETPF---QG--IGPTVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDAAG 246 (335)
T ss_dssp EEEEEEECSS---CC--BCCCEEEECGGGGGGEEESSCHHHHHTSTTSCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEecCC---CC--eeEEEEEEcCCcccceeecCCccCcCCCccCccceEEEcCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999997653 22 44444332 1111110000 00 1123 356789999999999
Q ss_pred CCCCCcCEEEccCCCCccCcHHHHHHHHHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCC
Q 010896 378 VSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLE 457 (498)
Q Consensus 378 l~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~ 457 (498)
++++|||||++|+++++..|. +.+.|+-...-.+...+..+||+.+|+..+.|..+ ++.+.+
T Consensus 247 l~~~dId~~~~H~~~~~~~~~-----~~~~lg~~~~~~~~~~~~~~Gnt~sAs~~~~L~~~---~~~~~~---------- 308 (335)
T 1u6e_A 247 VRPDQIDVFVPHQANSRINEL-----LVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAEL---LTTGAA---------- 308 (335)
T ss_dssp CCGGGCCEEEECCSCHHHHHH-----HHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHH---HHHTSS----------
T ss_pred CCHHHCCEEEECCCCHHHHHH-----HHHHcCCCchhhhhhhhhhhCcHHHHHHHHHHHHH---HHcCCC----------
Confidence 999999999999999998886 44556531110222346889999999965433322 222211
Q ss_pred CCCCcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 458 PEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 458 ~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
.+.+++++++||+|++++++||+-
T Consensus 309 --------------~~g~~~l~~~~G~G~t~~~~vl~~ 332 (335)
T 1u6e_A 309 --------------KPGDLALLIGYGAGLSYAAQVVRM 332 (335)
T ss_dssp --------------CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred --------------CCCCEEEEEEEehhheeEEEEEEe
Confidence 123688999999999999999975
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-26 Score=232.94 Aligned_cols=289 Identities=19% Similarity=0.222 Sum_probs=203.2
Q ss_pred cEEEEeeceecCCC-CCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHHH
Q 010896 87 RIVITGMGLVSVFG-SDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGR 165 (498)
Q Consensus 87 ~V~ItG~g~~~p~g-~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa~ 165 (498)
++.|+|+|+..|.. .+.+++|+.+.. + +.|-.. +. + |..+.....++..+|+++|++
T Consensus 5 ~~~I~g~g~~~P~~~~~~~~~~~~~~~--~-----~~~i~~----~~-----G------i~~R~~~~~~~~~~la~~Aa~ 62 (331)
T 2x3e_A 5 AAVVCGLGSYLPEAVLSNDMLAAELDT--S-----DAWISS----RT-----G------VRQRHIAGDLGSGDLALRAAS 62 (331)
T ss_dssp EEEEEEEEEECCSCEEEHHHHHHHTTC--C-----HHHHHH----HH-----C------CCEEECCTTCCHHHHHHHHHH
T ss_pred eeEEEEEEEECCCcEecHHHHHHHhCC--C-----HHHHHH----hh-----C------ceEEEecCCCCHHHHHHHHHH
Confidence 68999999999987 567777765421 1 011000 00 0 111111111567899999999
Q ss_pred HHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCC-CCccc
Q 010896 166 RALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLM-GPNYS 244 (498)
Q Consensus 166 ~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~-Gp~~t 244 (498)
+||+|+|+ ++++ .|++|++.+. ......+.+++..||++ +|+++
T Consensus 63 ~al~~ag~-----~~id----~vi~~t~~~~--------------------------~~~p~~a~~v~~~lgl~~~~~~~ 107 (331)
T 2x3e_A 63 AALASAGL-----ERVD----AVVLATSTGD--------------------------FCCPATAPRVAARLGLVGALAFD 107 (331)
T ss_dssp HHHHHHTC-----SCCS----EEEEECSSCS--------------------------EEESCSHHHHHHHTTCTTSEEEE
T ss_pred HHHHhCCc-----ccCC----EEEEEeCCCC--------------------------CCCChHHHHHHHHhCCCCCcEEE
Confidence 99999998 2344 6788875321 11123678999999998 79999
Q ss_pred cccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeEEE
Q 010896 245 ISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324 (498)
Q Consensus 245 v~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaaav 324 (498)
|+++|+|++.||..|+++|++|++|.+||+|+|. +++.. . ++...+++++||||+++
T Consensus 108 v~~aCas~~~Al~~A~~~i~~g~~~~vLv~g~e~-~s~~~---------------------~-~~d~~~~~~~GdGA~A~ 164 (331)
T 2x3e_A 108 LSAAATGFVYGLASVGSLISAGLADSALLVGVDT-FSHTL---------------------D-PADRSTRALFGDGAGAV 164 (331)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-GGGGS---------------------C-TTCHHHHHHBCCEEEEE
T ss_pred EcCcChHHHHHHHHHHHHHHcCCCCEEEEEEeec-cccCC---------------------C-ccccccceeeccccEEE
Confidence 9999999999999999999999999999999997 33320 0 11234689999999999
Q ss_pred EEcchHHHHhcCCcEEEEEEeEEEecCCC---CCCCCC----------------CCh--------HHHHHHHHHHHHHcC
Q 010896 325 VMESLEHAMKRGANIIAEYLGGAVTCDAH---HMTDPR----------------SDG--------LGVSSCIAKSLEDAG 377 (498)
Q Consensus 325 vLe~~~~A~~~g~~i~a~I~g~~~~~dg~---~~~~p~----------------~~~--------~~~~~~i~~Al~~Ag 377 (498)
||++.++| ++..+++. ...+|+. .+..|. .++ ..+.++++++|+++|
T Consensus 165 vL~~~~~a--~~~~i~~~----~~~~dg~~~~~~~~p~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~ag 238 (331)
T 2x3e_A 165 VLRAGDAE--EEGALLAF----DLGSDGHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQMSDSVRRVLDRVG 238 (331)
T ss_dssp EEEEECTT--STTBEEEE----EEEECGGGTTSEEEECCCHHHHHHTCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEecCCC--CCCceEEE----EEEEcCCCCCeEEecCCCCCCCCccCcCceEEecCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99987654 34555543 3334432 122221 123 567889999999999
Q ss_pred CCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCC
Q 010896 378 VSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNL 456 (498)
Q Consensus 378 l~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~ 456 (498)
++++|||||++|+++++.+|. +.+.++- ..+++. .+..+||+.+|+..+.|..+ ++.+.+
T Consensus 239 l~~~did~~~~H~~~~~~~d~-----~~~~lg~~~~~~~~--~~~~~Gnt~sAs~~~~L~~~---~~~~~~--------- 299 (331)
T 2x3e_A 239 WQASDLHHLVPHQANTRILAA-----VADQLDLPVERVVS--NIAEVGNTVAASIPLALAHG---LRQGIL--------- 299 (331)
T ss_dssp CCGGGCSEEEECCCCHHHHHH-----HHHHHTCCGGGBCC--CHHHHCBCGGGHHHHHHHHH---HHTTCS---------
T ss_pred CCHHHCCEEEEcCCCHHHHHH-----HHHHcCCCHHHHhh--hHhhhCcHHHHHHHHHHHHH---HHhCCC---------
Confidence 999999999999999999885 4555653 123332 45789999999988877654 334332
Q ss_pred CCCCCcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 457 EPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 457 ~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
.+.+.+++.+||.|.+..+++|+-
T Consensus 300 ---------------~~G~~vll~~~G~G~~~~~~~l~~ 323 (331)
T 2x3e_A 300 ---------------RDGGNMVLTGFGAGLTWGSVALRW 323 (331)
T ss_dssp ---------------CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred ---------------CCCCEEEEEEEeHHhhheeeEEEE
Confidence 123578899999999999999864
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-26 Score=236.36 Aligned_cols=311 Identities=13% Similarity=0.077 Sum_probs=209.2
Q ss_pred EEEEeeceecCCC-CCHHHHHHHHHcCCCCcccCCCC-----CCCCCCccc-ccccCCCCCCCCCCccccccCCHHHHHH
Q 010896 88 IVITGMGLVSVFG-SDIDKFYNKLLEGESGISPIDRF-----DASSFSVRF-GGQIRDFSSKGYIDGKNDRRLDDCWRYC 160 (498)
Q Consensus 88 V~ItG~g~~~p~g-~~~~~~~~~L~~g~~~i~~~~~~-----~~~~~~~~~-~g~i~~~d~~~~i~~~~~~~~d~~~~l~ 160 (498)
+.|+|+|+..|.. .+.+++|+.+......... ++| ...+...+. ....+.|+..+-++++.....++..+|+
T Consensus 10 ~~I~gig~~~P~~~v~~~~l~~~~~~~~~~~~~-~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~~~r~~~~~~~~~~la 88 (382)
T 1u0m_A 10 ATLCRPSVSVPEHVITMEETLELARRRHTDHPQ-LPLALRLIENTGVRTRHIVQPIEDTLEHPGFEDRNKVYEREAKSRV 88 (382)
T ss_dssp CEECCCEEECCSEEEEHHHHHHHHHHHHTTCTT-HHHHHHHHHHTCCCEEEESSCHHHHTSCCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEeCCCcccCHHHHHHHHHHhccChhh-HHHHHHHHHhcCCCcceeecChhhhccCCChhHHHHHHHHHHHHHH
Confidence 7899999999987 6788898877543100000 001 011111111 1111112211113344444456678999
Q ss_pred HHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCC
Q 010896 161 LVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMG 240 (498)
Q Consensus 161 l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~G 240 (498)
++|+++||+++|++ +++++ .|++++..+ +. ....+.+|+..||+++
T Consensus 89 ~~Aa~~aL~~agl~---~~~id----~vi~~t~~~----------------------~~-----~p~~a~~v~~~lGl~~ 134 (382)
T 1u0m_A 89 PAVIQRALDDAELL---ATDID----VIIYVSCTG----------------------FM-----MPSLTAWLINEMGFDS 134 (382)
T ss_dssp HHHHHHHHHHHTCC---GGGCS----EEEEECSSS----------------------CC-----SSCHHHHHHHHTTCCT
T ss_pred HHHHHHHHHHhCCC---HHHCC----EEEEEecCC----------------------CC-----CCcHHHHHHHHhCCCC
Confidence 99999999999994 44555 577776421 11 1235789999999998
Q ss_pred --Ccccc-ccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCC----
Q 010896 241 --PNYSI-STACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRD---- 313 (498)
Q Consensus 241 --p~~tv-~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~---- 313 (498)
|++++ +++|+|++.||..|+++|++|++|.+||+|+|.. ++. .+|+|.+++
T Consensus 135 ~~~~~~v~~~aCss~~~Al~~A~~~i~~g~~~~vLv~g~e~~-s~~---------------------~~~~d~~~~~~~~ 192 (382)
T 1u0m_A 135 TTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFC-SLC---------------------YQPTDLGVGSLLC 192 (382)
T ss_dssp TCEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEG-GGG---------------------CCTTCCSHHHHHH
T ss_pred CcceEEccCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEecc-chh---------------------cCcccCCHHHhhc
Confidence 88999 8999999999999999999999999999999963 221 134554433
Q ss_pred CccccceeEEEEEcchHHHHhcCCcEEEEEEeEEE--ecCCCC----------------CCCCCCChHHHHHHHHHHHHH
Q 010896 314 GFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAV--TCDAHH----------------MTDPRSDGLGVSSCIAKSLED 375 (498)
Q Consensus 314 G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~--~~dg~~----------------~~~p~~~~~~~~~~i~~Al~~ 375 (498)
++++||||+++||++.+. +|. +|.++.. ..|+.+ ...+......+. +++++|++
T Consensus 193 ~~lfGDGA~A~vL~~~~~---~g~----~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~-~i~~aL~~ 264 (382)
T 1u0m_A 193 NGLFGDGIAAAVVRGRGG---TGV----RLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATMEPLAP-ALKELAGE 264 (382)
T ss_dssp HHHBCEEEEEEEEETTTC---SEE----EEEEEEEEECSSCTTTEEEEEETTEEEEEECTTTGGGHHHHHH-HHHHHHHT
T ss_pred cchhcCCcEEEEEeccCC---CCc----EEEEeeeEecCChHHhcCceecCCceEEEeCcHHHHHHHHHHH-HHHHHHHH
Confidence 899999999999997653 333 3444433 333321 011222346677 99999999
Q ss_pred cCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccc-cccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCC
Q 010896 376 AGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKM-NGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQ 453 (498)
Q Consensus 376 Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v-~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~ 453 (498)
+|++++|||||++|+++++.+|. +.+.++- ..++++ ...+..+||+.+|+..+.|..++ +.+.+.
T Consensus 265 agl~~~dId~v~~H~~~~~i~d~-----~~~~lgl~~~k~~~s~~~~~~~Gnt~sAsi~~~L~~~~---~~g~~~----- 331 (382)
T 1u0m_A 265 HGWDASDLDFYIVHAGGPRILDD-----LSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLF---DEGGVE----- 331 (382)
T ss_dssp TSCCSSCCSCCEEECSHHHHHHH-----HHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHHH---HSCCCC-----
T ss_pred cCCCHHHCCEEEECCCCHHHHHH-----HHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHH---HhcCCC-----
Confidence 99999999999999999998775 4445553 223333 25688999999999888776654 333321
Q ss_pred CCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 454 DNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 454 ~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
+.+.+++.+||.|.+..+++|+-
T Consensus 332 -------------------~Gd~vll~~~G~G~t~~~~vl~~ 354 (382)
T 1u0m_A 332 -------------------EGARGLLAGFGPGITAEMSLGCW 354 (382)
T ss_dssp -------------------SSCCCEEEEEETTTEEEEEEEEE
T ss_pred -------------------CCCEEEEEEEcccceeEEEEEEE
Confidence 12456778999999998988864
|
| >4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-26 Score=243.64 Aligned_cols=307 Identities=11% Similarity=0.032 Sum_probs=202.7
Q ss_pred HHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhc
Q 010896 158 RYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTG 237 (498)
Q Consensus 158 ~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lg 237 (498)
.|+.+++++||+|||+++ +.++..-.|++++....... ............+..++..+|
T Consensus 44 dL~a~Ai~~AL~dAGl~p---~~Vd~vI~g~~~~~~~~~~~------------------~~~~~~g~~~~~~~~va~~lG 102 (520)
T 4egv_A 44 ELATEAAKAALHDCGADA---DTVARAIDTVAGTRQFEISG------------------PASAPLGVSSNYPRSVARNIG 102 (520)
T ss_dssp HHHHHHHHHHHHHTSSCH---HHHHHHCCEEEECCC--------------------------------CCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCcCH---HHcceEEEEEeecccccccc------------------hhhhhhccccCHHHHHHHHcC
Confidence 688999999999999954 34443334655543211000 001111233445677888999
Q ss_pred CCC-CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHH-----------------------------
Q 010896 238 LMG-PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGG----------------------------- 287 (498)
Q Consensus 238 l~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~----------------------------- 287 (498)
+.+ +.++++.+|+|++.+|+.|++.|++|++|++|+||+|.+.+...+..
T Consensus 103 l~~~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 182 (520)
T 4egv_A 103 ADPAHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRGYGYDGIFDEY 182 (520)
T ss_dssp CCCSEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC----------------------------------CT
T ss_pred CCCceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCccccccccccccccccchhHHHH
Confidence 987 67788999999999999999999999999999999998632110000
Q ss_pred ---------------Hhhc-----c-----------cccc---C--CCCCCCCC--------------------CcCCCC
Q 010896 288 ---------------FIAC-----R-----------ALSQ---R--NEYPKRAS--------------------RPWDKD 311 (498)
Q Consensus 288 ---------------~~~~-----~-----------~ls~---~--~~~p~~~~--------------------rpfd~~ 311 (498)
+... + .+.. + ..+|+... .|+..-
T Consensus 183 ~~~~g~~~~~~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~~a~~np~a~~r~~~t~E~l~~l~p~~r~i~~p~~ta 262 (520)
T 4egv_A 183 TIRHGLIGAPVQYGLLENARRARLGLSVADYRLAMAELFAPFSKVAAKNPYSSAPTERSVEELLTVTASNRMIVDPYPRL 262 (520)
T ss_dssp TGGGTCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHCTTSSSCCCCCHHHHHSCCSSSCEEETTEEGG
T ss_pred HHHhCCCcHHHHHHHHHHHHHHHHccccchhhhheeEEEEecccccccCccccccCCCCHHHhcccCcccccccCCcccc
Confidence 0000 0 0000 0 00011110 122222
Q ss_pred CCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCC--CCCCC-CChHHHHHHHHHHHHHcCCCCCCcCEEEc
Q 010896 312 RDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHH--MTDPR-SDGLGVSSCIAKSLEDAGVSPEEVNYVNA 388 (498)
Q Consensus 312 ~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~--~~~p~-~~~~~~~~~i~~Al~~Agl~~~dId~i~~ 388 (498)
.|...+.|||+++||++++.|++.|.+++++|.+++....... ...|+ ..+.++..+++++|+++|++++|||++|+
T Consensus 263 ~nas~isDGAAAvVL~S~e~A~~lGl~p~a~I~~~a~a~~~~~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~E~ 342 (520)
T 4egv_A 263 MVARDQVNQGAALLMMSVESARKLGVPEEKWVYLRGHADMKEPKLLERADIGASPASVTAVNEALRVAGIGLDDVAAFDL 342 (520)
T ss_dssp GCC--CCCEEEEEEEEEHHHHHHHTCCGGGCEEEEEEEEEECCCGGGCSCTTCCHHHHHHHHHHHHHHTCCGGGEEEEEE
T ss_pred cccCCCCcceEEEEEeeHHHHHHcCCCCceEEEEEEEeccCCcccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEE
Confidence 3556678999999999999999999999888888776543221 22222 13567889999999999999999999999
Q ss_pred cCCCCccCcHHHHHHHHHHhcC----CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCc
Q 010896 389 HATSTLAGDLAEVNAIKKVFKD----TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDT 464 (498)
Q Consensus 389 hgtgt~~~D~~E~~al~~~f~~----~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~ 464 (498)
|... .++..+..+.+|- ..++++++.+.++||+++|+|+..+++++++|+++..+..++ .+|+.+++..
T Consensus 343 ~dAF-----~~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v~~lr~~~~~~~L~--~~~gg~~~~~ 415 (520)
T 4egv_A 343 YSCF-----PFPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEAVNEMRDKPGQFALV--GANGGIASKY 415 (520)
T ss_dssp CCSS-----SHHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHHHHHHHHSTTCEEEE--EEEETTTTEE
T ss_pred eCCc-----HHHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHHHHHHhcCCCCceEE--eCCCCeeeee
Confidence 9543 3445555556652 457899999999999999999999999999999998887766 4677776543
Q ss_pred C----CCccc----ccCccEEEEEccccccceeeEEEeeCC
Q 010896 465 V----PNVKK----QHHVNVAISNSFGFGGHNSVVVFAPFS 497 (498)
Q Consensus 465 v----~~~~~----~~~~~~alv~s~G~gG~n~~~vl~~~~ 497 (498)
. ..+.. ...++++.+++ +|+|+|+++.+
T Consensus 416 ~~~~l~~~~~~w~~~~~~~~~~~~~-----~~~~~~~~~~~ 451 (520)
T 4egv_A 416 SVGIYSTEPADWVADNSAQLQAEHD-----AQPKVAITEKA 451 (520)
T ss_dssp EEEEEESSCCCCCCCCHHHHHHHHH-----TSCCCCBCSSC
T ss_pred eEEEEcCCCCCCCCCCCCccccccc-----CCCCcccccCC
Confidence 1 11111 22245566655 78898887653
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-25 Score=229.75 Aligned_cols=319 Identities=12% Similarity=0.061 Sum_probs=212.0
Q ss_pred CCcEEEEeeceecCCC-CCHHHHHHHHHcCCCCcccCCCC-----CCCCCCccc-ccccCCCCCCCC-CCccccccC---
Q 010896 85 KKRIVITGMGLVSVFG-SDIDKFYNKLLEGESGISPIDRF-----DASSFSVRF-GGQIRDFSSKGY-IDGKNDRRL--- 153 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g-~~~~~~~~~L~~g~~~i~~~~~~-----~~~~~~~~~-~g~i~~~d~~~~-i~~~~~~~~--- 153 (498)
..+|.|+|+|+.+|.. .+.+++|+.+....+.-.+..+| ...+...+. ...-..||+.++ ++..+...+
T Consensus 11 ~~~v~I~g~g~~~P~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (374)
T 2h84_A 11 NNNSFVLGIGISVPGEPISQQSLKDSISNDFSDKAETNEKVKRIFEQSQIKTRHLVRDYTKPENSIKFRHLETITDVNNQ 90 (374)
T ss_dssp -CCCEEEEEEEECSSSCEEHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCCCEECCSSCTTSGGGCGGGGGGCCHHHHHHH
T ss_pred CCCeEEEEEEEeCCCcccCHHHHHHHHHHhhccChHHHHHHHHHHHhCCcCcceeecCccccccccccCChHHHHHHHHH
Confidence 3469999999999987 56889998875422100000000 011111111 000012555555 455555555
Q ss_pred --CHHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHH
Q 010896 154 --DDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSAL 231 (498)
Q Consensus 154 --d~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ 231 (498)
++..+|+++|+++||+++|++ +++++ ++++|+..+ +. ....+.+
T Consensus 91 ~~~~~~~la~~Aa~~al~~ag~~---~~~id----~vi~~t~~~----------------------~~-----~p~~a~~ 136 (374)
T 2h84_A 91 FKKVVPDLAQQACLRALKDWGGD---KGDIT----HIVSVTSTG----------------------II-----IPDVNFK 136 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSC---GGGCC----EEEEEESSC----------------------CC-----SSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCC---HHHCC----EEEEEeeCC----------------------CC-----CCcHHHH
Confidence 788999999999999999994 44555 677787421 11 1235789
Q ss_pred HHHhhcCCC--Cccccc-cccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcC
Q 010896 232 LAIDTGLMG--PNYSIS-TACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPW 308 (498)
Q Consensus 232 ia~~lgl~G--p~~tv~-~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpf 308 (498)
|+..||+++ |+++|. ++|+|++.||..|+++|++|++|.+||+|+|.+. +. +. .|.
T Consensus 137 v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~i~~g~~~~vLv~g~e~~s-~~----------~~----------~~~ 195 (374)
T 2h84_A 137 LIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCS-LH----------FS----------NTD 195 (374)
T ss_dssp HHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHTTCTTCEEEEEEEECCG-GG----------CC----------CSS
T ss_pred HHHHcCcCCCCceEEecCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEEecc-hh----------hc----------CCC
Confidence 999999998 789996 8999999999999999999999999999999732 11 00 122
Q ss_pred CCC--CCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEe--cCCCC------------C----CCCCCChHHHHHH
Q 010896 309 DKD--RDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVT--CDAHH------------M----TDPRSDGLGVSSC 368 (498)
Q Consensus 309 d~~--~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~--~dg~~------------~----~~p~~~~~~~~~~ 368 (498)
|.+ .+++++||||+++||++.+.+..++ ++ +|.+.+.. .++.. + ..|......+.++
T Consensus 196 dr~~~~~~~lfGDGA~A~vL~~~~~~~~~~--~~-~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~ 272 (374)
T 2h84_A 196 GGDQMVASSIFADGSAAYIIGCNPRIEETP--LY-EVMCSINRSFPNTENAMVWDLEKEGWNLGLDASIPIVIGSGIEAF 272 (374)
T ss_dssp SHHHHHHHHHBCCEEEEEEEESSCCTTCCC--CE-EEEEEEEEECSSCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHH
T ss_pred CHHHHhhhhhhccCcEEEEEecCCCcccCC--ce-eEEeeeeEEeCCCcccceeEEecCcEEEEeCchHHHHHHHHHHHH
Confidence 211 1479999999999999876543232 44 66665543 11110 0 0010112467789
Q ss_pred HHHHHHHcC------CCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCccccc-ccccccCCcchhhhHHHHHHHHH
Q 010896 369 IAKSLEDAG------VSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMN-GTKSMIGHGLGAAGGLEAITTIK 440 (498)
Q Consensus 369 i~~Al~~Ag------l~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~-s~K~~~Gh~~~AaG~~~li~a~~ 440 (498)
++++|+++| ++++||||| +|+++++..|.+ .+.++- ..+++++ .+...+||+.+|+-.+.|..++
T Consensus 273 i~~~L~~ag~~~~~~l~~~did~~-~H~~~~~i~d~~-----~~~lgl~~~k~~~s~~~~~~~Gnt~sasi~~~L~~~~- 345 (374)
T 2h84_A 273 VDTLLDKAKLQTSTAISAKDCEFL-IHTGGKSILMNI-----ENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHAR- 345 (374)
T ss_dssp HHHHHHHHTTTSCSCCCSSSSEEE-ECCCCHHHHHHH-----HHHTTCCGGGGHHHHHHHHHHCBCTTHHHHHHHHHHH-
T ss_pred HHHHHHhcCCccccCCChhhcCEe-ECCCCHHHHHHH-----HHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHH-
Confidence 999999999 999999999 999999987754 344543 2234433 5567899999998777666654
Q ss_pred HhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEeeC
Q 010896 441 AITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 441 ~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
+.+. +.+.+++.+||.|-+..+++|+..
T Consensus 346 --~~~~--------------------------~Gd~vll~~~G~G~t~~~~ll~~~ 373 (374)
T 2h84_A 346 --KSKS--------------------------LPTYSISLAFGPGLAFEGCFLKNV 373 (374)
T ss_dssp --TCSC--------------------------CCSEEEEEEEETTTEEEEEEEEEC
T ss_pred --hhcC--------------------------CCCeEEEEEeccchhhhhhhheec
Confidence 2211 125677889999988888888753
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.4e-25 Score=251.29 Aligned_cols=329 Identities=13% Similarity=0.055 Sum_probs=221.0
Q ss_pred CCcEEEEeeceecCCC-------------CCHHHHHHHH------HcCCCCcccCCCCCCCCCCcccccccCCCCCCCCC
Q 010896 85 KKRIVITGMGLVSVFG-------------SDIDKFYNKL------LEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYI 145 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g-------------~~~~~~~~~L------~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i 145 (498)
..++.|+|+|..+|.+ .+.+++|+.+ ..++++|.....++...+... .|++..++
T Consensus 601 ~~~~~I~g~g~~~P~~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~sGI~~r~~~~~~~~~~~------~~~~~~~~ 674 (979)
T 3tsy_A 601 KGPATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTALKKKFNRICDKSMIKKRYIHLTEEMLEE------HPNIGAYM 674 (979)
T ss_dssp CSCEEEEEEEEECCSCEEEHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEEECSCCHHHHHH------CHHHHSSS
T ss_pred cCCceeecccCCCCCCccCHHHHHHHHHHhccccchHHHHHHHHHHHHhcCcceeeEecChhhhhc------Cccccccc
Confidence 4579999999999988 4444555555 445666665443332211111 12222222
Q ss_pred Cc----cccccCCHHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCcccc
Q 010896 146 DG----KNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIP 221 (498)
Q Consensus 146 ~~----~~~~~~d~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (498)
.+ ++.+.++....|+++|+++||++||++ ++++| .++++++.+
T Consensus 675 ~~~~~~r~~~~~~~~~~la~~Aa~~AL~~agl~---~~dId----~ii~~t~~~-------------------------- 721 (979)
T 3tsy_A 675 APSLNIRQEIITAEVPKLGKEAALKALKEWGQP---KSKIT----HLVFCTTSG-------------------------- 721 (979)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSC---GGGCC----EEEEEESSC--------------------------
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC---HHHCC----EEEEEeeCC--------------------------
Confidence 33 333444456779999999999999994 44555 477776211
Q ss_pred chhhhhhHHHHHHhhcCCCCc---cccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCC
Q 010896 222 YSITNMGSALLAIDTGLMGPN---YSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRN 298 (498)
Q Consensus 222 ~~~~n~~a~~ia~~lgl~Gp~---~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~ 298 (498)
......+.+|+..||++++. +.++++|++++.||..|+++|++|.++.|||+|+|...... .
T Consensus 722 -~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~sG~~~~vLvvg~e~~~~~~-----------~--- 786 (979)
T 3tsy_A 722 -VEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTF-----------R--- 786 (979)
T ss_dssp -CCSSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECTTTTC-----------C---
T ss_pred -CCCCcHHHHHHHHcCCCcccEEEeeeccccHhHHHHHHHHHHHHHhCCCCEEEEEEEEecchhe-----------e---
Confidence 11235788999999999765 88999999999999999999999999999999999621110 0
Q ss_pred CCCCCCCCcCCCCCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCC----------------h
Q 010896 299 EYPKRASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSD----------------G 362 (498)
Q Consensus 299 ~~p~~~~rpfd~~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~----------------~ 362 (498)
....+.++...+++++||||+|+||++.+.+..++..++....+.....+..+...+.+. .
T Consensus 787 ---~~~~~~~~~~~~~~lfGDGA~A~vL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 863 (979)
T 3tsy_A 787 ---GPSEDALDSLVGQALFGDGSAAVIVGSDPDISIERPLFQLVSAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLIS 863 (979)
T ss_dssp ---CCCSSCHHHHHHHHHBCCEEEEEEEESSCCSSSCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHH
T ss_pred ---CCCccCHHHHhhhhhccCceEEEEEecCCCccccCcceEEEeeeeEEecCchhheEEEEecCceEEEEchHHHHHHH
Confidence 001112222234688999999999998877666777788877777766555433222111 1
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCccccc-ccccccCCcchhhhHHHHHHHHH
Q 010896 363 LGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMN-GTKSMIGHGLGAAGGLEAITTIK 440 (498)
Q Consensus 363 ~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~-s~K~~~Gh~~~AaG~~~li~a~~ 440 (498)
..+.++++++|+++|++++||||+++|.+++...|.+|. .++- ...+..+ .....+||+.+||=.+.|..+..
T Consensus 864 ~~~~~~~~~al~~agl~~~did~~~~Hq~~~~i~~~~~~-----~lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~~~~ 938 (979)
T 3tsy_A 864 ENVEKCLTQAFDPLGISDWNSLFWIAHPGGPAILDAVEA-----KLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRK 938 (979)
T ss_dssp HHHHHHHHHHHGGGTCCCGGGSEEEECCSCHHHHHHHHH-----HHTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCcccceEEECCCChHHHHHHHH-----HcCCChHHHHHHHHHHHHcCCcchhhHHHHHHHHHh
Confidence 236789999999999999999999999999888775543 3432 2223222 23566899999998888877655
Q ss_pred HhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 441 AITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 441 ~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
.++.|-. +. ........+..+||.|-+..+++++-
T Consensus 939 ~~~~G~~-----------------v~---~g~~~~~~ll~~~G~G~t~~~~~l~~ 973 (979)
T 3tsy_A 939 KSLKGER-----------------AT---TGEGLDWGVLFGFGPGLTIETVVLHS 973 (979)
T ss_dssp HHHHTTC-----------------SB---TTTTCSEEEEEEECGGGEEEEEEEEC
T ss_pred hhccccc-----------------cc---CCCCcceeEEEEeCCchHHHHHHHHh
Confidence 4444311 10 11234567888999998888888874
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=99.88 E-value=8.8e-23 Score=209.47 Aligned_cols=253 Identities=14% Similarity=0.130 Sum_probs=179.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHH
Q 010896 155 DCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAI 234 (498)
Q Consensus 155 ~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~ 234 (498)
....|+++|+++||+++|+++ ++++ .+++++..+ +. ....+.+|+.
T Consensus 112 ~~~~la~~Aa~~aL~~agl~~---~~Id----~vi~~t~~~----------------------~~-----~p~~a~~v~~ 157 (393)
T 1ted_A 112 HAVPLAVDVSKRALAGLPYRA---AEIG----LLVLATSTG----------------------FI-----APGVDVAIVK 157 (393)
T ss_dssp HHHHHHHHHHHHHHTTCCCCG---GGEE----EEEEEESSC----------------------CC-----SSCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCCH---HHCC----EEEEEEeCC----------------------Cc-----cChHHHHHHH
Confidence 567999999999999999943 3443 466676421 11 1235789999
Q ss_pred hhcCCCC--cccc-ccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCC
Q 010896 235 DTGLMGP--NYSI-STACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKD 311 (498)
Q Consensus 235 ~lgl~Gp--~~tv-~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~ 311 (498)
.||++++ .+++ +++|+|++.||..|+++|++|.+|.+||+|+|.+. +. + + |+.+
T Consensus 158 ~lGl~~~~~~~~v~~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~s-~~----------~-----------~-~~~~ 214 (393)
T 1ted_A 158 ELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCS-VN----------A-----------V-FADD 214 (393)
T ss_dssp HHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEECG-GG----------C-----------C-CCSS
T ss_pred HcCcCCCcceeEeccchhHHHHHHHHHHHHHHHcCCCCEEEEEEEEecc-cc----------C-----------C-CCCC
Confidence 9999985 4777 89999999999999999999999999999999732 11 0 0 3334
Q ss_pred CC----CccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEe--cCCCCC----------------CCCCCChHHHHHHH
Q 010896 312 RD----GFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVT--CDAHHM----------------TDPRSDGLGVSSCI 369 (498)
Q Consensus 312 ~~----G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~--~dg~~~----------------~~p~~~~~~~~~~i 369 (498)
++ ++++||||+++||++.+.+..++. .+++|.+++.. .|+... ..+......+.+++
T Consensus 215 r~~~~~~~lfGDGA~A~vL~~~~~~~~~~~-~~~~i~~~~~~~~~d~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i 293 (393)
T 1ted_A 215 INDVVIHSLFGDGCAALVIGASQVQEKLEP-GKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVV 293 (393)
T ss_dssp HHHHHHHHHBCEEEEEEEEEEECTTSCCCT-TCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHH
T ss_pred HHHhhhhhhhcCccEEEEEecCCCccccCc-ceeeeeccceEEcCCchhhccceecCCCeEEecCchHHHHHHHHHHHHH
Confidence 44 899999999999998664433333 45678887544 555321 00111234677899
Q ss_pred HHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCccccc-ccccccCCcchhhhHHHHHHHHHHhhcCcc
Q 010896 370 AKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMN-GTKSMIGHGLGAAGGLEAITTIKAITTGWL 447 (498)
Q Consensus 370 ~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~-s~K~~~Gh~~~AaG~~~li~a~~~L~~g~i 447 (498)
+++|+++|++++|||||.+|++++...|.+| +.++- ..++.++ .....+||+.+|+-.+.|..++ +.+.+
T Consensus 294 ~~aL~~agl~~~dId~~~~H~~~~~i~d~~~-----~~lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L~~~~---~~g~~ 365 (393)
T 1ted_A 294 TEMLWDNGLQISDIDLWAIHPGGPKIIEQSV-----RSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMV---QQAES 365 (393)
T ss_dssp HHHHHHTTCCGGGCSCEEECCSCHHHHHHHH-----HHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHH---HSCSS
T ss_pred HHHHHHcCCCHhHCCEEEECCCcHHHHHHHH-----HHcCCCHHHHHHHHHHHHhhCCchHhHHHHHHHHHH---hcCcc
Confidence 9999999999999999999999999887654 33442 2233332 4567899999988666554432 33321
Q ss_pred CCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEeeC
Q 010896 448 HPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 448 pp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
..+.+.+++.+||.|.+..+++|+..
T Consensus 366 -----------------------~~~Gd~vll~~~G~G~t~~~~~l~~~ 391 (393)
T 1ted_A 366 -----------------------AKAISTGVAFAFGPGVTVEGMLFDII 391 (393)
T ss_dssp -----------------------SSSSEEEEEEEEETTTEEEEEEEEEC
T ss_pred -----------------------CCCCCeEEEEEeccchhhhhhheeec
Confidence 01236788899999999999998754
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.7e-21 Score=195.52 Aligned_cols=292 Identities=18% Similarity=0.266 Sum_probs=193.0
Q ss_pred cEEEEeeceecCCC-CCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccc-cccCCHHHHHHHHHH
Q 010896 87 RIVITGMGLVSVFG-SDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKN-DRRLDDCWRYCLVAG 164 (498)
Q Consensus 87 ~V~ItG~g~~~p~g-~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~-~~~~d~~~~l~l~aa 164 (498)
+|.|+|+|...|.. .+.+++|+.+.+. ++...+.|-.. +. . |..+. ...-.+...|+++|+
T Consensus 11 ~v~I~g~g~~lP~~~v~~~~l~~~l~~~--~~~~~~~~i~~----rt-----g------i~~r~~~~~~~~~~~la~~Aa 73 (333)
T 4dfe_A 11 YSRVLGTGSYLPPNRVTNQDLAKRLAEQ--GIETSDEWIVA----RT-----G------IHARYFAEPDVTTSDLAFIAS 73 (333)
T ss_dssp EEEEEEEEEECCSEEEEHHHHHHHHC-----CCCCHHHHHH----HH-----C------CSEEEECCTTCCHHHHHHHHH
T ss_pred ceEEEEEEEECCCcEEcHHHHHHHhccc--cCCCCHHHhHH----hc-----C------ceEEEEcCCCCCHHHHHHHHH
Confidence 69999999999986 6889999987431 11110111000 00 0 00110 001124678999999
Q ss_pred HHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcC--CCCc
Q 010896 165 RRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGL--MGPN 242 (498)
Q Consensus 165 ~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl--~Gp~ 242 (498)
++||+++|++ +++++ .|++++..+. ......+.+|+..||+ +.|+
T Consensus 74 ~~al~~ag~~---~~~Id----~vi~~t~~~~--------------------------~~~p~~a~~v~~~lgl~~~~~~ 120 (333)
T 4dfe_A 74 QRAIEAADID---PQSID----LIIVATSTPD--------------------------FVFPSTACLLQNKLGIRNHGAA 120 (333)
T ss_dssp HHHHHHHTCC---GGGCC----EEEEECSSCS--------------------------SSBSCHHHHHHHHTTCCSCCEE
T ss_pred HHHHHHcCCC---HHHCC----EEEEEeCCCC--------------------------CCCCcHHHHHHHHhCCCCCCcE
Confidence 9999999994 44555 6888874321 1123457889999999 5799
Q ss_pred cccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeE
Q 010896 243 YSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCG 322 (498)
Q Consensus 243 ~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaa 322 (498)
++|+++|+|++.||..|+++|++|+++.+||+|+|.+.... .|+....++++||||+
T Consensus 121 ~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~-----------------------~~~d~~~~~lfGDGA~ 177 (333)
T 4dfe_A 121 FDVQAVCSGFAYAVATADSFIRSGQHRTALVIGAETFSRIL-----------------------DFKDRTTCVLFGDGAG 177 (333)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGGC-----------------------CTTCTTTTTTBCEEEE
T ss_pred EEeCcccHHHHHHHHHHHHHHHcCCCCEEEEEEeecccccc-----------------------CcccccceeeeccccE
Confidence 99999999999999999999999999999999999732111 1222346789999999
Q ss_pred EEEEcchHHHHhcCCcEEEEEEeEEEecCCCC---CCCC--------------CCCh--------HHHHHHHHHHHHHcC
Q 010896 323 ILVMESLEHAMKRGANIIAEYLGGAVTCDAHH---MTDP--------------RSDG--------LGVSSCIAKSLEDAG 377 (498)
Q Consensus 323 avvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~---~~~p--------------~~~~--------~~~~~~i~~Al~~Ag 377 (498)
|+||++.+ +..+ .++...+|+.. ...| ..++ ..+.++++++|+++|
T Consensus 178 A~vl~~~~-----~~~i----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~g 248 (333)
T 4dfe_A 178 AVILQASD-----EPGV----LASALHADGSHSNILCTPGNVNGGVVSGSAFLHMDGQAVFKLAVNVLEKVAVEALEKAN 248 (333)
T ss_dssp EEEEEEES-----SCSE----EEEEEEECGGGGGGEEBCEEEETTEEEECCSCEECHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEEEcC-----CCCe----EEEEEEEccCCcCeEEECCCCCCcccccCcceeeccHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999754 2233 23333333321 0001 1112 456788999999999
Q ss_pred CCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCC
Q 010896 378 VSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNL 456 (498)
Q Consensus 378 l~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~ 456 (498)
++++|||++.+|..+....| .+.+.++- ..++. .....+||+.+|+=.+.|..+ ++.|.+.
T Consensus 249 l~~~did~~~~Hq~~~~i~~-----~~~~~lgl~~~~~~--~~l~~~GNt~sasi~~~L~~~---~~~g~~~-------- 310 (333)
T 4dfe_A 249 LSAEQIDWLIPHQANIRIMQ-----STCRKLGLPQERMI--VTVGEHGNTSAASIPLALDVA---VRDGRIK-------- 310 (333)
T ss_dssp CCGGGCSEEEECCSCHHHHH-----HHHHHTTCCGGGBC--CCHHHHCBCGGGHHHHHHHHH---HHTTCSC--------
T ss_pred CCHHHCCEEEEcCCCHHHHH-----HHHHHhCCCHHHhh--hhHHhcCchHHHHHHHHHHHH---HHcCCCC--------
Confidence 99999999999988766543 44445542 12222 245578999999866665544 3343321
Q ss_pred CCCCCcCcCCCcccccCccEEEEEccccccceeeEEEe
Q 010896 457 EPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494 (498)
Q Consensus 457 ~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~ 494 (498)
+.+.++..+||.|-+..+++++
T Consensus 311 ----------------~Gd~vll~~~G~G~t~~~~ll~ 332 (333)
T 4dfe_A 311 ----------------RGQNVLIEGVGGGFTWGASVIR 332 (333)
T ss_dssp ----------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred ----------------CCCEEEEEEEchhheeEEEEEE
Confidence 2246777899999998888885
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=99.87 E-value=4.5e-21 Score=193.33 Aligned_cols=308 Identities=17% Similarity=0.152 Sum_probs=202.4
Q ss_pred CcEEEEeeceecCCC-CCHHHHHHHHHc-----CCCCcccCCCCC--CCCCCcccccccCCCCCCCCCCccccccCCHHH
Q 010896 86 KRIVITGMGLVSVFG-SDIDKFYNKLLE-----GESGISPIDRFD--ASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCW 157 (498)
Q Consensus 86 ~~V~ItG~g~~~p~g-~~~~~~~~~L~~-----g~~~i~~~~~~~--~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~ 157 (498)
++|.|+|+|...|.- .+.+++.+.+.. +.+ +.|- ..+...+. +..+. ....
T Consensus 11 ~~v~I~~~g~~lP~~~v~n~~l~~~~~~~~~~~~~~-----~~~i~~~tGi~~R~-----------~~~~~-----~~~~ 69 (345)
T 3s21_A 11 QNVSIAGLAHIDAPHTLTSKEINERLQPTYDRLGIK-----TDVLGDVAGIHARR-----------LWDQD-----VQAS 69 (345)
T ss_dssp SSEEEEEEEEEECSEEEEHHHHHHHHHHHHHHHTCC-----CCHHHHTTCCSEEE-----------ECSSC-----CCHH
T ss_pred cceEEEEEEEeCCCcEEcHHHHHHHHhhcccccCCC-----HHHHHHhhCceeEE-----------ECCCC-----CCHH
Confidence 569999999999986 567777766521 211 0110 00110000 00111 1356
Q ss_pred HHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhc
Q 010896 158 RYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTG 237 (498)
Q Consensus 158 ~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lg 237 (498)
.|+.+|+++||+++|++ +++++ .|++++... .......+.+|+..||
T Consensus 70 ~La~~Aa~~al~~ag~~---~~~Id----~vi~~t~~~--------------------------~~~~p~~a~~v~~~lG 116 (345)
T 3s21_A 70 DAATQAARKALIDANIG---IEKIG----LLINTSVSR--------------------------DYLEPSTASIVSGNLG 116 (345)
T ss_dssp HHHHHHHHHHHHHHTCC---GGGCC----EEEECCSCC--------------------------SCSSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCC---HHHCC----EEEEEeCCC--------------------------CCCCChHHHHHHHHhC
Confidence 89999999999999994 45555 578876421 1112245788999999
Q ss_pred CC--CCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCc
Q 010896 238 LM--GPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGF 315 (498)
Q Consensus 238 l~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~ 315 (498)
++ .|.++|+++|+|++.||..|+++|++|+++.+||+|+|.+.... .+...+.++ ++..|++||....++
T Consensus 117 l~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~---~~~~~~~~~-----~~~~~~~f~~~~~~~ 188 (345)
T 3s21_A 117 VSDHCMTFDVANACLAFINGMDIAARMLERGEIDYALVVDGETANLVY---EKTLERMTS-----PDVTEEEFRNELAAL 188 (345)
T ss_dssp CCTTCEEEECCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCHHHH---HHHHHHHTC-----TTCCHHHHHHHHGGG
T ss_pred CCCCceEEeECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccchhh---ccccccccC-----Cccchhhhhhhccce
Confidence 96 68999999999999999999999999999999999999853321 112222232 235678898888999
Q ss_pred cccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCC--CCCC-----CCChH--------HHHHHHHHHHHHcCCCC
Q 010896 316 VMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHH--MTDP-----RSDGL--------GVSSCIAKSLEDAGVSP 380 (498)
Q Consensus 316 v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~--~~~p-----~~~~~--------~~~~~i~~Al~~Agl~~ 380 (498)
++||||+++||++.+.. ..+. .|.+.....++.+ ...+ ..+++ .+.++++++|+++|+++
T Consensus 189 ~~GdGA~A~vl~~~~~~-~~~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~ 263 (345)
T 3s21_A 189 TLGCGAAAMVMARSELV-PDAP----RYKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKLAQKTFVAAKQVLGWAV 263 (345)
T ss_dssp GBCCEEEEEEEEEGGGS-TTSC----EEEEEEEEECGGGTTC-----------CHHHHHHHHHHHHHHHHHHHHHHCCCG
T ss_pred eeccceeEEEEecCCCC-CCCc----ceeeeccccCcchhhhccccCcceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 99999999999975531 1122 3455554444321 1111 11222 34567899999999999
Q ss_pred CCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCC
Q 010896 381 EEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPE 459 (498)
Q Consensus 381 ~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~ 459 (498)
+|||++..|..+....| .+.+.++- ..++. ..-..+||+.+|+-.+.|..++ +.|.+.
T Consensus 264 ~did~~v~Hq~~~~i~~-----~~~~~lgl~~ek~~--~~l~~~GNt~sasi~~~L~~~~---~~g~~~----------- 322 (345)
T 3s21_A 264 EELDQFVIHQVSRPHTA-----AFVKSFGIDPAKVM--TIFGEHGNIGPASVPIVLSKLK---ELGRLK----------- 322 (345)
T ss_dssp GGCSEEEECCSCHHHHH-----HHHHHHTCCGGGBC--CCHHHHCBCGGGHHHHHHHHHH---HHTCCC-----------
T ss_pred HHCCEEEeCCCCHHHHH-----HHHHHcCcCHHHce--eeHhhcCchHHHHHHHHHHHHH---HcCCCC-----------
Confidence 99999999987766533 34444542 11222 2335689999998777776643 343321
Q ss_pred CCcCcCCCcccccCccEEEEEccccccceeeEEEe
Q 010896 460 VTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494 (498)
Q Consensus 460 ~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~ 494 (498)
+.+.++..+||.|-+..+++|+
T Consensus 323 -------------~Gd~vll~~~G~G~t~~~~~l~ 344 (345)
T 3s21_A 323 -------------KGDRIALLGIGSGLNCSMAEVV 344 (345)
T ss_dssp -------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred -------------CCCEEEEEEEChhhhheEEEEE
Confidence 1246778899999988888875
|
| >1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.9e-18 Score=177.05 Aligned_cols=244 Identities=13% Similarity=0.090 Sum_probs=164.9
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|++.|+++||++ + ++++++ .+++|+..+. ......+.+|+..
T Consensus 51 ~~~la~~Aa~~aL~~--~---~~~~Id----~li~~t~~~~--------------------------~~~p~~a~~v~~~ 95 (396)
T 1xpm_A 51 IVSMGANAAKDIITD--E---DKKKIG----MVIVATESAV--------------------------DAAKAAAVQIHNL 95 (396)
T ss_dssp HHHHHHHHHHTTCCH--H---HHHHEE----EEEEECSSCS--------------------------BSSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc--C---CHHHCC----EEEEEeCCCC--------------------------CCCCCHHHHHHHH
Confidence 568999999999987 4 233332 3556764221 1112467889999
Q ss_pred hcCCC--CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCC
Q 010896 236 TGLMG--PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRD 313 (498)
Q Consensus 236 lgl~G--p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~ 313 (498)
||+++ |++.+.++|+|++.||..|.++|++|.++.+||+|+|. ... .++ .++
T Consensus 96 lGl~~~~~~~~v~~aC~sg~~Al~~A~~~I~sg~~~~vLvvg~e~--s~~-----------------------~~~-~~~ 149 (396)
T 1xpm_A 96 LGIQPFARCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDT--ARY-----------------------GLN-SGG 149 (396)
T ss_dssp TTCCSSCEEEEEESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEE--ECC-----------------------CTT-CSS
T ss_pred hCCCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCEEEEEeehh--hcc-----------------------ccC-CCC
Confidence 99974 89999999999999999999999999999999999995 111 011 146
Q ss_pred CccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEec-CCCCCCCCCC------ChHH--------HHHHHHHHHHHcCC
Q 010896 314 GFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTC-DAHHMTDPRS------DGLG--------VSSCIAKSLEDAGV 378 (498)
Q Consensus 314 G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~-dg~~~~~p~~------~~~~--------~~~~i~~Al~~Agl 378 (498)
++++||||+|+||++. ..+++...+.+... |..+...|.+ ++.. +.++++++|+++|+
T Consensus 150 ~~~~GdGA~A~vl~~~-------~~i~~~~~~~g~~~~d~~~~~~p~~~~~~~~~G~~~~~~~~~~~~~~~~~~L~~agl 222 (396)
T 1xpm_A 150 EPTQGAGAVAMVIAHN-------PSILALNEDAVAYTEDVYDFWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQGK 222 (396)
T ss_dssp GGGCEEEEEEEEEEES-------CSSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CcccccceEEEEeccC-------CceEEEEeccccccceEEEeeccCCCCCeEEEcHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 8999999999999863 24666555544333 4433333332 5554 67899999999999
Q ss_pred CCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcc-----cccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCC
Q 010896 379 SPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEM-----KMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLN 452 (498)
Q Consensus 379 ~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~-----~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~ 452 (498)
+++||||+.+|+++++.+|......+....+- ...+ +-......+||+.+|+-.+.|..++. ++.+.
T Consensus 223 ~~~did~~~~H~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~s~~~~~~~GN~~saSi~l~L~~~l~---~~~l~---- 295 (396)
T 1xpm_A 223 SLADFASLCFHVPFTKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLLE---NRDLQ---- 295 (396)
T ss_dssp CGGGCSEEEECCSSHHHHHHHHHTTGGGSCHHHHHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHHH---HSCCC----
T ss_pred CHHHCCEEEecCCchHHHHHHHHHHHhhcccCCHHHHHHHhhhhhhhhhhcCchHHHHHHHHHHHHHH---cCCCC----
Confidence 99999999999999998887653322110000 0000 11122467999999997777776543 33321
Q ss_pred CCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEe
Q 010896 453 QDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494 (498)
Q Consensus 453 ~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~ 494 (498)
+.+++++.+||.|-+...++++
T Consensus 296 --------------------~Gd~ill~s~GsG~~~~~~~~~ 317 (396)
T 1xpm_A 296 --------------------AGETIGLFSYGSGSVGEFYSAT 317 (396)
T ss_dssp --------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred --------------------CCCEEEEEEECcchhheEEEEE
Confidence 1256777899976554444443
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-16 Score=163.53 Aligned_cols=246 Identities=17% Similarity=0.186 Sum_probs=161.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHH
Q 010896 155 DCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAI 234 (498)
Q Consensus 155 ~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~ 234 (498)
....|+.+|+++||+++|+++ +++| .|++++.... ...+..+.+|+.
T Consensus 116 ~~~~La~~Aa~~AL~~agi~~---~dId----~vi~~t~t~~--------------------------~~~p~~a~~v~~ 162 (392)
T 3led_A 116 ILAEMAVTAAEQAIERWGKPR---ERIG----AVLCACSNMQ--------------------------RAYPAMAIEVQN 162 (392)
T ss_dssp HHHHHHHHHHHHHHHHHCSCG---GGEE----EEEEESSCCS--------------------------CSBSCHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHcCCCH---HHCC----EEEEEecCCC--------------------------CCccHHHHHHHH
Confidence 356899999999999999944 4444 5777764221 112246788999
Q ss_pred hhcCCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCC
Q 010896 235 DTGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDG 314 (498)
Q Consensus 235 ~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G 314 (498)
.||++.|.+.|+.+|++++.||..|.++|++|.++.+||+|+|.+ +.. + .+.|. ...
T Consensus 163 ~LGl~~~~~dv~~aC~g~~~aL~~A~~~i~~g~~~~vLvvg~E~~-S~~----------~-----------d~~dr-~t~ 219 (392)
T 3led_A 163 ALGLGGFAFDMNVACSSATFGLKTAADFVGGGSVDAVLMVNPEIC-SGH----------L-----------NFRDR-DSH 219 (392)
T ss_dssp HTTCCSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEG-GGG----------C-----------CTTCT-TTT
T ss_pred HhCCCCeEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEeehhc-CCc----------C-----------CcCcc-cCC
Confidence 999988999999999999999999999999999999999999962 111 0 11121 346
Q ss_pred ccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCC----------CC----------CCChH--------HHH
Q 010896 315 FVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMT----------DP----------RSDGL--------GVS 366 (498)
Q Consensus 315 ~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~----------~p----------~~~~~--------~~~ 366 (498)
+++||||+|+||++.+.. ..+ ..|.++...+++.... .+ ..++. .+.
T Consensus 220 ~lFGDGA~A~vl~~~~~~-~~~----~~i~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~ 294 (392)
T 3led_A 220 FIFGDVATAAIVERADDA-QGG----WSILGTKLKTQFSNNIRNNAGFLNRAWPEGRDKADKLFVQQGRKVFKEVVPLVS 294 (392)
T ss_dssp TTBCEEEEEEEEEEGGGC-CSS----EEEEEEEEEECCCSSEEBCCSGGGGGSGGGTTSGGGSCEECHHHHHHHHHHHHH
T ss_pred cccccccEEEEEEecCCC-CCC----CeEEEEEEEEccccccccCCCcccCCCccccccccceEEechHHHHHHHHHHHH
Confidence 899999999999875421 011 2344444433332100 00 01222 345
Q ss_pred HHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHH-hc-CCCcccccccccccCCcchhhhHHHHHHHHHHhhc
Q 010896 367 SCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKV-FK-DTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITT 444 (498)
Q Consensus 367 ~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~-f~-~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~ 444 (498)
++++++|+++|++++|||++..|-.+....| ++.+. ++ +...-.+...-..+||+.+|+=.+.|-. + .
T Consensus 295 ~~i~~~L~~~gl~~~dId~~v~Hqan~~i~~-----~~~~~llgl~~~~~k~~~~l~~~GNtssAsipl~L~~----~-~ 364 (392)
T 3led_A 295 EMIIEHAREIGIDPHGLKRMWLHQANINMNE-----IIGRKVLGRDPTRDENVIILDDYANTSSAGSIIAFHK----H-Q 364 (392)
T ss_dssp HHHHHHHHHTTCCGGGCSEEEECSSCHHHHH-----HHHHHHHTSCCCTTTBCCCHHHHCBCGGGHHHHHHHH----C-C
T ss_pred HHHHHHHHHcCCCHHHCcEEEEcCCCHHHHH-----HHHHHhcCCCCCHHHHHHHHhhhCccHHHHHHHHHHH----H-h
Confidence 6799999999999999999999966544322 33333 34 1111112233456799988774444432 1 1
Q ss_pred CccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 445 GWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 445 g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
+.+ .+...++..+||.|-+-.+++|+.
T Consensus 365 ~~~------------------------~~Gd~vll~gfG~G~t~~~~ll~~ 391 (392)
T 3led_A 365 DDM------------------------AQGDLGLICSFGAGYSAGTVFVQK 391 (392)
T ss_dssp TTC------------------------CTTCEEEEEEEETTTEEEEEEEEE
T ss_pred CCC------------------------CCCCEEEEEEEChhhEeEEEEEEE
Confidence 111 122567888999999999999874
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A | Back alignment and structure |
|---|
Probab=99.73 E-value=7.4e-18 Score=172.39 Aligned_cols=267 Identities=13% Similarity=0.092 Sum_probs=175.3
Q ss_pred CCccccccCCHHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchh
Q 010896 145 IDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSI 224 (498)
Q Consensus 145 i~~~~~~~~d~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (498)
+..+....+.....|+.+|+++||+++|++ +++++ .+++++..+ ..
T Consensus 87 ~~~r~~~~~~~~~~La~~Aa~~aL~~ag~~---~~~Id----~li~~t~~~---------------------------~~ 132 (387)
T 3a5r_A 87 LNVRHKMQVKGVAELGKEAALKAIKEWGQP---KSKIT----HLIVCCLAG---------------------------VD 132 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSC---GGGCC----EEEEEESSC---------------------------CE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCC---HHHCC----EEEEEecCC---------------------------CC
Confidence 344444455677899999999999999994 44555 577776421 01
Q ss_pred hhhhHHHHHHhhcCCCC---ccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCC
Q 010896 225 TNMGSALLAIDTGLMGP---NYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYP 301 (498)
Q Consensus 225 ~n~~a~~ia~~lgl~Gp---~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p 301 (498)
.+..+.+|+..||++++ .+.++.+|+|++.||..|.++|++|.++.+||+|+|.+. ..
T Consensus 133 ~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s-~~------------------ 193 (387)
T 3a5r_A 133 MPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTT-TC------------------ 193 (387)
T ss_dssp ESCHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECCT-TT------------------
T ss_pred CCcHHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHHHHhCCCCEEEEEEEeccc-hh------------------
Confidence 22467889999999885 788999999999999999999999999999999999631 10
Q ss_pred CCCCCcCCC----CCCCccccceeEEEEEcchHHHHhcC-CcEEEEEEeEEEec--CCCC--------------C--CCC
Q 010896 302 KRASRPWDK----DRDGFVMGEGCGILVMESLEHAMKRG-ANIIAEYLGGAVTC--DAHH--------------M--TDP 358 (498)
Q Consensus 302 ~~~~rpfd~----~~~G~v~gEGaaavvLe~~~~A~~~g-~~i~a~I~g~~~~~--dg~~--------------~--~~p 358 (498)
...|+|. ...++++||||+|+||++.+.. + .....++.+.+... +... + ..+
T Consensus 194 --~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~ 268 (387)
T 3a5r_A 194 --FRGPSETHLDSMIGQAILGDGAAAVIVGADPDL---TVERPIFELVSTAQTIVPESHGAIEGHLLESGLSFHLYKTVP 268 (387)
T ss_dssp --CCCCCSSCCSSTTHHHHBCCEEEEEEEESSCCT---TTCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHH
T ss_pred --hcCCCccchhhccccceeccceeEEEEecCCCc---cccCCceEEEeeeEEEeCCChHhcCceEcCCCeEEEecchHH
Confidence 0123332 2357899999999999875421 1 11113444433221 1100 0 000
Q ss_pred CCChHHHHHHHHHHHHHcCCC-CCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCccccc-ccccccCCcchhhhHHHH
Q 010896 359 RSDGLGVSSCIAKSLEDAGVS-PEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMN-GTKSMIGHGLGAAGGLEA 435 (498)
Q Consensus 359 ~~~~~~~~~~i~~Al~~Agl~-~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~-s~K~~~Gh~~~AaG~~~l 435 (498)
......+.++++++|+++|++ .+|| ++..|..+....|. +.+.++- ..++..+ .+...+||+.+|+-.+.|
T Consensus 269 ~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i~~~-----~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L 342 (387)
T 3a5r_A 269 TLISNNIKTCLSDAFTPLNISDWNSL-FWIAHPGGPAILDQ-----VTAKVGLEKEKLKVTRQVLKDYGNMSSATVFFIM 342 (387)
T ss_dssp HHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSCHHHHHH-----HHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCChhhe-eEEECCCCHHHHHH-----HHHHcCCChHHhHHHHHHHHhcCCcchhHHHHHH
Confidence 001234567899999999998 8899 89999877655443 3444542 1233332 356779999999988877
Q ss_pred HHHHHHh-hcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEeeC
Q 010896 436 ITTIKAI-TTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 436 i~a~~~L-~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
..++..= +.|.+.| -.+...+++.+||.|-+..+++|+-.
T Consensus 343 ~~~~~~g~~~G~~~~---------------------G~~~d~vll~~fG~G~t~~~~ll~~~ 383 (387)
T 3a5r_A 343 DEMRKKSLENGQATT---------------------GEGLEWGVLFGFGPGITVETVVLRSV 383 (387)
T ss_dssp HHHHHHHHHTTCSBT---------------------TTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred HHHHHhccccCCCCC---------------------CCCcceEEEEEecCcceeeehhheec
Confidence 7765432 1111100 00125678889999988888888743
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=99.73 E-value=6.5e-16 Score=153.92 Aligned_cols=240 Identities=15% Similarity=0.232 Sum_probs=163.0
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+.+|+++||+++|++ ++++| .|++++..+. ......+.+++..
T Consensus 58 ~~~La~~Aa~~aL~~ag~~---~~~Id----~vi~~t~~~~--------------------------~~~p~~a~~v~~~ 104 (323)
T 3il3_A 58 VATMGFEAAKNAIEAAQIN---PQDIE----LIIVATTSHS--------------------------HAYPSAACQVQGL 104 (323)
T ss_dssp HHHHHHHHHHHHHHHHCCC---GGGCC----EEEEECSCCS--------------------------CSSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCC---HHHCC----EEEEEeCCCC--------------------------CCCccHHHHHHHH
Confidence 4689999999999999994 45555 6788864221 1112357889999
Q ss_pred hcCC-CCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCC
Q 010896 236 TGLM-GPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDG 314 (498)
Q Consensus 236 lgl~-Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G 314 (498)
+|++ .|.+.++.+|+|++.||..|+++|++|+++.+||+|+|.+... + ++ ......
T Consensus 105 lGl~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~-----------~-----------~~-~d~~~~ 161 (323)
T 3il3_A 105 LNIDDAISFDLAAACTGFVYALSVADQFIRAGKVKKALVIGSDLNSRK-----------L-----------DE-TDRSTV 161 (323)
T ss_dssp TTCSSCEEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGS-----------C-----------CT-TCTTTT
T ss_pred hCCCCccEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEEeeccccc-----------c-----------Cc-cccccc
Confidence 9996 4889999999999999999999999999999999999973211 0 11 111346
Q ss_pred ccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCC---CCCC------------CCChH--------HHHHHHHH
Q 010896 315 FVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHH---MTDP------------RSDGL--------GVSSCIAK 371 (498)
Q Consensus 315 ~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~---~~~p------------~~~~~--------~~~~~i~~ 371 (498)
+++||||+|+||++.+ +..+ .++...+++.. ...| ..++. .+.+++++
T Consensus 162 ~lfGDGA~A~vl~~~~-----~~~i----~~~~~~s~g~~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~ 232 (323)
T 3il3_A 162 VLFGDGAGAVILEASE-----QEGI----ISTHLHASADKNNALVLAQPERGIEKSGYIEMQGNETFKLAVRELSNVVEE 232 (323)
T ss_dssp TTBCEEEEEEEEEEES-----SCCE----EEEEEEECCCCSCSEECCCCCTTCSSCSCCEECHHHHHHHHHHHHHHHHHH
T ss_pred cccccceEEEEEEEcC-----CCCe----EEEEEEEcCCCcceEEECCCCCCCCCCCcEEEcCHHHHHHHHHHHHHHHHH
Confidence 8899999999998743 2223 33333333321 0011 01222 34567899
Q ss_pred HHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCC
Q 010896 372 SLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPT 450 (498)
Q Consensus 372 Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~ 450 (498)
+|+++|++++|||++..|-.+... .+.+.+.++- ..++.. .-..+||+.+|+=.+.|..+ ++.|.+.
T Consensus 233 ~l~~~gl~~~did~~v~Hq~~~~i-----~~~~~~~lgl~~ek~~~--~l~~~GNt~sasi~~~L~~~---~~~g~~~-- 300 (323)
T 3il3_A 233 TLLANNLDKKDLDWLVPHQANLRI-----ITATAKKLEMDMSQVVV--TLDKYANNSAATVPVALDEA---IRDGRIQ-- 300 (323)
T ss_dssp HHHTTTCCTTTCCEEEECCSCHHH-----HHHHHHHTTCCGGGBCC--CHHHHCBCGGGHHHHHHHHH---HHTTSSC--
T ss_pred HHHHcCCCHHHCCEEEEcCCCHHH-----HHHHHHHcCcCHHHhhc--cHhhcCchHHHHHHHHHHHH---HHcCCCC--
Confidence 999999999999999999766443 2345555542 122222 23467999998866666554 3443321
Q ss_pred CCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEe
Q 010896 451 LNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494 (498)
Q Consensus 451 ~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~ 494 (498)
+.+.++..+||.|-+-.++|++
T Consensus 301 ----------------------~Gd~vll~~~G~G~t~~~~~l~ 322 (323)
T 3il3_A 301 ----------------------RGQLLLLEAFGGGWTWGSALVR 322 (323)
T ss_dssp ----------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred ----------------------CCCEEEEEEEehhheeEEEEEE
Confidence 2246777899999999988886
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=99.72 E-value=5.8e-16 Score=156.89 Aligned_cols=293 Identities=13% Similarity=0.135 Sum_probs=183.2
Q ss_pred CCcEEEEeeceecCCC-CCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHH
Q 010896 85 KKRIVITGMGLVSVFG-SDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVA 163 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g-~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~a 163 (498)
.++|.|+|+|...|.- .+.+++.+.+. +.+ +.|-.. + .| .....+..+. .....|+.+|
T Consensus 28 ~~~v~I~gig~~lP~~~v~n~~l~~~~~-~~~-----~~~i~~----~-tG----I~~R~~a~~~-----~~~~~La~~A 87 (365)
T 3gwa_A 28 PPRAAIADIAGHLPEQVLTNDVLAQLYP-DWP-----AEKILA----K-TG----IRERRIAAPR-----ETAADLAYEA 87 (365)
T ss_dssp -CEEEEEEEEEECCSEEEEHHHHHHHCT-TCC-----HHHHHH----H-HC----CCEEEECCTT-----CCHHHHHHHH
T ss_pred eccEEEEEEEEeCCCcEEcHHHHHHHcc-CCC-----HHHHHH----h-cC----ccEEEECCCC-----CCHHHHHHHH
Confidence 4579999999999986 56667666441 110 000000 0 00 0000001111 1246899999
Q ss_pred HHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCC--CC
Q 010896 164 GRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLM--GP 241 (498)
Q Consensus 164 a~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~--Gp 241 (498)
+++||+++|++ +++++ .|++++..+. ......+.+++..+|++ .|
T Consensus 88 a~~aL~~ag~~---~~~Id----~vi~~t~~~~--------------------------~~~p~~a~~v~~~lGl~~~~~ 134 (365)
T 3gwa_A 88 ARKLFAQGAVG---ADQVD----FVILCTQAPD--------------------------YVLPTSACMLQHRLGIPTHAG 134 (365)
T ss_dssp HHHHHHTTSCC---GGGCC----EEEEEESSCS--------------------------CSBSCHHHHHHHHTTCCTTSE
T ss_pred HHHHHHHcCCC---HHHCC----EEEEEeCCCC--------------------------CCCCcHHHHHHHHcCCCCCce
Confidence 99999999994 45555 5788764211 11223577899999997 58
Q ss_pred ccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCcccccee
Q 010896 242 NYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGC 321 (498)
Q Consensus 242 ~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGa 321 (498)
.+.|+.+|+|++.||..|.++|++|.++.+||+|+|.+.... .+.| ....+++||||
T Consensus 135 ~~~v~~~C~s~~~Al~~A~~~i~~g~~~~vLvvg~e~~s~~~----------------------~~~d-r~~~~lfGDGA 191 (365)
T 3gwa_A 135 ALDVNLGCSGYVYGLSLAKGLVETGAARCVLLLTADTYSKYL----------------------HPLD-KSVRTLFGDGA 191 (365)
T ss_dssp EEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGS----------------------CTTC-HHHHTTBCCEE
T ss_pred EEEecccChHHHHHHHHHHHHHHcCCCCEEEEEEEchhhccC----------------------Cccc-cccccccccee
Confidence 999999999999999999999999999999999999732211 0101 11246899999
Q ss_pred EEEEEcchHHHHhcCCcEEEEEEeEEEecCCC----------CCCCCC----------------------CCh-------
Q 010896 322 GILVMESLEHAMKRGANIIAEYLGGAVTCDAH----------HMTDPR----------------------SDG------- 362 (498)
Q Consensus 322 aavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~----------~~~~p~----------------------~~~------- 362 (498)
+|+||++.+. ....+... ...+|+. ....|. -++
T Consensus 192 aA~vl~~~~~---~~~~i~~~----~~~s~g~~~~~~~~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~ 264 (365)
T 3gwa_A 192 SATAVIAEHG---ELERIGPF----VFGTDGRGAPNLIVKAGLFREPKSADSAREHEDASGNVRTDEHLYMNGAEVMAFS 264 (365)
T ss_dssp EEEEEEEECS---SSCSEEEE----EEEECGGGGGGEEECSSSSSSCCCTGGGCCEECTTSCEECTTSEEECHHHHHHHH
T ss_pred EEEEEEecCC---CCCceEEE----EEEEcCCCCCeEEecCCCcCCCCcccccccccccccccccccceEeccHHHHHHH
Confidence 9999987432 11113222 2212211 000010 012
Q ss_pred -HHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHH
Q 010896 363 -LGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIK 440 (498)
Q Consensus 363 -~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~ 440 (498)
..+.++++++|+++|++++|||++..|-.+... .+.+.+.++- ..++. ..-..+||+.+|+=.+.|..+
T Consensus 265 ~~~~~~~i~~~L~~~gl~~~did~~v~Hq~n~~i-----~~~~~~~Lgl~~ek~~--~~l~~~GNtssAsipl~L~~~-- 335 (365)
T 3gwa_A 265 LAEVPRAADRLLALAGEPRENIDCFVLHQANRFM-----LDALRKKMKIPEHKFP--VLMEHCGNTVSSTLPLALETM-- 335 (365)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHH-----HHHHHHHHTCCGGGSC--CCCTTTCBCGGGHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH-----HHHHHHHhCCCHHHHH--HHHhcccchHHHHHHHHHHHH--
Confidence 234578999999999999999999999665544 3344555542 12222 234578999988866555443
Q ss_pred HhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEe
Q 010896 441 AITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494 (498)
Q Consensus 441 ~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~ 494 (498)
++.|.+. +.+.++..+||.|-+..++||+
T Consensus 336 -~~~g~~~------------------------~Gd~vll~~fG~G~t~~~~ll~ 364 (365)
T 3gwa_A 336 -RANGTLA------------------------RGMRLMLLGFGVGYSWAGCLVN 364 (365)
T ss_dssp -HHTTCCC------------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred -HHcCCCC------------------------CCCEEEEEEEehhheeEEEEEE
Confidence 3444321 2256778899999999888885
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A | Back alignment and structure |
|---|
Probab=99.70 E-value=4.8e-17 Score=167.55 Aligned_cols=265 Identities=14% Similarity=0.088 Sum_probs=175.1
Q ss_pred ccCCHHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHH
Q 010896 151 RRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSA 230 (498)
Q Consensus 151 ~~~d~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~ 230 (498)
..++....|+.+|+++||+++|++ +++++ .++++++.+ + .....+.
T Consensus 120 ~~~~~~~~La~~Aa~~AL~~agl~---~~~Id----~li~~t~~~----------------------~-----~~p~~a~ 165 (413)
T 1xes_A 120 MLAMEVPRLAKEAAEKAIQEWGQS---KSGIT----HLIFCSTTT----------------------P-----DLPGADF 165 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSC---GGGCC----EEEEEESCC----------------------C-----EESCHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHcCCC---HHHCC----EEEEEEeCC----------------------C-----ccchHHH
Confidence 334577899999999999999994 44555 577776421 0 1223577
Q ss_pred HHHHhhcCCCC---ccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCc
Q 010896 231 LLAIDTGLMGP---NYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRP 307 (498)
Q Consensus 231 ~ia~~lgl~Gp---~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rp 307 (498)
+|+..||++++ .+.+..+|+|++.||..|.++|++|.++.+||+|+|.+.... . .|.. ++
T Consensus 166 ~v~~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~~G~~~~vLvvg~E~~s~~~-----------~----~~~d--~~ 228 (413)
T 1xes_A 166 EVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTF-----------R----GPSE--TH 228 (413)
T ss_dssp HHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCCEEEEEEECTTTTC-----------C----CCCT--TC
T ss_pred HHHHHcCcCCccchhceecCccHHHHHHHHHHHHHHHcCCCCEEEEEEehhhhhhh-----------c----CCCc--cc
Confidence 89999999885 788999999999999999999999999999999999632100 0 0111 34
Q ss_pred CCCCCCCccccceeEEEEEcchHHHHhcCC-cEEEEEEeEEEec--CCCC--------------C--CCCCCChHHHHHH
Q 010896 308 WDKDRDGFVMGEGCGILVMESLEHAMKRGA-NIIAEYLGGAVTC--DAHH--------------M--TDPRSDGLGVSSC 368 (498)
Q Consensus 308 fd~~~~G~v~gEGaaavvLe~~~~A~~~g~-~i~a~I~g~~~~~--dg~~--------------~--~~p~~~~~~~~~~ 368 (498)
|+....++++||||+|+||++.+. .+. ....++.+.+... +... + ..+......+.++
T Consensus 229 ~~~~~~~~lfGDGA~A~vl~~~~~---~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~ 305 (413)
T 1xes_A 229 LDSLVGQALFGDGASALIVGADPI---PQVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENC 305 (413)
T ss_dssp HHHHHHHHHBCCEEEEEEEESSCC---TTTSCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHH
T ss_pred hhhcccceeEecccEEEEEecCCC---ccccCCceEEEeeeeEEcCCChhhcCcEEecCceEEEecccHHHHHHHHHHHH
Confidence 544567899999999999987542 121 1113444443221 1100 0 0000112456678
Q ss_pred HHHHHHHcCCC-CCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCccccc-ccccccCCcchhhhHHHHHHHHHHh-hc
Q 010896 369 IAKSLEDAGVS-PEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMN-GTKSMIGHGLGAAGGLEAITTIKAI-TT 444 (498)
Q Consensus 369 i~~Al~~Agl~-~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~-s~K~~~Gh~~~AaG~~~li~a~~~L-~~ 444 (498)
++++|+++|++ .+|| ++..|..+....|. +.+.++- ..++..+ .+...+||+.+|+-.+.|..++..= +.
T Consensus 306 i~~~L~~~gl~d~~di-~~v~Hq~~~~i~~~-----~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~ 379 (413)
T 1xes_A 306 MVEAFSQFKISDWNKL-FWVVHPGGRAILDR-----VEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQN 379 (413)
T ss_dssp HHHHHGGGTCCCGGGS-EEEECCSCHHHHHH-----HHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCCccce-eEEECCCCHHHHHH-----HHHHcCCChHHhHHHHHHHHhcCcCchhhHHHHHHHHHHhcccc
Confidence 99999999998 8888 89999776554443 4455553 2233332 3456799999999888777765432 12
Q ss_pred CccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEeeC
Q 010896 445 GWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 445 g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
|.+.| -.+...+++.+||.|-+..+++|+-.
T Consensus 380 G~~~~---------------------G~~~d~vll~~fG~G~t~~~~ll~~~ 410 (413)
T 1xes_A 380 GCSTT---------------------GEGLEMGVLFGFGPGLTIETVVLKSV 410 (413)
T ss_dssp TCSBT---------------------TTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred CCCCC---------------------CCCcceEEEEEecCCcEEeEEEEEec
Confidence 11100 00125678889999998888888754
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=99.68 E-value=7.5e-15 Score=148.22 Aligned_cols=245 Identities=16% Similarity=0.128 Sum_probs=162.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHH
Q 010896 155 DCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAI 234 (498)
Q Consensus 155 ~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~ 234 (498)
....|+.+|+++||+++|+++ +++| .|++++.... .+ ... .++.+++.
T Consensus 53 ~~~~La~~Aa~~aL~~ag~~~---~dId----~vi~~t~~~~-------------------~~----d~~--~~a~~v~~ 100 (357)
T 3s3l_A 53 APPRMAARAARAALGRGDVDP---ADVS----LVLHSSLWFQ-------------------GI----DLW--PAASYVAH 100 (357)
T ss_dssp SHHHHHHHHHHHHHHHTTCCG---GGEE----EEEEECSSCC-------------------SS----SSS--CHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCH---HHCC----EEEEEeccCC-------------------Cc----ccc--cHHHHHHH
Confidence 356899999999999999944 4444 4677764200 01 111 24778889
Q ss_pred hhcCCC-CccccccccchHHHHHHHHHHHHHcCCCc--EEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCC
Q 010896 235 DTGLMG-PNYSISTACATANYCFYAAANHIRRGETD--IMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKD 311 (498)
Q Consensus 235 ~lgl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d--~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~ 311 (498)
.+|++. |.+.|+.+|+|++.||..|..+|++|.++ .+||+|+|.+..+. ..+|+.
T Consensus 101 ~lG~~~~~~~~v~~aC~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s~~~---------------------~~~~~~- 158 (357)
T 3s3l_A 101 EAVGRHVPAFGLAQRCNGGMGAIELAGAYLGSGIGAGHAALLTTGDRFAGPR---------------------IDRWNS- 158 (357)
T ss_dssp HHTCSSSCEEEEECGGGHHHHHHHHHHHHHHTTSSSSSEEEEEEEECCCTTT---------------------CCTTTS-
T ss_pred HhCCCCCcEEEEcCccHHHHHHHHHHHHHHHcCCCCCCEEEEEEEecccccc---------------------cccccc-
Confidence 999975 88899999999999999999999999999 99999999732110 011222
Q ss_pred CCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCC--C------CCCC-------C--Ch------------
Q 010896 312 RDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHH--M------TDPR-------S--DG------------ 362 (498)
Q Consensus 312 ~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~--~------~~p~-------~--~~------------ 362 (498)
+..+++||||+|+||++.+ +. ..|.++...+++.. + ..|. . ++
T Consensus 159 ~~~~lfGDGA~A~vl~~~~-----~~---~~i~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~ 230 (357)
T 3s3l_A 159 VDVTMYGDGAAALVLSTRD-----GF---ARVLSTATGVDNSLEILARGDEPFAPHPVEPSPVADLGTRTVRGAELADLP 230 (357)
T ss_dssp SSSCCBCCEEEEEEEESSC-----CS---EEEEEEEEEECGGGGGGGTTTCCCCSSCCSSCCCCCHHHHHHHHHHHHCCT
T ss_pred cCCcccccccEEEEEecCC-----CC---CeEEEEEEEEccChhhhcccCCCCCCCccCcCCccccccchhhhhcccchh
Confidence 3578999999999998642 11 23555555444431 0 0010 0 11
Q ss_pred -------HHHHHHHHHHHHHcCCCCCCcCEEEc-cCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHH
Q 010896 363 -------LGVSSCIAKSLEDAGVSPEEVNYVNA-HATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGL 433 (498)
Q Consensus 363 -------~~~~~~i~~Al~~Agl~~~dId~i~~-hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~ 433 (498)
..+.++++++|+++|++++|||++.+ |-.... .+. +.+.++- ..++.. ..-..+||+.+|+=.+
T Consensus 231 ~~~~~~~~~~~~~i~~~L~~~gl~~~did~~v~~hq~~~~-~~~-----~~~~lgl~~ek~~~-~~~~~~GNt~aAsipl 303 (357)
T 3s3l_A 231 DLTHRYIDLLVAAKTQALEDAGTAIEDIAHAVIPVSRRGT-GHE-----LHDLLGLPDERTSW-AYGRTTGHVGAGDQYA 303 (357)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTCCGGGCSEEECCSCCCCS-SCC-----HHHHHTSCGGGBTH-HHHHHHCBCTTCHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH-HHH-----HHHHcCCCHHHhHH-HhccccccchHhHHHH
Confidence 13556899999999999999999996 876655 443 3444442 122222 2223479999888666
Q ss_pred HHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 434 EAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 434 ~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
.|..++ +.|.+. +-+.++..+||.|-+..+++|+-
T Consensus 304 ~L~~~~---~~g~l~------------------------~Gd~vll~~fG~G~t~~a~ll~~ 338 (357)
T 3s3l_A 304 GLAHLV---ENALVQ------------------------PGDRVLLFGGGAGYTCTAAVVEI 338 (357)
T ss_dssp HHHHHH---HTTCCC------------------------TTCEEEEECCBTTTEEEEEEEEE
T ss_pred HHHHHH---HcCCCC------------------------CCCEEEEEEEchhhhheeeeEEe
Confidence 665543 333321 22567888999998888888874
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=4.1e-15 Score=148.11 Aligned_cols=290 Identities=15% Similarity=0.182 Sum_probs=177.3
Q ss_pred CCcEEEEeeceecCCC-CCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHH
Q 010896 85 KKRIVITGMGLVSVFG-SDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVA 163 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g-~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~a 163 (498)
.++|.|+|+|...|.- .+.+++.+.+ +.+ +.|-.. +. +.....+..+. ....|+.+|
T Consensus 2 ~~~~~I~~~g~~lP~~~v~n~~~~~~~--~~~-----~~~i~~----~~-----Gi~~R~~a~~~------e~~~La~~A 59 (321)
T 3il6_A 2 KNYARISCTSRYVPENCVTNHQLSEMM--DTS-----AAWIHS----RT-----GISERRIVTQE------NTSDLCHQV 59 (321)
T ss_dssp CCEEEEEEEEEECCSCEEEHHHHHHHT--TSC-----HHHHHH----HH-----SCSEEECCSSC------CHHHHHHHH
T ss_pred CCcEEEEEEEEECCCcEEcHHHHHHHh--CCC-----hhhhhh----hc-----CceEEEECCCC------CHHHHHHHH
Confidence 4579999999999986 4666666543 111 000000 00 01111111111 156899999
Q ss_pred HHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCC-CCc
Q 010896 164 GRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLM-GPN 242 (498)
Q Consensus 164 a~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~-Gp~ 242 (498)
+++||+++|++ +++++ .+++++.... ......+.+++..||++ .|.
T Consensus 60 a~~aL~~ag~~---~~~Id----~li~~t~~~~--------------------------~~~p~~a~~v~~~lGl~~~~~ 106 (321)
T 3il6_A 60 AKQLLEKSGKQ---ASEID----FILVATVTPD--------------------------FNMPSVACQVQGAIGATEAFA 106 (321)
T ss_dssp HHHHHHHHTCC---GGGCC----EEEEECSSCS--------------------------CSSSCHHHHHHHHTTCTTCEE
T ss_pred HHHHHHHcCCC---HHHCC----EEEEEeCCCC--------------------------cCCCcHHHHHHHHcCCCCceE
Confidence 99999999994 44555 6888874221 11224678899999997 488
Q ss_pred cccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeE
Q 010896 243 YSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCG 322 (498)
Q Consensus 243 ~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaa 322 (498)
+.|+.+|+|++.||..|+++|++|.++.+||+|+|.+ +.. + . ++.....+++||||+
T Consensus 107 ~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~-s~~----------~-----------~-~~dr~~~~lfGDGA~ 163 (321)
T 3il6_A 107 FDISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETF-SKM----------L-----------D-WTDRSTAVLFGDGAA 163 (321)
T ss_dssp EEECCGGGHHHHHHHHHHHHHHTSSCCCEEEEEEECG-GGG----------S-----------C-TTCTTTGGGBCCEEE
T ss_pred EEeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEEccc-ccc----------C-----------C-ccccccceeeccccE
Confidence 9999999999999999999999999999999999973 111 0 1 111134578999999
Q ss_pred EEEEcchHHHHhcCCcEEEEEEeEEEecCCC------------CCCC----------CCCChHHH----HHHHHHHHHHc
Q 010896 323 ILVMESLEHAMKRGANIIAEYLGGAVTCDAH------------HMTD----------PRSDGLGV----SSCIAKSLEDA 376 (498)
Q Consensus 323 avvLe~~~~A~~~g~~i~a~I~g~~~~~dg~------------~~~~----------p~~~~~~~----~~~i~~Al~~A 376 (498)
|+||++.+. ..++. +...+|+. .... ...++..+ .+.+.++++++
T Consensus 164 A~vl~~~~~-----~~i~~----~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~ 234 (321)
T 3il6_A 164 GVLIEAAET-----PHFLN----EKLQADGQRWTALTSGYTINESPFYQGHKQASKTLQMEGRSIFDFAIKDVSQNILSL 234 (321)
T ss_dssp EEEEEEESS-----CCEEE----EEEEECGGGGGGEECCCCCCCSTTCCCCCCCCCSCEECHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEEEcCC-----CCEEE----EEEEEcCCCCCeEEeCCCCCCCCCCccccccccceeechHHHHHHHHHHHHHHHHHH
Confidence 999997442 12332 22222221 0000 00123221 12333333333
Q ss_pred CCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCC
Q 010896 377 GVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDN 455 (498)
Q Consensus 377 gl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~ 455 (498)
+.++|||++-.|-.+... .+.+.+.++- ..++. ..-..+||+.+|+=.+.|..+ ++.|.+.|
T Consensus 235 -l~~~did~~v~Hq~~~~i-----~~~~~~~lgl~~ek~~--~~l~~~GNt~sasi~~~L~~~---~~~g~~~~------ 297 (321)
T 3il6_A 235 -VTDETVDYLLLHQANVRI-----IDKIARKTKISREKFL--TNMDKYGNTSAASIPILLDEA---VENGTLIL------ 297 (321)
T ss_dssp -CCGGGCSEEEECCSCHHH-----HHHHHHHHTCCGGGBC--CCGGGTCBCGGGHHHHHHHHH---HHTTSSCT------
T ss_pred -cCcccCCEEEEcCCCHHH-----HHHHHHHcCcCHHHhh--hhHhhcccHHHHHHHHHHHHH---HHhCCCCC------
Confidence 338999999999665443 3345555542 12232 245778999998866655543 34443311
Q ss_pred CCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEe
Q 010896 456 LEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494 (498)
Q Consensus 456 ~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~ 494 (498)
...+.++..+||.|-+-.+++|+
T Consensus 298 ----------------G~~d~vll~~fG~G~t~~~~~l~ 320 (321)
T 3il6_A 298 ----------------GSQQRVVLTGFGGGLTWGSLLLT 320 (321)
T ss_dssp ----------------TSCCEEEEEEEETTTEEEEEEEE
T ss_pred ----------------CCCCEEEEEEEehhheeEEEEEE
Confidence 01156788899999999888885
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1e-15 Score=154.69 Aligned_cols=242 Identities=15% Similarity=0.165 Sum_probs=161.3
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+.+|+++||+++|++ ++++| .|++++..+. ......+.+++..
T Consensus 74 ~~~La~~Aa~~aL~~agl~---~~dId----~vi~~t~~~~--------------------------~~~p~~a~~v~~~ 120 (359)
T 3h78_A 74 VSALMVPAARQAIEAAGLL---PEDID----LLLVNTLSPD--------------------------HHDPSQACLIQPL 120 (359)
T ss_dssp THHHHHHHHHHHHHHTTCC---GGGCC----EEEEECSSCS--------------------------SSBSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCC---HHHCC----EEEEEeCCCC--------------------------CCCCcHHHHHHHH
Confidence 4589999999999999994 45565 6788864221 1112357889999
Q ss_pred hcCCC-CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCC-CCC
Q 010896 236 TGLMG-PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDK-DRD 313 (498)
Q Consensus 236 lgl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~-~~~ 313 (498)
+|++. |.+.|+.+|+|++.||..|+.+|++|.++.+||+|+|.+.... ++-|. ...
T Consensus 121 lGl~~~~~~~v~~aC~s~~~Al~~A~~~i~sG~~~~vLvvg~e~~S~~~----------------------~~~d~~~~t 178 (359)
T 3h78_A 121 LGLRHIPVLDIRAQASGLLYGLQMARGQILAGLARHVLVVCGEVLSKRM----------------------DCSDRGRNL 178 (359)
T ss_dssp HTCCSCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEECGGGC----------------------CCSTTTHHH
T ss_pred cCCCCCcEEEECCHhHHHHHHHHHHHHHHHCCCcCEEEEEEEchhcccC----------------------Ccccccccc
Confidence 99975 8889999999999999999999999999999999999732110 11110 113
Q ss_pred CccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCC-----------CCCC--------------CCChH-----
Q 010896 314 GFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHH-----------MTDP--------------RSDGL----- 363 (498)
Q Consensus 314 G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~-----------~~~p--------------~~~~~----- 363 (498)
.+++||||+|+||++.+. .+..++. +...+++.. ...+ ..++.
T Consensus 179 ~~lfGDGAaA~vl~~~~~---~~~~i~~----~~~~s~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~g~~v~~~ 251 (359)
T 3h78_A 179 SILLGDGAGAVVVSAGES---LEDGLLD----LRLGADGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEH 251 (359)
T ss_dssp HTTBCEEEEEEEEECCSC---SSSEEEE----EEEEECGGGGGGEEBCCSSTTSSSTTCHHHHHTTTTSCEECHHHHHHH
T ss_pred cceecceeEEEEEEecCC---CCCceEE----EEEEEccCccceEEeCCCCCccCCccccccccccCCceEeccHHHHHH
Confidence 467999999999987431 1233333 222222210 0001 00222
Q ss_pred ---HHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHH
Q 010896 364 ---GVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTI 439 (498)
Q Consensus 364 ---~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~ 439 (498)
.+.++++++|+++|++++|||++..|-.+... .+.+.+.++- ..++.. .-..+||+.+|+=.+.|..++
T Consensus 252 ~~~~~~~~i~~~L~~~gl~~~did~~v~Hq~n~~i-----~~~~~~~lgl~~ek~~~--~l~~~GNt~sAsi~l~L~~~~ 324 (359)
T 3h78_A 252 ASQTLVRIAGEMLAAHELTLDDIDHVICHQPNLRI-----LDAVQEQLGIPQHKFAV--TVDRLGNMASASTPVTLAMFW 324 (359)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH-----HHHHHHHHTCCGGGBCC--CHHHHCBCGGGHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH-----HHHHHHHhCcCHHHhhh--hhhcccchHHHHHHHHHHHHH
Confidence 34568999999999999999999999666544 3344555542 122322 234679999998666665543
Q ss_pred HHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 440 KAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 440 ~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
.. + .+.+.++..+||.|-+..+++|+-
T Consensus 325 ~~-----l------------------------~~Gd~vll~~fG~G~t~~~~ll~~ 351 (359)
T 3h78_A 325 PD-----I------------------------QPGQRVLVLTYGSGATWGAALYRK 351 (359)
T ss_dssp GG-----S------------------------CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred Hh-----C------------------------CCCCEEEEEEEchhhhheeeeEEe
Confidence 22 1 012456778999999988998873
|
| >2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=3.4e-15 Score=155.24 Aligned_cols=182 Identities=13% Similarity=0.089 Sum_probs=127.5
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|++.|+++||+++|+++ ++++ .|++|+..+. ......+.+|+..
T Consensus 52 ~~~La~~Aa~~aL~~agi~~---~~Id----~li~~t~t~~--------------------------~~~p~~a~~v~~~ 98 (450)
T 2f82_A 52 VISMSFNAVTSLLEKYKIDP---KQIG----RLEVGSETVI--------------------------DKSKSIKTFLMQL 98 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCCG---GGEE----EEEEECCCCS--------------------------CSSSCHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHcCcCH---HHCC----EEEEEecCCC--------------------------CCCCcHHHHHHHH
Confidence 45899999999999999943 3333 4556764211 1123567888888
Q ss_pred hcC---C-CCccccccccchHHHHHHHHHHHHHcCCC--cEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCC
Q 010896 236 TGL---M-GPNYSISTACATANYCFYAAANHIRRGET--DIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWD 309 (498)
Q Consensus 236 lgl---~-Gp~~tv~~acaS~l~Al~~A~~~I~~G~~--d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd 309 (498)
||+ + .+.+.+..+|+|++.||..|.++|++|.+ +.+||+|+|.+. |+
T Consensus 99 lgl~g~~~~~~~~v~~aC~gg~~AL~~A~~~I~sg~~~~~~vLVvg~e~~~---------------------------~~ 151 (450)
T 2f82_A 99 FEKCGNTDVEGVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAV---------------------------YA 151 (450)
T ss_dssp HHTTTCCCCBCCEECSGGGHHHHHHHHHHHHHHSTTCCSCEEEEEEEEEEC---------------------------CS
T ss_pred hCCcCCCCceEEEhhhhhHHHHHHHHHHHHHHHcCCCcCCeEEEEEeeecc---------------------------cc
Confidence 898 3 47889999999999999999999999998 999999999631 11
Q ss_pred CCCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCC-------CCCCChH--------HHHHHHHHHHH
Q 010896 310 KDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMT-------DPRSDGL--------GVSSCIAKSLE 374 (498)
Q Consensus 310 ~~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~-------~p~~~~~--------~~~~~i~~Al~ 374 (498)
......++||||+|+||++.+. . .+.....|.... +..+.. .|..++. .+..+++++|+
T Consensus 152 ~~~~~~~fGDGA~A~ll~~~~~----~-~~~~~~~g~~~~-~~~d~~~p~~~~~~~~~~G~~~~~~~~~~l~~~~~~~l~ 225 (450)
T 2f82_A 152 EGPARPTGGAAAIAMLIGPDAP----I-VFESKLRGSHMA-HVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCN 225 (450)
T ss_dssp SSTTGGGCEEEEEEEEEESSCS----E-EEEEEEEEEEEC-CCCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcccccceEEEEeccCCc----e-EEEeccceeehh-hccceeeeCCCCCceeecCccHHHHHHHHHHHHHHHHHH
Confidence 1135678999999999986431 1 122222333322 111111 1233443 34567888886
Q ss_pred ------HcCCCCCCcCEEEccCCCCccCcHHHHHH
Q 010896 375 ------DAGVSPEEVNYVNAHATSTLAGDLAEVNA 403 (498)
Q Consensus 375 ------~Agl~~~dId~i~~hgtgt~~~D~~E~~a 403 (498)
++|++++|||++.+|.++++..+.+....
T Consensus 226 ~~~~~~~agl~~~did~~v~Hq~~~~i~~~~~~~L 260 (450)
T 2f82_A 226 KFEKLEGKEFSINDADYFVFHSPYNKLVQKSFARL 260 (450)
T ss_dssp HHHHHHSSCCCGGGCSEEEECCSSHHHHHHHHHHH
T ss_pred HhhhccccCCChhhcCEEEecCChHHHHHHHHHHh
Confidence 88999999999999999999887765443
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A | Back alignment and structure |
|---|
Probab=99.65 E-value=7.4e-16 Score=157.48 Aligned_cols=264 Identities=15% Similarity=0.093 Sum_probs=166.5
Q ss_pred CHHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHH
Q 010896 154 DDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLA 233 (498)
Q Consensus 154 d~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia 233 (498)
+....|+.+|+++||+++|++ ++++| .|+++++.+ ......+.+|+
T Consensus 100 ~~~~~La~~Aa~~aL~~ag~~---~~dId----~vi~~t~t~---------------------------~~~p~~a~~v~ 145 (393)
T 3ov2_A 100 EEIPRLAKEAAEKAIKEWGRP---KSEIT----HLVFCSISG---------------------------IDMPGADYRLA 145 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHTSC---GGGCC----EEEEEESSC---------------------------CCBSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCC---HHHCC----EEEEEEeCC---------------------------CCCCCHHHHHH
Confidence 457789999999999999994 45555 577876422 11234678899
Q ss_pred HhhcCCCC---ccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCC
Q 010896 234 IDTGLMGP---NYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDK 310 (498)
Q Consensus 234 ~~lgl~Gp---~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~ 310 (498)
..||+++. .+.+..+|++++.||..|.++|++|.++.+||+|+|.+... ... |.+ +.++.
T Consensus 146 ~~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~----------~~~-----~~d--~~~~~ 208 (393)
T 3ov2_A 146 TLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAENNRGARVLVVACEITVLS----------FRG-----PNE--GDFEA 208 (393)
T ss_dssp HHHTCCTTSEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECGGGT----------CCC-----CCT--TCHHH
T ss_pred HHcCCCCCcceeeEEcCccHHHHHHHHHHHHHHHcCCCCEEEEEEEeccchh----------ccC-----Ccc--cchhh
Confidence 99999874 58899999999999999999999999999999999973100 000 110 00000
Q ss_pred CCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEec-CCCCC-----C------CCCCCh-----HHHHHHHHHHH
Q 010896 311 DRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTC-DAHHM-----T------DPRSDG-----LGVSSCIAKSL 373 (498)
Q Consensus 311 ~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~-dg~~~-----~------~p~~~~-----~~~~~~i~~Al 373 (498)
....+++||||+|+||++.+.. .-...++-.+....... +.... . .....- ..+.++++++|
T Consensus 209 ~~~~~lFGDGAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L 287 (393)
T 3ov2_A 209 LAGQAGFGDGAGAVVVGADPLE-GIEKPIYEIAAAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERAL 287 (393)
T ss_dssp HHHHHHBCCEEEEEEEESSCCT-TTCCCSEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHTTSHHHHHHHH
T ss_pred hcccccccCccEEEEEEecCCC-cccCceeEEEecCcEEecCCcccCceeeeCCceEEEECcHHHHHHHHHHHHHHHHHH
Confidence 1246789999999999864421 00111222222111111 11000 0 001111 12356899999
Q ss_pred HHcCCCC-CCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCccccc-ccccccCCcchhhhHHHHHHHHHH-hhcCccCC
Q 010896 374 EDAGVSP-EEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMN-GTKSMIGHGLGAAGGLEAITTIKA-ITTGWLHP 449 (498)
Q Consensus 374 ~~Agl~~-~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~-s~K~~~Gh~~~AaG~~~li~a~~~-L~~g~ipp 449 (498)
+++|+++ +|| ++-.|-.+... .+++.+.++- ...+..+ .+-..+||+.+|+=.+.|-.++.. ++.|.+.|
T Consensus 288 ~~~gl~~~~di-~~v~Hq~n~~i-----~~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~~~~~g~~~~ 361 (393)
T 3ov2_A 288 APLGVREWNDV-FWVAHPGNWAI-----IDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRSTT 361 (393)
T ss_dssp GGGTCCSGGGS-EEEECCCCHHH-----HHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBT
T ss_pred HHcCCCcccCc-EEEECCCChHH-----HHHHHHHcCCCHHHHHHHHHHHHHhCChHHhHHHHHHHHHHHhhhhcCCcCC
Confidence 9999997 888 89999655443 3445555542 2233322 234568999999877776665543 23343310
Q ss_pred CCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEeeC
Q 010896 450 TLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 450 ~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
..+...++..+||.|-+..+++|+..
T Consensus 362 ---------------------G~~~d~vll~~fG~G~t~~~~ll~~~ 387 (393)
T 3ov2_A 362 ---------------------GDGLQWGVLLGFGPGLSIETVVLRSM 387 (393)
T ss_dssp ---------------------TTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred ---------------------CCCCCeEEEEEECccceeeeeeeEEc
Confidence 01125678889999999999999875
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.65 E-value=3.1e-15 Score=151.02 Aligned_cols=241 Identities=14% Similarity=0.143 Sum_probs=161.8
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+.+|+++||+++|++ ++++| .+++++..+. ......+.+++..
T Consensus 66 ~~~La~~Aa~~aL~~agi~---~~~Id----~vi~~t~~~~--------------------------~~~p~~a~~v~~~ 112 (354)
T 4efi_A 66 AGDLCRKAGEKLLAGLGWQ---ADSID----ALIFVSQTPN--------------------------YRLPATAFVLQAE 112 (354)
T ss_dssp HHHHHHHHHHHHHHHHTCC---GGGCC----EEEEECSSCS--------------------------CSSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCC---HHHCC----EEEEEeCCCC--------------------------CCCCcHHHHHHHH
Confidence 4589999999999999994 44555 6888864321 1123457889999
Q ss_pred hcCC--CCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCC
Q 010896 236 TGLM--GPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRD 313 (498)
Q Consensus 236 lgl~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~ 313 (498)
+|+. .|.+.++.+|+|++.||..|.++|++|.++.+||+|+|.+.... .+ +....
T Consensus 113 lGl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~----------------------~~-~d~~~ 169 (354)
T 4efi_A 113 LDLPASCLALDINLGCSGYPQALWLGMNLIQTGAAKRVLLAVGDTISKMI----------------------DP-TDRST 169 (354)
T ss_dssp TTCCTTSEEEEECCCTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGC----------------------CT-TCHHH
T ss_pred cCcCCCccEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhcccC----------------------Cc-ccccc
Confidence 9993 58899999999999999999999999999999999999731110 01 11123
Q ss_pred CccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCC---C------CCC-----------------CCCh-----
Q 010896 314 GFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHH---M------TDP-----------------RSDG----- 362 (498)
Q Consensus 314 G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~---~------~~p-----------------~~~~----- 362 (498)
.+++||||+|+||++.+. ..++ .+...+++.. . ..| ..++
T Consensus 170 ~~lfGDGA~A~vl~~~~~-----~~~~----~~~~~s~g~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~g~~v~~ 240 (354)
T 4efi_A 170 SLLFGDAGTMTALETSNG-----DAAA----HFIIGADGKGARNLIVPSGGFKPYDAAADERMAGKSPECLFMDGGEIFN 240 (354)
T ss_dssp HTTBCCEEEEEEEEECCS-----CCEE----EEEEEECGGGGGGEECCSSSSSCCCGGGCGGGTTCCTTSCEECHHHHHH
T ss_pred ccccccceeEEEEeecCC-----CCce----EEEEEEcCCCcceEEecCCCCCCCccccccccccccccceEEccHHHHH
Confidence 578999999999986431 1122 2222222210 0 001 0112
Q ss_pred ---HHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHH
Q 010896 363 ---LGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITT 438 (498)
Q Consensus 363 ---~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a 438 (498)
..+.++++++|+++|++++|||++-.|-.+... .+.+.+.++- ..++. ..-..+||+.+|+=.+.|..+
T Consensus 241 ~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~i-----~~~~~~~Lgl~~ek~~--~~l~~~GNt~sasi~~~L~~~ 313 (354)
T 4efi_A 241 FTLNAVPKLVSRTLDIAGRDKDSYDAFLFHQANLFM-----LKHLAKKAGLPAERVP--VNIGEYGNTSCASIPLLITTE 313 (354)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHH-----HHHHHHHTTCCGGGSC--CCHHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHHH-----HHHHHHHhCcCHHHHH--HHHhhhCcHHHHHHHHHHHHH
Confidence 244567899999999999999999999765544 3345555542 11222 234678999998866666553
Q ss_pred HHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 439 IKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 439 ~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
+ +.+.+ .+.+.++..+||.|-+..+++|+-
T Consensus 314 ~---~~g~~------------------------~~Gd~vll~~fG~G~t~~~~ll~~ 343 (354)
T 4efi_A 314 L---KDRLK------------------------EETLQLGMFGFGVGYSWASAALAV 343 (354)
T ss_dssp S---HHHHH------------------------HSCEEEEEEEEETTTEEEEEEEEE
T ss_pred H---HhCCC------------------------CCCCEEEEEEEchhhhheeeEEEE
Confidence 3 22222 122467788999999999998874
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A | Back alignment and structure |
|---|
Probab=99.62 E-value=1.4e-14 Score=147.81 Aligned_cols=262 Identities=14% Similarity=0.121 Sum_probs=159.4
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHH
Q 010896 153 LDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALL 232 (498)
Q Consensus 153 ~d~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~i 232 (498)
++....|+.+|+++||+++|++ +++++ .|++++..+ ......+.+|
T Consensus 93 ~~~~~~La~~Aa~~AL~~ag~~---~~dId----~li~~t~t~---------------------------~~~p~~a~~v 138 (387)
T 3oit_A 93 ADAVPELAAEAAKKAIAEWGRP---AADIT----HLVVTTNSG---------------------------AHVPGVDFRL 138 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSC---GGGCC----EEEEEESSC---------------------------CEESCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCC---HHHCC----EEEEEeeCC---------------------------CCcccHHHHH
Confidence 3467799999999999999994 45555 577876422 1123467889
Q ss_pred HHhhcCCCC---ccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCC
Q 010896 233 AIDTGLMGP---NYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWD 309 (498)
Q Consensus 233 a~~lgl~Gp---~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd 309 (498)
+..||+++. .+.+..+|++++.||..|..+|++|.++.+||+|+|.+.... . .|++ +.++
T Consensus 139 ~~~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~~-----------~----~~~d--~~~~ 201 (387)
T 3oit_A 139 VPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAELTLMYF-----------T----GPDE--GCFR 201 (387)
T ss_dssp HHHHTCCTTCEEEEEECCGGGHHHHHHHHHHHHHHSSTTCEEEEEEEECGGGTC-----------C----CCCS--SSCH
T ss_pred HHHhCCCCCcceeeEECchhHHHHHHHHHHHHHHhcCCCCEEEEEEEeccchhc-----------c----Cccc--cchH
Confidence 999999874 588999999999999999999999999999999999731000 0 0110 0011
Q ss_pred CCCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEec--CCCC-----CCC------CCCC-----hHHHHHHHHH
Q 010896 310 KDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTC--DAHH-----MTD------PRSD-----GLGVSSCIAK 371 (498)
Q Consensus 310 ~~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~--dg~~-----~~~------p~~~-----~~~~~~~i~~ 371 (498)
.....+++||||+|+||++.+. .......++.+.+... +... ... .... ...+.+++++
T Consensus 202 ~~~~~~lFGDGAaA~vl~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~ 278 (387)
T 3oit_A 202 TLLVQGLFGDGAAAVIVGADAD---DVERPLFEIVSAAQTIIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLD 278 (387)
T ss_dssp HHHHHHHBCCEEEEEEEESSCC---SSCCCCEEEEEEEEEECTTCTTSEEEEECSSSEEEEECTTHHHHHHHHHHHHHHH
T ss_pred hhhcccccccceEEEEEecCCC---cccCCceEEEecccEEeCCChhhccceeecCCeEEEECcHHHHHHHHHHHHHHHH
Confidence 1123678999999999987441 1111223344433221 1100 000 0011 2345668888
Q ss_pred HHHHc----CCCCCCcC--EEEccCCCCccCcHHHHHHHHHHhcC-CCccccc-ccccccCCcchhhhHHHHHHHHHHhh
Q 010896 372 SLEDA----GVSPEEVN--YVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMN-GTKSMIGHGLGAAGGLEAITTIKAIT 443 (498)
Q Consensus 372 Al~~A----gl~~~dId--~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~-s~K~~~Gh~~~AaG~~~li~a~~~L~ 443 (498)
+|+++ |++ |+| ++-.|-.+....| ++.+.++- ...+..+ .+-..+||+.+|+=.+.|-.+ .
T Consensus 279 ~L~~~~~~~gl~--d~d~~~~v~Hq~n~~il~-----~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~----~ 347 (387)
T 3oit_A 279 MFGPLLGGDGGG--GWNDLFWAVHPGSSTIMD-----QVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDEL----R 347 (387)
T ss_dssp HTGGGCC--------GGGSEEEECCCCHHHHH-----HHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHH----H
T ss_pred HHHhhcccCCCC--cccccEEEECCCCHHHHH-----HHHHHcCCCHHHHHHHHHHHHHhCchHHhHHHHHHHHH----H
Confidence 88888 887 566 9999966554433 44444542 2233322 234568999988866655443 2
Q ss_pred cCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEeeCC
Q 010896 444 TGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPFS 497 (498)
Q Consensus 444 ~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~~ 497 (498)
.+.+.+- . ...+...++..+||.|-+..+++|++.+
T Consensus 348 ~~~~~~G-----------------~-~g~~~d~vll~~fG~G~t~~~~ll~~~~ 383 (387)
T 3oit_A 348 RQRKEAA-----------------A-AGEWPELGVMMAFGPGMTVDAMLLHATS 383 (387)
T ss_dssp HC----------------------------CCEEEEEEEETTTEEEEEEEEECC
T ss_pred HhhhccC-----------------C-CCCCCCEEEEEEecccceeeeeeeEecc
Confidence 2222100 0 0011256788899999999999998753
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.2e-13 Score=139.33 Aligned_cols=245 Identities=24% Similarity=0.292 Sum_probs=157.3
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+.+|+++||+++|++ ++++| .+++++..+ ....+..+.+|...
T Consensus 62 ~~~la~~Aa~~aL~~ag~~---~~dId----~li~~t~t~--------------------------~~~~P~~a~~v~~~ 108 (350)
T 4ewp_A 62 VPVMAVGAAREALERAGLQ---GSDLD----AVIVSTVTF--------------------------PHATPSAAALVAHE 108 (350)
T ss_dssp HHHHHHHHHHHHHHHTTCC---GGGCS----EEEEECSCC--------------------------SCSSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCC---HHHCC----EEEEEeccC--------------------------CCCCCchHHHHHHH
Confidence 4579999999999999994 44555 466766321 12234567889999
Q ss_pred hcCCC-CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCC
Q 010896 236 TGLMG-PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDG 314 (498)
Q Consensus 236 lgl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G 314 (498)
||++. +++.+..+|++++.||..|..+|++|.++.+||.++|.. +.. + .+.| ....
T Consensus 109 LGl~~~~a~di~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~E~~-s~~----------~-----------d~~~-~~~~ 165 (350)
T 4ewp_A 109 IGATPAPAYDVSAACAGYCYGVAQADALVRSGTARHVLVVGVERL-SDV----------V-----------DPTD-RSIS 165 (350)
T ss_dssp TTCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEG-GGG----------C-----------CTTC-TTTG
T ss_pred hCCCCceEEEeecchhhHHHHHHHhhhhhhCCCccceeEeeeeec-eec----------c-----------cccc-cccc
Confidence 99976 678899999999999999999999999999999999962 111 1 1222 2346
Q ss_pred ccccceeEEEEEcchHHHHhcCCcEEEEEEeEE-Ee-----------------------cCCCCC------CCC--CCCh
Q 010896 315 FVMGEGCGILVMESLEHAMKRGANIIAEYLGGA-VT-----------------------CDAHHM------TDP--RSDG 362 (498)
Q Consensus 315 ~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~-~~-----------------------~dg~~~------~~p--~~~~ 362 (498)
+++||||+|+||+..+. ..+.....+.. .. .+.... ..+ ..++
T Consensus 166 ~lfgDGA~A~vl~~~~~-----~~~~~~~~~sdg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 240 (350)
T 4ewp_A 166 FLLGDGAGAVIVAASDE-----PGISPSVWGSDGERWSTISMTHSQLELRDAVEHARTTGDASAITGAEGMLWPTLRQDG 240 (350)
T ss_dssp GGBCEEEEEEEEEEESS-----CCBCCCEEEECGGGTTSEEESSCHHHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECH
T ss_pred cccccchheeeeecccC-----CCccceeeeecccccceeeecCCccccCcccccccccCCccccccccccccceeEehh
Confidence 78999999999986432 11111111110 00 000000 000 0123
Q ss_pred H--------HHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHH
Q 010896 363 L--------GVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGL 433 (498)
Q Consensus 363 ~--------~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~ 433 (498)
+ .+.++++++|+++|++++|||++..|-.+.... +.+.+.++- .... +...-..+||+.+|+=.+
T Consensus 241 ~~v~~~a~~~~~~~i~~~L~~~gl~~~did~~v~Hq~~~~i~-----~~~~~~Lgl~~~~~-~~~~l~~~GNtssasi~~ 314 (350)
T 4ewp_A 241 PSVFRWAVWSMAKVAREALDAAGVEPEDLAAFIPHQANMRII-----DEFAKQLKLPESVV-VARDIADAGNTSAASIPL 314 (350)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHTCCGGGEEEEEECCSCHHHH-----HHHHHHTTCCTTSE-ECCTHHHHCBCGGGHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHhhcCChhHhceEEecCCCHHHH-----HHHHHHcCcChHhE-EecccccccchHHHHHHH
Confidence 2 245789999999999999999999996654443 345555542 1121 112224579998887555
Q ss_pred HHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEe
Q 010896 434 EAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494 (498)
Q Consensus 434 ~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~ 494 (498)
.|..+ +++|.+. +.+.++..+||.|=+..++||+
T Consensus 315 ~L~~~---~~~g~~~------------------------~Gd~vll~~fG~G~t~~~~vlr 348 (350)
T 4ewp_A 315 AMHRL---LEENPEL------------------------SGGLALQIGFGAGLVYGAQVVR 348 (350)
T ss_dssp HHHHH---HHHCGGG------------------------TTSEEEEEEEETTTEEEEEEEE
T ss_pred HHHHH---HHhCCCC------------------------CcCEEEEEEEchhhEeEEEEEE
Confidence 55443 3444321 2246677799977677777776
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=99.52 E-value=7.2e-13 Score=137.46 Aligned_cols=262 Identities=13% Similarity=0.089 Sum_probs=159.1
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+.+|+++||+++|++ ++++| .|+++++. + ......+.+|+..
T Consensus 110 a~~La~~Aa~~AL~~agi~---~~dId----~li~~t~t-~--------------------------~~~P~~a~~v~~~ 155 (465)
T 3e1h_A 110 GVPLAVEASRKAMAEARLV---PAQIT----HMVSTTCT-D--------------------------SANPGYDHYVAKE 155 (465)
T ss_dssp THHHHHHHHHHHHHHHTCC---GGGCC----EEEEECSS-C--------------------------CCSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCC---HHHCC----EEEEEeeC-C--------------------------CCCCcHHHHHHHH
Confidence 3489999999999999994 45555 57777642 1 1223467889999
Q ss_pred hcCCC-C-cccc-ccccchHHHHHHHHHHHHHc----CCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcC
Q 010896 236 TGLMG-P-NYSI-STACATANYCFYAAANHIRR----GETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPW 308 (498)
Q Consensus 236 lgl~G-p-~~tv-~~acaS~l~Al~~A~~~I~~----G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpf 308 (498)
||++. + .+.| ..+|++++.||..|..+|++ |.++.+||+|+|.+ +...-....... ...
T Consensus 156 LGl~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a~~~~G~~~~vLVvg~E~~-S~~~~~~~~~~~-------------~~~ 221 (465)
T 3e1h_A 156 LGLSDRLEKVLLHGIGCSGGLAALRTAANLCLGHTARGKPARILVLALEVS-TTMVRSELESID-------------ALQ 221 (465)
T ss_dssp HTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEECC-GGGHHHHHHHHH-------------HHT
T ss_pred hCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcccccCCCCEEEEEEEeec-chhcCccccccc-------------ccc
Confidence 99987 3 4778 79999999999999999997 99999999999973 332111111100 011
Q ss_pred CCCCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecC--CCCC----------------CCCCCChHHHHHHHH
Q 010896 309 DKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCD--AHHM----------------TDPRSDGLGVSSCIA 370 (498)
Q Consensus 309 d~~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~d--g~~~----------------~~p~~~~~~~~~~i~ 370 (498)
+.....+++||||+|+||++.+... .....+..+.++..... +... ..+......+..+++
T Consensus 222 ~d~~t~~LFGDGAaAvVl~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~g~~V~~~a~~~v~~~i~ 300 (465)
T 3e1h_A 222 ETRIGIALFSDCASAVILSNGIGEA-PGKPAIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYA 300 (465)
T ss_dssp CCCCHHHHBCCEEEEEEEECCTTCC-TTCCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHH
T ss_pred cccccccccccceeEEEEEccCCCc-cccccceeeccceEEEecCCccccCccccCCCceEecChHHHHHHHHHHHHHHH
Confidence 1223457899999999998743210 00122234555433221 1100 000001235567888
Q ss_pred HHHHH-------cCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCccccc-ccccccCCcchhhhHHHHHHHHHH
Q 010896 371 KSLED-------AGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMN-GTKSMIGHGLGAAGGLEAITTIKA 441 (498)
Q Consensus 371 ~Al~~-------Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~-s~K~~~Gh~~~AaG~~~li~a~~~ 441 (498)
++|++ +|++++||||+ .|--+... .+++.+.++- ...+..+ ..-..+||+.+|+=.+.|-.+
T Consensus 301 ~~L~~~g~~L~~agl~~~DId~~-~Hqan~rI-----l~~v~~~Lgl~~ek~~~s~~~l~~yGNtsSASip~aL~~~--- 371 (465)
T 3e1h_A 301 DLLSSLQDQLPSSYQKPADFDWA-MHPGGATI-----LSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRL--- 371 (465)
T ss_dssp HHHHHHGGGSCTTSCSGGGSEEE-ECCSSHHH-----HHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHH---
T ss_pred HHHHhccccccccCCCHHHceEE-ecCCChHH-----HHHHHHHhCcCHHHhHHHHHHHhcceechHhHHHHHHHHH---
Confidence 88887 67999999999 99555443 3344444542 1122111 112346999888744444332
Q ss_pred hhc--CccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEee
Q 010896 442 ITT--GWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 442 L~~--g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
++. |.+.|. . .....++..+||.|=+..++||+.
T Consensus 372 ~~~~~g~l~~G-----------------g---~~~d~vll~gfG~Glt~~~~llr~ 407 (465)
T 3e1h_A 372 REKDMDALAPG-----------------G---KVKEYVVGCAFGPGINVEMCMLKR 407 (465)
T ss_dssp TSTTTTSCSSS-----------------S---CCCSEEEEEEEETTTEEEEEEEEE
T ss_pred HHhcccccCCC-----------------C---CCCCEEEEEEEhHHHhhhheeeEE
Confidence 222 222110 0 012567788999888888888875
|
| >3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=2.3e-13 Score=138.55 Aligned_cols=263 Identities=16% Similarity=0.122 Sum_probs=158.1
Q ss_pred cEEEEeeceecCCC-CCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHHH
Q 010896 87 RIVITGMGLVSVFG-SDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGR 165 (498)
Q Consensus 87 ~V~ItG~g~~~p~g-~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa~ 165 (498)
+|.|.|+|...|.- .+.+++-+.+ |.+ + .++ .... | + ....+..+. .....|+.+|++
T Consensus 7 ~v~I~~~g~y~P~~~v~~~~l~~~~--g~~---~-~~~-~~~~-----G-i---~~r~~~~~~-----e~~~~La~~Aa~ 65 (388)
T 3v4n_A 7 TIGIDKISFFVPPYYIDMTALAEAR--NVD---P-GKF-HIGI-----G-Q---DQMAVNPIS-----QDIVTFAANAAE 65 (388)
T ss_dssp CEEEEEEEEECCSEEEEHHHHHHHT--TSC---T-HHH-HTTT-----C-C---CEEECCCTT-----CCHHHHHHHHHH
T ss_pred eEEEEEEEEECCCeEEcHHHHHHHh--CCC---H-HHH-HHHh-----C-c---eEEEECCCC-----CCHHHHHHHHHH
Confidence 69999999999985 5666665543 111 0 000 0000 0 0 000000111 124589999999
Q ss_pred HHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCC--Ccc
Q 010896 166 RALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMG--PNY 243 (498)
Q Consensus 166 ~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~G--p~~ 243 (498)
+||+++| + ++++ .|++++..+. ......+.+|+..||+++ +.+
T Consensus 66 ~aL~~a~--~---~~Id----~li~~t~t~~--------------------------~~~ps~a~~v~~~LGl~~~~~~~ 110 (388)
T 3v4n_A 66 AILTKED--K---EAID----MVIVGTESSI--------------------------DESKAAAVVLHRLMGIQPFARSF 110 (388)
T ss_dssp TTCCHHH--H---HHEE----EEEEECSSCS--------------------------BSSSCHHHHHHHHTTCCSSCEEE
T ss_pred HHHHhCC--c---ccCC----EEEEEeccCC--------------------------CcCccHHHHHHHHcCCCCCceEe
Confidence 9999986 2 3343 4677764221 112346788999999986 788
Q ss_pred ccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeEE
Q 010896 244 SISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGI 323 (498)
Q Consensus 244 tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaaa 323 (498)
.+..+|++++.||..|..+|++|.++.+||+|+|... +-++. .+..++||||+|
T Consensus 111 dv~~aC~gg~~AL~~A~~~i~sg~~~~vLVvg~e~~s-------------------------~~~~~-~~~~lfGDGA~A 164 (388)
T 3v4n_A 111 EIKEAXYGATAGLQLAKNHVALHPDKKVLVVAADIAK-------------------------YGLNS-GGEPTQGAGAVA 164 (388)
T ss_dssp EEESGGGHHHHHHHHHHHHHHHCTTCEEEEEEEEEEC-------------------------CCTTC-TTGGGCEEEEEE
T ss_pred ehhhhhhHHHHHHHHHHHHHhcCCCCEEEEEEehhhc-------------------------ccCCC-CCCCccccceeE
Confidence 8999999999999999999999999999999999621 11111 235789999999
Q ss_pred EEEcchHHHHhcCCcEEEEEEe-EEEecCCCCCCCCC------CCh--------HHHHHHHHHHHHHcCCCCCCcCEEEc
Q 010896 324 LVMESLEHAMKRGANIIAEYLG-GAVTCDAHHMTDPR------SDG--------LGVSSCIAKSLEDAGVSPEEVNYVNA 388 (498)
Q Consensus 324 vvLe~~~~A~~~g~~i~a~I~g-~~~~~dg~~~~~p~------~~~--------~~~~~~i~~Al~~Agl~~~dId~i~~ 388 (498)
+||++.+ .+...-.. .+...+......|. .++ ..+..+++++|+++|++++|||++..
T Consensus 165 ~ll~~~~-------~il~~~~~~~~~~~~~~df~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~g~~~~did~~v~ 237 (388)
T 3v4n_A 165 MLVSSEP-------RILALKEDNVMLTQDIYDFWRPTGHPYPMVDGPLSNETYIQSFAQVWDEHKKRTGLDFADYDALAF 237 (388)
T ss_dssp EEEEESC-------SSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEE
T ss_pred EEeecCC-------CceEEeccccccchhccccccCCCCCCceeccHhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEe
Confidence 9998632 22221111 11111211101111 122 34567899999999999999999999
Q ss_pred cCCCCccCcHHHH-------HHHHHHhcCCCcccccccccccCCcchhhhHHHHHHHH
Q 010896 389 HATSTLAGDLAEV-------NAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTI 439 (498)
Q Consensus 389 hgtgt~~~D~~E~-------~al~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~ 439 (498)
|-..++..-+.-. +.+.+.++-. .-.....-..+||+.+|+=.+.|..++
T Consensus 238 Hqp~~k~~~ka~~ril~~~~~~~~~~l~~~-~e~~~~~~~~~GN~~sASi~l~L~~~l 294 (388)
T 3v4n_A 238 HIPYTKMGKKALLAKISDQTEAEQERILAR-YEESIIYSRRVGNLYTGSLYLGLISLL 294 (388)
T ss_dssp CCSSHHHHHHHHHHHSTTSCHHHHHHHHHH-HHHHTTTGGGTCCCGGGHHHHHHHHHH
T ss_pred CCCcchHHHHHHHHHHhcccHHHHHHhCCC-HHHHhhHHHhcCchHHHHHHHHHHHHH
Confidence 9755442211110 1222222210 001223446789999998666665544
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=99.49 E-value=1.4e-12 Score=128.12 Aligned_cols=187 Identities=20% Similarity=0.258 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+.+|+++||++||+ +++++| .+++|+... . ...+..++..
T Consensus 55 ~sdLa~~Aa~~AL~~AGi---~~~DID----~II~gt~t~--------------------------q---~~~A~~va~~ 98 (347)
T 3lma_A 55 ERKLMEDAVQSALSKQNL---KKEDID----IFLAGDLLN--------------------------Q---NVTANYVARH 98 (347)
T ss_dssp HHHHHHHHHHHHHHTTTC---CGGGCS----EEEEEESSS--------------------------S---STTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCC---CHHHCC----EEEEEeCCC--------------------------c---hhHHHHHHHH
Confidence 457999999999999999 445666 577776321 0 1145566666
Q ss_pred hcCCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCc
Q 010896 236 TGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGF 315 (498)
Q Consensus 236 lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~ 315 (498)
+++ |.+.|+++|+|++.||..|..+|++|.++.+||+|+|.+........|.. .-+..+|... .
T Consensus 99 Lgi--pafdV~~ACsg~~~AL~~Aa~~I~sG~~~~VLVVGaE~~S~aerq~r~p~----------e~g~q~p~ta----~ 162 (347)
T 3lma_A 99 LKI--PFLCLFGACSTSMESIAISSALIDGGFAKRALAATSSHNATAERQFRYPT----------EYGGQKPGTA----T 162 (347)
T ss_dssp HCC--CEEEBCCSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGTTCCC-----------------------------
T ss_pred hCC--CEEEecChhHHHHHHHHHHHHHHhcCCCCEEEEEEeccccchhhhccCcc----------hhcccCCchh----c
Confidence 654 89999999999999999999999999999999999997432211100000 0011223222 2
Q ss_pred cccceeEEEEEcchHHHHhcCCcEEEEEEeEEE--ecCCCCCCCCCCCh----HHHHHHHHHHHHHcCCCCCCcCEEEcc
Q 010896 316 VMGEGCGILVMESLEHAMKRGANIIAEYLGGAV--TCDAHHMTDPRSDG----LGVSSCIAKSLEDAGVSPEEVNYVNAH 389 (498)
Q Consensus 316 v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~--~~dg~~~~~p~~~~----~~~~~~i~~Al~~Agl~~~dId~i~~h 389 (498)
..++||||+||++.. ..+ +|++... ..| .....|...+ +...+.|++.|+++|++|+|+|+|..+
T Consensus 163 ~t~dGAGA~VL~~~g------~~p--~I~~~t~Gkvvd-~g~~d~~nmg~amaPaA~~ti~~~l~d~g~~~~d~D~ivtg 233 (347)
T 3lma_A 163 STVTGSGAVVLSQQP------GGI--KITSATVGRVID-LGITDSQDMGSAMAPAAADTIKQHLEDLGRTPDDYDLILTG 233 (347)
T ss_dssp -CCCEEEEEEEESSC------CSE--EEEEEECCCCBC-CSCCCTTCHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEE
T ss_pred EEccceeEEEEEecC------CCC--ceeeeeeeeeec-cCCCCCCCccccchHHHHHHHHHHHHHhCCCHHHcCEEecC
Confidence 345899999998532 222 2443322 112 1223333333 334567899999999999999999976
Q ss_pred CCCCccCcHHHHHH--HHHHhcC
Q 010896 390 ATSTLAGDLAEVNA--IKKVFKD 410 (498)
Q Consensus 390 gtgt~~~D~~E~~a--l~~~f~~ 410 (498)
|.-++.. +.+++..
T Consensus 234 -------dL~q~g~~il~~l~~~ 249 (347)
T 3lma_A 234 -------DLSGVGSPILKDLLKE 249 (347)
T ss_dssp -------SCHHHHHHHHHHHHHH
T ss_pred -------ChHHHHHHHHHHHHHH
Confidence 5544443 5666543
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.42 E-value=2.4e-11 Score=124.26 Aligned_cols=241 Identities=13% Similarity=0.028 Sum_probs=155.4
Q ss_pred HHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHH
Q 010896 155 DCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAI 234 (498)
Q Consensus 155 ~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~ 234 (498)
....|+.+|+++||+++|++ +++++ .|+++++.+ + .....+.+|+.
T Consensus 136 ~~~~La~~Aa~~AL~~agi~---~~dId----~li~~t~t~----------------------~-----~~P~~a~~v~~ 181 (413)
T 3v7i_A 136 AVQAYGERAARGALQIAGLD---VADVD----CLITSNSTT----------------------P-----ALPGLDVALAN 181 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTCC---GGGCC----EEEEECCSS----------------------C-----CSSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhCcC---HHHCC----EEEEEccCC----------------------C-----CcCHHHHHHHH
Confidence 46689999999999999994 45555 678886432 1 12235778999
Q ss_pred hhcCCCC--cccc-ccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCC
Q 010896 235 DTGLMGP--NYSI-STACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKD 311 (498)
Q Consensus 235 ~lgl~Gp--~~tv-~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~ 311 (498)
.+|+++. .+.+ ..+|++++.||..|.++|++|.++.+||+|+|.+... .++-|.
T Consensus 182 ~LGl~~~~~~~~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~~----------------------~~~~d~- 238 (413)
T 3v7i_A 182 RLPLRGDTMLLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEALSTT----------------------YQPADD- 238 (413)
T ss_dssp HTTCCTTCEEEEESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGGG----------------------CCSSCC-
T ss_pred HhCCCCCceEEEeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEeccccc----------------------cCcccc-
Confidence 9999863 4666 8999999999999999999999999999999973111 011111
Q ss_pred CC-----CccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEec--CCCCC-----------CCCCCC----hHHHHHHH
Q 010896 312 RD-----GFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTC--DAHHM-----------TDPRSD----GLGVSSCI 369 (498)
Q Consensus 312 ~~-----G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~--dg~~~-----------~~p~~~----~~~~~~~i 369 (498)
.. ..++||||+|+||++.+. ....-+|.+..... +.... ...+.. -..+..++
T Consensus 239 ~~~~lv~~~LFGDGAaAvvl~~~~~-----~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~m~~~v~~~v~~~~~~i 313 (413)
T 3v7i_A 239 TLESLIVRLLFADTAVAAVVTGRPR-----PESVLRLDAAWHHTLPGTRDLHRLETRADGTHFVMDRRGPRAVQETVTAM 313 (413)
T ss_dssp STTHHHHHHHBCCEEEEEEEESSCC-----TTEEEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHH
T ss_pred chhhhhcceeeccccEEEEEEecCC-----CCCCEEEEccccEEeCCCccccCccccCCceEEEECcHHHHHHHHHHHHH
Confidence 11 578999999999986432 01122444443221 11000 000111 12356688
Q ss_pred HHHHH------HcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhc--C-CCccc-ccccccccCCcchhhhHHHHHHHH
Q 010896 370 AKSLE------DAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFK--D-TSEMK-MNGTKSMIGHGLGAAGGLEAITTI 439 (498)
Q Consensus 370 ~~Al~------~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~--~-~~~~~-v~s~K~~~Gh~~~AaG~~~li~a~ 439 (498)
+++|+ ++|++ ||++-.|-.+... .+++.+.++ - ...+. ...+-. +||+.+|+=.+.|-.++
T Consensus 314 ~~~L~~~~~~~~~gl~---id~~v~Hq~~~~i-----l~~v~~~Lg~~l~~ek~~~s~~~l~-~GNtssAsi~~~L~~~~ 384 (413)
T 3v7i_A 314 WEWLRVRYEDDPSSWH---PDVLLAHPGGTRV-----LEYMEQTMPDEWPSGLLSYSRDSYT-SGNRGGAAVFDILRRAH 384 (413)
T ss_dssp HHHHHHHTSSSCTTCC---CCEEEEECSSHHH-----HHHHHHHSCSSCCSCSTHHHHHHHT-TCBCGGGHHHHHHHHHH
T ss_pred HHHHhhccccccCCCc---eeEEEECCCChHH-----HHHHHHHhCCCCCHHHhhccceEec-eeChHHHHHHHHHHHHH
Confidence 99999 88987 9999999655443 345556666 2 12221 123334 89999888665555543
Q ss_pred HHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEe
Q 010896 440 KAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494 (498)
Q Consensus 440 ~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~ 494 (498)
+. .+. +...++..+||.|=+..+++|+
T Consensus 385 ---~~-~~~------------------------~Gd~vll~~fG~Glt~~~~ll~ 411 (413)
T 3v7i_A 385 ---DA-GQK------------------------TGSRAVLYAAAPGLTATALEGE 411 (413)
T ss_dssp ---HH-CCC------------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred ---hC-CCC------------------------CCCEEEEEEECHHHhHhhhheE
Confidence 22 221 1246777899988887777775
|
| >2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.42 E-value=5.9e-12 Score=131.45 Aligned_cols=227 Identities=14% Similarity=0.138 Sum_probs=136.5
Q ss_pred cEEEEeeceecCCC-CCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHHH
Q 010896 87 RIVITGMGLVSVFG-SDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGR 165 (498)
Q Consensus 87 ~V~ItG~g~~~p~g-~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa~ 165 (498)
.|.|.|+|..+|.- .+.+++.+.+ |.+ + .++ .. .. | +.. ..+..+. .....|+.+|++
T Consensus 24 ~vgI~aig~y~P~~~v~~~el~~~~--g~~---~-~~~-~~----~~-G-i~~---r~~~~~~-----e~~~~La~~Aa~ 82 (478)
T 2p8u_A 24 DVGIVALEIYFPSQYVDQAELEKYD--GVD---A-GKY-TI----GL-G-QAK---MGFCTDR-----EDINSLCMTVVQ 82 (478)
T ss_dssp CCEEEEEEEECCSEEEEHHHHHHHH--TCC---T-TCC-CC----CC-C-CCE---EECCCTT-----CCHHHHHHHHHH
T ss_pred ceEEEEEEEECCCeEecHHHHHHHh--CCC---h-hHh-ec----cc-C-ceE---EEeCCCC-----CCHHHHHHHHHH
Confidence 58999999999985 5666666543 211 1 111 00 00 0 000 0000111 124689999999
Q ss_pred HHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhc---CCC-C
Q 010896 166 RALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTG---LMG-P 241 (498)
Q Consensus 166 ~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lg---l~G-p 241 (498)
+||+++|+++ ++++ .+++++..+. ......+.+|...|+ +++ +
T Consensus 83 ~aL~~agi~~---~dId----~li~~T~t~~--------------------------~~~ps~a~~v~~~L~~lG~~~~~ 129 (478)
T 2p8u_A 83 NLMERNNLSY---DCIG----RLEVGTETII--------------------------DKSKSVKTNLMQLFEESGNTDIE 129 (478)
T ss_dssp HHHHHTTCCG---GGEE----EEEEECSCCS--------------------------CSSSCHHHHHGGGTTTTTCCCCB
T ss_pred HHHHHcCCCH---HHCC----EEEEEccCCc--------------------------ccCccHHHHHHHHHhhcCCCCce
Confidence 9999999943 3343 4666664221 112345666774444 443 6
Q ss_pred ccccccccchHHHHHHHHHHHHHcCC--CcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccc
Q 010896 242 NYSISTACATANYCFYAAANHIRRGE--TDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGE 319 (498)
Q Consensus 242 ~~tv~~acaS~l~Al~~A~~~I~~G~--~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gE 319 (498)
.+.+..+|++++.||..|..+|++|. .+.+||.|+|.. . |.......+.||
T Consensus 130 ~~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Eia----------------~-----------~~~~~~~~~fGd 182 (478)
T 2p8u_A 130 GIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIA----------------V-----------YATGNARPTGGV 182 (478)
T ss_dssp CCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEE----------------C-----------CCSSTTGGGCEE
T ss_pred EEEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeeee----------------c-----------ccCCCCCCcccc
Confidence 78899999999999999999999999 999999999941 0 111123478999
Q ss_pred eeEEEEEcchHHHHhcCCcEEEE-EEeEEEecCCCCCCCC-------CCChHHH-----------HHHHHHHHH------
Q 010896 320 GCGILVMESLEHAMKRGANIIAE-YLGGAVTCDAHHMTDP-------RSDGLGV-----------SSCIAKSLE------ 374 (498)
Q Consensus 320 GaaavvLe~~~~A~~~g~~i~a~-I~g~~~~~dg~~~~~p-------~~~~~~~-----------~~~i~~Al~------ 374 (498)
||+|+||++.+. -++.. +.|.. ..+......| ..++... .+.+++.++
T Consensus 183 GA~A~Ll~~~~~------~~l~~~~~gs~-~~~~~d~~~p~~~~~~~~~dG~~s~~~y~~a~~~~~~~~~~~l~~~~~~~ 255 (478)
T 2p8u_A 183 GAVALLIGPNAP------LIFERGLRGTH-MQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIHAQWQKE 255 (478)
T ss_dssp EEEEEEEESSCS------EEECTTCCEEE-ECCCCSEECCCTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEEecCCC------ceEeeccceec-ccchhheeeecCCCcceEEcCcchHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 999999985321 01000 01221 1122222222 1233221 134566666
Q ss_pred --HcCCCCCCcCEEEccCCCCccCcHHHH
Q 010896 375 --DAGVSPEEVNYVNAHATSTLAGDLAEV 401 (498)
Q Consensus 375 --~Agl~~~dId~i~~hgtgt~~~D~~E~ 401 (498)
++|++++|||++..|..+.+..+.+..
T Consensus 256 ~~~~g~~~~did~~v~H~~~~ki~~~~~~ 284 (478)
T 2p8u_A 256 GNDKDFTLNDFGFMIFHSPYCKLVQKSLA 284 (478)
T ss_dssp TCCCCCCGGGCSEEEECCSSHHHHHHHHH
T ss_pred ccccCCChHHcCEEEecCCcHHHHHHHHH
Confidence 679999999999999888777666543
|
| >2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.10 E-value=8.8e-10 Score=114.78 Aligned_cols=223 Identities=14% Similarity=0.125 Sum_probs=129.9
Q ss_pred CCCcEEEEeeceecCCC-CCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHH
Q 010896 84 PKKRIVITGMGLVSVFG-SDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLV 162 (498)
Q Consensus 84 ~~~~V~ItG~g~~~p~g-~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~ 162 (498)
|.++|-|.|+|...|.- .+.+++-+.+ |.+ +.| +..+.| | ....+.++.| ....|++.
T Consensus 2 m~~~VgI~~~g~y~P~~~v~~~~l~~~~--~~~-----~~~----i~~~~G--i---~~r~~~~~~E-----~~~~ma~~ 60 (460)
T 2wya_A 2 MPKDVGILALEVYFPAQYVDQTDLEKYN--NVE-----AGK----YTVGLG--Q---TRMGFCSVQE-----DINSLCLT 60 (460)
T ss_dssp CCSSCEEEEEEEECCSEEEEHHHHHHHT--TCC-----TTC----CCCCCC--C---CEEECCCTTC-----CHHHHHHH
T ss_pred CCCceEEEEEEEECCCeEEcHHHHHHHh--CCC-----HHH----HHHhhC--c---EEEEECCCCC-----CHHHHHHH
Confidence 45679999999999986 4566654432 111 111 111111 0 0000111111 24579999
Q ss_pred HHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCCC-
Q 010896 163 AGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGP- 241 (498)
Q Consensus 163 aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~Gp- 241 (498)
|+++||+++|+++ ++++ -++++|..+ .......+..|...|++.|.
T Consensus 61 Aa~~al~~a~i~~---~~Id----~ii~aT~t~--------------------------~~~~ps~a~~v~~~l~~~g~~ 107 (460)
T 2wya_A 61 VVQRLMERIQLPW---DSVG----RLEVGTETI--------------------------IDKSKAVKTVLMELFQDSGNT 107 (460)
T ss_dssp HHHHHHHHHTCCG---GGEE----EEEEECSCC--------------------------SCSSSCHHHHHGGGTGGGTCC
T ss_pred HHHHHHHHcCCCH---HHCC----EEEEEeCCC--------------------------CCCCCchHHHHHHHHhccCCC
Confidence 9999999999943 3333 366776321 11233467788888887653
Q ss_pred ---ccccccccchHHHHHHHHHHHHHcCCCcE--EEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCcc
Q 010896 242 ---NYSISTACATANYCFYAAANHIRRGETDI--MVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFV 316 (498)
Q Consensus 242 ---~~tv~~acaS~l~Al~~A~~~I~~G~~d~--alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v 316 (498)
++-+..+|++++.||..|..+|++|..+. +|++..+. +. |........
T Consensus 108 ~~~a~D~~~aC~g~~~al~~A~~~i~~g~~~~~lvvv~~s~~----------------~~-----------~~d~~~~~~ 160 (460)
T 2wya_A 108 DIEGIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDI----------------AV-----------YPSGNARPT 160 (460)
T ss_dssp CCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEE----------------EC-----------CCSSTTGGG
T ss_pred CeeEechhhhhhhHHHHHHHHHHHHHhccccceEEEEEeccc----------------cc-----------ccccccccc
Confidence 46689999999999999999999998764 44443332 11 112233456
Q ss_pred ccceeEEEEEcchHHHHhcCCcEEEEEEeE-E-EecCCCC-------CCCCCCChHH-------------------HHHH
Q 010896 317 MGEGCGILVMESLEHAMKRGANIIAEYLGG-A-VTCDAHH-------MTDPRSDGLG-------------------VSSC 368 (498)
Q Consensus 317 ~gEGaaavvLe~~~~A~~~g~~i~a~I~g~-~-~~~dg~~-------~~~p~~~~~~-------------------~~~~ 368 (498)
.|+||++++++..+ .+ ..+.+. + ...+... ...|..++.. +..+
T Consensus 161 ~GdGA~A~l~~~~~-------~~-~~~~~~~~~~~~~~~df~~p~~~s~~~~~dg~~s~~~~~~~g~~v~~~~~~~~~~~ 232 (460)
T 2wya_A 161 GGAGAVAMLIGPKA-------PL-ALERGLRGTHMENVYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSYRKKIQNQ 232 (460)
T ss_dssp CEEEEEEEEEESSC-------SE-EECTTCCEEEECCCCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcchHHhhhcccCC-------cc-eeecccccccccchhhhhccCCCCCCcccCCccchHHHHHhhHHHHHHHHHHHHHH
Confidence 79999999998532 11 111111 1 1111111 1112223321 2234
Q ss_pred HHHHHHHcCCCCCCcCEEEccCCCCcc
Q 010896 369 IAKSLEDAGVSPEEVNYVNAHATSTLA 395 (498)
Q Consensus 369 i~~Al~~Agl~~~dId~i~~hgtgt~~ 395 (498)
+++++++++++++|+|++..|-...+.
T Consensus 233 ~~~~l~~~~~~~~d~d~~v~Hqp~~r~ 259 (460)
T 2wya_A 233 WKQAGSDRPFTLDDLQYMIFHTPFCKM 259 (460)
T ss_dssp HHHTTCCCCCCGGGCSEEEECCSSHHH
T ss_pred HHHHHHHcCCCHHHHhhhhhcccchHH
Confidence 555666789999999999999776554
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 498 | ||||
| d1j3na1 | 249 | c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II { | 3e-74 | |
| d2gfva1 | 250 | c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II { | 4e-71 | |
| d1e5ma1 | 250 | c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II { | 5e-65 | |
| d1ox0a1 | 256 | c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II | 1e-60 | |
| d2vbaa1 | 253 | c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {E | 1e-54 | |
| d2ix4a1 | 270 | c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II | 1e-51 | |
| d1tqya2 | 205 | c.95.1.1 (A:219-423) Actinorhodin polyketide putat | 2e-44 | |
| d1tqyb2 | 194 | c.95.1.1 (B:210-403) Actinorhodin polyketide putat | 4e-37 | |
| d1tqya1 | 216 | c.95.1.1 (A:3-218) Actinorhodin polyketide putativ | 2e-35 | |
| d2ix4a2 | 161 | c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II | 5e-35 | |
| d1e5ma2 | 161 | c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II | 1e-33 | |
| d1tqyb1 | 208 | c.95.1.1 (B:2-209) Actinorhodin polyketide putativ | 2e-31 | |
| d1j3na2 | 159 | c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II | 4e-31 | |
| d2gfva2 | 161 | c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II | 9e-31 | |
| d2vbaa2 | 151 | c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I | 4e-29 | |
| d1ox0a2 | 158 | c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II | 7e-29 |
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 249 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Score = 232 bits (593), Expect = 3e-74
Identities = 114/252 (45%), Positives = 163/252 (64%), Gaps = 4/252 (1%)
Query: 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYI 145
+R+V+TG+G ++ G + F+ L G+SG+ PI RFDAS+ VR ++ Y+
Sbjct: 2 RRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEVDVDP-GAYL 60
Query: 146 DGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVE 205
D K RRLD +Y L+A + ALE+A L P E++D R+G +VG+G+GG+ ++
Sbjct: 61 DRKELRRLDRFVQYALIAAQLALEDAGLKP---EDLDPERVGTLVGTGIGGMETWEAQSR 117
Query: 206 ALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRR 265
+++G +I+PFFIP I NM SA +A+ G GP+ ++ TACAT +A I+
Sbjct: 118 VFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGADALGSALRMIQL 177
Query: 266 GETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGILV 325
GE D+++AGGTEAAI P +G F RALS RNE P++ASRP+ RDGFVMGEG G+LV
Sbjct: 178 GEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRDGFVMGEGAGVLV 237
Query: 326 MESLEHAMKRGA 337
+E+ EHA KRGA
Sbjct: 238 LEAYEHAKKRGA 249
|
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Score = 224 bits (572), Expect = 4e-71
Identities = 116/253 (45%), Positives = 167/253 (66%), Gaps = 3/253 (1%)
Query: 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGY 144
K+R+V+TG+G++S G+ ++ + LL G+SGIS ID FD S+++ +F G ++DF+ +
Sbjct: 1 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDI 60
Query: 145 IDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGV 204
I K R++D +Y +VAG +A++++ L + TRIG +GSG+GGL
Sbjct: 61 ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEI---TEENATRIGAAIGSGIGGLGLIEENH 117
Query: 205 EALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIR 264
+L+ G +KI+PFF+P +I NM + L I GL GP+ SI+TA + + AA I
Sbjct: 118 TSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAQTSGVHNIGHAARIIA 177
Query: 265 RGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324
G+ D+MVAGG E A P GVGGF A RALS RN+ P+ ASRPWDK+RDGFV+G+G G+L
Sbjct: 178 YGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGML 237
Query: 325 VMESLEHAMKRGA 337
V+E EHA KRGA
Sbjct: 238 VLEEYEHAKKRGA 250
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Score = 209 bits (531), Expect = 5e-65
Identities = 110/253 (43%), Positives = 155/253 (61%), Gaps = 3/253 (1%)
Query: 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGY 144
KKR+V+TG+G ++ G+ + ++ L+EG +GI PI RFDAS + RFGG+++DF + +
Sbjct: 1 KKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQF 60
Query: 145 IDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGV 204
+D K +R+D + + A ++A+ +A L L + GV++G+G+GGL
Sbjct: 61 LDRKEAKRMDRFCHFAVCASQQAINDAKLVINELNADEI---GVLIGTGIGGLKVLEDQQ 117
Query: 205 EALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIR 264
L+ KG + +PF IP I NM S L AI+ G GPN TACA + A ++
Sbjct: 118 TILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQ 177
Query: 265 RGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324
G M+ GGTEAAI P GF + RALS RN+ P ASRP+DKDRDGFVMGEG GIL
Sbjct: 178 NGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGSGIL 237
Query: 325 VMESLEHAMKRGA 337
++E LE A+ RGA
Sbjct: 238 ILEELESALARGA 250
|
| >d1ox0a1 c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Score = 197 bits (502), Expect = 1e-60
Identities = 110/260 (42%), Positives = 153/260 (58%), Gaps = 4/260 (1%)
Query: 78 PKREKDPKKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIR 137
P+ R+V+TG G+ S G+ ++F+N L G+ GI I +FD S F V +I+
Sbjct: 1 PRGSHMKLNRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFDHSDFDVHNAAEIQ 60
Query: 138 DFSSKGYIDGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGL 197
DF Y K+ R D+ Y L A + A+ A+L + L +R R GV+V SG+GG+
Sbjct: 61 DFPFDKYFVKKDTNRFDNYSLYALYAAQEAVNHANLDVEAL---NRDRFGVIVASGIGGI 117
Query: 198 TSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFY 257
V L +KG K++ P +P ++ NM S +A+ G G SI+TAC+++N
Sbjct: 118 KEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSSNDAIG 177
Query: 258 AAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVM 317
A I+ G D+M+ GGTEA+I P + GF A ALS E P RAS P+DKDR+GFVM
Sbjct: 178 DAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALS-TTEDPTRASIPFDKDRNGFVM 236
Query: 318 GEGCGILVMESLEHAMKRGA 337
GEG G+LV+ESLEHA KRGA
Sbjct: 237 GEGSGMLVLESLEHAEKRGA 256
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Score = 182 bits (461), Expect = 1e-54
Identities = 87/255 (34%), Positives = 136/255 (53%), Gaps = 4/255 (1%)
Query: 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYI 145
KR VITG+G+VS G++ + L EG SGI+ S G ++ ++ I
Sbjct: 2 KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVKLDTTG-LI 60
Query: 146 DGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVE 205
D K R + D Y ++ +A+ +A LSP+ + R+G++ GSG G G +
Sbjct: 61 DRKVVRFMSDASIYAFLSMEQAIADAGLSPEAY--QNNPRVGLIAGSGGGSPRFQVFGAD 118
Query: 206 ALIQ-KGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIR 264
A+ +G K + P+ + ++ + SA LA + G NYSIS+ACAT+ +C A I+
Sbjct: 119 AMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQ 178
Query: 265 RGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324
G+ DI+ AGG E ++ N+ P++ASR +D RDGFV+ G G++
Sbjct: 179 LGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMV 238
Query: 325 VMESLEHAMKRGANI 339
V+E LEHA+ RGA+I
Sbjct: 239 VVEELEHALARGAHI 253
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Score = 174 bits (441), Expect = 1e-51
Identities = 96/272 (35%), Positives = 149/272 (54%), Gaps = 20/272 (7%)
Query: 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPI--DRFDASSF------------SVR 131
+R+V+TG+G+V+ G ++ + +L++GE GI + D SF S +
Sbjct: 1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSK 60
Query: 132 FGGQIRDFSSKGYIDGK---NDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGV 188
+ S+ G D N + + + Y + A AL +A P E ++ R GV
Sbjct: 61 VAAFVPYGSNPGEFDEALWLNSKAVANFIGYAVCAADEALRDAEWLP--TEEEEKERTGV 118
Query: 189 VVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTA 248
+G G+G + + + +K ++++PFFIP + NM S +++ G GPN++ TA
Sbjct: 119 SIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTA 178
Query: 249 CATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQR-NEYPKRASRP 307
CAT + A I+ G+ D+MVAGGTE++I V GF RALS + N P+ ASRP
Sbjct: 179 CATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRP 238
Query: 308 WDKDRDGFVMGEGCGILVMESLEHAMKRGANI 339
+D DRDGFV+GEG G++V+E EHA +RGA I
Sbjct: 239 FDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKI 270
|
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Score = 153 bits (387), Expect = 2e-44
Identities = 69/194 (35%), Positives = 107/194 (55%), Gaps = 1/194 (0%)
Query: 301 PKRASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRS 360
P+ ASRP+D RDGFV+ EG + V+E + A+ RGA I AE G A C+A+HMT ++
Sbjct: 3 PEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKA 62
Query: 361 DGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVF-KDTSEMKMNGT 419
DG ++ I +L+++ +++Y+NAH + T D E A K+ + ++
Sbjct: 63 DGREMAETIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSI 122
Query: 420 KSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAIS 479
KSM+GH LGA G LE + A+ G + PT N +PE +D VP ++ + ++
Sbjct: 123 KSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYVPLEARERKLRSVLT 182
Query: 480 NSFGFGGHNSVVVF 493
GFGG S +V
Sbjct: 183 VGSGFGGFQSAMVL 196
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 194 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Score = 133 bits (335), Expect = 4e-37
Identities = 55/196 (28%), Positives = 77/196 (39%), Gaps = 3/196 (1%)
Query: 301 PKRASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRS 360
P RA P+D+ G+V GEG ILV+E A RG + L
Sbjct: 2 PDRAYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELA--GCASTFDPAPGSG 59
Query: 361 DGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTK 420
G+ I +L DAG PE+V+ V A D AE AI +VF K
Sbjct: 60 RPAGLERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAEARAIGRVFGREGVPVTV-PK 118
Query: 421 SMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISN 480
+ G G L+ +T + ++ G + PT ++ E ID V + A+
Sbjct: 119 TTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGIDLVLGEPRSTAPRTALVL 178
Query: 481 SFGFGGHNSVVVFAPF 496
+ G G NS V F
Sbjct: 179 ARGRWGFNSAAVLRRF 194
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 216 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Score = 129 bits (325), Expect = 2e-35
Identities = 53/219 (24%), Positives = 88/219 (40%), Gaps = 9/219 (4%)
Query: 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYI 145
+R+VITG+G+ + G+ +F+ L G + I FD S + + +
Sbjct: 1 RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEADFDPVAEGF 60
Query: 146 DGKNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVE 205
+ R+D ++ + R A + L P + +D R+GV +GS + TS
Sbjct: 61 GPRELDRMDRASQFAVACAREAFAASGLDP---DTLDPARVGVSLGSAVAAATSLEREYL 117
Query: 206 A------LIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAA 259
+ ++ Y + ++ A +A G GP +ST C + A
Sbjct: 118 LLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGNA 177
Query: 260 ANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRN 298
I G D+M AG + I P V F A RA + RN
Sbjct: 178 VRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARN 216
|
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Score = 126 bits (318), Expect = 5e-35
Identities = 68/158 (43%), Positives = 90/158 (56%), Gaps = 4/158 (2%)
Query: 341 AEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAE 400
AE G ++ DAHH+T P DG G + ++L +G+ P +++YVNAHATST GD E
Sbjct: 2 AELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVE 61
Query: 401 VNAIKKVFKDTSEMKMNG---TKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLE 457
AIK VF + + TK GH LGAAG +EAI +I AI G TLN N +
Sbjct: 62 ARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPD 121
Query: 458 PEVTIDTVP-NVKKQHHVNVAISNSFGFGGHNSVVVFA 494
P +P K+ V A+SNSFGFGG N+ ++FA
Sbjct: 122 PIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFA 159
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Score = 122 bits (307), Expect = 1e-33
Identities = 73/159 (45%), Positives = 103/159 (64%), Gaps = 1/159 (0%)
Query: 339 IIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDL 398
I E +G A+TCDA+H+T P DG G + IA +L+D+G+ PE V+Y+NAH TST A D+
Sbjct: 2 IYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDV 61
Query: 399 AEVNAIKKVF-KDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLE 457
E AIK+ + ++ TKSM GH LG +GG+EA+ T+ AI + PT+N +N +
Sbjct: 62 TETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPD 121
Query: 458 PEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496
PE +D VP + V+VA+SNSFGFGGHN + F +
Sbjct: 122 PECDLDYVPGQSRALIVDVALSNSFGFGGHNVTLAFKKY 160
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Score = 118 bits (295), Expect = 2e-31
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 4/208 (1%)
Query: 88 IVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDG 147
++ITG+G+V+ G + +++ +L+G G+ P+ RFD S + GQI DF + +I G
Sbjct: 2 VLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHAPDHIPG 61
Query: 148 KNDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEAL 207
+ + D R L A AL++A P E++ +GVV + GG L
Sbjct: 62 RLLPQTDPSTRLALTAADWALQDAKADP---ESLTDYDMGVVTANACGGFDFTHREFRKL 118
Query: 208 IQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGE 267
+G K ++ + + + ++I G+ GP+ ++ A A IRRG
Sbjct: 119 WSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALVAEQAGGLDALGHARRTIRRGT 178
Query: 268 TDIMVAGGTEAAIIPTGVGGFIACRALS 295
++V+GG ++A+ P G IA +S
Sbjct: 179 -PLVVSGGVDSALDPWGWVSQIASGRIS 205
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 159 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Score = 115 bits (289), Expect = 4e-31
Identities = 77/156 (49%), Positives = 114/156 (73%), Gaps = 2/156 (1%)
Query: 339 IIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDL 398
I AE +G + DAHH+T+P +G G + +A++L+DAG++PE+V Y+NAH TST GD
Sbjct: 2 IYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDR 61
Query: 399 AEVNAIKKVFKDTSE-MKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLE 457
AEV AIK+VF D ++ + ++ TKSMIGH LGAAG +EAI T++A+ G + PT+N ++ +
Sbjct: 62 AEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPD 121
Query: 458 PEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 493
PE+ +D VP ++ V+ A+SNSF FGGHN+V+ F
Sbjct: 122 PELDLDFVPE-PREAKVDYALSNSFAFGGHNAVLAF 156
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Score = 114 bits (287), Expect = 9e-31
Identities = 66/157 (42%), Positives = 98/157 (62%), Gaps = 2/157 (1%)
Query: 339 IIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDL 398
I AE +G ++ DA+HMT P +G G + +A +L DAG+ ++ YVNAH TST AGD
Sbjct: 2 IYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDK 61
Query: 399 AEVNAIKKVFKDT-SEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLE 457
AE A+K +F + S + ++ TKSM GH LGAAG +E+I +I A+ + PT+N DN +
Sbjct: 62 AEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPD 121
Query: 458 PEVTIDTVPN-VKKQHHVNVAISNSFGFGGHNSVVVF 493
+D VP+ ++ + + NSFGFGG N ++F
Sbjct: 122 EGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIF 158
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 151 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Score = 110 bits (275), Expect = 4e-29
Identities = 52/153 (33%), Positives = 82/153 (53%), Gaps = 6/153 (3%)
Query: 341 AEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAE 400
AE +G T D M P G G C+ ++ ++Y+N+H TST GD+ E
Sbjct: 2 AEIVGYGATSDGADMVAP--SGEGAVRCMKMAMHG---VDTPIDYLNSHGTSTPVGDVKE 56
Query: 401 VNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEV 460
+ AI++VF D S ++ TK+M GH LGAAG EAI ++ + G++ P++N + L+ +
Sbjct: 57 LAAIREVFGDKS-PAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQA 115
Query: 461 TIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 493
+ + +SNSFGFGG N+ +V
Sbjct: 116 AGLNIVTETTDRELTTVMSNSFGFGGTNATLVM 148
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 158 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Score = 109 bits (273), Expect = 7e-29
Identities = 66/158 (41%), Positives = 92/158 (58%), Gaps = 2/158 (1%)
Query: 339 IIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDL 398
I+AE +G TCDA+HMT P +G G I +LE+A +SPE+V YVNAH TST A +
Sbjct: 2 ILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEK 61
Query: 399 AEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEP 458
E AI V + ++ TKS GH LGAAG +EAI TI+A+ ++ T +
Sbjct: 62 GESGAIVAVLGKE--VPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSD 119
Query: 459 EVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496
+ + V + + AISN+FGFGGHN+V+ F +
Sbjct: 120 YIEANVVYGQGLEKEIPYAISNTFGFGGHNAVLAFKRW 157
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 498 | |||
| d2gfva1 | 250 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 100.0 | |
| d1j3na1 | 249 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 100.0 | |
| d1ox0a1 | 256 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 100.0 | |
| d1e5ma1 | 250 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 100.0 | |
| d1tqya2 | 205 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d1tqyb2 | 194 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d2vbaa1 | 253 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 100.0 | |
| d2ix4a1 | 270 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 100.0 | |
| d1e5ma2 | 161 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 100.0 | |
| d1ox0a2 | 158 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 100.0 | |
| d1tqyb1 | 208 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d2gfva2 | 161 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 100.0 | |
| d1j3na2 | 159 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 100.0 | |
| d2ix4a2 | 161 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 100.0 | |
| d1tqya1 | 216 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d2vbaa2 | 151 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 100.0 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 99.51 | |
| d1m3ka1 | 268 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 99.41 | |
| d1ulqa1 | 273 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 99.32 | |
| d1wdkc1 | 262 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 99.32 | |
| d1afwa1 | 269 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 99.27 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 99.2 | |
| d1afwa2 | 124 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 99.14 | |
| d1ulqa2 | 125 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 99.13 | |
| d1wdkc2 | 128 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 99.13 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 99.09 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 99.09 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 99.09 | |
| d1m3ka2 | 124 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 99.07 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 98.79 | |
| d1bi5a1 | 235 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 98.65 | |
| d1xpma1 | 166 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 98.63 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 96.78 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 96.49 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 95.98 | |
| d1mzja2 | 153 | Priming beta-ketosynthase from the r1128 polyketid | 95.16 | |
| d1u0ma2 | 148 | Putative polyketide synthase SCO1206 {Streptomyces | 93.74 | |
| d1ee0a2 | 160 | Pyrone synthase (PyS, chalcone synthase 2) {Gerber | 86.53 | |
| d1bi5a2 | 154 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 85.94 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 83.1 |
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.9e-51 Score=395.10 Aligned_cols=250 Identities=46% Similarity=0.814 Sum_probs=239.4
Q ss_pred CCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHH
Q 010896 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAG 164 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa 164 (498)
++||||||||+++|+|.++++||++|++|+++|+++++|+...++.++++.|++|+...++++++.++|||+++|++.++
T Consensus 1 ~rrVaItG~G~vtp~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~l~aa 80 (250)
T d2gfva1 1 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAG 80 (250)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTCSCCEEECCTTCCCTTTSCHHHHTTSCHHHHHHHHHH
T ss_pred CCeEEEECCeeECCCcCCHHHHHHHHHcCCCeeecCCcccccccCCccceecccchhhhhhhhHHHhhcCHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred HHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCCCccc
Q 010896 165 RRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYS 244 (498)
Q Consensus 165 ~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~Gp~~t 244 (498)
++||+|||+ ..+..+..++||++|++.++.......+..+.......++|..++..+.|.++++|++.||++||+++
T Consensus 81 ~~Al~dAg~---~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~t 157 (250)
T d2gfva1 81 VQAMQDSGL---EITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSIS 157 (250)
T ss_dssp HHHHHHHTC---CCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHTTCCSCEEC
T ss_pred HHHHHhcCC---CccccCccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHHHHHHHHHhCCCCCccc
Confidence 999999999 45567788999999999999988888888888899999999999999999999999999999999999
Q ss_pred cccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeEEE
Q 010896 245 ISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324 (498)
Q Consensus 245 v~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaaav 324 (498)
|+++|+||+.||++|+++|++|+||++||||+|..++|..+..|..+++|+.+++.|++.|||||++++|+++|||++++
T Consensus 158 v~~aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~rdG~v~gEGaa~l 237 (250)
T d2gfva1 158 IATAQTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGML 237 (250)
T ss_dssp CCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCSBCBBCEEEEE
T ss_pred cccccchhhhhhHHHHHHHHcCCcchhhcccchhhcCcHHHHHHHhcccccCCCCCCCCccCCCCCCCCCEeeeeEEEEE
Confidence 99999999999999999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred EEcchHHHHhcCC
Q 010896 325 VMESLEHAMKRGA 337 (498)
Q Consensus 325 vLe~~~~A~~~g~ 337 (498)
|||++++|++||+
T Consensus 238 VLE~~~~A~~rGA 250 (250)
T d2gfva1 238 VLEEYEHAKKRGA 250 (250)
T ss_dssp EEEEHHHHHHHTC
T ss_pred EECcHHHHHHCcC
Confidence 9999999999985
|
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.5e-50 Score=388.69 Aligned_cols=249 Identities=46% Similarity=0.812 Sum_probs=234.5
Q ss_pred CCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHH
Q 010896 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAG 164 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa 164 (498)
++||||||||+++|+|.++++||++|++|+++|.++++|+...++..+.+.+ ++++..++++++.+++||++++++.++
T Consensus 1 M~rVaItG~G~vsp~g~~~~e~w~~l~~G~s~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~l~aa 79 (249)
T d1j3na1 1 MRRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEV-DVDPGAYLDRKELRRLDRFVQYALIAA 79 (249)
T ss_dssp CCCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECC-CCCGGGTSCHHHHTTSCHHHHHHHHHH
T ss_pred CCcEEEECCEeECCCcCCHHHHHHHHHcCCCccccCCccccccCCccccccc-cccccccccHHHHhhCCHHHHHHHHHH
Confidence 4689999999999999999999999999999999999999988887777765 455566789999999999999999999
Q ss_pred HHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCCCccc
Q 010896 165 RRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYS 244 (498)
Q Consensus 165 ~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~Gp~~t 244 (498)
++||+|||+ ..+.++..|+||++|++.++.......+....+.+...++|+.++..+.|.++++|++.||++||+++
T Consensus 80 ~~Al~dAGl---~~~~~~~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~gl~Gp~~t 156 (249)
T d1j3na1 80 QLALEDAGL---KPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSST 156 (249)
T ss_dssp HHHHHHHTC---CGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCBCC
T ss_pred HHHHHHcCC---ChhHcCCccEEEEEEECCCcccccccccccccccCccccChhhhccccchhhhhhhHhhcCCCCCccc
Confidence 999999999 55667788999999999999999988888888999999999999999999999999999999999999
Q ss_pred cccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeEEE
Q 010896 245 ISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324 (498)
Q Consensus 245 v~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaaav 324 (498)
|+++|+||+.||++|+++|++|+||+|||||+|..++|..+..|..+++|+..+..|++.|||||.+++|+++||||+++
T Consensus 157 v~~aCaSsl~Ai~~A~~~i~~G~~d~alvgg~d~~~~p~~~~~f~~~~~ls~~~~~p~~~~rPFd~~~dG~v~gEGa~~l 236 (249)
T d1j3na1 157 VVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRDGFVMGEGAGVL 236 (249)
T ss_dssp BCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCCBCBBCEEEEE
T ss_pred cccccchHHHHHHHHHHHHHcCCCCeeeecchHhhhCcHHHHHHHhCCcccCCCCCCCCCCCCccCCCCCEeeEeEEEEE
Confidence 99999999999999999999999999999999998999999999999999998888999999999999999999999999
Q ss_pred EEcchHHHHhcCC
Q 010896 325 VMESLEHAMKRGA 337 (498)
Q Consensus 325 vLe~~~~A~~~g~ 337 (498)
|||++++|++||+
T Consensus 237 vLe~~~~A~~rGA 249 (249)
T d1j3na1 237 VLEAYEHAKKRGA 249 (249)
T ss_dssp EEEEHHHHHHTTC
T ss_pred EEccHHHHHHCcC
Confidence 9999999999985
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=100.00 E-value=2.9e-49 Score=379.91 Aligned_cols=250 Identities=44% Similarity=0.818 Sum_probs=239.0
Q ss_pred CCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHH
Q 010896 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAG 164 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa 164 (498)
++||||||||+++|+|.++++||++|++|+++|+++++|+...++..+.+.++.+++.+.+++++.++|||++++++.++
T Consensus 1 ~~rVaItG~G~v~p~G~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~~~~~~a~ 80 (250)
T d1e5ma1 1 KKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFLDRKEAKRMDRFCHFAVCAS 80 (250)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEEECCCSCCGGGTSCHHHHHTSCHHHHHHHHHH
T ss_pred CCeEEEECCeeECCCCCCHHHHHHHHHcCCCeeccCCccccccccccccceeeecccccccchhhhhhcCcHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999889999999888887899999999999999999999
Q ss_pred HHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCCCccc
Q 010896 165 RRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYS 244 (498)
Q Consensus 165 ~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~Gp~~t 244 (498)
.+||++||+ ..+.+...+++|++|++.+....+...+..+.+++.....++.++..+.+.++.++++.||++||+++
T Consensus 81 ~~Al~~Agl---~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~t 157 (250)
T d1e5ma1 81 QQAINDAKL---VINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNC 157 (250)
T ss_dssp HHHHHHHTC---CCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCEEC
T ss_pred HHHHHHcCC---ChHhhcCCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcchhhhhHHHhccCCCCCcc
Confidence 999999999 55667788999999999999999999998888999999999999999999999999999999999999
Q ss_pred cccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeEEE
Q 010896 245 ISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGIL 324 (498)
Q Consensus 245 v~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaaav 324 (498)
|+++|+||+.||++|+++|++|++|++||||+|..++|..+..|.+++.|+..+++|++.|||||++++|+++|||++++
T Consensus 158 v~~ACsS~l~Ai~~A~~~i~~G~~d~~lvGg~~~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~~dG~~~gEGa~~~ 237 (250)
T d1e5ma1 158 TVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGSGIL 237 (250)
T ss_dssp CCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCCTTBTTCCSBCBBCEEEEE
T ss_pred ccccchhhhhhhHHHhhcccCCcccccccccchhhcCcHHHHHHHhcCCccCCCCCCCCccCCCCCCCCCEeeEeeEEEE
Confidence 99999999999999999999999999999999999999999999999999998889999999999999999999999999
Q ss_pred EEcchHHHHhcCC
Q 010896 325 VMESLEHAMKRGA 337 (498)
Q Consensus 325 vLe~~~~A~~~g~ 337 (498)
|||++++|++||+
T Consensus 238 vLe~l~~A~~rGA 250 (250)
T d1e5ma1 238 ILEELESALARGA 250 (250)
T ss_dssp EEEEHHHHHHTTC
T ss_pred EEeeHHHHHHCcC
Confidence 9999999999985
|
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=4.5e-50 Score=372.35 Aligned_cols=199 Identities=35% Similarity=0.604 Sum_probs=191.4
Q ss_pred CCCCCCCCcCCCCCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCC
Q 010896 299 EYPKRASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGV 378 (498)
Q Consensus 299 ~~p~~~~rpfd~~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl 378 (498)
++|++.|||||.+++||++|||++++|||++++|+++|++||++|+|+++++|+.+.+.+.|++..+.++++++|+++++
T Consensus 1 ~~P~~~~rpFD~~adG~v~gEGa~~~vL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~a~i 80 (205)
T d1tqya2 1 DDPEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRT 80 (205)
T ss_dssp SCGGGCCCTTBTTCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCccCCCCCEeeEeeEEEEEEeEHHHHHHCCCceEEEEEeeEccccccccCcccccccccchhhhhHHhhhcC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCC
Q 010896 379 SPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLE 457 (498)
Q Consensus 379 ~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~ 457 (498)
+++||+|||+|||||+.+|.+|+++|.++|+. ..+++|+++|+++||+++|||++++++++++|++|+|||++|+++++
T Consensus 81 ~~~~i~~ie~hgtGt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~~~ 160 (205)
T d1tqya2 81 DATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSD 160 (205)
T ss_dssp CGGGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSBB
T ss_pred CccceeeeeccccccccCchhHHHHHHHhhccccCCceeeeecccccccccccchhHHHHHHHHHhCCeEcccCCCCCCC
Confidence 99999999999999999999999999999985 35689999999999999999999999999999999999999999999
Q ss_pred CCCCcCcCCCcccccCccEEEEEccccccceeeEEEeeCC
Q 010896 458 PEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPFS 497 (498)
Q Consensus 458 ~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~~ 497 (498)
|++++++++.+.+..+.|++++|||||||+|+|+||++++
T Consensus 161 p~~~~~~v~~~~~~~~~~~a~~~s~GfGG~na~~vl~~~~ 200 (205)
T d1tqya2 161 PECDLDYVPLEARERKLRSVLTVGSGFGGFQSAMVLRDAE 200 (205)
T ss_dssp TTBCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEECHH
T ss_pred CCCCcccCCCCCcCCCCCEEEEeCCCCCceeEEEEEeeCC
Confidence 9999999998888888999999999999999999999874
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=1.6e-48 Score=358.18 Aligned_cols=193 Identities=31% Similarity=0.420 Sum_probs=180.3
Q ss_pred CCCCCCCcCCCCCCCccccceeEEEEEcchHHHHhcCC-cEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCC
Q 010896 300 YPKRASRPWDKDRDGFVMGEGCGILVMESLEHAMKRGA-NIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGV 378 (498)
Q Consensus 300 ~p~~~~rpfd~~~~G~v~gEGaaavvLe~~~~A~~~g~-~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl 378 (498)
+|++.|||||.+++||++|||++++|||++++|++||+ +||++|.|+++++|+.+.+ +.+.+ +.++|++||+++++
T Consensus 1 ~p~~~~rPFD~~a~G~~~gEGa~~~vLe~~~~A~~rg~~~i~a~i~g~~~~~d~~~~~-~~~~g--~~~~i~~aL~~a~i 77 (194)
T d1tqyb2 1 DPDRAYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGS-GRPAG--LERAIRLALNDAGT 77 (194)
T ss_dssp CGGGSCCTTSTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTC-CCCCS--HHHHHHHHHHHHTC
T ss_pred CCCCCcCcccCCCCCEeeEeeEEEEEEeEHHHHHhcCCceeeeeeecccccccccccc-cchhh--hhhhhhhhcccccc
Confidence 47899999999999999999999999999999999998 5999999999999987643 33444 58899999999999
Q ss_pred CCCCcCEEEccCCCCccCcHHHHHHHHHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCC
Q 010896 379 SPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEP 458 (498)
Q Consensus 379 ~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~ 458 (498)
+++||+|||+|||||+.+|.+|.++|.++|+. ..++++++|+++||+++|||++++++++++|++|+|||++|++++++
T Consensus 78 ~~~di~~v~ahgtGt~~~D~~E~~al~~~f~~-~~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~~~~ 156 (194)
T d1tqyb2 78 GPEDVDVVFADGAGVPELDAAEARAIGRVFGR-EGVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPR 156 (194)
T ss_dssp CGGGCCEEECCCCCSHHHHHHHHHHHHHHHCT-TCSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCG
T ss_pred cccceeeeeccccCcccccHHHhhhhhhhhhc-cccccccccccccccccccccceehhhhhhhhhceeccccCCCCCCc
Confidence 99999999999999999999999999999976 46899999999999999999999999999999999999999999999
Q ss_pred CCCcCcCCCcccccCccEEEEEccccccceeeEEEeeC
Q 010896 459 EVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 459 ~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
+++++.++...+...++++++|+|||||+|+|+||++|
T Consensus 157 ~~~~~~v~~~~~~~~~~~a~v~s~GfgG~na~~vl~~~ 194 (194)
T d1tqyb2 157 EYGIDLVLGEPRSTAPRTALVLARGRWGFNSAAVLRRF 194 (194)
T ss_dssp GGCCEECBSSCBCCCCSEEEEEEEETTTEEEEEEEEEC
T ss_pred ccCccccCCCCccCCCCEEEEECcCCCceeEEEEEeeC
Confidence 99988888777778899999999999999999999997
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=7e-45 Score=349.78 Aligned_cols=251 Identities=37% Similarity=0.575 Sum_probs=218.6
Q ss_pred CCcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHH
Q 010896 85 KKRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAG 164 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa 164 (498)
++||||||||+++|+|.++++||++|++|+++|+++++|+...++....+.+.. ....+++....+.+++..++.+.++
T Consensus 1 m~RVvITG~G~i~p~G~~~~~~w~~L~~G~sgi~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (253)
T d2vbaa1 1 MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVKL-DTTGLIDRKVVRFMSDASIYAFLSM 79 (253)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHHHHHTTCSCCEEECCCC-CCTTSSCHHHHTTCCHHHHHHHHHH
T ss_pred CCcEEEEccEEECCCCCCHHHHHHHHHcCCCccccCCccccccCcccccccccc-cccccccchhhccchhhhhhhhHHH
Confidence 468999999999999999999999999999999999988887777777776654 4445578888999999999999999
Q ss_pred HHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHH-HHhcCCCcCCccccchhhhhhHHHHHHhhcCCCCcc
Q 010896 165 RRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEAL-IQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNY 243 (498)
Q Consensus 165 ~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~Gp~~ 243 (498)
.+|++++|+..+ ...+..++|+++|+..++.......+..+ ..++...++|+.++..+.|.++++|++.||++||++
T Consensus 80 ~~a~~~~~l~~~--~~~~~~r~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g~~Gp~~ 157 (253)
T d2vbaa1 80 EQAIADAGLSPE--AYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNY 157 (253)
T ss_dssp HHHHHHHTCCHH--HHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTTTCCSCEE
T ss_pred HHHHHHhhccch--hccCCCCEEEEeccccccccccccccccccccCCccccCchhhhccccccccceeccccCccccee
Confidence 999999999532 23456789999999998877665544443 233455678888999999999999999999999999
Q ss_pred ccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccC-CCCCCCCCCcCCCCCCCccccceeE
Q 010896 244 SISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQR-NEYPKRASRPWDKDRDGFVMGEGCG 322 (498)
Q Consensus 244 tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~-~~~p~~~~rpfd~~~~G~v~gEGaa 322 (498)
+|+++|+||+.||++|+++|++|+||++||||+|.. .+..+..|.+++.++.. +.+|++.|||||.+++||++|||++
T Consensus 158 ~i~taCaSsl~Ai~~A~~~i~~G~~d~alvgg~~~~-~~~~~~~~~~~~~ls~~~~~~P~~~~rPFD~~~~G~v~gEGa~ 236 (253)
T d2vbaa1 158 SISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEEL-CWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGG 236 (253)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECC-CHHHHHHHHHTTCBCCSCTTSGGGSCCTTBTTCCSBCBBCEEE
T ss_pred eeeccchhHHHHHHHHHHhcchhccceeeecchhhh-hcchhhhHHHHHHHhcCCCCCCCCCCCCCCCCCCCEeeeeEEE
Confidence 999999999999999999999999999999999984 55557788999888764 6678999999999999999999999
Q ss_pred EEEEcchHHHHhcCCcE
Q 010896 323 ILVMESLEHAMKRGANI 339 (498)
Q Consensus 323 avvLe~~~~A~~~g~~i 339 (498)
++|||++++|++||++|
T Consensus 237 ~lvLe~le~A~~rGa~I 253 (253)
T d2vbaa1 237 MVVVEELEHALARGAHI 253 (253)
T ss_dssp EEEEEEHHHHHHTTCCC
T ss_pred EEEEccHHHHHHccCcC
Confidence 99999999999999986
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=100.00 E-value=2.2e-42 Score=335.09 Aligned_cols=252 Identities=37% Similarity=0.664 Sum_probs=211.8
Q ss_pred CcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCC--CCCC------------CcccccccCCCCC-CCC--CCcc
Q 010896 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFD--ASSF------------SVRFGGQIRDFSS-KGY--IDGK 148 (498)
Q Consensus 86 ~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~--~~~~------------~~~~~g~i~~~d~-~~~--i~~~ 148 (498)
+||||||||+++|+|.++++||++|++|+++|.++++++ ...+ +.+++++++.+.. ..+ ...+
T Consensus 1 rRVvITG~G~vsP~G~~~ee~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (270)
T d2ix4a1 1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDEALWL 80 (270)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCGGGGCCTTSCHHHHHHHHHTCSCCEEECCCBSSSTTSBCHHHHS
T ss_pred CeEEEECceeECCCcCCHHHHHHHHHcCCCeeccCChhhcccccccccccccccccccceeeeecccccCchhhhHHHhh
Confidence 589999999999999999999999999999999886443 3222 2345566655332 222 1223
Q ss_pred ccccCCHHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhh
Q 010896 149 NDRRLDDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMG 228 (498)
Q Consensus 149 ~~~~~d~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~ 228 (498)
...++++....++.+..+|+.+++.... ......+.++.++.+.+.....................++.+++.+.|.+
T Consensus 81 ~~~~~~~~~~~a~~a~~~A~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (270)
T d2ix4a1 81 NSKAVANFIGYAVCAADEALRDAEWLPT--EEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMA 158 (270)
T ss_dssp CSTTCCHHHHHHHHHHHHHHHHTTCCCC--SHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHH
T ss_pred hhhhhhhhHHHHHHHHHHHHHHhhhccc--cccccccceEEeeccccccccchhhcchhhhccccccCcccCcccccchh
Confidence 4566788888999999999999987421 22334567777777777766666666666677778889999999999999
Q ss_pred HHHHHHhhcCCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccC-CCCCCCCCCc
Q 010896 229 SALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQR-NEYPKRASRP 307 (498)
Q Consensus 229 a~~ia~~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~-~~~p~~~~rp 307 (498)
+++|++.||++||+++|+++|+||+.||++|+++|++|+||+|||||+|..+.|..+..|..+++|+.. +++|++.|||
T Consensus 159 a~~is~~~~l~Gp~~~v~~aCaSsl~Ai~~A~~~l~~G~~d~aivgg~~~~~~p~~~~~~~~~~~ls~~~~~~p~~~~rP 238 (270)
T d2ix4a1 159 SGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRP 238 (270)
T ss_dssp HHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSCCT
T ss_pred HHHHHHHhCCCCCCcccccccchhhHHHHHHHHHHHcCCCCeeccccchhhhhhhhHHHHHhcccccCCCCCCCCCccCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999875 5678999999
Q ss_pred CCCCCCCccccceeEEEEEcchHHHHhcCCcE
Q 010896 308 WDKDRDGFVMGEGCGILVMESLEHAMKRGANI 339 (498)
Q Consensus 308 fd~~~~G~v~gEGaaavvLe~~~~A~~~g~~i 339 (498)
||++++|+++|||++++|||++++|++||++|
T Consensus 239 FD~~a~G~v~gEGaa~~vLe~l~~A~~rG~~I 270 (270)
T d2ix4a1 239 FDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKI 270 (270)
T ss_dssp TBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCC
T ss_pred CCCCCCCEeeEeeEEEEEEeeHHHHHHccCCC
Confidence 99999999999999999999999999999986
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=100.00 E-value=2.8e-41 Score=300.44 Aligned_cols=160 Identities=46% Similarity=0.749 Sum_probs=154.0
Q ss_pred cEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccc
Q 010896 338 NIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKM 416 (498)
Q Consensus 338 ~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v 416 (498)
+|||+|+|+++++|+++.+.|+|+++++.++|++||++||++|+||+|||+|||||+.+|.+|..+|+++|++ ..+++|
T Consensus 1 rIya~i~G~~~~~Dg~~~~~~~p~g~~~~~~i~~Al~~a~i~~~~i~~v~~HgtGT~~~D~~E~~al~~vf~~~~~~~~v 80 (161)
T d1e5ma2 1 KIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAV 80 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEE
T ss_pred CEEEEEeeEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHcCCChhhcceEEEeccCCcccchHHhhhhhhccccCCCcceE
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999986 346899
Q ss_pred cccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEeeC
Q 010896 417 NGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 417 ~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
+|+|+++||+++|||++++++++++|++++|||++|+++|+|.++++.++.+.+....+++++|||||||+|+|+||++|
T Consensus 81 ~s~K~~~GH~~~AsG~~~l~~~l~~~~~g~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfGG~Na~lvl~~y 160 (161)
T d1e5ma2 81 SSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVPGQSRALIVDVALSNSFGFGGHNVTLAFKKY 160 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred EecccccccccccchhhHHHHhHHhcccCeeCCccCCCCCCCCCCcccCcCcccCCCCCEEEEeCcCcCcEeEEEEEeee
Confidence 99999999999999999999999999999999999999999999998888888888899999999999999999999998
Q ss_pred C
Q 010896 497 S 497 (498)
Q Consensus 497 ~ 497 (498)
.
T Consensus 161 ~ 161 (161)
T d1e5ma2 161 Q 161 (161)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=3.2e-41 Score=298.89 Aligned_cols=158 Identities=42% Similarity=0.638 Sum_probs=153.0
Q ss_pred cEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcCCCccccc
Q 010896 338 NIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMN 417 (498)
Q Consensus 338 ~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~v~ 417 (498)
+|||+|+|+++++|+++++.|+|+++++.++|++||+++++.|+||||||+|||||+.+|.+|..+|+++|++ .++++
T Consensus 1 tIyaei~G~~~~~Dg~~~~~p~p~g~~~~~~~~~al~~a~l~p~~i~~v~aHgtgT~~~D~~E~~ai~~~fg~--~~~v~ 78 (158)
T d1ox0a2 1 TILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGK--EVPVS 78 (158)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHCS--SSEEE
T ss_pred CEEEEEEEEEEcCCCCCCcCCCCCHHHHHHHHHHhhccccccceeeeEEeeeccccccchhHHHHHHHHhcCC--cccCc
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999986 68999
Q ss_pred ccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEeeCC
Q 010896 418 GTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPFS 497 (498)
Q Consensus 418 s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~~ 497 (498)
++|+++||+++|||++++++++++|++++|||++|+++++|.++++.++...+..+.+++++|||||||+|+|+||++|.
T Consensus 79 s~Ks~iGH~~~asG~~~l~~~l~~l~~g~iPp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfGG~Na~lvl~~~~ 158 (158)
T d1ox0a2 79 STKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVYGQGLEKEIPYAISNTFGFGGHNAVLAFKRWE 158 (158)
T ss_dssp CTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSEECBSSCEECCCSEEEEEEEETTTEEEEEEEECCC
T ss_pred CcccccccchhhhhhhhhcccccccccceeccccCCCCCCcccCcccccCccccCCCCEEEEeCcCCCcEeEEEEEEecC
Confidence 99999999999999999999999999999999999999999999998888888888999999999999999999999995
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=3.1e-39 Score=300.94 Aligned_cols=205 Identities=28% Similarity=0.445 Sum_probs=196.7
Q ss_pred EEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHHHHH
Q 010896 88 IVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRA 167 (498)
Q Consensus 88 V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa~~A 167 (498)
|||||||+++|+|.|+++||++|++|+++|+++++|+...++.++++++++|++..++++++.+.|||++++++.++.+|
T Consensus 2 VvITG~G~vsp~g~~~~~~w~~L~~G~sgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~A 81 (208)
T d1tqyb1 2 VLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHAPDHIPGRLLPQTDPSTRLALTAADWA 81 (208)
T ss_dssp EEEEEEEEEETTEESHHHHHHHHHTTCCCEEECTTTTGGGSSCCEEECCCSCCHHHHSCTTTGGGCCHHHHHHHHHHHHH
T ss_pred EEEEcceeECCCcCCHHHHHHHHHcCCCceecCcccCchhcccccccccccccccccCChhHhhcccccccccccccccc
Confidence 89999999999999999999999999999999999999999999999999999888889999999999999999999999
Q ss_pred HHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCCCcccccc
Q 010896 168 LEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSIST 247 (498)
Q Consensus 168 L~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~Gp~~tv~~ 247 (498)
|+|||+ ..+.++..++|+++|++.++.......+..+.....+...|+.++..+.|+.+++|++.||++||++++++
T Consensus 82 l~~Ag~---~~~~~~~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~tv~t 158 (208)
T d1tqyb1 82 LQDAKA---DPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALVA 158 (208)
T ss_dssp HHHTTC---CGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTCCSSCEEEEC
T ss_pred chhhhc---ccccccccccccccccccccccccchhhhhhccccccccccccccccccccccchhhhcccccceeeeccc
Confidence 999999 55667788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhcccccc
Q 010896 248 ACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQ 296 (498)
Q Consensus 248 acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~ 296 (498)
+|+||+.||+.|+++|++| +|+|||||+|..++|+.+..|.++++||+
T Consensus 159 ACaS~l~Ai~~A~~~I~~G-~d~~lvGG~d~~l~p~~~~~f~~~~~lSt 206 (208)
T d1tqyb1 159 EQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRIST 206 (208)
T ss_dssp GGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCC
T ss_pred cccHHHHHHHHHHHHHHcC-CCEEEECccccccCHHHHHHHHHcCCCCC
Confidence 9999999999999999999 99999999999999999999999999985
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2e-39 Score=288.75 Aligned_cols=159 Identities=42% Similarity=0.662 Sum_probs=148.0
Q ss_pred cEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccc
Q 010896 338 NIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKM 416 (498)
Q Consensus 338 ~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v 416 (498)
+|||+|+|+++++||.+.+.|+|+++++.++|+++|++++++|+||+|||+|||||+++|.+|.++|+++|++ ..++++
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~a~i~p~~i~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i 80 (161)
T d2gfva2 1 KIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLV 80 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGTTSEE
T ss_pred CEEEEEeeEEEeCCCCCCCCCCCCHHHHHHHHHHhHhhcccCcceEEEEEeecccCcccHHHHHHHHHHHhcccccccee
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999986 457899
Q ss_pred cccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCccc-ccCccEEEEEccccccceeeEEEee
Q 010896 417 NGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKK-QHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 417 ~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~-~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
+++|+++||+++|||++++++++++|++++|||++|+.++++.+.+..++...+ ..+++++++|||||||+|+|+||++
T Consensus 81 ~s~Ks~~GH~~~AsG~~~li~~ll~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~vnsfGfgG~Na~lil~~ 160 (161)
T d2gfva2 81 SSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKK 160 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHSCEECCBTTCSSBCTTCCSBCCBSSCEECSSCCEEEEEEEEGGGEEEEEEEEC
T ss_pred ccccccccccHHHHHHHHHHHHHHHhcCCEecccccccccccccccccccccCccCCCCcEEEEeCcCccceeEEEEEEE
Confidence 999999999999999999999999999999999999999999988766554433 4567999999999999999999997
Q ss_pred C
Q 010896 496 F 496 (498)
Q Consensus 496 ~ 496 (498)
.
T Consensus 161 ~ 161 (161)
T d2gfva2 161 I 161 (161)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=2.9e-39 Score=286.94 Aligned_cols=158 Identities=49% Similarity=0.806 Sum_probs=149.0
Q ss_pred cEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccc
Q 010896 338 NIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKM 416 (498)
Q Consensus 338 ~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v 416 (498)
+||++|+|+++++||++.+.|+|+++++..+++++|+++|++|+||||||+|||||+.+|.+|..+|+++|+. ..++++
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~agi~p~~I~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i 80 (159)
T d1j3na2 1 RIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMV 80 (159)
T ss_dssp CCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred CEEEEEeEEEEeCCCCCCCCCCcCHHHHHHHhhccHhhcCCCHHHcCeEeccccCCccchHHHHHHHHHHHHhcCCCceE
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999975 346889
Q ss_pred cccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEeeC
Q 010896 417 NGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 417 ~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
+++|+++||+++|||++++++++++|++++|||++|++++++++++..++.. +..+++++++|||||||+|+|+||+|.
T Consensus 81 ~s~K~~~GH~~~asG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~-~~~~~~~a~v~sfGfgG~Na~~vl~kv 159 (159)
T d1j3na2 81 SSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVPEP-REAKVDYALSNSFAFGGHNAVLAFKRV 159 (159)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBCCSSC-EECCCSEEEEEEECTTSEEEEEEEECC
T ss_pred ecccccccccccccccchhhhhhhHhhCCEeccccccccccceeeeeccCcc-cCCCCCEEEEeCCCCCceeEEEEEEEC
Confidence 9999999999999999999999999999999999999999999998877654 456789999999999999999999973
|
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=100.00 E-value=4e-39 Score=286.61 Aligned_cols=157 Identities=43% Similarity=0.655 Sum_probs=147.4
Q ss_pred EEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC---CCcccc
Q 010896 340 IAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD---TSEMKM 416 (498)
Q Consensus 340 ~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~---~~~~~v 416 (498)
|++|+|+++++|+++++.|+|+++++.++|+++|+++++.|+||+|||+|||||+++|.+|+++++++|+. ..++++
T Consensus 1 Y~~i~G~~~~~Dg~~~t~p~~~g~~~~~~~~~al~~a~~~~~di~yveaHGtGT~~gD~~E~~al~~~~~~~~~~~~~~i 80 (161)
T d2ix4a2 1 YAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAF 80 (161)
T ss_dssp CEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEE
T ss_pred CeEEEEEEEcCCCCCCcCCChhHHHHHHHHHHHHHhcCCCccccCEEEEeccCCCCCcHHHHhhhHhhhcccccccceee
Confidence 79999999999999999999999999999999999999999999999999999999999999999999985 356899
Q ss_pred cccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCC-cccccCccEEEEEccccccceeeEEEee
Q 010896 417 NGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPN-VKKQHHVNVAISNSFGFGGHNSVVVFAP 495 (498)
Q Consensus 417 ~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~-~~~~~~~~~alv~s~G~gG~n~~~vl~~ 495 (498)
+|+|+++||+++|||++++++++++|+++++||++|++++||.++...++. ..++..+|++++|||||||+|+|+||++
T Consensus 81 ~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfgG~Na~lvl~~ 160 (161)
T d2ix4a2 81 SSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 160 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTCCSSSCCCSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred eccccccCCccchHHHHHHHHHHHHHhcCCCCCccCCCCCCcccCcccCccccCCCCCcCEEEEeCCcccceeEEEEEEe
Confidence 999999999999999999999999999999999999999999999877653 3445678999999999999999999997
Q ss_pred C
Q 010896 496 F 496 (498)
Q Consensus 496 ~ 496 (498)
.
T Consensus 161 ~ 161 (161)
T d2ix4a2 161 I 161 (161)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=3.5e-37 Score=288.66 Aligned_cols=209 Identities=25% Similarity=0.388 Sum_probs=186.6
Q ss_pred CcEEEEeeceecCCCCCHHHHHHHHHcCCCCcccCCCCCCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHHH
Q 010896 86 KRIVITGMGLVSVFGSDIDKFYNKLLEGESGISPIDRFDASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGR 165 (498)
Q Consensus 86 ~~V~ItG~g~~~p~g~~~~~~~~~L~~g~~~i~~~~~~~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa~ 165 (498)
+||||||||+++|+|.++++||++|++|+++|+++++|+.+.+...+...++.+...+.+++++.+.||+.++|++.+++
T Consensus 1 rRVvItG~G~v~p~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~ 80 (216)
T d1tqya1 1 RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEADFDPVAEGFGPRELDRMDRASQFAVACAR 80 (216)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEEECCCCCHHHHTCCHHHHHHSCHHHHHHHHHHH
T ss_pred CeEEEEeceeECCCCCCHHHHHHHHHcCCCEeecCCccCCCcccccccccccccccccccChhhhcccCcchhhHHHHHH
Confidence 58999999999999999999999999999999999999987776565555543333355899999999999999999999
Q ss_pred HHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcC------CCcCCccccchhhhhhHHHHHHhhcCC
Q 010896 166 RALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGY------KKITPFFIPYSITNMGSALLAIDTGLM 239 (498)
Q Consensus 166 ~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~n~~a~~ia~~lgl~ 239 (498)
+||+|||+ .++.+...++|+++|++.++.......+..+..... ....++.++..++|.++.++++.||++
T Consensus 81 ~Al~dAg~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g~~ 157 (216)
T d1tqya1 81 EAFAASGL---DPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAE 157 (216)
T ss_dssp HHHHHHTC---CTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHHHHHHTCC
T ss_pred HHHHHhcC---CccccccccccccccccccccchhhHHHhhhhhcccccccchhhcccccccccCchHHHHHHHHhcCcc
Confidence 99999999 455677789999999999999988888887766543 356677788888999999999999999
Q ss_pred CCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccC
Q 010896 240 GPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQR 297 (498)
Q Consensus 240 Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~ 297 (498)
||+++++++|+|++.||.+|+++|++|+||+|||||+|..++|..+.+|.++++||.+
T Consensus 158 Gp~~tv~~ACaS~~~Ai~~A~~~i~~G~~d~~ivGG~d~~l~p~~~~~F~~~~alS~~ 215 (216)
T d1tqya1 158 GPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTAR 215 (216)
T ss_dssp SCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC
T ss_pred ccceeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHCCCCCcC
Confidence 9999999999999999999999999999999999999999999999999999999963
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.2e-36 Score=265.33 Aligned_cols=151 Identities=34% Similarity=0.602 Sum_probs=138.4
Q ss_pred EEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcCCCccccccc
Q 010896 340 IAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGT 419 (498)
Q Consensus 340 ~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~v~s~ 419 (498)
|++|+|++.++||++++.| ++.++.++|+++|+++ ++||||||+|||||+++|.+|..+|+++|++ ..++|++.
T Consensus 1 Yaei~G~g~~~Dg~~~taP--~~~~~~~~~~~al~~a---~~~I~~v~aHgtGT~~gD~~E~~Al~~vfg~-~~~~v~s~ 74 (151)
T d2vbaa2 1 YAEIVGYGATSDGADMVAP--SGEGAVRCMKMAMHGV---DTPIDYLNSHGTSTPVGDVKELAAIREVFGD-KSPAISAT 74 (151)
T ss_dssp CEEEEEEEEEECCSCTTSC--CSHHHHHHHHHHHTTC---CSCCCEEECCCCSCHHHHHHHHHHHHHHHTT-CCCEEECT
T ss_pred CEEEEEEEEecCCCCCCCc--CHHHHHHHHHHhhhcC---cccceeEEEeccCCccccHHHHHHHHHHhCC-CCcccccc
Confidence 7999999999999987765 5777899999999865 6799999999999999999999999999986 46789999
Q ss_pred ccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEeeC
Q 010896 420 KSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 420 K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
|+++||+++|||++++++++++|++++|||++|++++++++....++......+++++++|||||||+|+|+||+|.
T Consensus 75 K~~~GH~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~nsfGfGG~Na~~vl~~v 151 (151)
T d2vbaa2 75 KAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRKL 151 (151)
T ss_dssp HHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCTTSEECCSCEECCCCEEEEEEEETTTEEEEEEEECC
T ss_pred hhhccccccchhhhhhhHHHHHHHcCCcccccCccccccccccccccCcCcCCCCCEEEEeCCcccceeEEEEEEEC
Confidence 99999999999999999999999999999999999999988766666666677889999999999999999999973
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.51 E-value=1.3e-13 Score=137.77 Aligned_cols=326 Identities=13% Similarity=0.091 Sum_probs=181.0
Q ss_pred CCcEEEEeeceecCCC-CCHHHHHHHHHcCCCCcccCCC----CCCCCCCcccccccCCCCCC----CCCCccccccC--
Q 010896 85 KKRIVITGMGLVSVFG-SDIDKFYNKLLEGESGISPIDR----FDASSFSVRFGGQIRDFSSK----GYIDGKNDRRL-- 153 (498)
Q Consensus 85 ~~~V~ItG~g~~~p~g-~~~~~~~~~L~~g~~~i~~~~~----~~~~~~~~~~~g~i~~~d~~----~~i~~~~~~~~-- 153 (498)
....+|+|+|...|.- .+-+++++.+.+-...-....+ +...+...|+.. .+..+.. ..-++...+++
T Consensus 9 ~~~a~I~g~g~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~ri~~~tGI~~R~~~-~~~~~~~~~~~~~~~~~~~~r~~~ 87 (372)
T d1teda_ 9 TTVAVIEGLATGTPRRVVNQSDAADRVAELFLDPGQRERIPRVYQKSRITTRRMA-VDPLDAKFDVFRREPATIRDRMHL 87 (372)
T ss_dssp CCEEEEEEEEEECCSCEEEHHHHHHHHHTC----CCTTHHHHHHHTSCCSEEECS-SCTTSTTHHHHTTCSSCHHHHHHH
T ss_pred CceEEEEEEEEeCCCeEEcHHHHHHHHHhhcCChHHHHHHHHHHHccCCccccee-ccccccchhhhhhcCCCHHHHHHH
Confidence 3346899999999975 5678888877532110000000 011111111110 0011100 00111111111
Q ss_pred --CHHHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHH
Q 010896 154 --DDCWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSAL 231 (498)
Q Consensus 154 --d~~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ 231 (498)
.....|+.+|+++||+++|+++ +++| -++++++. +...+..+.+
T Consensus 88 ~~e~~~~la~~Aa~~aL~~ag~~~---~dId----~lI~~t~t---------------------------~~~~P~~a~~ 133 (372)
T d1teda_ 88 FYEHAVPLAVDVSKRALAGLPYRA---AEIG----LLVLATST---------------------------GFIAPGVDVA 133 (372)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCG---GGEE----EEEEEESS---------------------------CCCSSCHHHH
T ss_pred HHhHHHHHHHHHHHHHHHHcCCCH---HHCC----EEEEeccC---------------------------CCCCchHHHH
Confidence 2345799999999999999944 3443 24444421 1122456788
Q ss_pred HHHhhcCCCCcc--ccc-cccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcC
Q 010896 232 LAIDTGLMGPNY--SIS-TACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPW 308 (498)
Q Consensus 232 ia~~lgl~Gp~~--tv~-~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpf 308 (498)
|+..||++.... .+. .+|++++.||..|..+|++|..+.+||.++|..... +.. .+ .+
T Consensus 134 v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~l~sg~~~~~LVV~~E~~s~~-----------~~~----~d---~~- 194 (372)
T d1teda_ 134 IVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVN-----------AVF----AD---DI- 194 (372)
T ss_dssp HHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEECGGG-----------CCC----CS---SH-
T ss_pred HHhhhccCCceeEeeccccCccHHHHHHHHHHHHHhcCCCccceeeeehhhccc-----------ccC----CC---cc-
Confidence 999999986443 233 489999999999999999999999999999952110 000 00 00
Q ss_pred CCCCCCccccceeEEEEEcchHHHHhcCCcEEEEEEeEEEe-cCC-CC----------CC-CCCC-----ChHHHHHHHH
Q 010896 309 DKDRDGFVMGEGCGILVMESLEHAMKRGANIIAEYLGGAVT-CDA-HH----------MT-DPRS-----DGLGVSSCIA 370 (498)
Q Consensus 309 d~~~~G~v~gEGaaavvLe~~~~A~~~g~~i~a~I~g~~~~-~dg-~~----------~~-~p~~-----~~~~~~~~i~ 370 (498)
+.....+++||||+|+||++.+...... .....+.+.... ... .. .. .... ..+.+.++++
T Consensus 195 ~~~~~~~lfGDGAaA~ll~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 273 (372)
T d1teda_ 195 NDVVIHSLFGDGCAALVIGASQVQEKLE-PGKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVT 273 (372)
T ss_dssp HHHHHHHHBCEEEEEEEEEEECTTSCCC-TTCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhcccceeEEeccCCcccccC-CceeEEecccccccCCCccccccCCCCCcceeechHHHHHHHHHHHHHHHH
Confidence 0001235789999999998654321111 112233333221 110 00 00 0001 1345678899
Q ss_pred HHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccc-cccccccCCcchhhhHHHHHHHHHHhhcCccC
Q 010896 371 KSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKM-NGTKSMIGHGLGAAGGLEAITTIKAITTGWLH 448 (498)
Q Consensus 371 ~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v-~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ip 448 (498)
++|+++|++++|||++..|-.+....| .+.+.++- ...+.. ..+-..+||+.+|+=.+.|- ..++++.+.
T Consensus 274 ~~L~~~gl~~~did~~i~Hq~~~~i~~-----~i~~~Lgl~~ek~~~s~~~l~~~GN~~sasip~~L~---~~l~~g~~~ 345 (372)
T d1teda_ 274 EMLWDNGLQISDIDLWAIHPGGPKIIE-----QSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLE---TMVQQAESA 345 (372)
T ss_dssp HHHHHTTCCGGGCSCEEECCSCHHHHH-----HHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHH---HHHHSCSSS
T ss_pred HHHHhcCCCHHHhhhhhccCccHHHHH-----HHHHHcCCCHHHhhhhHHHHhccCCcHHHHHHHHHH---HHHHhCCCC
Confidence 999999999999999999977655433 34444542 122221 12234569987766333332 234443321
Q ss_pred CCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEeeC
Q 010896 449 PTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 449 p~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
.+.+++++.+||.|=+-..+||+..
T Consensus 346 -----------------------~g~d~vll~~fG~G~s~~~~ll~~~ 370 (372)
T d1teda_ 346 -----------------------KAISTGVAFAFGPGVTVEGMLFDII 370 (372)
T ss_dssp -----------------------SSSEEEEEEEEETTTEEEEEEEEEC
T ss_pred -----------------------CCCCEEEEEEEcHHHhHHHHhheee
Confidence 1235677789998767778888764
|
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=99.41 E-value=5.6e-13 Score=126.25 Aligned_cols=89 Identities=17% Similarity=0.246 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhc
Q 010896 158 RYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTG 237 (498)
Q Consensus 158 ~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lg 237 (498)
.|+..+..++|+++|+ +++.+| .|++|...... -...++-+++...|
T Consensus 29 dL~~~~~~~~l~~~~i---~~~~Id----~vi~G~~~~~~--------------------------~~~n~ar~~al~ag 75 (268)
T d1m3ka1 29 ELGATVISAVLERAGV---AAGEVN----EVILGQVLPAG--------------------------EGQNPARQAAMKAG 75 (268)
T ss_dssp HHHHHHHHHHHHHHTC---CGGGCC----EEEEECSCCTT--------------------------SCSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCC---CHHHCc----EEEEeeccccC--------------------------cchHHHhHHHHHhC
Confidence 7999999999999999 445666 58888643110 11123445566666
Q ss_pred CC--CCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccc
Q 010896 238 LM--GPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAA 279 (498)
Q Consensus 238 l~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~ 279 (498)
+. =|.++|+..|+||+.||.+|++.|++|++|++|+||+|.+
T Consensus 76 lp~~vpa~tv~~~C~Sg~~Ai~~Aa~~I~~G~~dvvlagG~Esm 119 (268)
T d1m3ka1 76 VPQEATAWGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESM 119 (268)
T ss_dssp CCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEES
T ss_pred CcccccceeecccCcccchHHHHHHHHHhCCCceEEeecccccc
Confidence 64 2789999999999999999999999999999999999985
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=99.32 E-value=9.1e-12 Score=118.34 Aligned_cols=90 Identities=14% Similarity=0.166 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhc
Q 010896 158 RYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTG 237 (498)
Q Consensus 158 ~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lg 237 (498)
.|+..+++++|+++|+ +++.+| .|++|...... .-...++..++...|
T Consensus 26 dL~~~a~~~al~~~~i---~~~~Id----~vi~G~v~~~g-------------------------~~~~n~aR~~al~aG 73 (273)
T d1ulqa1 26 DLLAHALSVLVDRSGV---PKEEVE----DVYAGCANQAG-------------------------EDNRNVARMALLLAG 73 (273)
T ss_dssp HHHHHHHHHHHHHHTC---CGGGCC----EEEEECSCCSS-------------------------TTTTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCC---CHHHCC----EEEEEeccccc-------------------------cccccHHHHHHHHcC
Confidence 6899999999999999 455666 68888643211 011124445555666
Q ss_pred CC--CCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccc
Q 010896 238 LM--GPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAA 279 (498)
Q Consensus 238 l~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~ 279 (498)
+- =|.++|+..|+||+.||..|++.|++|+.|++|+||+|.+
T Consensus 74 lp~~vp~~tVn~~CaSg~~Ai~~a~~~I~~G~~d~~lagG~Esm 117 (273)
T d1ulqa1 74 FPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESM 117 (273)
T ss_dssp CCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEES
T ss_pred CCCccceEEEecccchHHHHHHHHHHHHhcCCCccceeeecccc
Confidence 63 2889999999999999999999999999999999999974
|
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=99.32 E-value=5.3e-12 Score=118.93 Aligned_cols=91 Identities=20% Similarity=0.251 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHH-CCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 157 WRYCLVAGRRALEE-ASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 157 ~~l~l~aa~~AL~d-AG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
..|+..+.+++|+. +|+++ +.+| .|++|....... ....++..++..
T Consensus 31 ~dL~~~~i~~~l~r~agi~~---~~Id----~vi~G~v~~~~~-------------------------~g~n~aR~~al~ 78 (262)
T d1wdkc1 31 EDMSAHLISKVLERNSKVDP---GEVE----DVIWGCVNQTLE-------------------------QGWNIARMASLM 78 (262)
T ss_dssp HHHHHHHHHHHHHHCTTSCG---GGEE----EEEEECSSBSBT-------------------------TTTTHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCCCCH---HHee----EEEEEeeccccc-------------------------ccccchhhhHhh
Confidence 37889999999995 99944 4555 588886432110 011233444444
Q ss_pred hcCC--CCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccc
Q 010896 236 TGLM--GPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAA 279 (498)
Q Consensus 236 lgl~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~ 279 (498)
.|+- =|.++|+..|+||+.||..|++.|++|++|++|+||+|.+
T Consensus 79 ag~p~~vp~~tV~~~C~Sgl~Ai~~aa~~I~sG~~dvvlAgGvEsm 124 (262)
T d1wdkc1 79 TQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM 124 (262)
T ss_dssp SSSCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEET
T ss_pred hhcccccchhhccccccHHHHHHHHHHHHHHhhcCCceeeeccccc
Confidence 4543 2789999999999999999999999999999999999974
|
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.27 E-value=1.5e-11 Score=116.21 Aligned_cols=89 Identities=17% Similarity=0.207 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHC----CCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHH
Q 010896 158 RYCLVAGRRALEEA----SLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLA 233 (498)
Q Consensus 158 ~l~l~aa~~AL~dA----G~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia 233 (498)
.|+..+.+++|+.+ |++ ++.+| .|++|..... .....++.+++
T Consensus 37 ~L~~~~i~~~l~r~~~~~~id---p~~Id----~vi~G~v~~~--------------------------g~~~~~aR~~a 83 (269)
T d1afwa1 37 YLLYNFLNEFIGRFPEPLRAD---LNLIE----EVACGNVLNV--------------------------GAGATEHRAAC 83 (269)
T ss_dssp HHHHHHHHHHHHTSCHHHHTC---GGGCC----CEEEECSSSB--------------------------GGGHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCccccCC---hhhcC----EEEecccccc--------------------------ccccccchhhh
Confidence 67888889999754 673 44555 4888864211 11122345555
Q ss_pred HhhcC--CCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccc
Q 010896 234 IDTGL--MGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAA 279 (498)
Q Consensus 234 ~~lgl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~ 279 (498)
..-|+ .-|.++|+..|+||+.||..|++.|++|+.|++|+||+|.+
T Consensus 84 l~aglp~~vpa~tVnr~CaSg~~Ai~~Aa~~I~~G~~divlagG~Esm 131 (269)
T d1afwa1 84 LASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESM 131 (269)
T ss_dssp HHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEH
T ss_pred hhccccccccchhccccchHHHHHHHHHHHHHhhccccceeeeecccc
Confidence 55665 34999999999999999999999999999999999999984
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.14 E-value=4.8e-11 Score=97.50 Aligned_cols=119 Identities=17% Similarity=0.323 Sum_probs=95.5
Q ss_pred CCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHH--HHHHhc-CCC
Q 010896 336 GANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNA--IKKVFK-DTS 412 (498)
Q Consensus 336 g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~a--l~~~f~-~~~ 412 (498)
|.+|+|+|.+++... ..|...+.+...+++++|+++|++.+|||+||.| +.+-.+. ..+.++ +..
T Consensus 2 gl~plAri~~~a~~g-----~~P~~m~~gPv~Ai~klL~r~gl~~~Did~~Ein-------EAFA~q~l~~~~~l~id~~ 69 (124)
T d1afwa2 2 NLPVLGRYIDFQTVG-----VPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEIN-------EAFAAQALYCIHKLGIDLN 69 (124)
T ss_dssp TCCCCEEEEEEEEEE-----CCGGGGGGHHHHHHHHHHHHHTCCGGGCSEEEEC-------CSBHHHHHHHHHHHTCCGG
T ss_pred CCcEEEEEEEEEEEe-----cCHHHhhhChHHHHHHHHHHcCCCcccCcEEEec-------cchhHHHHHHHHHcCCChh
Confidence 678999999999876 3566667788999999999999999999999999 3333333 334444 246
Q ss_pred cccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEE
Q 010896 413 EMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVV 492 (498)
Q Consensus 413 ~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~v 492 (498)
.+++++..-.+|||.||||+..++..+..|+++ ++++++...-||.-.++|
T Consensus 70 kvN~~GGaiAlGHP~GaSGarlv~~l~~~L~~~-----------------------------~~glas~C~ggG~G~a~~ 120 (124)
T d1afwa2 70 KVNPRGGAIALGHPLGCTGARQVATILRELKKD-----------------------------QIGVVSMCIGTGMGAAAI 120 (124)
T ss_dssp GBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCTT-----------------------------CEEEEEEEETTTEEEEEE
T ss_pred hccccCccceecCCcCCchHHHHHHHHHHhccC-----------------------------CEEEEEEcccCCcEEEEE
Confidence 789999999999999999999999999888541 456777777788888888
Q ss_pred Eee
Q 010896 493 FAP 495 (498)
Q Consensus 493 l~~ 495 (498)
+++
T Consensus 121 ier 123 (124)
T d1afwa2 121 FIK 123 (124)
T ss_dssp EEE
T ss_pred EEe
Confidence 876
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=99.13 E-value=6.6e-11 Score=96.70 Aligned_cols=120 Identities=23% Similarity=0.309 Sum_probs=96.7
Q ss_pred cEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHH--HHHhc---CCC
Q 010896 338 NIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAI--KKVFK---DTS 412 (498)
Q Consensus 338 ~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al--~~~f~---~~~ 412 (498)
+|+|+|.+++... ..|...+.+...+++++|+++|++++|||++|.| +.+-.+.+ .+.++ +..
T Consensus 1 KPlA~i~~~~~~g-----~~P~~~~~~P~~A~~~~L~r~gl~~~Did~~Ein-------EAFAaq~l~~~~~~~l~~d~~ 68 (125)
T d1ulqa2 1 RPLARVRAIAVAG-----VPPRIMGIGPVPATRKALERAGLSFSDLGLIELN-------EAFAAQALAVLREWSLSMEDQ 68 (125)
T ss_dssp CCSEEEEEEEEEE-----CCGGGGGGTHHHHHHHHHHHTTCCGGGCSEEEEC-------CSBHHHHHHHHHHHTCCTTCT
T ss_pred CCeEEEEEEEEEe-----cCHHHHhhccHHHHHhHhhccCcCccccchheec-------cccchhHHHHHHHhhccCchh
Confidence 4689999998876 3455556677899999999999999999999999 44444444 33332 245
Q ss_pred cccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEE
Q 010896 413 EMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVV 492 (498)
Q Consensus 413 ~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~v 492 (498)
.+++++..-.+|||.||||+..++..+..|++. +.++.+++...-||...+++
T Consensus 69 kvN~~GGaIAlGHP~GASGari~~tl~~~L~~~---------------------------~~~~G~as~C~gGG~g~A~~ 121 (125)
T d1ulqa2 69 RLNPNGGAIALGHPLGASGARILTTLVHEMRRR---------------------------KVQFGLATMCIGVGQGIAVV 121 (125)
T ss_dssp TBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT---------------------------TCSEEEEEEEETTTEEEEEE
T ss_pred hcCCCCCcccccCCccccchhHHHHHHHHHHhc---------------------------CCCEEEEEecccccceeEEE
Confidence 789999999999999999999999999999762 34688888888999999999
Q ss_pred EeeC
Q 010896 493 FAPF 496 (498)
Q Consensus 493 l~~~ 496 (498)
+|+.
T Consensus 122 iE~i 125 (125)
T d1ulqa2 122 VEGM 125 (125)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 9873
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=99.13 E-value=3.8e-11 Score=98.71 Aligned_cols=121 Identities=21% Similarity=0.301 Sum_probs=97.8
Q ss_pred CCcEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHH--HHhcC---
Q 010896 336 GANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIK--KVFKD--- 410 (498)
Q Consensus 336 g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~--~~f~~--- 410 (498)
|.+|+++|++++... ..|...+.+...+++++|+++|++.+|||++|.| +.+-.+++. +.++.
T Consensus 1 Gl~pla~i~~~~~~g-----~dP~~mg~~p~~A~~klL~ragl~~~did~~Ein-------EAFA~q~l~~~~~~~~~~~ 68 (128)
T d1wdkc2 1 GLEPLAVIRSMAVAG-----VDPAIMGYGPVPATQKALKRAGLNMADIDFIELN-------EAFAAQALPVLKDLKVLDK 68 (128)
T ss_dssp TCCCSEEEEEEEEEE-----CCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEEC-------CSBHHHHHHHHHHTTCGGG
T ss_pred CCCEEEEEEEEEEEe-----cCHHHhccCcHHHHHHHhhhcCccccccceEEee-------cccchhhhhhhhhcccccC
Confidence 567899999998876 3455566777899999999999999999999999 444444432 22221
Q ss_pred -CCcccccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEcccccccee
Q 010896 411 -TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNS 489 (498)
Q Consensus 411 -~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~ 489 (498)
..++++++..-.+|||.||||+..++..+..|++. +.++.+++...-||...
T Consensus 69 ~~ekvN~~GGaiAlGHP~GASGaRlv~~l~~~L~~~---------------------------~~~~Glas~C~gGG~g~ 121 (128)
T d1wdkc2 69 MNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQN---------------------------GGTFGLSTMCIGLGQGI 121 (128)
T ss_dssp HHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT---------------------------TCSEEEEEEEETTTEEE
T ss_pred CcceecCCCCcccccccccccchhHHHHHHHHHHhc---------------------------CCCEEEEEeccccccee
Confidence 24688999999999999999999999999999762 34688888888999999
Q ss_pred eEEEee
Q 010896 490 VVVFAP 495 (498)
Q Consensus 490 ~~vl~~ 495 (498)
++++|+
T Consensus 122 A~~iEr 127 (128)
T d1wdkc2 122 ATVFER 127 (128)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 999986
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=99.09 E-value=9.3e-11 Score=103.61 Aligned_cols=119 Identities=20% Similarity=0.352 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+.+|+++||+++|++ ++++| -+++++.. +....+..+..|...
T Consensus 51 ~~~la~~Aa~~al~~a~~~---~~~Id----~li~~s~~--------------------------~~~~~P~~a~~v~~~ 97 (174)
T d1hnja1 51 VSTMGFEAATRAIEMAGIE---KDQIG----LIVVATTS--------------------------ATHAFPSAACQIQSM 97 (174)
T ss_dssp HHHHHHHHHHHHHHHHTCC---GGGCC----EEEEECSC--------------------------CSCSSSCHHHHHHHH
T ss_pred chHHHHHHHHHhhhhcccc---ccccc----EEEEecCC--------------------------ccccccchhhhhhhc
Confidence 4589999999999999994 44555 46666532 223345678889999
Q ss_pred hcCCC-CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCC
Q 010896 236 TGLMG-PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDG 314 (498)
Q Consensus 236 lgl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G 314 (498)
||++. +++.+..+|++++.||..|..+|++|.++.+|+.+.|.. ++. +. + ......
T Consensus 98 Lgl~~~~~~di~~~C~g~~~al~~A~~~i~sg~~~~~Lvv~~e~~-S~~----------~~-----------~-~d~~~~ 154 (174)
T d1hnja1 98 LGIKGCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVL-ART----------CD-----------P-TDRGTI 154 (174)
T ss_dssp HTCCSSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECH-HHH----------SC-----------T-TCHHHH
T ss_pred cCCCchhhhhhhhhhccHHHHHHHHHHHHhcCCcceeEEEeeehh-hcc----------cC-----------C-CCCCeE
Confidence 99986 688899999999999999999999999999999999962 111 11 0 111224
Q ss_pred ccccceeEEEEEcchH
Q 010896 315 FVMGEGCGILVMESLE 330 (498)
Q Consensus 315 ~v~gEGaaavvLe~~~ 330 (498)
+++||||+|+||++.+
T Consensus 155 ~lfGDgA~A~vl~~~~ 170 (174)
T d1hnja1 155 IIFGDGAGAAVLAASE 170 (174)
T ss_dssp TTBCCEEEEEEEEEES
T ss_pred EEeceeeEEEEEEeCC
Confidence 6789999999999744
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=99.09 E-value=2.9e-10 Score=101.03 Aligned_cols=118 Identities=25% Similarity=0.295 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+.+|+++||+++|++ ++++| .+++++.. +.......+..+...
T Consensus 58 ~~~ma~~Aa~~aL~~a~~~---~~dId----~li~~s~~--------------------------~~~~~p~~a~~v~~~ 104 (181)
T d1mzja1 58 IQVMGVAASRRALEHAGVD---PAEID----LVVVSTMT--------------------------NFVHTPPLSVAIAHE 104 (181)
T ss_dssp HHHHHHHHHHHHHHHHTCC---GGGCC----EEEEECSC--------------------------CCCCSSCHHHHHHHH
T ss_pred HHHHhHHHHHhhhhhccCC---hhHCe----EEEEeccC--------------------------CccccccHHHHHHHh
Confidence 4589999999999999994 44555 45666532 223334567788888
Q ss_pred hcCCC-CccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCC
Q 010896 236 TGLMG-PNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDG 314 (498)
Q Consensus 236 lgl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G 314 (498)
++.+. .++.+..+|++++.||..|..+|++|..+.+|+.+.|.. ++. + .++.....
T Consensus 105 l~~~~~~~~Dv~~~C~g~~~aL~~A~~~i~~~~~~~~LvV~~e~~-s~~----------~------------~~~d~~~~ 161 (181)
T d1mzja1 105 LGADNAGGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATERM-TDV----------I------------DLADRSLS 161 (181)
T ss_dssp HTCTTCEEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEG-GGG----------S------------CSSCTTTT
T ss_pred hcCCCccceeHHhhhccHHHHHHHHhCHhhcCCCceeEEeeeccc-ccc----------C------------CCCCcceE
Confidence 88864 688899999999999999999999999999999999962 111 1 11222446
Q ss_pred ccccceeEEEEEcch
Q 010896 315 FVMGEGCGILVMESL 329 (498)
Q Consensus 315 ~v~gEGaaavvLe~~ 329 (498)
+++||||+|+||++.
T Consensus 162 ~lfGDGAaA~ll~~~ 176 (181)
T d1mzja1 162 FLFGDGAGAAVVGPS 176 (181)
T ss_dssp TTBCEEEEEEEEEEE
T ss_pred EEeeeeeEEEEEEeC
Confidence 789999999999864
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=99.09 E-value=8.9e-11 Score=103.51 Aligned_cols=119 Identities=21% Similarity=0.326 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+.+|+++||+++|+++ +++| -|++++. .+....+..+.+|...
T Consensus 49 ~~~ma~~Aa~~aL~~agi~~---~dId----lli~~s~--------------------------t~~~~~p~~a~~v~~~ 95 (172)
T d1ub7a1 49 TSDLAFKAVEDLLRRHPGAL---EGVD----AVIVATN--------------------------TPDALFPDTAALVQAR 95 (172)
T ss_dssp HHHHHHHHHHHHHHHSTTTT---TTEE----EEEEECS--------------------------SCSEEESCHHHHHHHH
T ss_pred ccHHHHHHHHHHHhhcCccc---ccce----EEEEecc--------------------------cccccccchHHHHHHH
Confidence 45899999999999999943 3443 3444442 1233445667788889
Q ss_pred hcCCCCccccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCc
Q 010896 236 TGLMGPNYSISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGF 315 (498)
Q Consensus 236 lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~ 315 (498)
||.+.+++.|..+|++++.+|..|..+|++|..+.+|+.++|.. +.. + + |+.....+
T Consensus 96 Lg~~~~~~di~~~C~g~~~al~~a~~~~~~~~~~~~Lvv~~e~~-S~~----------~-----------~-~~d~~~~~ 152 (172)
T d1ub7a1 96 FGLKAFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEAL-SKI----------I-----------D-WNDRATAV 152 (172)
T ss_dssp TTCCCEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECG-GGT----------S-----------C-TTCHHHHT
T ss_pred hccCccceeehhccccHHHHHHHHhhhhhcCCcceeEEeccccc-ccc----------c-----------C-CCCcCeEE
Confidence 99888999999999999999999999999999999999999962 110 0 1 12223456
Q ss_pred cccceeEEEEEcchH
Q 010896 316 VMGEGCGILVMESLE 330 (498)
Q Consensus 316 v~gEGaaavvLe~~~ 330 (498)
++||||+|+||++.+
T Consensus 153 lfGDgAaA~ll~~~~ 167 (172)
T d1ub7a1 153 LFGDGGGAAVVGKVR 167 (172)
T ss_dssp TBCCEEEEEEEECCC
T ss_pred EecceeEEEEEEEcC
Confidence 789999999998654
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=99.07 E-value=1e-10 Score=95.40 Aligned_cols=119 Identities=23% Similarity=0.285 Sum_probs=97.3
Q ss_pred cEEEEEEeEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHH--HHHHhc-CCCcc
Q 010896 338 NIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNA--IKKVFK-DTSEM 414 (498)
Q Consensus 338 ~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~a--l~~~f~-~~~~~ 414 (498)
+|+++|.+++... ..|...+.+...+++++|+++|++.+|||++|.| +.+-.+. ..+.++ +...+
T Consensus 2 ~Plari~~~a~~g-----~dP~~mg~~Pv~A~~~lL~r~gl~~~Did~~Ein-------EAFA~q~la~~~~l~id~~kv 69 (124)
T d1m3ka2 2 QPLGRIVSWATVG-----VDPKVMGTGPIPASRKALERAGWKIGDLDLVEAN-------EAFAAQACAVNKDLGWDPSIV 69 (124)
T ss_dssp CCSEEEEEEEEEE-----CCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEEC-------CSBHHHHHHHHHHHCCCGGGB
T ss_pred CcEEEEEEEEEEe-----cChHHhccchHHHHHHHHHHcCCChhcccHHHhc-------ccchhheeeehHhhCCChhhc
Confidence 5789999998876 4566667777899999999999999999999999 4333333 344454 24678
Q ss_pred cccccccccCCcchhhhHHHHHHHHHHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEe
Q 010896 415 KMNGTKSMIGHGLGAAGGLEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494 (498)
Q Consensus 415 ~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~ 494 (498)
++++..-.+||+.||||+..+...+..|++. +.++.+++...-||...++++|
T Consensus 70 N~~GGaiAlGHP~GaSGarl~~tl~~~L~~~---------------------------~~~~Glas~C~gGG~g~A~liE 122 (124)
T d1m3ka2 70 NVNGGAIAIGHPIGASGARILNTLLFEMKRR---------------------------GARKGLATLCIGGGMGVAMCIE 122 (124)
T ss_dssp STTCCHHHHCCCTTTHHHHHHHHHHHHHHHH---------------------------TCSEEEEEEEETTTEEEEEEEE
T ss_pred CCCCCccccccCcCccchhHHHHHHHHHHhc---------------------------CCCEEEEEecccccceeEEEEE
Confidence 9999999999999999999999999999761 3468888888899999999998
Q ss_pred e
Q 010896 495 P 495 (498)
Q Consensus 495 ~ 495 (498)
+
T Consensus 123 ~ 123 (124)
T d1m3ka2 123 S 123 (124)
T ss_dssp C
T ss_pred e
Confidence 6
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.79 E-value=7.3e-09 Score=93.21 Aligned_cols=117 Identities=19% Similarity=0.179 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+..|+++||+++|++ ++++| -++++++.+ + ..+..+..+...
T Consensus 75 a~~la~~Aa~~aL~~ag~~---~~dId----~lI~~s~t~----------------------~-----~~P~~aa~v~~~ 120 (200)
T d1u0ma1 75 AKSRVPAVIQRALDDAELL---ATDID----VIIYVSCTG----------------------F-----MMPSLTAWLINE 120 (200)
T ss_dssp HHHHHHHHHHHHHHHHTCC---GGGCS----EEEEECSSS----------------------C-----CSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCC---hhhhh----eEEEeccCC----------------------C-----CcchhHHHHHHH
Confidence 4579999999999999994 44555 355554311 1 123467788889
Q ss_pred hcCCCCc--ccc-ccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCC
Q 010896 236 TGLMGPN--YSI-STACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDR 312 (498)
Q Consensus 236 lgl~Gp~--~tv-~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~ 312 (498)
++++... +.+ ..+|++++.+|..|..+|++|..+.+||.+.|... . ..+|-|.+.
T Consensus 121 lg~~~~~~~~~i~~~gC~g~~~al~~A~~~l~~~~~~~vLvv~~e~~S-~---------------------~~~~~d~~~ 178 (200)
T d1u0ma1 121 MGFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCS-L---------------------CYQPTDLGV 178 (200)
T ss_dssp TTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEGG-G---------------------GCCTTCCSH
T ss_pred HhcCCCeeEeccccchhhHHHHHHHHHHHHHHhCCCCEEEEEEEeccc-c---------------------ccCCCCCCh
Confidence 9987643 444 47999999999999999999999999999999621 1 011212111
Q ss_pred ----CCccccceeEEEEEcc
Q 010896 313 ----DGFVMGEGCGILVMES 328 (498)
Q Consensus 313 ----~G~v~gEGaaavvLe~ 328 (498)
...++||||+|+||..
T Consensus 179 ~~~~~~~lFgDGAaA~ll~~ 198 (200)
T d1u0ma1 179 GSLLCNGLFGDGIAAAVVRG 198 (200)
T ss_dssp HHHHHHHHBCEEEEEEEEET
T ss_pred hhhhcccccccccEEEEEec
Confidence 1246899999999974
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=98.65 E-value=8.7e-08 Score=88.12 Aligned_cols=89 Identities=15% Similarity=0.111 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHh
Q 010896 156 CWRYCLVAGRRALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAID 235 (498)
Q Consensus 156 ~~~l~l~aa~~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~ 235 (498)
...|+..|+++||+++|+ +++++| .++++++.+ ...+. .+..+...
T Consensus 102 ~~~la~~Aa~~aL~~a~~---~~~dId----~lI~~t~t~--------------------------~~~p~-~~a~~~~~ 147 (235)
T d1bi5a1 102 VPRLGKEAAVKAIKEWGQ---PKSKIT----HLIVCTTSG--------------------------VDMPG-ADYQLTKL 147 (235)
T ss_dssp HHHHHHHHHHHHHHHHCS---CGGGCC----EEEEEESSC--------------------------CCSSC-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCC---ChhHCc----EEEEecccC--------------------------CccCc-cHHHHHHH
Confidence 447999999999999999 445555 466665422 11222 24455566
Q ss_pred hcCCCCc--c-ccccccchHHHHHHHHHHHHHcCCCcEEEEecccc
Q 010896 236 TGLMGPN--Y-SISTACATANYCFYAAANHIRRGETDIMVAGGTEA 278 (498)
Q Consensus 236 lgl~Gp~--~-tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~ 278 (498)
+++.... + .+..+|++++.+|..|..+|++|..+.+||.++|.
T Consensus 148 l~~~~~~~~~~~~~~~C~g~~~al~~A~~~i~~~~~~~vLvV~~E~ 193 (235)
T d1bi5a1 148 LGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEV 193 (235)
T ss_dssp HTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEEC
T ss_pred HhcCCCceEEeeecCccchHHHHHHHHHHHHHcCCCCeEEEEEeee
Confidence 6665443 3 34678999999999999999999999999999996
|
| >d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=98.63 E-value=1.7e-08 Score=88.03 Aligned_cols=159 Identities=13% Similarity=0.122 Sum_probs=101.0
Q ss_pred EEEEeeceecCCC-CCHHHHHHHHHcCCCCcccCCCC-CCCCCCcccccccCCCCCCCCCCccccccCCHHHHHHHHHHH
Q 010896 88 IVITGMGLVSVFG-SDIDKFYNKLLEGESGISPIDRF-DASSFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGR 165 (498)
Q Consensus 88 V~ItG~g~~~p~g-~~~~~~~~~L~~g~~~i~~~~~~-~~~~~~~~~~g~i~~~d~~~~i~~~~~~~~d~~~~l~l~aa~ 165 (498)
|-|.|+|..+|.- .+.+++-+.+ |.+ + +++ +..+. ....+..+.| ....|++.|++
T Consensus 2 VgI~~~~~ylP~~~v~~~e~~~~~--g~~---~-~~i~~~~Gi-----------~~r~~~~~~E-----~~~~ma~~Aa~ 59 (166)
T d1xpma1 2 IGIDKINFYVPKYYVDMAKLAEAR--QVD---P-NKFLIGIGQ-----------TEMAVSPVNQ-----DIVSMGANAAK 59 (166)
T ss_dssp EEEEEEEEECCSEEEEHHHHHHHT--TSC---H-HHHHTTTCC-----------SEEEECCTTC-----CHHHHHHHHHH
T ss_pred eeEeEEEEECCCeEEcHHHHHHHh--CCC---H-HHHHHhcCc-----------EEEEeCCCcc-----CHHHHHHHHHH
Confidence 7899999999987 4666655432 211 0 000 00000 0001112222 23468899998
Q ss_pred HHHHHCCCCcccccccCCceeEEEEeccCCCchhhHHHHHHHHHhcCCCcCCccccchhhhhhHHHHHHhhcCCC--Ccc
Q 010896 166 RALEEASLSPQVLENMDRTRIGVVVGSGMGGLTSFTTGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMG--PNY 243 (498)
Q Consensus 166 ~AL~dAG~~~~~~~~~~~~~~gv~vGs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~lgl~G--p~~ 243 (498)
++|++.+. + ++++++..+ ..+.......+..+...+|++. .++
T Consensus 60 ~al~~~~~-----~-----~id~li~~t-------------------------~~~~~~~p~~a~~v~~~lg~~~~~~~~ 104 (166)
T d1xpma1 60 DIITDEDK-----K-----KIGMVIVAT-------------------------ESAVDAAKAAAVQIHNLLGIQPFARCF 104 (166)
T ss_dssp TTCCHHHH-----H-----HEEEEEEEC-------------------------SSCSBSSSCHHHHHHHHTTCCSSCEEE
T ss_pred hhhccccC-----C-----CCCeEEEec-------------------------cccccccchhHHHHHHhhccccceEEe
Confidence 88876532 2 344444332 1122344566788888899865 567
Q ss_pred ccccccchHHHHHHHHHHHHHcCCCcEEEEeccccccchhhHHHHhhccccccCCCCCCCCCCcCCCCCCCccccceeEE
Q 010896 244 SISTACATANYCFYAAANHIRRGETDIMVAGGTEAAIIPTGVGGFIACRALSQRNEYPKRASRPWDKDRDGFVMGEGCGI 323 (498)
Q Consensus 244 tv~~acaS~l~Al~~A~~~I~~G~~d~alvgg~d~~~~p~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGaaa 323 (498)
.+..+|++++.||..|..+|++|..+.+||.+.|... . .++. .+-+.+||||+|
T Consensus 105 dv~~~C~g~~~al~~A~~~i~~~~~~~alvV~sd~~~-~------------------------~~~~-~~~~~fGDGA~A 158 (166)
T d1xpma1 105 EMKEACYAATPAIQLAKDYLATRPNEKVLVIATDTAR-Y------------------------GLNS-GGEPTQGAGAVA 158 (166)
T ss_dssp EEESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEEEC-C------------------------CTTC-SSGGGCEEEEEE
T ss_pred eecccHHHHHHHHHHHhhHHhcCCCCeEEEEEEceEe-c------------------------cCCC-CCCccCCCeeEE
Confidence 8999999999999999999999999999999998411 0 0111 122678999999
Q ss_pred EEEcch
Q 010896 324 LVMESL 329 (498)
Q Consensus 324 vvLe~~ 329 (498)
+||++.
T Consensus 159 ~ll~~~ 164 (166)
T d1xpma1 159 MVIAHN 164 (166)
T ss_dssp EEEEES
T ss_pred EEEecC
Confidence 999863
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.78 E-value=0.0031 Score=52.42 Aligned_cols=98 Identities=16% Similarity=0.206 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHh
Q 010896 364 GVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAI 442 (498)
Q Consensus 364 ~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L 442 (498)
.+.++++++|+++|++++|||++..|-.+... .+++.+.++- ...... ..-..+||+.+|+=.+.|.. ++
T Consensus 49 ~v~~~i~~~L~~~gl~~~dId~~i~Hqa~~~i-----~~~v~~~lgl~~ek~~~-~~~~~~GNt~sasip~~L~~---a~ 119 (148)
T d1u6ea2 49 KMGDVGRRAMDAAGVRPDQIDVFVPHQANSRI-----NELLVKNLQLRPDAVVA-NDIEHTGNTSAASIPLAMAE---LL 119 (148)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEECCSCHHH-----HHHHHHHHTCCTTCEEC-CTHHHHCBCGGGHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHcCCCcccccEEEeccccHHH-----HHHHHHhcCCCchhhhh-hhHHhhCCCccchHHHHHHH---HH
Confidence 45678999999999999999999999665443 4456665653 122222 23456799998886555554 34
Q ss_pred hcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEe
Q 010896 443 TTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494 (498)
Q Consensus 443 ~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~ 494 (498)
+.+.+. +-.++++.+||.|=+-+++|++
T Consensus 120 ~~g~i~------------------------~Gd~vll~gfG~G~s~~a~llr 147 (148)
T d1u6ea2 120 TTGAAK------------------------PGDLALLIGYGAGLSYAAQVVR 147 (148)
T ss_dssp HHTSSC------------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred HcCCCC------------------------CCCEEEEEEEchhhhheEEEEe
Confidence 444431 2356677799987777777775
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=96.49 E-value=0.0076 Score=50.04 Aligned_cols=96 Identities=18% Similarity=0.254 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHhh
Q 010896 365 VSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAIT 443 (498)
Q Consensus 365 ~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~ 443 (498)
+.++|+++|+++|++++|||++..|-.+... .+.+.+.++- ....+ ..-..+||+.+|+=.+.|. ..++
T Consensus 49 vp~~i~~~L~~~g~~~~dId~~i~Hqa~~~~-----~~~i~~~lgi~~~k~~--~~~~~~Gn~~sasip~~L~---~~~~ 118 (149)
T d1ub7a2 49 MNTATLEAIEKAGLTPEDIRLFVPHQANLRI-----IDAARERLGLPWERVA--VNVDRYGNTSTASIPLALK---EAVD 118 (149)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECCSCHHH-----HHHHHHTTTCCGGGBC--CCHHHHCBCGGGHHHHHHH---HHHH
T ss_pred HHHHHHHHHHhhccccccccEEEeeccchHH-----HHHHHhhccchhhHHH--HHHHHhcCCcchhHHHHHH---HHHH
Confidence 4578999999999999999999999655333 3344444442 12222 2234579998887554443 3444
Q ss_pred cCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEe
Q 010896 444 TGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494 (498)
Q Consensus 444 ~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~ 494 (498)
.+.+. +-+.+++.+||.|-+..++|++
T Consensus 119 ~~~~~------------------------~Gd~vll~g~G~G~s~ga~llr 145 (149)
T d1ub7a2 119 AGRIR------------------------EGDHVLLVSFGAGLTWAAAVLT 145 (149)
T ss_dssp HTSSC------------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred cCCCC------------------------CCCEEEEEEEchHhhhEEEEEE
Confidence 44332 2356777899988777777775
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=95.98 E-value=0.021 Score=46.83 Aligned_cols=97 Identities=12% Similarity=0.120 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHh
Q 010896 364 GVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAI 442 (498)
Q Consensus 364 ~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L 442 (498)
.+.++++++|+++|++++|||++-.|-.+...- +.+.+.++- ...++ ..-..+||+.+|+=.+.|-. .+
T Consensus 45 ~~~~~i~~~L~~~g~~~~dId~~i~Hq~~~~~~-----~~~~~~l~l~~~k~~--~~~~~~GN~~sasip~~L~~---~~ 114 (143)
T d1hnja2 45 ELAHIVDETLAANNLDRSQLDWLVPHQANLRII-----SATAKKLGMSMDNVV--VTLDRHGNTSAASVPCALDE---AV 114 (143)
T ss_dssp HHHHHHHHHHHHTTCCGGGCCEEEECCSCHHHH-----HHHHHHTTCCGGGBC--CCHHHHCBCGGGHHHHHHHH---HH
T ss_pred hhhHHHHHHHHHhhhcccccceEEeccCchHHH-----HHHHHhCccchhhhh--hhhhhhcccccchHHHHHHH---HH
Confidence 346789999999999999999999997665443 344555542 12232 23456799998875555444 34
Q ss_pred hcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEe
Q 010896 443 TTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 494 (498)
Q Consensus 443 ~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~ 494 (498)
+.+.+ .+-..++..+||.|=+.++++++
T Consensus 115 ~~~~~------------------------~~Gd~vll~g~G~G~s~g~~llr 142 (143)
T d1hnja2 115 RDGRI------------------------KPGQLVLLEAFGGGFTWGSALVR 142 (143)
T ss_dssp HTTCS------------------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred HhCCC------------------------CCCCEEEEEEEehhhhhEEEEEE
Confidence 44332 12356677889988777777764
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=95.16 E-value=0.048 Score=45.10 Aligned_cols=100 Identities=14% Similarity=0.111 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCcccccccccccCCcchhhhHHHHHHHHHHh
Q 010896 364 GVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIGHGLGAAGGLEAITTIKAI 442 (498)
Q Consensus 364 ~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L 442 (498)
.+.++++++|+++|++++|||++.+|-.+... .+.+.+.++- .... +...-..+||+.+|+=.+.|- ..+
T Consensus 49 ~vp~~i~~~L~~~gl~~~dId~~i~Hq~~~~~-----~~~v~~~lgi~~ek~-~~~~~~~~GNt~Sasip~~L~---~~~ 119 (153)
T d1mzja2 49 DVVPAAREALEVAGLTVGDLVAFVPHQANLRI-----IDVLVDRLGVPEHVV-VSRDAEDTGNTSSASVALALD---RLV 119 (153)
T ss_dssp HHHHHHHHHHHTTTCCGGGCSEEEECCSCHHH-----HHHHHHHHTCCTTSE-ECCTHHHHCBCTTHHHHHHHH---HHH
T ss_pred HHHHHHHHHHHHhCCCcccCCEEEEcCCcHHH-----HHHHHHHhCCCchhc-chhhhhhcCCcccchHHHHHH---HHH
Confidence 45678999999999999999999999665443 3445555552 2222 222334579988775333222 234
Q ss_pred hcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEeeC
Q 010896 443 TTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 443 ~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
+.+.+. +-..+++.+||.|=+.+..+|.-+
T Consensus 120 ~~~~~~------------------------~Gd~ill~~fG~G~s~~~~~l~~~ 149 (153)
T d1mzja2 120 RSGAVP------------------------GGGPALMIGFGAGLSYAGQALLLP 149 (153)
T ss_dssp HHTSSC------------------------TTCEEEEEEEETTTEEEEEEEECC
T ss_pred HcCCCC------------------------CCCEEEEEEEchhhhhhEEEEEec
Confidence 444331 224566778887655556666544
|
| >d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=93.74 E-value=0.076 Score=43.57 Aligned_cols=63 Identities=10% Similarity=0.198 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCccccc-ccccccCCcchhh
Q 010896 363 LGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMN-GTKSMIGHGLGAA 430 (498)
Q Consensus 363 ~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~-s~K~~~Gh~~~Aa 430 (498)
+.+..+++++|+++|++++|||++-.|-.+... .+.+.+.++- ...+..+ .+-..+||+.+|+
T Consensus 43 ~~~~~~i~~~l~~~g~~~~did~~~~Hq~~~~i-----~~~i~~~Lgl~~~k~~~s~~~l~~~GN~~sas 107 (148)
T d1u0ma2 43 EPLAPALKELAGEHGWDASDLDFYIVHAGGPRI-----LDDLSTFLEVDPHAFRFSRATLTEYGNIASAV 107 (148)
T ss_dssp HHHHHHHHHHHHTTSCCSSCCSCCEEECSHHHH-----HHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHH
T ss_pred HHHHHHHHHHHHHhCCCHHHCCEEEECCCCHHH-----HHHHHHHhCCChhhhhHHHHHHHhcCCCCcch
Confidence 557789999999999999999999999555433 3445555642 1222211 2335579998887
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| >d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Pyrone synthase (PyS, chalcone synthase 2) species: Gerbera hybrid cultivar [TaxId: 18101]
Probab=86.53 E-value=2.3 Score=34.64 Aligned_cols=110 Identities=13% Similarity=0.117 Sum_probs=69.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCccccc-ccccccCCcchhhhHHHHHHHH
Q 010896 362 GLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMN-GTKSMIGHGLGAAGGLEAITTI 439 (498)
Q Consensus 362 ~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~-s~K~~~Gh~~~AaG~~~li~a~ 439 (498)
...+...+++.|+++|++.+|||++-+|--|...-| ++.+.++- ...+..+ .+-..+|++-+||=..-|-...
T Consensus 46 ~~~v~~~v~~~l~~~gl~~~di~~~v~Hqgg~~Ild-----~i~~~L~L~~~~l~~s~~vl~~yGNtSSaSI~~vL~~~~ 120 (160)
T d1ee0a2 46 AKNIENAAEKALSPLGITDWNSVFWMVHPGGRAILD-----QVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVR 120 (160)
T ss_dssp HHHHHHHHHHHHGGGTCCCGGGSEEEECCSSHHHHH-----HHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccCCccccceEeecCCcHHHHH-----HHHHHcCCCHHHHHHHHHHHHHhCCCccchHHHHHHHHH
Confidence 456678899999999999999999999966554433 45555542 2233332 3445679988887444443333
Q ss_pred HHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEeeC
Q 010896 440 KAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 440 ~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
. .+...+. ........+++..+||.|=+-..++|++.
T Consensus 121 ~---~~~~~~~-----------------~~~g~~~d~~ll~afG~Glt~~~~llr~~ 157 (160)
T d1ee0a2 121 K---RSMAEGK-----------------STTGEGLDCGVLFGFGPGMTVETVVLRSV 157 (160)
T ss_dssp H---HHHHTTC-----------------SBTBTTBSEEEEEEEETTTEEEEEEEEEC
T ss_pred h---hhhhcCC-----------------CCcCCCcCEEEEEEEChHHHHHHHHHeec
Confidence 2 2111110 00112346778889999888889999875
|
| >d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=85.94 E-value=2.3 Score=34.36 Aligned_cols=110 Identities=15% Similarity=0.086 Sum_probs=68.3
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcC-CCccccc-ccccccCCcchhhhHHHHHHHH
Q 010896 362 GLGVSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMN-GTKSMIGHGLGAAGGLEAITTI 439 (498)
Q Consensus 362 ~~~~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~-~~~~~v~-s~K~~~Gh~~~AaG~~~li~a~ 439 (498)
...+...+++.|+++|++.+|||++-.|--|...-| ++.+.++- ...+..+ .+-...|++-+|+=..-|-...
T Consensus 41 ~~~i~~~~~~~l~~~gl~~~di~~~v~Hqgg~~Ild-----~v~~~L~L~~~~~~~s~~vl~~yGN~SSasi~~vL~~~~ 115 (154)
T d1bi5a2 41 SKNITKALVEAFEPLGISDYNSIFWIAHPGGPAILD-----QVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMR 115 (154)
T ss_dssp HHHHHHHHHHHHGGGTCCCTTSSEEEECCSSHHHHH-----HHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCccccceEeeccccHHHHH-----HHHHHhCCCHHHHHHhHHHHHhcCCCCcccHHHHHHHHH
Confidence 356678899999999999999999999966655434 45555552 2223322 2345678888776333333322
Q ss_pred HHhhcCccCCCCCCCCCCCCCCcCcCCCcccccCccEEEEEccccccceeeEEEeeC
Q 010896 440 KAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 496 (498)
Q Consensus 440 ~~L~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~alv~s~G~gG~n~~~vl~~~ 496 (498)
. ++...+.. ........++..+||.|=+...++|++.
T Consensus 116 ~---~~~~~~~~-----------------~~g~~~~~~~~~aFG~Glt~~~~llr~~ 152 (154)
T d1bi5a2 116 K---KSTQNGLK-----------------TTGEGLEWGVLFGFGPGLTIETVVLRSV 152 (154)
T ss_dssp H---HHHHTTCS-----------------BTTTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred H---hhhccCCc-----------------ccCCCcCEEEEEEEchHHhHHHHHHhcC
Confidence 2 21111110 0112335677889999888889999875
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=83.10 E-value=0.83 Score=38.94 Aligned_cols=76 Identities=17% Similarity=0.040 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEccCCCCccCcHHHHHHHHHHhcCCCcccccccccccCCcchhhhHHHHHHHHHHhhc
Q 010896 365 VSSCIAKSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIGHGLGAAGGLEAITTIKAITT 444 (498)
Q Consensus 365 ~~~~i~~Al~~Agl~~~dId~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~v~s~K~~~Gh~~~AaG~~~li~a~~~L~~ 444 (498)
..++++++|+++|++++|||+|-.. +.|...-+.=...+.+.++-...+.. -.+.+...++++..|-.+.-.|+.
T Consensus 79 a~~Aa~~aL~~ag~~~~dId~lI~~-s~t~~~~P~~aa~v~~~lg~~~~~~~----~~i~~~gC~g~~~al~~A~~~l~~ 153 (200)
T d1u0ma1 79 VPAVIQRALDDAELLATDIDVIIYV-SCTGFMMPSLTAWLINEMGFDSTTRQ----IPIAQLGCAAGGAAINRAHDFCTA 153 (200)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEEE-CSSSCCSSCHHHHHHHHTTCCTTCEE----EEECSCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCChhhhheEEEe-ccCCCCcchhHHHHHHHHhcCCCeeE----eccccchhhHHHHHHHHHHHHHHh
Confidence 4679999999999999999998643 44432112111223333332111111 122345566666666666666666
Q ss_pred C
Q 010896 445 G 445 (498)
Q Consensus 445 g 445 (498)
+
T Consensus 154 ~ 154 (200)
T d1u0ma1 154 Y 154 (200)
T ss_dssp S
T ss_pred C
Confidence 4
|