Citrus Sinensis ID: 010903

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------50
Protein Sequence
MAKDYQSLQSHFLDILQQEEAQKSKDKISTHHDQENEEVDELVSLSLGRTSAQPKKDEKKICNNLSDGHEKNDKEGLALGLDCSRFEFSSNSRESENRPSPANTTCEQLKEQEPTEIWSPSKINIKSKRSDDQDEEVFQKAQLKKARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNHPLPISATAMASTTSAAASMLQCRSSTSQLGTSVSVSTPPNLHGLNFIFSENARPHDQLNFSSSSISNTNAHPTIVLDLTAPATFSHFNRLSSSAPRYNSSSTSLNFSSPFSTNSLQTSWSSGYSNNYANYLGKQPAQEHIYKPYMQMMNNPRTPPPIPQVQSLTESTIAATTKIITSNPNFQSALAAAISSYIGQQNVGGPGESSSLDMKCGKPNFSIKSAADSSAQNGTLGFASSLLDKYLPSSTHQQPAVSIFPLNSPPFSASKTALGSPVEVKDHVKI
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccHHHHHHHHccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccHHHHccccccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcccccccccccHHHcccEEEccccccccEEEEccccccccHHHHEEcccccEEEEEEEcccccccccccHcccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccHcccccccccccccHHHccccccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MAKDYQSLQSHFLDILQQEEAQKSkdkisthhdqeneeVDELVSLSlgrtsaqpkkdeKKICNnlsdghekndkeglalgldcsrfefssnsresenrpspanttceqlkeqepteiwspskinikskrsddqdEEVFQKAQLKKARVSVrarcdtptmndgcqwrkygqkiakgnpcprayyrctisptcpvrkqVQRWHEDMSILITTyegthnhplpisatAMASTTSAAASMLQCrsstsqlgtsvsvstppnlhglnfifsenarphdqlnfssssisntnahptivldltapatfshfnrlsssaprynssstslnfsspfstnslqtswssgysnnyanylgkqpaqehiykpymqmmnnprtpppipqvqslteSTIAATTKIITSNPNFQSALAAAISSYIgqqnvggpgesssldmkcgkpnfsiksaadssaqngtlGFASSLldkylpssthqqpavsifplnsppfsasktalgspvevkdhvki
Flexible Loop (DISEMBL)
MAKDYQSLQSHFLDILQQEEAQKSKDKIsthhdqeneevdelVSLSlgrtsaqpkkdeKKICNnlsdghekndkeGLALGLDCSRFEFssnsresenrpspanttceqlkeqepteiwspskinikskrsddqdEEVFQKaqlkkarvsvrarcdtptmndgcqwrkygqKIAKGNPCPRAYYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNHPLPISATAMASTTSAAASMLQCRSSTSQLGTSVSVSTPPNLHGLNFIFSENARPHDQLNFSSSSISNTNAHPTIVLDLTAPATFSHFNRLSSSAPRYNSSSTSLNFSSPFSTNSLQTSWSSGYSNNYANYLGKQPAQEHIYKPYMQMMNNPRTPPPIPQVQSLTESTIAATTKIITSNPNFQSALAAAISSYIGQQNVGGPGESSSLDMKCGKPNFSIKSAADSSAQNGTLGFASSLLDKYLPSSTHQQPAVSIFPLNSPPfsasktalgspvevkdhvki
Low Complexity Region (SEG)
MAKDYQSLQSHFLDILQQEEAQKSKDKISTHHDQENEEVDELVSLSLGRTSAQPKKDEKKICNNLSDGHEKNDKEGLALGLDCsrfefssnsresenrpspANTTCEQLKEQEPTEIWSPSKINIKSKRSDDQDEEVFQKAQLKKARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNHPLPIsatamasttsaaasmLQCRSSTSQLGTSVSVSTPPNLHGLNFIFSENARPHDQLNFSSSSISNTNAHPTIVLDLTAPATFSHFNRLSSSAPRYNssstslnfsspfstnslQTSWSSGYSNNYANYLGKQPAQEHIYKPYMQMMNNPRTPPPIPQVQSLtestiaattkiitsNPNFQSALAAAISSYIGQQNVGGPGESSSLDMKCGKPNFSIKSAADSSAQNGTLGFASSLLDKYLPSSTHQQPAVSIFPLNSPPFSASKTALGSPVEVKDHVKI
Disordered region (IsUnstruct)
*****************************************************************************************************************************************************VRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNHPL***************************************HGLNFIF************************TIVLDLTAPATFS****************************************NYANYLG*******I***************************IAATTKIITSNPNFQSALAAAISSYI****************************************************************************************
Disordered Region (DISOPRED)
*AKDYQSLQSHFL****************************************************************************************************************************************VRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNHPL*********************************************************************************************************************************************************************IAATTKIITSNPNFQSALAAAIS*******************************************************************************************
Disordered Region (DISEMBL)
MAKDYQSLQSHFLDILQQEE********************ELVSLSLGR*********KKICNNLSDGHEKNDKEGLALGLDCSRFE*****************************IWSPSKINIK**************************RCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNHPLPISATAMA************************VSTPPNLHGLNFIFSENARPHDQLNFSSSSISNTNAHPTIVLDLTAPATFSHFNRLS****************SPFSTNSLQTSWSSGYSNNYANYLGKQPAQEHIYKPYMQMMNNPRTPPPIPQVQSLTESTIAATTKIITSNPNFQSALAAAISSYIGQQ***********DMKCGKPNFSIKSAADSSAQNGTLGFASSLLDKYLPSSTHQQPAVSIFPLNSPPFSAS****************
Disordered Region (DISPRO)
*AKDYQSLQSHFLDILQQE***************************************************************************************************************************LKKARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNHPL******************************************************QLNFSSSSISNTNAHPTIVLDLTAPATFSHFNRLSSSAPRYNSSSTSLNFSSPFSTNSLQTSWSSGYSNNYANYLGKQPAQE*IY*P*********************ESTIAATTKIITSNPNFQSALAAAISSYIGQ**************************************************************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAKDYQSLQSHFLDILQQEEAQKSKDKISTHHDQENEEVDELVSLSLGRTSAQPKKDEKKICNNLSDGHEKNDKEGLALGLDCSRFEFSSNSRESENRPSPANTTCEQLKEQEPTEIWSPSKINIKSKRSDDQDEEVFQKAQLKKARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNHPLPISATAMASTTSAAASMLQCRSSTSQLGTSVSVSTPPNLHGLNFIFSENARPHDQLNFSSSSISNTNAHPTIVLDLTAPATFSHFNRLSSSAPRYNSSSTSLNFSSPFSTNSLQTSWSSGYSNNYANYLGKQPAQEHIYKPYMQMMNNPRTPPPIPQVQSLTESTIAATTKIITSNPNFQSALAAAISSYIGQQNVGGPGESSSLDMKCGKPNFSIKSAADSSAQNGTLGFASSLLDKYLPSSTHQQPAVSIFPLNSPPFSASKTALGSPVEVKDHVKI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	498	2.2.26 [Sep-21-2011]
Q9LXG8	548	Probable WRKY transcripti	yes	no	0.863	0.784	0.382	2e-63
Q8VWV6	480	Probable WRKY transcripti	no	no	0.789	0.818	0.410	5e-55
Q9C9F0	374	Probable WRKY transcripti	no	no	0.188	0.251	0.819	4e-44
Q9CAR4	387	Probable WRKY transcripti	no	no	0.534	0.687	0.413	3e-43
Q9XEC3	528	Probable WRKY transcripti	no	no	0.301	0.284	0.567	8e-43
Q9C519	553	WRKY transcription factor	no	no	0.554	0.499	0.413	2e-39
Q9ZSI7	489	Probable WRKY transcripti	no	no	0.240	0.245	0.563	5e-35
Q93WT0	538	Probable WRKY transcripti	no	no	0.289	0.267	0.598	1e-34
Q9C5T4	310	WRKY transcription factor	no	no	0.198	0.319	0.454	4e-22
Q9SAH7	302	Probable WRKY transcripti	no	no	0.170	0.281	0.488	1e-21

>sp|Q9LXG8|WRK72_ARATH Probable WRKY transcription factor 72 OS=Arabidopsis thaliana GN=WRKY72 PE=2 SV=1

 Score =  243 bits (620), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 198/518 (38%), Positives = 269/518 (51%), Gaps = 88/518 (16%)

Query: 4   DYQSLQSHFLDILQQE---EAQKSKDKIS---------THHDQENEEVDELVSLSLGRTS 51
           DY+SL+  F DI+QQE    A K+++ +          +  DQE E V   +       S
Sbjct: 63  DYKSLKLRFFDIIQQEPSNTATKNQNMVDHPKPTTTDLSSFDQERELVSLSLGRRSSSPS 122

Query: 52  -AQPKKDEK-KICNNLSDGHEKNDKEGLALGLDCSRFEFSSNSRESENRPSPANTTCEQL 109
            + PKK+EK    +   +  E+  K GL LG++             ENR   AN+  E  
Sbjct: 123 DSVPKKEEKTDAISAEVNADEELTKAGLTLGINNGNGGEPKEGLSMENR---ANSGSE-- 177

Query: 110 KEQEPTEIWSPSKINIKSKRS-------DDQDEEVFQKAQLKKARVSVRARCDTPTMNDG 162
                 E W+P K+    KRS        D D E  Q+  +K+ARV VRARCDTPTMNDG
Sbjct: 178 ------EAWAPGKVT--GKRSSPAPASGGDADGEAGQQNHVKRARVCVRARCDTPTMNDG 229

Query: 163 CQWRKYGQKIAKGNPCPRAYYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNHPLPIS 222
           CQWRKYGQKIAKGNPCPRAYYRCT++P CPVRKQVQR  +DMSILITTYEGTH+H LP+S
Sbjct: 230 CQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCADDMSILITTYEGTHSHSLPLS 289

Query: 223 ATAMASTTSAAASMLQCRSSTSQLGTSVSVSTPPNLHGLNFIFSENARPHDQLNFSSSSI 282
           AT MASTTSAAASML   SS+S     +           N ++  +   ++  +F S ++
Sbjct: 290 ATTMASTTSAAASMLLSGSSSSPAAEMIG----------NNLYDNSRFNNNNKSFYSPTL 339

Query: 283 SNTNAHPTIVLDLTAP---------ATFSHFNRLSSSAPRY----NSSSTSLNFSSPFST 329
            ++  HPT+ LDLTAP             +FN+ S+S  R+     + S++ + SS  ST
Sbjct: 340 -HSPLHPTVTLDLTAPQHSSSSSSSLLSLNFNKFSNSFQRFPSTSLNFSSTSSTSSNPST 398

Query: 330 NSLQTSWSSGYSNNYANYLGKQPAQEHIYKPYMQM-MNNPRTPPPIPQVQSLTESTIAAT 388
            +L   W +GYS +Y  Y            PY  +          +   QSLTE+     
Sbjct: 399 LNLPAIWGNGYS-SYTPY------------PYNNVQFGTSNLGKTVQNSQSLTET----L 441

Query: 389 TKIITSNPNFQSALAAAISSYI---GQQNVGGPGESSSLDMKCGKPNFSIKSAADSSAQN 445
           TK +TS+P+F S +AAAIS+ +   G+Q + GP  S S +         I+    ++   
Sbjct: 442 TKALTSDPSFHSVIAAAISTMVGSNGEQQIVGPRHSISNN---------IQQTNTTNNNK 492

Query: 446 GTLGFASSLLDKYLPSSTHQQPAVSIFPLNSPPFSASK 483
           G  G+ SSLL   + +S     ++       PPFS  K
Sbjct: 493 GCGGYFSSLLMSNIMASNQTGASLDQPSSQLPPFSMFK 530

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8VWV6|WRK61_ARATH Probable WRKY transcription factor 61 OS=Arabidopsis thaliana GN=WRKY61 PE=2 SV=1

 Score =  215 bits (548), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 190/463 (41%), Positives = 256/463 (55%), Gaps = 70/463 (15%)

Query: 1   MAKDYQSLQSHFLDILQQEEAQKSKDKISTHH-----DQENEEV---DELVSLSLGRT-- 50
           + KD+  LQ+ + + L  +  + +K +   HH     D++ E+V   +ELVSLSLGR   
Sbjct: 18  IKKDFDILQTQY-NQLMAKHNEPTKFQSKGHHQDKGEDEDREKVNEREELVSLSLGRRLN 76

Query: 51  ----SAQPKKDEKKICNNLS-----DGHEKNDKEGLALGLDCSRFEFSSNSRESENRPSP 101
               S   K+++ K           D +EK+  +GL++G+     E+ + S  +E     
Sbjct: 77  SEVPSGSNKEEKNKDVEEAEGDRNYDDNEKSSIQGLSMGI-----EYKALSNPNEKLEID 131

Query: 102 ANTTCEQLKEQEPTEIWSPSKINIKSKRSDDQDEE-VFQKAQLKKARVSVRARCDTPTMN 160
            N     L+     +I S +    K+   D +DE+ +  +  +KK RVSVR+RC+TPTMN
Sbjct: 132 HNQETMSLEISNNNKIRSQNSFGFKNDGDDHEDEDEILPQNLVKKTRVSVRSRCETPTMN 191

Query: 161 DGCQWRKYGQKIAKGNPCPRAYYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNHPLP 220
           DGCQWRKYGQKIAKGNPCPRAYYRCTI+ +CPVRKQVQR  EDMSILI+TYEGTHNHPLP
Sbjct: 192 DGCQWRKYGQKIAKGNPCPRAYYRCTIAASCPVRKQVQRCSEDMSILISTYEGTHNHPLP 251

Query: 221 ISATAMASTTSAAASMLQCRSSTSQLGTSVSVSTPPNLHGLNFIFS-ENARPHDQLNFSS 279
           +SATAMAS TSAAASML   +S+S    +       +LHGLNF  S  N  P  + +F  
Sbjct: 252 MSATAMASATSAAASMLLSGASSSSSAAA-------DLHGLNFSLSGNNITPKPKTHFLQ 304

Query: 280 SSISNTNAHPTIVLDLTAPAT-----FSHFNRLSS---SAPRYNSS-STSLNFSSPFSTN 330
           S  S+   HPT+ LDLT  ++      S  NR SS   +  R NS  ST+LNFS+  +TN
Sbjct: 305 SPSSS--GHPTVTLDLTTSSSSQQPFLSMLNRFSSPPSNVSRSNSYPSTNLNFSN--NTN 360

Query: 331 SLQTSWSSGY--SNNY-ANYLGKQPAQEHIYKPYMQMMNNPRTPPPI--------PQVQ- 378
           +L  +W  G   S+ Y A Y      Q+  Y   +Q      +  P         PQ+  
Sbjct: 361 TLM-NWGGGGNPSDQYRAAYGNINTHQQSPYHKIIQTRTAGSSFDPFGRSSSSHSPQINL 419

Query: 379 ----------SLTESTIAATTKIITSNPNFQSALAAAISSYIG 411
                         S  A T K IT++P+FQSALA A+SS +G
Sbjct: 420 DHIGIKNIISHQVPSLPAETIKAITTDPSFQSALATALSSIMG 462

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C9F0|WRKY9_ARATH Probable WRKY transcription factor 9 OS=Arabidopsis thaliana GN=WRKY9 PE=2 SV=1

 Score =  179 bits (455), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 77/94 (81%), Positives = 84/94 (89%)

Query: 144 KKARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTISPTCPVRKQVQRWHED 203
           +KARVSVRARC+T TMNDGCQWRKYGQK AKGNPCPRAYYRCT++P CPVRKQVQR  ED
Sbjct: 219 RKARVSVRARCETATMNDGCQWRKYGQKTAKGNPCPRAYYRCTVAPGCPVRKQVQRCLED 278

Query: 204 MSILITTYEGTHNHPLPISATAMASTTSAAASML 237
           MSILITTYEGTHNHPLP+ ATAMAST S +  +L
Sbjct: 279 MSILITTYEGTHNHPLPVGATAMASTASTSPFLL 312

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9CAR4|WRK36_ARATH Probable WRKY transcription factor 36 OS=Arabidopsis thaliana GN=WRKY36 PE=2 SV=1

 Score =  176 bits (446), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 124/300 (41%), Positives = 167/300 (55%), Gaps = 34/300 (11%)

Query: 4   DYQSLQSHFLDILQQEEAQKSKDKISTHHDQENEEVDELVSLSLGRTSAQPKKDEKKICN 63
           +Y SLQ     +L Q++   S +        EN + D  +SL LGR+  +  K E+   +
Sbjct: 53  NYNSLQMQVSKVLGQQQGASSMELDHIDRQDENNDYDVDISLRLGRSEQKISKKEENKVD 112

Query: 64  NLS--DGHEKNDKEGLALGLDCSRFEFSSNSRESENRPSPANTTCEQLKEQEPTEIWSPS 121
            +S  +  E  DK   ALG     F F   S E+    S  +  C Q+K          S
Sbjct: 113 KISTKNVEESKDKRS-ALG-----FGFQIQSYEA----SKLDDLCRQVKLANAENKCVSS 162

Query: 122 KINIKSKRSDDQDE--EVFQKAQLKKARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCP 179
           + ++KS R+++  +  E  ++  LKK RV V+A C+ P++NDGCQWRKYGQK AK NP P
Sbjct: 163 RKDVKSVRNENHQDVLEEHEQTGLKKTRVCVKASCEDPSINDGCQWRKYGQKTAKTNPLP 222

Query: 180 RAYYRCTISPTCPVRKQVQRW-HEDMSILITTYEGTHNHPLPISATAMASTTSAAASMLQ 238
           RAYYRC++S  CPVRKQVQR   E+ S  +TTYEG H+HPLP+ A+ MA+ TSAAAS+LQ
Sbjct: 223 RAYYRCSMSSNCPVRKQVQRCGEEETSAFMTTYEGNHDHPLPMEASHMAAGTSAAASLLQ 282

Query: 239 CRSSTSQLGTSVSVSTPPNLHGLNFIFSENARPHDQLNFSSSSISNTNAHPTIVLDLTAP 298
             SS+S   TS S+S         + F           F   SIS TN+HPT+ LDLT P
Sbjct: 283 SGSSSSSSSTSASLS---------YFFP----------FHHFSISTTNSHPTVTLDLTRP 323

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9XEC3|WRK42_ARATH Probable WRKY transcription factor 42 OS=Arabidopsis thaliana GN=WRKY42 PE=2 SV=1

 Score =  175 bits (443), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 92/162 (56%), Positives = 111/162 (68%), Gaps = 12/162 (7%)

Query: 135 EEVFQKAQLKKARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTISPTCPVR 194
           E+   +A ++KARVSVRAR + P ++DGCQWRKYGQK+AKGNPCPRAYYRCT++  CPVR
Sbjct: 267 EQAAAEATMRKARVSVRARSEAPMLSDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVR 326

Query: 195 KQVQRWHEDMSILITTYEGTHNHPLPISATAMASTTSAAASMLQCRSSTSQLGTSVSVST 254
           KQVQR  ED +ILITTYEG HNHPLP +A  MASTT+AAASML            +S ST
Sbjct: 327 KQVQRCAEDRTILITTYEGNHNHPLPPAAMNMASTTTAAASML------------LSGST 374

Query: 255 PPNLHGLNFIFSENARPHDQLNFSSSSISNTNAHPTIVLDLT 296
             N  GL    +  AR     + S ++IS +   PTI LDLT
Sbjct: 375 MSNQDGLMNPTNLLARTILPCSSSMATISASAPFPTITLDLT 416

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C519|WRKY6_ARATH WRKY transcription factor 6 OS=Arabidopsis thaliana GN=WRKY6 PE=1 SV=1

 Score =  164 bits (414), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/307 (41%), Positives = 171/307 (55%), Gaps = 31/307 (10%)

Query: 110 KEQEP-TEIWSPSKINIKSKRSDDQDEEVFQKAQLKKARVSVRARCDTPTMNDGCQWRKY 168
           +E+ P TE     K+N  +  + DQ  E    A ++KARVSVRAR + P ++DGCQWRKY
Sbjct: 265 REESPETESNKIQKVNSTTPTTFDQTAE----ATMRKARVSVRARSEAPMISDGCQWRKY 320

Query: 169 GQKIAKGNPCPRAYYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNHPLPISATAMAS 228
           GQK+AKGNPCPRAYYRCT++  CPVRKQVQR  ED SILITTYEG HNHPLP +A AMAS
Sbjct: 321 GQKMAKGNPCPRAYYRCTMATGCPVRKQVQRCAEDRSILITTYEGNHNHPLPPAAVAMAS 380

Query: 229 TTSAAASMLQCRSSTSQLGTSVSVSTPPNLHGLNFIFSENARPHDQLNFSSSSISNTNAH 288
           TT+AAA+ML   S +S  G    +  P NL          AR     + S ++IS +   
Sbjct: 381 TTTAAANMLLSGSMSSHDG----MMNPTNLL---------ARAVLPCSTSMATISASAPF 427

Query: 289 PTIVLDLTAPATFSHFNRLSSSAPRYNSSSTSLNFSSPFSTNSLQTSWSSGYSNNYANYL 348
           PT+ LDLT      + +  SSSA   N+ ++ +    P       T+   G      + +
Sbjct: 428 PTVTLDLTHSPPPPNGSNPSSSAATNNNHNSLM--QRPQQQQQQMTNLPPGM---LPHVI 482

Query: 349 GKQPAQEHIYKPYMQMMNNPRTPPPIPQVQSLTES-TIAATTKIITSNPNFQSALAAAIS 407
           G+    +  +        +P T        + ++S  +A T   +T++PNF +ALAA IS
Sbjct: 483 GQALYNQSKFSGLQFSGGSPSTA-------AFSQSHAVADTITALTADPNFTAALAAVIS 535

Query: 408 SYIGQQN 414
           S I   N
Sbjct: 536 SMINGTN 542

Transcription factor involved in the control of processes related to senescence and pathogen defense. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Activates the transcription of the SIRK gene and represses its own expression and that of the WRKY42 genes.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZSI7|WRK47_ARATH Probable WRKY transcription factor 47 OS=Arabidopsis thaliana GN=WRKY47 PE=2 SV=2

 Score =  149 bits (376), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 75/133 (56%), Positives = 89/133 (66%), Gaps = 13/133 (9%)

Query: 97  NRPSPANTTCEQLKEQEPTEI-------WSPSKINIKSKRSDDQDEEVFQKAQL--KKAR 147
           N  +PA T    LK + P ++        SP    I   +S + +E+     QL  +KAR
Sbjct: 171 NHETPATT----LKRRSPDDVDGRDMHRGSPKTPRIDQNKSTNHEEQQNPHDQLPYRKAR 226

Query: 148 VSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTISPTCPVRKQVQRWHEDMSIL 207
           VSVRAR D  T+NDGCQWRKYGQK+AKGNPCPRAYYRCT++  CPVRKQVQR  ED +IL
Sbjct: 227 VSVRARSDATTVNDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDTTIL 286

Query: 208 ITTYEGTHNHPLP 220
            TTYEG HNHPLP
Sbjct: 287 TTTYEGNHNHPLP 299

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|Q93WT0|WRK31_ARATH Probable WRKY transcription factor 31 OS=Arabidopsis thaliana GN=WRKY31 PE=2 SV=1

 Score =  148 bits (373), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/157 (59%), Positives = 111/157 (70%), Gaps = 13/157 (8%)

Query: 140 KAQLKKARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTISPTCPVRKQVQR 199
           +A ++KARVSVRAR +   ++DGCQWRKYGQK+AKGNPCPRAYYRCT++  CPVRKQVQR
Sbjct: 277 EATMRKARVSVRARSEAAMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAGGCPVRKQVQR 336

Query: 200 WHEDMSILITTYEGTHNHPLPISATAMASTTSAAASMLQCRSSTSQLGTSVSVSTPPNLH 259
             ED SILITTYEG HNHPLP +ATAMASTT+AAASML   S +SQ G    +  P NL 
Sbjct: 337 CAEDRSILITTYEGNHNHPLPPAATAMASTTTAAASMLLSGSMSSQDG----LMNPTNLL 392

Query: 260 GLNFIFSENARPHDQLNFSSSSISNTNAHPTIVLDLT 296
                    AR     + S ++IS +   PTI LDLT
Sbjct: 393 ---------ARAILPCSSSMATISASAPFPTITLDLT 420

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C5T4|WRK18_ARATH WRKY transcription factor 18 OS=Arabidopsis thaliana GN=WRKY18 PE=1 SV=2

 Score =  106 bits (265), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 45/99 (45%), Positives = 67/99 (67%)

Query: 138 FQKAQLKKARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTISPTCPVRKQV 197
           F KA++    V       + T+ DG QWRKYGQK+ + NP PRAY+RC+ +P+CPV+K+V
Sbjct: 154 FNKAKVSTVYVPTETSDTSLTVKDGFQWRKYGQKVTRDNPSPRAYFRCSFAPSCPVKKKV 213

Query: 198 QRWHEDMSILITTYEGTHNHPLPISATAMASTTSAAASM 236
           QR  ED S+L+ TYEGTHNH  P ++   A++   ++++
Sbjct: 214 QRSAEDPSLLVATYEGTHNHLGPNASEGDATSQGGSSTV 252

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Positively modulates defense-related gene expression and disease resistance.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SAH7|WRK40_ARATH Probable WRKY transcription factor 40 OS=Arabidopsis thaliana GN=WRKY40 PE=1 SV=1

 Score =  105 bits (261), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 43/88 (48%), Positives = 58/88 (65%)

Query: 133 QDEEVFQKAQLKKARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTISPTCP 192
           Q EE   K ++ +      A   T  + DG QWRKYGQK+ + NP PRAY++C  +P+C 
Sbjct: 119 QREETVVKEKVSRVYYKTEASDTTLVVKDGYQWRKYGQKVTRDNPSPRAYFKCACAPSCS 178

Query: 193 VRKQVQRWHEDMSILITTYEGTHNHPLP 220
           V+K+VQR  ED S+L+ TYEG HNHP+P
Sbjct: 179 VKKKVQRSVEDQSVLVATYEGEHNHPMP 206

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	498
296086420	594	unnamed protein product [Vitis vinifera]	0.951	0.797	0.538	1e-106
255558194	562	WRKY transcription factor, putative [Ric	0.871	0.772	0.492	1e-97
359473376	547	PREDICTED: probable WRKY transcription f	0.869	0.791	0.514	7e-97
356519041	615	PREDICTED: probable WRKY transcription f	0.957	0.775	0.472	1e-84
356501916	531	PREDICTED: probable WRKY transcription f	0.779	0.730	0.495	4e-84
356497856	500	PREDICTED: probable WRKY transcription f	0.771	0.768	0.480	2e-82
359491334	611	PREDICTED: probable WRKY transcription f	0.919	0.749	0.460	6e-82
297734011	605	unnamed protein product [Vitis vinifera]	0.919	0.757	0.460	7e-82
255552876	560	WRKY transcription factor, putative [Ric	0.909	0.808	0.465	5e-80
356507162	604	PREDICTED: LOW QUALITY PROTEIN: probable	0.925	0.763	0.440	2e-79

>gi|296086420|emb|CBI32009.3| unnamed protein product [Vitis vinifera]

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 284/527 (53%), Positives = 351/527 (66%), Gaps = 53/527 (10%)

Query: 1   MAKDYQSLQSHFLDILQQEEAQKSKDKISTHHDQENEEVDELVSLSLGR-TSAQPKKDEK 59
           + KDYQSLQ  F +I Q EEA+KS D I TH ++E EE D L+SLSLGR +SA+ KKD+K
Sbjct: 91  IKKDYQSLQMQFSEIAQHEEARKSTDTILTHQEEEEEETD-LISLSLGRVSSAESKKDDK 149

Query: 60  K--ICNNLSDGHEKNDKEGLALGLDCSRFEFSSNSRESENRPSPANTTCEQLKEQEP-TE 116
           K    +    G EK D EGLALGL+C   +F     E     SP N+  E  KE+EP TE
Sbjct: 150 KTSFLSGKGKGDEKMD-EGLALGLEC---KFEPAPTEHMMNASPENS-FEGPKEEEPSTE 204

Query: 117 IWSPSKINIKSKRSDDQDEEVFQKAQLKKARVSVRARCDTPTMNDGCQWRKYGQKIAKGN 176
            W PSKI +K  RS  +DEEV ++  LKKARVSVRARCDTPTMNDGCQWRKYGQKIAKGN
Sbjct: 205 TWPPSKI-LKMGRS--RDEEVLEQTHLKKARVSVRARCDTPTMNDGCQWRKYGQKIAKGN 261

Query: 177 PCPRAYYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNHPLPISATAMASTTSAAASM 236
           PCPRAYYRCT+SP+CPVRKQVQR  ED SILITTYEGTHNHPLP+SATAMASTTSAAASM
Sbjct: 262 PCPRAYYRCTVSPSCPVRKQVQRCAEDTSILITTYEGTHNHPLPVSATAMASTTSAAASM 321

Query: 237 LQCRSSTSQLGT-SVSVSTPPNLHGLNFIFSENARPHDQLNFSSSSISNTNAHPTIVLDL 295
           L+  SSTSQ G  + + S+  NLHGLNF   +N+R   Q  F +SS S +N+HPTI LDL
Sbjct: 322 LRSGSSTSQPGMEAFATSSTANLHGLNFSIPQNSR-SQQFYFPNSSFSTSNSHPTITLDL 380

Query: 296 TAPATFSHFNRLSS---SAPRYNSSSTSLNF-----SSPFSTNSLQTSWS--------SG 339
           TAP T SHFNRLSS   SAPRY   +T LNF     SSP   N+L TSW         S 
Sbjct: 381 TAP-TASHFNRLSSSFPSAPRY--PATCLNFSSSSSSSPLDPNNLPTSWGTLPSYGALSS 437

Query: 340 YSNNYA---NYLGKQPAQEHIYKPYMQMMNNPRTPPPIPQVQSLTESTIAATTKIITSNP 396
           Y+ N     N+  + P+QE+IY+PYMQ +NN       P  QSLTE+  A  TK I ++P
Sbjct: 438 YNKNQIGPFNFGMQPPSQENIYQPYMQKINN-----QAPSQQSLTETI-ATATKAIAADP 491

Query: 397 NFQSALAAAISSYIGQQNVGG------PGESSSLDMKCGKPNFSIKSAADSSAQNGTLGF 450
            F+SALAA I+S++G     G       GE+ S ++K G+  F   ++A +S+ NG +G 
Sbjct: 492 TFRSALAAVITSFVGNAGGAGGGENHVKGENPSHNLKWGE--FLSVNSALASSHNG-VGC 548

Query: 451 ASSLLDKYLPSSTHQQPAVSIFPLNSPPFSASKTALGSPVEVKDHVK 497
           ASS L++   +++ QQ  +  +P  S PFS  K+A  SP + KD+++
Sbjct: 549 ASSYLNRSSSANSQQQGNLISYP-PSFPFSVPKSASASPSDHKDNIQ 594

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255558194|ref|XP_002520124.1| WRKY transcription factor, putative [Ricinus communis] gi|223540616|gb|EEF42179.1| WRKY transcription factor, putative [Ricinus communis]

 Score =  363 bits (932), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 256/520 (49%), Positives = 327/520 (62%), Gaps = 86/520 (16%)

Query: 1   MAKDYQSLQSHFLDILQQEEAQKSKDKISTHHDQENEEVDELVSLSLGRTSAQPKKDEKK 60
           +  DYQSLQ HF  ++Q+EE +K   K++T H Q+N+E + +       +S++PKK+EKK
Sbjct: 105 ILNDYQSLQKHFCKVVQEEEEKKPA-KLTTAH-QKNQEPELVSLSLGRSSSSEPKKEEKK 162

Query: 61  ICNNLSDGHEKND--KEGLALGLDCSRFEFSSNSRESENRPSPANTTCEQLKEQEPTEIW 118
             +NLSDG+E ++   +GL+LGLDC +FE  S S   +N  S  N+  E  KE+EPTE W
Sbjct: 163 -SSNLSDGNEDDELNNKGLSLGLDC-KFEPDS-SVTVKNNASSENSFDEDPKEEEPTETW 219

Query: 119 SPSKINIKSKRSDDQDEEVFQKAQLKKARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPC 178
           SP+KI    K +   D+E  Q+ Q+KK RVSVRARCDTPTMNDGCQWRKYGQKIAKGNPC
Sbjct: 220 SPNKIR---KTTITPDDEAMQQNQIKKTRVSVRARCDTPTMNDGCQWRKYGQKIAKGNPC 276

Query: 179 PRAYYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNHPLPISATAMASTTSAAASMLQ 238
           PRAYYRCT SPTCPVRKQVQR  +DMS+LITTYEGTHNHPLP+SATAMASTTSAAASM+Q
Sbjct: 277 PRAYYRCTASPTCPVRKQVQRCAKDMSVLITTYEGTHNHPLPLSATAMASTTSAAASMIQ 336

Query: 239 CRSSTS-QLG-TSVSVSTPPNLHGLNFIFSENARPHDQLNFSSSSISNTNAHPTIVLDL- 295
            RSSTS Q G +  + S+    +GLNF  S+N+RP  Q+ F +SSIS +N+HPT+ LDL 
Sbjct: 337 SRSSTSAQPGSSISAPSSISTSNGLNFSLSQNSRPQ-QIYFPNSSISTSNSHPTVTLDLT 395

Query: 296 TAPATFS--HFNRLSSSAPRYNSSSTSLNFSSPF--------STNSLQTSWSSGYSNNYA 345
           TAP+T +  +FNR  SSAPR       LNFSS          + N+LQ+ W+    + Y 
Sbjct: 396 TAPSTTTAQYFNRF-SSAPR------CLNFSSSPSSTSLDQSNINTLQSLWNPSSYSTYG 448

Query: 346 ------NYLGKQ--PAQEHIYKPYMQMMNNPRTPPPIPQVQSLTESTIAATTKIITSNPN 397
                 NY+ KQ  P   H+Y+PYM ++N+  TPP  P  QSLTES IAA TK+ITSNPN
Sbjct: 449 TVPLNRNYVEKQPTPGNHHVYQPYMHIINSETTPP--PNQQSLTES-IAAATKMITSNPN 505

Query: 398 FQSALAAAISSYIGQQNVGGPGESSSLDMKCGKPNFSIKSAADSSAQNGTLGFASSLLDK 457
           F                                           S  NG +G ASS L+K
Sbjct: 506 F-------------------------------------------SNSNG-IGCASSYLNK 521

Query: 458 YLPSSTHQQPAVSIFPLNSPPFSASKTALGSPVEVKDHVK 497
              S + QQ ++ +FP + P  SA+++A  SP   +DH K
Sbjct: 522 SATSLSSQQGSLVLFPGSLPFSSATRSASESPANSRDHNK 561

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359473376|ref|XP_002270659.2| PREDICTED: probable WRKY transcription factor 72 [Vitis vinifera]

 Score =  360 bits (925), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 268/521 (51%), Positives = 324/521 (62%), Gaps = 88/521 (16%)

Query: 1   MAKDYQSLQSHFLDILQQEEAQKSKDKISTHHDQENEEVDELVSLSLGR-TSAQPKKDEK 59
           + KDYQSLQ  F +I Q EEA+KS D I TH ++E EE D L+SLSLGR +SA+ KKD+K
Sbjct: 91  IKKDYQSLQMQFSEIAQHEEARKSTDTILTHQEEEEEETD-LISLSLGRVSSAESKKDDK 149

Query: 60  K--ICNNLSDGHEKNDKEGLALGLDCSRFEFSSNSRESENRPSPANTTCEQLKEQEP-TE 116
           K    +    G EK D EGLALGL+C   +F     E     SP N+  E  KE+EP TE
Sbjct: 150 KTSFLSGKGKGDEKMD-EGLALGLEC---KFEPAPTEHMMNASPENS-FEGPKEEEPSTE 204

Query: 117 IWSPSKINIKSKRSDDQDEEVFQKAQLKKARVSVRARCDTPTMNDGCQWRKYGQKIAKGN 176
            W PSKI +K  RS  +DEEV ++  LKKARVSVRARCDTPTMNDGCQWRKYGQKIAKGN
Sbjct: 205 TWPPSKI-LKMGRS--RDEEVLEQTHLKKARVSVRARCDTPTMNDGCQWRKYGQKIAKGN 261

Query: 177 PCPRAYYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNHPLPISATAMASTTSAAASM 236
           PCPRAYYRCT+SP+CPVRKQVQR  ED SILITTYEGTHNHPLP+SATAMASTTSAAASM
Sbjct: 262 PCPRAYYRCTVSPSCPVRKQVQRCAEDTSILITTYEGTHNHPLPVSATAMASTTSAAASM 321

Query: 237 LQCRSSTSQLGT-SVSVSTPPNLHGLNFIFSENARPHDQLNFSSSSISNTNAHPTIVLDL 295
           L+  SSTSQ G  + + S+  NLHGLNF   +N+R   Q  F +SS S +N+HPTI LDL
Sbjct: 322 LRSGSSTSQPGMEAFATSSTANLHGLNFSIPQNSR-SQQFYFPNSSFSTSNSHPTITLDL 380

Query: 296 TAPATFSHFNRLSS---SAPRYNSSSTSLNF-----SSPFSTNSLQTSWS--------SG 339
           TAP T SHFNRLSS   SAPRY   +T LNF     SSP   N+L TSW         S 
Sbjct: 381 TAP-TASHFNRLSSSFPSAPRY--PATCLNFSSSSSSSPLDPNNLPTSWGTLPSYGALSS 437

Query: 340 YSNNYA---NYLGKQPAQEHIYKPYMQMMNNPRTPPPIPQVQSLTESTIAATTKIITSNP 396
           Y+ N     N+  + P+QE+IY+PYMQ +NN       P  QSLTE+  A  TK I ++P
Sbjct: 438 YNKNQIGPFNFGMQPPSQENIYQPYMQKINN-----QAPSQQSLTETI-ATATKAIAADP 491

Query: 397 NFQSALAAAISSYIGQQNVGGPGESSSLDMKCGKPNFSIKSAADSSAQNGTLGFASSLLD 456
            F                                           S+ NG +G ASS L+
Sbjct: 492 TF-------------------------------------------SSHNG-VGCASSYLN 507

Query: 457 KYLPSSTHQQPAVSIFPLNSPPFSASKTALGSPVEVKDHVK 497
           +   +++ QQ  +  +P  S PFS  K+A  SP + KD+++
Sbjct: 508 RSSSANSQQQGNLISYP-PSFPFSVPKSASASPSDHKDNIQ 547

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356519041|ref|XP_003528183.1| PREDICTED: probable WRKY transcription factor 72-like [Glycine max]

 Score =  320 bits (819), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 255/540 (47%), Positives = 324/540 (60%), Gaps = 63/540 (11%)

Query: 1   MAKDYQSLQSHFLDILQQEEAQKSKDKISTHHDQENEEVDELVSLSLGRTSAQPKKDEKK 60
           +  DY++LQ  F +I++QE    S  K++ ++DQ   +   LVSLSLGR   +   ++  
Sbjct: 91  ILNDYRALQMQFHNIVEQETKDSSDQKVNNNNDQYQIDESNLVSLSLGRLPTR-NNNKVP 149

Query: 61  ICNNLSDGHEKNDKEGLALGLDCSRFEFS-SNSRESENRP---SPANTTCEQLKEQEPTE 116
               L +  EK DKEGL+LGLDC +FE S S    +E  P   SP N+  E  KE+   E
Sbjct: 150 NNKPLKEEAEKEDKEGLSLGLDC-KFETSKSGISTTEYLPIHQSPNNSVEEVPKEEAAGE 208

Query: 117 IWSPSKINIKSKRSDDQDEEVFQKAQLKKARVSVRARCDTPTMNDGCQWRKYGQKIAKGN 176
            W P K  IK+ R    ++EV Q+   KKARV VRARCDTPTMNDGCQWRKYGQKI+KGN
Sbjct: 209 SWQPGK-GIKTARDATGEDEVSQQNPAKKARVCVRARCDTPTMNDGCQWRKYGQKISKGN 267

Query: 177 PCPRAYYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNHPLPISATAMASTTSAAASM 236
           PCPRAYYRCT++P+CPVRKQVQR  +DMSIL TTYEG HNHPLP+SATAMASTTSAAASM
Sbjct: 268 PCPRAYYRCTVAPSCPVRKQVQRCAQDMSILFTTYEGNHNHPLPLSATAMASTTSAAASM 327

Query: 237 LQCRSSTSQLGTSVSVS-TPPNLHGLNFIFSENARPHDQLNFSS-SSISNTNAHPTIVLD 294
           L   SSTS  GT  S + T  +LHG+NF  S+ ++   Q   S  +++S++ +HPTI LD
Sbjct: 328 LLSGSSTSHSGTRPSTAMTTADLHGMNFFLSDGSKLSKQYYLSHPAALSSSPSHPTITLD 387

Query: 295 LT--------APATFSHFNRLSSSAPRYNSS-----STSLNFSSPFSTNSLQTSWSSG-- 339
           LT        + A    F    +S   YN++     STSLNFSS  S N+  TSWS+   
Sbjct: 388 LTSNNNPSSSSSAALVKF----TSNSNYNNTQRYPLSTSLNFSSSESNNAT-TSWSNNGF 442

Query: 340 --YSN--------NYANY-----LGKQPAQ--EHIYKPYMQMMNNPRTPPPIPQVQSLTE 382
             Y+N        N  N      LG+Q  Q  E+IY  YMQ  NN    PP    Q    
Sbjct: 443 LSYNNTLPYNSNRNVTNVLSNINLGRQQQQPMENIYNSYMQRNNNVPISPP----QHSLP 498

Query: 383 STIAATTKIITSNPNFQSALAAAISSYIG-----QQNVGGPGESSSLDMKCGKPNFSIKS 437
            TIAA TK+IT++PNFQSALAAA+++ IG     Q N GG GE+ S  MK G+  F   S
Sbjct: 499 DTIAAATKVITADPNFQSALAAALTTIIGSGSTTQGNHGGAGENLSQKMKWGEL-FPSSS 557

Query: 438 AADSSAQNGTLGFASSLLDKYLPSSTHQQPAVSIFPLNSP-PFSASKTALGSPVEVKDHV 496
           +A  S+     G ASS L+K   S+ + QP  ++  L  P P S+ K+A GSP    DH+
Sbjct: 558 SALPSSSTKVNGCASSFLNK---SAANTQPGTALMFLQPPLPLSSPKSASGSP---GDHI 611

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356501916|ref|XP_003519769.1| PREDICTED: probable WRKY transcription factor 72-like [Glycine max]

 Score =  318 bits (815), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 221/446 (49%), Positives = 275/446 (61%), Gaps = 58/446 (13%)

Query: 12  FLDILQQ---EEAQKSKDKISTHHDQENEEVDELVSLSLGRT--SAQPKKDEKKICNNLS 66
           F +ILQQ   E+A  +K   S  HD+ENEE  ELVSLSLG +    +P KDEK + N   
Sbjct: 64  FFEILQQDKPEDATNAKGVFS--HDEENEE-SELVSLSLGISISKGKPTKDEKILKN--K 118

Query: 67  DGHEKNDKEG-----LALGLDCSRFEFSSNSRESENRPSPANTTCEQLKEQEPTEIWSPS 121
           +G EK + E      L LGLD +      +   + N  + ++   E+ KE+EPTE+W PS
Sbjct: 119 NGIEKTEDEDVHNKRLVLGLDINLDPVDQDELTANNSTTESSFVGERGKEEEPTEMWPPS 178

Query: 122 KINIKSKRSDDQDEEVFQKAQLKKARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRA 181
           K+ +K+ +S D+ E V Q  Q KK RVS+RARCDT TMNDGC WRKYGQK+AKGNPCPRA
Sbjct: 179 KV-LKTMKSVDKSE-VSQHDQPKKTRVSIRARCDTQTMNDGCHWRKYGQKMAKGNPCPRA 236

Query: 182 YYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNHPLPISATAMASTTSAAASMLQCRS 241
           YYRCT SP+CPVRKQVQR  EDMSILITTYEGTHNHPLP+SATAMA TTSAAASMLQ  S
Sbjct: 237 YYRCTASPSCPVRKQVQRCAEDMSILITTYEGTHNHPLPMSATAMACTTSAAASMLQSPS 296

Query: 242 STSQLG-------TSVSVSTP---PNLHGLNFIFSENARPHDQLNFSSSSISNTNAHPTI 291
            +SQ G       + ++ S P   PN + LNF   + +RP  Q  F +SSIS  N+HPTI
Sbjct: 297 LSSQHGLVDSAISSIINSSAPYYNPN-NALNFSTHQVSRPQ-QFYFPNSSISTLNSHPTI 354

Query: 292 VLDLTAPATFSHFNRLSSSAPRYNSSSTSLNFSSPFS---TNSLQTSWS--SGYSN---- 342
            LDLT     S  N   +  P+Y  SST+LNFSS FS   ++  Q+ W+  SGY N    
Sbjct: 355 TLDLTT-PPTSSSNSSFTCMPKY--SSTNLNFSSGFSPLHSSMPQSPWNSYSGYFNSGTL 411

Query: 343 --------NYANYLGKQ---PAQEHIYKPYMQMMNNPRTPPPIPQVQSLTESTIAATTKI 391
                   NY    G Q    +  H+++P + M NN      I Q  S     +AAT  I
Sbjct: 412 SQNRHHGGNYMLNTGNQNQPHSLGHLHQP-IYMSNNST----ISQ-HSFPNPIVAATEAI 465

Query: 392 ITSNPNFQSALAAAISSYIGQQNVGG 417
           ITSNP FQSALA A+++Y+G +  GG
Sbjct: 466 ITSNPKFQSALATALTAYVGNEASGG 491

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356497856|ref|XP_003517772.1| PREDICTED: probable WRKY transcription factor 72-like [Glycine max]

 Score =  313 bits (801), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 213/443 (48%), Positives = 267/443 (60%), Gaps = 59/443 (13%)

Query: 12  FLDILQQE---EAQKSKDKISTHHDQENEEVDELVSLSLGRT--SAQPKKDEKKICNNLS 66
           F  IL  +   +A  +K   S  H +ENEE  ELVSLSLG +    +P K+EK I N + 
Sbjct: 41  FYGILHHDKPDDATNAKGVFS--HIEENEE-SELVSLSLGISISKGKPSKNEKMINNGIE 97

Query: 67  DGHEKNDKEGLALGLDCSRFEFSSNSRESENRPSPANTTCEQLKEQEPTEIWSPSKINIK 126
              +++  + L LGLD +  +       + N  +P ++  E  KE EPTE+W PSK++ K
Sbjct: 98  KREDEDVHKRLVLGLDIN-LDPVDQDELAANNSTPESSFGEGGKEDEPTEMWPPSKVS-K 155

Query: 127 SKRSDDQDEEVFQKAQLKKARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCT 186
           + +S+D+ E      Q KK RVS+RARCDT TMNDGCQWRKYGQK+AKGNPCPRAYYRCT
Sbjct: 156 TMKSEDKSE-ASPHYQPKKTRVSIRARCDTQTMNDGCQWRKYGQKMAKGNPCPRAYYRCT 214

Query: 187 ISPTCPVRKQVQRWHEDMSILITTYEGTHNHPLPISATAMASTTSAAASMLQCRSSTSQL 246
            SP+CPVRKQVQR  EDMSILITTYEGTHNHPLP+SATAMA TTSAAASMLQ  S +SQ 
Sbjct: 215 ASPSCPVRKQVQRCAEDMSILITTYEGTHNHPLPMSATAMACTTSAAASMLQSPSLSSQH 274

Query: 247 GTSVSVSTP-----------PNLHGLNFIFSENARPHDQLNFSSSSISNTNAHPTIVLDL 295
           G   S  +            PN + LNF   + +RP +Q  FS+SSIS  N+HPTI LDL
Sbjct: 275 GLVDSAISSIINSSAANYYNPN-NALNFSTHQVSRP-NQFYFSNSSISTLNSHPTITLDL 332

Query: 296 TAPATFSHFNRLSSSAPRYNSSSTSLNFSSPFS---TNSLQTSWSS-------------G 339
           TAP T S  N   +  P+Y  SST+LNFSS FS   ++  Q+ WSS              
Sbjct: 333 TAPPTSS--NSSFTHMPKY--SSTNLNFSSGFSPLHSSMPQSPWSSYNYFNSGTLSQNRK 388

Query: 340 YSNNYANYLGKQPAQEH----IYKP-YMQMMNNPRTPPPIPQVQSLTESTIAATTKIITS 394
           +  NY    G Q  Q H    +++P YM+     +   P P         I A TK ITS
Sbjct: 389 HGGNYLLNTGNQ-NQPHSLGNLHQPIYMRSNTISQHSLPDP---------IVAATKAITS 438

Query: 395 NPNFQSALAAAISSYIGQQNVGG 417
           NP FQSALA A+++Y+G +  GG
Sbjct: 439 NPKFQSALATALTTYVGNEAGGG 461

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359491334|ref|XP_002267867.2| PREDICTED: probable WRKY transcription factor 72 [Vitis vinifera]

 Score =  311 bits (796), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 241/523 (46%), Positives = 317/523 (60%), Gaps = 65/523 (12%)

Query: 1   MAKDYQSLQSHFLDILQQEEAQKSKDKISTHHDQENEEVDELVSLSLGRTSAQPKKDEKK 60
           + KDY++LQ  F D+++QE A++S +K S    +E     E VSLSLGR S+ PKKDEK 
Sbjct: 126 IMKDYKTLQMQFYDVVRQE-AKESTEKASILQIEE----PEFVSLSLGRVSSDPKKDEKN 180

Query: 61  ICNNLSDGHEKNDKEGLALGLDCSRFEFSSNSRESENRPSPANTTCEQLKEQEPTEIWSP 120
                S   +   K GL+LGLDC +FE  +        PSP N+      ++   E W P
Sbjct: 181 --KTTSKVEDDGVKGGLSLGLDC-KFEVLN--------PSPENSFGG--PKEAAGESWPP 227

Query: 121 SKINIKSKRSDDQDEEVFQKAQLKKARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPR 180
           SK ++K+ R+ D  +E+ Q+   K+ RVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPR
Sbjct: 228 SK-SLKTMRTGD--DEISQQNPAKRCRVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPR 284

Query: 181 AYYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNHPLPISATAMASTTSAAASMLQCR 240
           AYYRCT++P+CPVRKQVQR+ EDMSILITTYEGTHNHPLP SATAMASTTSAAASML   
Sbjct: 285 AYYRCTVAPSCPVRKQVQRFAEDMSILITTYEGTHNHPLPYSATAMASTTSAAASMLMSG 344

Query: 241 SSTSQLGTSVS--VSTPPNLHGLNFIFSENARPHDQLNFSSSSISNTNAHPTIVLDLTAP 298
           SS+SQ G+      +T  +LHG+NF  S+N++   Q    +SS+S  +++PTI LDLT  
Sbjct: 345 SSSSQSGSGSCPLSATSADLHGVNFYLSDNSK-SKQFYSINSSLSAVSSNPTITLDLTTA 403

Query: 299 ----ATFSHFNRLSSS--APRYNSSSTSLNFSSPFSTNSLQTSWSSGYSNNYANYLGKQP 352
               ++ SHFNRLSS+   PR+ S+  + + S    +NSL  SWS+G   +Y +    QP
Sbjct: 404 SSSSSSSSHFNRLSSNYPPPRFPSTGFNFSSS---ESNSLPISWSNGLL-SYGSTTTTQP 459

Query: 353 --------------AQEHIYKPYMQMMNNPRTPPPIPQVQSLTESTIAATTKIITSNPNF 398
                          QE+ + P++Q  N      P P  Q L +  IAA TK I S+P+F
Sbjct: 460 YNRNHTGSQNSGRHTQENFFHPHVQKNN------PAPVQQPLPD-PIAAATKAIASDPSF 512

Query: 399 QSALAAAISSYIG-----QQNVGGPGESSSLDMKCGKPNFSIKSAADSSAQNGTLGFASS 453
           QSALAAA++S +G       N  G GE+    +  G  +    S   S+++    G ASS
Sbjct: 513 QSALAAALTSIMGANGGTHANHSG-GEAFGQKLMWGSESLPAVSTYQSTSKGN--GCASS 569

Query: 454 LLDKYLPSSTHQQPAVSIFPLNSPPFSASKTALGSPVEVKDHV 496
            L+K  P  T+ QP   +F   + PFS SK A  SP E ++H 
Sbjct: 570 YLNKSPP--TNSQPGSLMFLPPALPFSTSKNASASPAENREHT 610

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297734011|emb|CBI15258.3| unnamed protein product [Vitis vinifera]

 Score =  311 bits (796), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 241/523 (46%), Positives = 317/523 (60%), Gaps = 65/523 (12%)

Query: 1   MAKDYQSLQSHFLDILQQEEAQKSKDKISTHHDQENEEVDELVSLSLGRTSAQPKKDEKK 60
           + KDY++LQ  F D+++QE A++S +K S    +E     E VSLSLGR S+ PKKDEK 
Sbjct: 120 IMKDYKTLQMQFYDVVRQE-AKESTEKASILQIEE----PEFVSLSLGRVSSDPKKDEKN 174

Query: 61  ICNNLSDGHEKNDKEGLALGLDCSRFEFSSNSRESENRPSPANTTCEQLKEQEPTEIWSP 120
                S   +   K GL+LGLDC +FE  +        PSP N+      ++   E W P
Sbjct: 175 --KTTSKVEDDGVKGGLSLGLDC-KFEVLN--------PSPENSFGG--PKEAAGESWPP 221

Query: 121 SKINIKSKRSDDQDEEVFQKAQLKKARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPR 180
           SK ++K+ R+ D  +E+ Q+   K+ RVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPR
Sbjct: 222 SK-SLKTMRTGD--DEISQQNPAKRCRVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPR 278

Query: 181 AYYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNHPLPISATAMASTTSAAASMLQCR 240
           AYYRCT++P+CPVRKQVQR+ EDMSILITTYEGTHNHPLP SATAMASTTSAAASML   
Sbjct: 279 AYYRCTVAPSCPVRKQVQRFAEDMSILITTYEGTHNHPLPYSATAMASTTSAAASMLMSG 338

Query: 241 SSTSQLGTSVS--VSTPPNLHGLNFIFSENARPHDQLNFSSSSISNTNAHPTIVLDLTAP 298
           SS+SQ G+      +T  +LHG+NF  S+N++   Q    +SS+S  +++PTI LDLT  
Sbjct: 339 SSSSQSGSGSCPLSATSADLHGVNFYLSDNSK-SKQFYSINSSLSAVSSNPTITLDLTTA 397

Query: 299 ----ATFSHFNRLSSS--APRYNSSSTSLNFSSPFSTNSLQTSWSSGYSNNYANYLGKQP 352
               ++ SHFNRLSS+   PR+ S+  + + S    +NSL  SWS+G   +Y +    QP
Sbjct: 398 SSSSSSSSHFNRLSSNYPPPRFPSTGFNFSSS---ESNSLPISWSNGLL-SYGSTTTTQP 453

Query: 353 --------------AQEHIYKPYMQMMNNPRTPPPIPQVQSLTESTIAATTKIITSNPNF 398
                          QE+ + P++Q  N      P P  Q L +  IAA TK I S+P+F
Sbjct: 454 YNRNHTGSQNSGRHTQENFFHPHVQKNN------PAPVQQPLPD-PIAAATKAIASDPSF 506

Query: 399 QSALAAAISSYIG-----QQNVGGPGESSSLDMKCGKPNFSIKSAADSSAQNGTLGFASS 453
           QSALAAA++S +G       N  G GE+    +  G  +    S   S+++    G ASS
Sbjct: 507 QSALAAALTSIMGANGGTHANHSG-GEAFGQKLMWGSESLPAVSTYQSTSKGN--GCASS 563

Query: 454 LLDKYLPSSTHQQPAVSIFPLNSPPFSASKTALGSPVEVKDHV 496
            L+K  P  T+ QP   +F   + PFS SK A  SP E ++H 
Sbjct: 564 YLNKSPP--TNSQPGSLMFLPPALPFSTSKNASASPAENREHT 604

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255552876|ref|XP_002517481.1| WRKY transcription factor, putative [Ricinus communis] gi|223543492|gb|EEF45023.1| WRKY transcription factor, putative [Ricinus communis]

 Score =  305 bits (780), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 242/520 (46%), Positives = 309/520 (59%), Gaps = 67/520 (12%)

Query: 1   MAKDYQSLQSHFLDILQQEEAQKSKDKISTHHDQENEEVDELVSLSLGRTS--AQPKKDE 58
           + KDYQSL   F +I QQE  +KS D   ++H++  E   ELVSL LGRT    +PKKDE
Sbjct: 81  VEKDYQSLMLRFFNIFQQETCKKSSDSTPSNHNETEEH--ELVSLCLGRTPPPCEPKKDE 138

Query: 59  KKICNNLSDGHEKND--KEGLALGLDCSRFEFSSNSRESENRPSPANTTCEQLKEQEPTE 116
           K+  +N S    +++  K  L+LGLD +  E  SN       PS  N+  E++KE E  E
Sbjct: 139 KQSGSNSSKSCREDEELKAKLSLGLDAT--ELVSN-------PSSGNS-LEEVKEDEAGE 188

Query: 117 IWSPSKINIKSKRSDDQDEEVFQKAQLKKARVSVRARCDTPTMNDGCQWRKYGQKIAKGN 176
            W PSK+N   KRS   D+EV Q++ +K+ARV VRARCDTPTMNDGCQWRKYGQKI+KGN
Sbjct: 189 TWPPSKVN--PKRS--IDDEVAQQSNVKRARVCVRARCDTPTMNDGCQWRKYGQKISKGN 244

Query: 177 PCPRAYYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNHPLPISATAMASTTSAAASM 236
           PCPRAYYRCT++P CPVRKQVQR  EDMSILITTYEGTHNHPLP++ATAMASTTSAAASM
Sbjct: 245 PCPRAYYRCTVAPACPVRKQVQRCAEDMSILITTYEGTHNHPLPVTATAMASTTSAAASM 304

Query: 237 LQCRSSTSQLGTS--VSVSTPP---NLHGLNFIFSENARPHDQLNFSSSSISNTNAHPTI 291
           L   SS+SQ G +   + +TP    +L+GLNF   +N+R   Q   ++ S   +   PTI
Sbjct: 305 LLSGSSSSQPGVTSHATFATPATHDHLNGLNFSLHDNSRT-KQFYLANPS---SPLFPTI 360

Query: 292 VLDL----TAPATFSHFNRLSSSAPRYNSSSTSLNFSSPFSTNSLQTSWSSGYS-----N 342
            LDL    ++ ++ + FNRL SS       STSLNFSS  S+  L T W +GY       
Sbjct: 361 TLDLTTSPSSTSSTTPFNRLFSSTSSSRFPSTSLNFSSAESS-ILPTVWGNGYQSYNSIG 419

Query: 343 NYANYLGKQPAQEHIYKPYMQMMNNPRTPPPIPQVQSLTESTIAATTKIITSNPNFQSAL 402
           +  + LGKQ  Q  +Y+P                 Q+LTE+     TK ITS+P+F++ +
Sbjct: 420 SLVSSLGKQNHQ--MYQPATASQ------------QALTET----LTKAITSDPSFRTVI 461

Query: 403 AAAISSYIGQQ-------NVGGPGESSSLDMKCGKPNFSIKSAADSSAQNGTLGFASSLL 455
           AAAISS +G         + G   ES    +K G+PN    S  +S  QNG    ASS  
Sbjct: 462 AAAISSVMGSSTGASASPSKGVVAESFGQSLKLGEPNNQANSTINSLTQNGKGSCASSYF 521

Query: 456 DKYLPSSTHQQPAVSIFPLNSPPFSASKTALGSPVEVKDH 495
           +  L SST Q    S+    + PFS   +A  S    KDH
Sbjct: 522 NG-LSSSTSQMG--SLLQSAALPFSIFNSAPTSTNNDKDH 558

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356507162|ref|XP_003522339.1| PREDICTED: LOW QUALITY PROTEIN: probable WRKY transcription factor 72-like [Glycine max]

 Score =  303 bits (775), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 237/538 (44%), Positives = 307/538 (57%), Gaps = 77/538 (14%)

Query: 4   DYQSLQSHFLDILQQEEAQKSKDKISTHHDQENEEVDELVSLSLGRTSAQPKKDEKKICN 63
           DY++LQ  F + ++QE    S  K++ ++D + EE D LVSLSLGR    P ++ +K+ N
Sbjct: 94  DYRTLQMQFHNRVEQETKDSSDQKVNNNNDHQREESD-LVSLSLGRL---PTRNNEKVNN 149

Query: 64  NLSDGHEKNDKEGLALGLDCSRFEFSSNSRESENRP--SPANTTCEQLKEQEPTEIWSPS 121
                 EK DKEGL+LGLDC +FE S +   +E+ P  SP N+  E  KE+   E W P 
Sbjct: 150 KPLKEEEKEDKEGLSLGLDC-KFETSKSGSTTEHLPNQSPNNSVEEVPKEEAAGESW-PQ 207

Query: 122 KINIKSKRSDDQDEEVFQKAQLKKARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRA 181
           +   K+ R    ++EV Q+   KKARV VRARC T TMNDGCQWRKYGQKI+KGNPCPRA
Sbjct: 208 RKGHKTARDTTGEDEVSQQNPAKKARVCVRARCGTATMNDGCQWRKYGQKISKGNPCPRA 267

Query: 182 YYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNHPLPISATAMASTTSAAASML---- 237
           YYRCT++P+CPVRKQVQR  +DMSIL+TTYEG HNHPLP+SATAMAST SAAASML    
Sbjct: 268 YYRCTVAPSCPVRKQVQRCAQDMSILMTTYEGNHNHPLPLSATAMASTISAAASMLLSGS 327

Query: 238 -----QCRSSTSQLGTSVSVSTPPNLHGLNFIFSENARPHDQLNFSSSSISNTNAHPTIV 292
                  R ST+ + T+ S  T PN    N   S  A           ++S++ +HPTI 
Sbjct: 328 STSHSGSRPSTA-MTTAASYQTVPNQS--NTYLSHPA-----------ALSSSPSHPTIT 373

Query: 293 LDLT---------APATFSHFNRLSSSAPRYNSSSTSLNFSSPFSTNSLQTSWSSG---- 339
           LDLT          P      N   ++  RY   STSLNFS   S N+  TSWS+     
Sbjct: 374 LDLTSNNNPSSSSVPLVKFTSNSTFNNPQRY-PLSTSLNFSYSESNNA--TSWSNNGFLS 430

Query: 340 YSN--------NYANY-----LGKQPAQ--EHIYKPYMQMMNNPRTPPPIPQVQSLTEST 384
           Y+N        N  N      LGKQ  +  E+IY  Y+Q  NN      IP  Q     T
Sbjct: 431 YNNTLPYNSNRNVTNVLSNINLGKQQQRPLENIYNSYLQRNNNINP---IPPPQHSLPDT 487

Query: 385 IAATTKIITSNPNFQSALAAAISSYIG-------QQNVGGPGESSSLDMKCGKPNFSIKS 437
           IAA TK+IT++PN QSALAAA+++ IG       Q + G   E+ S  MK G+  F   S
Sbjct: 488 IAAATKVITADPNCQSALAAALTTIIGSGTGNTTQGSHGAAXENLSQQMKWGEL-FPSSS 546

Query: 438 AADSSAQNGTLGFASSLLDKYLPSSTHQQPAVSIFPLNS-PPFSASKTALGSPVEVKD 494
           +A  S+     G ASS L+K   S+ + +P  ++  L    P S+ K+A GSP + +D
Sbjct: 547 SALPSSSTKVNGCASSFLNK---SAANTKPGTTLMFLQPLLPLSSPKSASGSPGDHRD 601

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	498
TAIR|locus:2034964	480	WRKY61 "WRKY DNA-binding prote	0.586	0.608	0.411	9.9e-56
TAIR|locus:2150876	548	WRKY72 "WRKY DNA-binding prote	0.883	0.802	0.347	7.8e-55
TAIR|locus:2018052	553	WRKY6 [Arabidopsis thaliana (t	0.379	0.341	0.456	2.3e-49
TAIR|locus:2196779	387	WRKY36 "WRKY DNA-binding prote	0.542	0.697	0.356	6.7e-45
TAIR|locus:2133432	489	WRKY47 [Arabidopsis thaliana (	0.345	0.351	0.472	1.2e-43
TAIR|locus:2137179	528	WRKY42 [Arabidopsis thaliana (	0.301	0.284	0.487	1.3e-42
TAIR|locus:2120623	538	WRKY31 "WRKY DNA-binding prote	0.331	0.306	0.477	8.7e-42
TAIR|locus:2199317	374	WRKY9 "WRKY DNA-binding protei	0.341	0.454	0.474	2.5e-41
TAIR|locus:2124874	310	WRKY18 "WRKY DNA-binding prote	0.160	0.258	0.537	8.1e-26
TAIR|locus:2025687	302	WRKY40 "WRKY DNA-binding prote	0.176	0.291	0.488	9.4e-26

TAIR|locus:2034964 WRKY61 "WRKY DNA-binding protein 61" [Arabidopsis thaliana (taxid:3702)]

 Score = 536 (193.7 bits), Expect = 9.9e-56, Sum P(2) = 9.9e-56
 Identities = 137/333 (41%), Positives = 179/333 (53%)

Query:     3 KDYQSLQSHFLDILQQEEAQKSKDKISTHH-----DQENEEV---DELVSLSLGR--TSA 52
             KD+  LQ+ +  ++ +   + +K +   HH     D++ E+V   +ELVSLSLGR   S 
Sbjct:    20 KDFDILQTQYNQLMAKHN-EPTKFQSKGHHQDKGEDEDREKVNEREELVSLSLGRRLNSE 78

Query:    53 QPK---KDEK-KICNNLS-----DGHEKNDKEGLALGLDCXXXXXXXXXXXXXXXXXXAN 103
              P    K+EK K           D +EK+  +GL++G++                    N
Sbjct:    79 VPSGSNKEEKNKDVEEAEGDRNYDDNEKSSIQGLSMGIEYKALSNPNEKLEIDH-----N 133

Query:   104 TTCEQLKEQEPTEIWSPSKINIKSKRSDDQDE-EVFQKAQLKKARVSVRARCDTPTMNDG 162
                  L+     +I S +    K+   D +DE E+  +  +KK RVSVR+RC+TPTMNDG
Sbjct:   134 QETMSLEISNNNKIRSQNSFGFKNDGDDHEDEDEILPQNLVKKTRVSVRSRCETPTMNDG 193

Query:   163 CQWRKYGQKIAKGNPCPRAYYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNHPLPIX 222
             CQWRKYGQKIAKGNPCPRAYYRCTI+ +CPVRKQVQR  EDMSILI+TYEGTHNHPLP+ 
Sbjct:   194 CQWRKYGQKIAKGNPCPRAYYRCTIAASCPVRKQVQRCSEDMSILISTYEGTHNHPLPMS 253

Query:   223 XXXXXXXXXXXXXXLQCRSSTSQLGTSVSVSTPPNLHGLNFIFS-ENARPHDQLNFSSSS 281
                           L         G S S S   +LHGLNF  S  N  P  + +F  S 
Sbjct:   254 ATAMASATSAAASMLLS-------GASSSSSAAADLHGLNFSLSGNNITPKPKTHFLQSP 306

Query:   282 ISNTNAHPTIVLDLTAPAT-----FSHFNRLSS 309
              S+   HPT+ LDLT  ++      S  NR SS
Sbjct:   307 SSS--GHPTVTLDLTTSSSSQQPFLSMLNRFSS 337

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0010043 "response to zinc ion" evidence=RCA

TAIR|locus:2150876 WRKY72 "WRKY DNA-binding protein 72" [Arabidopsis thaliana (taxid:3702)]

 Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
 Identities = 179/515 (34%), Positives = 246/515 (47%)

Query:     4 DYQSLQSHFLDILQQEE---AQKSKDKIS----THHDQEN-EEVDELVSLSLGRTSAQP- 54
             DY+SL+  F DI+QQE    A K+++ +     T  D  + ++  ELVSLSLGR S+ P 
Sbjct:    63 DYKSLKLRFFDIIQQEPSNTATKNQNMVDHPKPTTTDLSSFDQERELVSLSLGRRSSSPS 122

Query:    55 ----KKDEKKICNNLS-DGHEKNDKEGLALGLDCXXXXXXXXXXXXXXXXXXANTTCEQL 109
                 KK+EK    +   +  E+  K GL LG++                   AN+  E  
Sbjct:   123 DSVPKKEEKTDAISAEVNADEELTKAGLTLGIN---NGNGGEPKEGLSMENRANSGSE-- 177

Query:   110 KEQEPTEIWSPSKINIKSKRSD-------DQDEEVFQKAQLKKARVSVRARCDTPTMNDG 162
                   E W+P K+    KRS        D D E  Q+  +K+ARV VRARCDTPTMNDG
Sbjct:   178 ------EAWAPGKVT--GKRSSPAPASGGDADGEAGQQNHVKRARVCVRARCDTPTMNDG 229

Query:   163 CQWRKYGQKIAKGNPCPRAYYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNHPLPIX 222
             CQWRKYGQKIAKGNPCPRAYYRCT++P CPVRKQVQR  +DMSILITTYEGTH+H LP+ 
Sbjct:   230 CQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCADDMSILITTYEGTHSHSLPLS 289

Query:   223 XXXXXXXXXXXXXXLQCRSSTSQLGTSVSVSTPPNLHGLNFIFSENARPHDQLNFSSSSI 282
                           L   SS+S     +      NL+  N  F+ N +     +F S ++
Sbjct:   290 ATTMASTTSAAASMLLSGSSSSPAAEMIG----NNLYD-NSRFNNNNK-----SFYSPTL 339

Query:   283 SNTNAHPTIVLDLTAPATFS---------HFNRLSSSAPRYNXXXXXXXXXXXXXXXXXQ 333
              ++  HPT+ LDLTAP   S         +FN+ S+S  R+                   
Sbjct:   340 -HSPLHPTVTLDLTAPQHSSSSSSSLLSLNFNKFSNSFQRFPSTSLNFSSTSSTSSNPST 398

Query:   334 TSWSSGYSNNYANYLGKQPAQEHIYKPYMQMM-NNPRTPPPIPQVQSLXXXXXXXXXXXX 392
              +  + + N Y++Y    P     Y PY  +          +   QSL            
Sbjct:   399 LNLPAIWGNGYSSYT---P-----Y-PYNNVQFGTSNLGKTVQNSQSLTETLTKALTS-- 447

Query:   393 XXNPNFQSALAAAISSYIG---QQNVGGPGESSSLDMKCGKPNFSIKSAAD--SSAQNGT 447
               +P+F S +AAAIS+ +G   +Q + GP  S S +++      + K      SS     
Sbjct:   448 --DPSFHSVIAAAISTMVGSNGEQQIVGPRHSISNNIQQTNTTNNNKGCGGYFSSLLMSN 505

Query:   448 LGFASSLLDKYLPSSTHQQPAVSIFPLNSPPFSAS 482
             +  AS+     L   + Q P  S+F  NS   S++
Sbjct:   506 I-MASNQTGASLDQPSSQLPPFSMFK-NSSSSSST 538

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0006952 "defense response" evidence=IMP

TAIR|locus:2018052 WRKY6 [Arabidopsis thaliana (taxid:3702)]

 Score = 389 (142.0 bits), Expect = 2.3e-49, Sum P(4) = 2.3e-49
 Identities = 95/208 (45%), Positives = 118/208 (56%)

Query:   110 KEQEP-TEIWSPSKINIKSKRSDDQDEEVFQKAQLKKARVSVRARCDTPTMNDGCQWRKY 168
             +E+ P TE     K+N  +  + DQ  E    A ++KARVSVRAR + P ++DGCQWRKY
Sbjct:   265 REESPETESNKIQKVNSTTPTTFDQTAE----ATMRKARVSVRARSEAPMISDGCQWRKY 320

Query:   169 GQKIAKGNPCPRAYYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNHPLPIXXXXXXX 228
             GQK+AKGNPCPRAYYRCT++  CPVRKQVQR  ED SILITTYEG HNHPLP        
Sbjct:   321 GQKMAKGNPCPRAYYRCTMATGCPVRKQVQRCAEDRSILITTYEGNHNHPLPPAAVAMAS 380

Query:   229 XXXXXXXXLQCRSSTSQLGTSVSVSTPPNLHGLNFIFSENARPHDQLNFSSSSISNTNAH 288
                     L   S +S  G    +  P NL          AR     + S ++IS +   
Sbjct:   381 TTTAAANMLLSGSMSSHDG----MMNPTNLL---------ARAVLPCSTSMATISASAPF 427

Query:   289 PTIVLDLT-APATFSHFNRLSSSAPRYN 315
             PT+ LDLT +P   +  N  SS+A   N
Sbjct:   428 PTVTLDLTHSPPPPNGSNPSSSAATNNN 455

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;IMP

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0005515 "protein binding" evidence=IPI

GO:0016036 "cellular response to phosphate starvation" evidence=IMP

GO:0044212 "transcription regulatory region DNA binding" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IMP

GO:0080169 "cellular response to boron-containing substance deprivation" evidence=IMP

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

GO:0043090 "amino acid import" evidence=RCA

TAIR|locus:2196779 WRKY36 "WRKY DNA-binding protein 36" [Arabidopsis thaliana (taxid:3702)]

 Score = 414 (150.8 bits), Expect = 6.7e-45, Sum P(2) = 6.7e-45
 Identities = 102/286 (35%), Positives = 144/286 (50%)

Query:     4 DYQSLQSHFLDILQQEEAQKSKDKISTHHDQENEEVDELVSLSLGRTSAQ-PKKDEKKIC 62
             +Y SLQ     +L Q++   S +        EN + D  +SL LGR+  +  KK+E K+ 
Sbjct:    53 NYNSLQMQVSKVLGQQQGASSMELDHIDRQDENNDYDVDISLRLGRSEQKISKKEENKVD 112

Query:    63 N-NLSDGHEKNDKEGLALGLDCXXXXXXXXXXXXXXXXXXANTTCEQLKEQEPTEIWSPS 121
               +  +  E  DK   ALG                      +  C Q+K          S
Sbjct:   113 KISTKNVEESKDKRS-ALGFG---------FQIQSYEASKLDDLCRQVKLANAENKCVSS 162

Query:   122 KINIKSKRSDDQDE--EVFQKAQLKKARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCP 179
             + ++KS R+++  +  E  ++  LKK RV V+A C+ P++NDGCQWRKYGQK AK NP P
Sbjct:   163 RKDVKSVRNENHQDVLEEHEQTGLKKTRVCVKASCEDPSINDGCQWRKYGQKTAKTNPLP 222

Query:   180 RAYYRCTISPTCPVRKQVQRW-HEDMSILITTYEGTHNHPLPIXXXXXXXXXXXXXXXLQ 238
             RAYYRC++S  CPVRKQVQR   E+ S  +TTYEG H+HPLP+               LQ
Sbjct:   223 RAYYRCSMSSNCPVRKQVQRCGEEETSAFMTTYEGNHDHPLPMEASHMAAGTSAAASLLQ 282

Query:   239 CRSSTSQLGTSVSVSTPPNLHGLNFIFSENARPHDQLNFSSSSISN 284
               SS+S   TS S+S     H  + I + N+ P   L+ +  +  N
Sbjct:   283 SGSSSSSSSTSASLSYFFPFHHFS-ISTTNSHPTVTLDLTRPNYPN 327

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0015698 "inorganic anion transport" evidence=RCA

TAIR|locus:2133432 WRKY47 [Arabidopsis thaliana (taxid:3702)]

 Score = 389 (142.0 bits), Expect = 1.2e-43, Sum P(3) = 1.2e-43
 Identities = 86/182 (47%), Positives = 108/182 (59%)

Query:   119 SPSKINIKSKRSDDQDEEVFQKAQL--KKARVSVRARCDTPTMNDGCQWRKYGQKIAKGN 176
             SP    I   +S + +E+     QL  +KARVSVRAR D  T+NDGCQWRKYGQK+AKGN
Sbjct:   196 SPKTPRIDQNKSTNHEEQQNPHDQLPYRKARVSVRARSDATTVNDGCQWRKYGQKMAKGN 255

Query:   177 PCPRAYYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNHPLPIXXXXXXXXXXXXXXX 236
             PCPRAYYRCT++  CPVRKQVQR  ED +IL TTYEG HNHPLP                
Sbjct:   256 PCPRAYYRCTMAVGCPVRKQVQRCAEDTTILTTTYEGNHNHPLPPSATAMAATTSAAAAM 315

Query:   237 LQCRSSTSQLGTSVSVSTPPNLHGLNFIFSENARPHDQLNFSSSSISNTNAHPTIVLDLT 296
             L   SS+S L  ++S  +P      +F  +    P+     + +++S +   PTI LDLT
Sbjct:   316 LLSGSSSSNLHQTLS--SPSATSSSSFYHNF---PYTS---TIATLSASAPFPTITLDLT 367

Query:   297 AP 298
              P
Sbjct:   368 NP 369

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0006857 "oligopeptide transport" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2137179 WRKY42 [Arabidopsis thaliana (taxid:3702)]

 Score = 369 (135.0 bits), Expect = 1.3e-42, Sum P(3) = 1.3e-42
 Identities = 79/162 (48%), Positives = 97/162 (59%)

Query:   135 EEVFQKAQLKKARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTISPTCPVR 194
             E+   +A ++KARVSVRAR + P ++DGCQWRKYGQK+AKGNPCPRAYYRCT++  CPVR
Sbjct:   267 EQAAAEATMRKARVSVRARSEAPMLSDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVR 326

Query:   195 KQVQRWHEDMSILITTYEGTHNHPLPIXXXXXXXXXXXXXXXLQCRSSTSQLGTSVSVST 254
             KQVQR  ED +ILITTYEG HNHPLP                L    S S +     +  
Sbjct:   327 KQVQRCAEDRTILITTYEGNHNHPLPPAAMNMASTTTAAASMLL---SGSTMSNQDGLMN 383

Query:   255 PPNLHGLNFIFSENARPHDQLNFSSSSISNTNAHPTIVLDLT 296
             P NL       +    P    + S ++IS +   PTI LDLT
Sbjct:   384 PTNL------LARTILP---CSSSMATISASAPFPTITLDLT 416

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IMP

TAIR|locus:2120623 WRKY31 "WRKY DNA-binding protein 31" [Arabidopsis thaliana (taxid:3702)]

 Score = 380 (138.8 bits), Expect = 8.7e-42, Sum P(3) = 8.7e-42
 Identities = 85/178 (47%), Positives = 105/178 (58%)

Query:   119 SPSKINIKSKRSDDQDEEVFQKAQLKKARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPC 178
             +PS  N    R+ +  ++   +A ++KARVSVRAR +   ++DGCQWRKYGQK+AKGNPC
Sbjct:   256 NPSSSNSNGNRNGNVIDQSAAEATMRKARVSVRARSEAAMISDGCQWRKYGQKMAKGNPC 315

Query:   179 PRAYYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNHPLPIXXXXXXXXXXXXXXXLQ 238
             PRAYYRCT++  CPVRKQVQR  ED SILITTYEG HNHPLP                L 
Sbjct:   316 PRAYYRCTMAGGCPVRKQVQRCAEDRSILITTYEGNHNHPLPPAATAMASTTTAAASMLL 375

Query:   239 CRSSTSQLGTSVSVSTPPNLHGLNFIFSENARPHDQLNFSSSSISNTNAHPTIVLDLT 296
               S +SQ G    +  P NL          AR     + S ++IS +   PTI LDLT
Sbjct:   376 SGSMSSQDG----LMNPTNLL---------ARAILPCSSSMATISASAPFPTITLDLT 420

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

TAIR|locus:2199317 WRKY9 "WRKY DNA-binding protein 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 396 (144.5 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
 Identities = 84/177 (47%), Positives = 101/177 (57%)

Query:   110 KEQEPTEIWSPSKINIKSKRSDDQDEEVFQKAQ-LKKARVSVRARCDTPTMNDGCQWRKY 168
             K++E  E          S   D     +   +Q  +KARVSVRARC+T TMNDGCQWRKY
Sbjct:   184 KQEESKEAVQSHHQRYNSSSLDMNMPRIISSSQGNRKARVSVRARCETATMNDGCQWRKY 243

Query:   169 GQKIAKGNPCPRAYYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNHPLPIXXXXXXX 228
             GQK AKGNPCPRAYYRCT++P CPVRKQVQR  EDMSILITTYEGTHNHPLP+       
Sbjct:   244 GQKTAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPLPVGATAMAS 303

Query:   229 XXXXXXXXLQCRSSTSQLGTSVSVSTPPNLHGLNFIFSENARPHDQ----LNFSSSS 281
                     L    S+  L       TP  +      + +N+  +++    LNF   S
Sbjct:   304 TASTSPFLLL--DSSDNLSHPSYYQTPQAIDSSLITYPQNSSYNNRTIRSLNFDGPS 358

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010043 "response to zinc ion" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2124874 WRKY18 "WRKY DNA-binding protein 18" [Arabidopsis thaliana (taxid:3702)]

 Score = 250 (93.1 bits), Expect = 8.1e-26, Sum P(3) = 8.1e-26
 Identities = 43/80 (53%), Positives = 57/80 (71%)

Query:   138 FQKAQLKKARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTISPTCPVRKQV 197
             F KA++    V       + T+ DG QWRKYGQK+ + NP PRAY+RC+ +P+CPV+K+V
Sbjct:   154 FNKAKVSTVYVPTETSDTSLTVKDGFQWRKYGQKVTRDNPSPRAYFRCSFAPSCPVKKKV 213

Query:   198 QRWHEDMSILITTYEGTHNH 217
             QR  ED S+L+ TYEGTHNH
Sbjct:   214 QRSAEDPSLLVATYEGTHNH 233

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;IMP;IDA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0031347 "regulation of defense response" evidence=IMP

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0005515 "protein binding" evidence=IPI

GO:0042802 "identical protein binding" evidence=IPI

GO:0050832 "defense response to fungus" evidence=IEP

GO:0050691 "regulation of defense response to virus by host" evidence=IGI

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0002237 "response to molecule of bacterial origin" evidence=IMP

TAIR|locus:2025687 WRKY40 "WRKY DNA-binding protein 40" [Arabidopsis thaliana (taxid:3702)]

 Score = 250 (93.1 bits), Expect = 9.4e-26, Sum P(2) = 9.4e-26
 Identities = 43/88 (48%), Positives = 58/88 (65%)

Query:   133 QDEEVFQKAQLKKARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTISPTCP 192
             Q EE   K ++ +      A   T  + DG QWRKYGQK+ + NP PRAY++C  +P+C 
Sbjct:   119 QREETVVKEKVSRVYYKTEASDTTLVVKDGYQWRKYGQKVTRDNPSPRAYFKCACAPSCS 178

Query:   193 VRKQVQRWHEDMSILITTYEGTHNHPLP 220
             V+K+VQR  ED S+L+ TYEG HNHP+P
Sbjct:   179 VKKKVQRSVEDQSVLVATYEGEHNHPMP 206

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;IDA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0031347 "regulation of defense response" evidence=RCA;IMP

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0042742 "defense response to bacterium" evidence=IEP;RCA

GO:0050832 "defense response to fungus" evidence=IEP;RCA

GO:0050691 "regulation of defense response to virus by host" evidence=IGI

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0005515 "protein binding" evidence=IPI

GO:0002237 "response to molecule of bacterial origin" evidence=IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009612 "response to mechanical stimulus" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009646 "response to absence of light" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0016045 "detection of bacterium" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0050776 "regulation of immune response" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	498
smart00774	59	smart00774, WRKY, DNA binding domain	1e-31
pfam03106	60	pfam03106, WRKY, WRKY DNA -binding domain	1e-31

>gnl|CDD|214815 smart00774, WRKY, DNA binding domain

 Score =  115 bits (291), Expect = 1e-31
 Identities = 35/58 (60%), Positives = 44/58 (75%)

Query: 160 NDGCQWRKYGQKIAKGNPCPRAYYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNH 217
           +DG QWRKYGQK+ KG+P PR+YYRCT +  CP +KQVQR  +D S++  TYEG H H
Sbjct: 2   DDGYQWRKYGQKVIKGSPYPRSYYRCTYTQGCPAKKQVQRSDDDPSVVEVTYEGEHTH 59

The WRKY domain is a DNA binding domain found in one or two copies in a superfamily of plant transcription factors. These transcription factors are involved in the regulation of various physiological programs that are unique to plants, including pathogen defense, senescence and trichome development. The domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger-like motif. It binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core is essential for function and WRKY binding. Length = 59

>gnl|CDD|145969 pfam03106, WRKY, WRKY DNA -binding domain

 Score =  115 bits (290), Expect = 1e-31
 Identities = 38/61 (62%), Positives = 46/61 (75%), Gaps = 1/61 (1%)

Query: 159 MNDGCQWRKYGQKIAKGNPCPRAYYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNHP 218
           ++DG  WRKYGQK  KG+P PR+YYRCT SP CPV+KQV+R  +D  I+  TYEG HNHP
Sbjct: 1   LDDGYNWRKYGQKPVKGSPFPRSYYRCT-SPGCPVKKQVERSSDDPQIVEITYEGEHNHP 59

Query: 219 L 219
            
Sbjct: 60  K 60

Length = 60

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	498
PF03106	60	WRKY: WRKY DNA -binding domain; InterPro: IPR00365	99.96
smart00774	59	WRKY DNA binding domain. The WRKY domain is a DNA	99.96
PF03101	91	FAR1: FAR1 DNA-binding domain; InterPro: IPR004330	93.55
PF04500	62	FLYWCH: FLYWCH zinc finger domain; InterPro: IPR00	91.6

>PF03106 WRKY: WRKY DNA -binding domain; InterPro: IPR003657 The WRKY domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger- like motif

Probab=99.96  E-value=1.1e-30  Score=206.83  Aligned_cols=60  Identities=62%  Similarity=1.169  Sum_probs=52.3

Q ss_pred             CCCCcccccccccccCCCCCCCCccccCCCCCCccccceeeecCCCcEEEEEEccccCCCC
Q 010903          159 MNDGCQWRKYGQKIAKGNPCPRAYYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNHPL  219 (498)
Q Consensus       159 ~~DGy~WRKYGQK~iKgn~~PRsYYRCT~s~gC~arKqVQr~~dD~~i~~ttY~G~HnH~~  219 (498)
                      ++|||+|||||||.|+|+++||+||||++. +|+|+|+|||+.+|+.+++|||+|+|||+.
T Consensus         1 ~~Dgy~WRKYGqK~i~g~~~pRsYYrCt~~-~C~akK~Vqr~~~d~~~~~vtY~G~H~h~k   60 (60)
T PF03106_consen    1 LDDGYRWRKYGQKNIKGSPYPRSYYRCTHP-GCPAKKQVQRSADDPNIVIVTYEGEHNHPK   60 (60)
T ss_dssp             --SSS-EEEEEEEEETTTTCEEEEEEEECT-TEEEEEEEEEETTCCCEEEEEEES--SS--
T ss_pred             CCCCCchhhccCcccCCCceeeEeeecccc-ChhheeeEEEecCCCCEEEEEEeeeeCCCC
Confidence            479999999999999999999999999995 999999999999999999999999999974

The WRKY domain is found in one or two copies in a superfamily of plant transcription factors involved in the regulation of various physiological programs that are unique to plants, including pathogen defence, senescence, trichome development and the biosynthesis of secondary metabolites. The WRKY domain binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core of the W box is essential for function and WRKY binding []. Some proteins known to contain a WRKY domain include Arabidopsis thaliana ZAP1 (Zinc-dependent Activator Protein-1) and AtWRKY44/TTG2, a protein involved in trichome development and anthocyanin pigmentation; and wild oat ABF1-2, two proteins involved in the gibberelic acid-induced expression of the alpha-Amy2 gene. Structural studies indicate that this domain is a four-stranded beta-sheet with a zinc binding pocket, forming a novel zinc and DNA binding structure []. The WRKYGQK residues correspond to the most N-terminal beta-strand, which enables extensive hydrophobic interactions, contributing to the structural stability of the beta-sheet.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2AYD_A 1WJ2_A 2LEX_A.

>smart00774 WRKY DNA binding domain

Probab=99.96  E-value=2.9e-30  Score=204.52  Aligned_cols=59  Identities=61%  Similarity=1.166  Sum_probs=57.1

Q ss_pred             CCCCcccccccccccCCCCCCCCccccCCCCCCccccceeeecCCCcEEEEEEccccCC
Q 010903          159 MNDGCQWRKYGQKIAKGNPCPRAYYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNH  217 (498)
Q Consensus       159 ~~DGy~WRKYGQK~iKgn~~PRsYYRCT~s~gC~arKqVQr~~dD~~i~~ttY~G~HnH  217 (498)
                      .+|||+|||||||.|+|+++||+|||||+.++|+|+|+|||+++|+.+++|||+|+|||
T Consensus         1 ~~DGy~WRKYGQK~ikgs~~pRsYYrCt~~~~C~a~K~Vq~~~~d~~~~~vtY~g~H~h   59 (59)
T smart00774        1 LDDGYQWRKYGQKVIKGSPFPRSYYRCTYSQGCPAKKQVQRSDDDPSVVEVTYEGEHTH   59 (59)
T ss_pred             CCCcccccccCcEecCCCcCcceEEeccccCCCCCcccEEEECCCCCEEEEEEeeEeCC
Confidence            37999999999999999999999999999779999999999999999999999999998

The WRKY domain is a DNA binding domain found in one or two copies in a superfamily of plant transcription factors. These transcription factors are involved in the regulation of various physiological programs that are unique to plants, including pathogen defense, senescence and trichome development. The domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger-like motif. It binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core is essential for function and WRKY binding.

>PF03101 FAR1: FAR1 DNA-binding domain; InterPro: IPR004330 Phytochrome A is the primary photoreceptor for mediating various far-red light-induced responses in higher plants

Probab=93.55  E-value=0.053  Score=44.40  Aligned_cols=31  Identities=35%  Similarity=0.531  Sum_probs=27.1

Q ss_pred             CCCccccceeeecCCCcEEEEEEccccCCCCC
Q 010903          189 PTCPVRKQVQRWHEDMSILITTYEGTHNHPLP  220 (498)
Q Consensus       189 ~gC~arKqVQr~~dD~~i~~ttY~G~HnH~~P  220 (498)
                      .+|+|+=.|.+.. |....++.+..+|||++-
T Consensus        60 tgC~a~i~v~~~~-~~~w~v~~~~~~HNH~L~   90 (91)
T PF03101_consen   60 TGCKARINVKRRK-DGKWRVTSFVLEHNHPLC   90 (91)
T ss_pred             cCCCEEEEEEEcc-CCEEEEEECcCCcCCCCC
Confidence            5999999998776 777888999999999874

It has been found that the proteins governing this response, which include FAR-RED ELONGATED HYPOCOTYL3 (FHY3) and FAR-RED-IMPAIRED RESPONSE1 (FAR1), are a pair of homologous proteins sharing significant sequence homology to mutator-like transposases. These proteins appear to be novel transcription factors, which are essential for activating the expression of FHY1 and FHL (for FHY1-like) and related genes, whose products are required for light-induced phytochrome A nuclear accumulation and subsequent light responses in plants. The FRS (FAR1 Related Sequences) family of proteins share a similar domain structure to mutator-like transposases, including an N-terminal C2H2 zinc finger domain, a central putative core transposase domain, and a C-terminal SWIM motif (named after SWI2/SNF and MuDR transposases). It seems plausible that the FRS family represent transcription factors derived from mutator-like transposases [, ]. This entry represents a domain found in FAR1 and FRS proteins. It contains a WRKY like fold and is therefore most likely a zinc binding DNA-binding domain.

>PF04500 FLYWCH: FLYWCH zinc finger domain; InterPro: IPR007588 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=91.60  E-value=0.083  Score=39.76  Aligned_cols=49  Identities=24%  Similarity=0.457  Sum_probs=25.8

Q ss_pred             CCCCcccccccccccCCCCCCCCccccCCC--CCCccccceeeecCCCcEEEEEEccccCC
Q 010903          159 MNDGCQWRKYGQKIAKGNPCPRAYYRCTIS--PTCPVRKQVQRWHEDMSILITTYEGTHNH  217 (498)
Q Consensus       159 ~~DGy~WRKYGQK~iKgn~~PRsYYRCT~s--~gC~arKqVQr~~dD~~i~~ttY~G~HnH  217 (498)
                      +-|||.-+++...      ..+.|+||+..  .+|+|+=.+.  .++. .+ +...++|||
T Consensus        12 ~~~Gy~y~~~~~~------~~~~~WrC~~~~~~~C~a~~~~~--~~~~-~~-~~~~~~HnH   62 (62)
T PF04500_consen   12 VYDGYRYYFNKRN------DGKTYWRCSRRRSHGCRARLITD--AGDG-RV-VRTNGEHNH   62 (62)
T ss_dssp             EETTEEEEEEEE-------SS-EEEEEGGGTTS----EEEEE----TT-EE-EE-S---SS
T ss_pred             EECCeEEECcCCC------CCcEEEEeCCCCCCCCeEEEEEE--CCCC-EE-EECCCccCC
Confidence            4689888776555      34689999986  3799988886  3333 33 344599999

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. C2H2-type (classical) zinc fingers (Znf) were the first class to be characterised. They contain a short beta hairpin and an alpha helix (beta/beta/alpha structure), where a single zinc atom is held in place by Cys(2)His(2) (C2H2) residues in a tetrahedral array. C2H2 Znf's can be divided into three groups based on the number and pattern of fingers: triple-C2H2 (binds single ligand), multiple-adjacent-C2H2 (binds multiple ligands), and separated paired-C2H2 []. C2H2 Znf's are the most common DNA-binding motifs found in eukaryotic transcription factors, and have also been identified in prokaryotes []. Transcription factors usually contain several Znf's (each with a conserved beta/beta/alpha structure) capable of making multiple contacts along the DNA, where the C2H2 Znf motifs recognise DNA sequences by binding to the major groove of DNA via a short alpha-helix in the Znf, the Znf spanning 3-4 bases of the DNA []. C2H2 Znf's can also bind to RNA and protein targets []. This entry represents a potential FLYWCH Zn-finger domain found in a number of eukaryotic proteins. FLYWCH is a C2H2-type zinc finger characterised by five conserved hydrophobic residues, containing the conserved sequence motif: F/Y-X(n)-L-X(n)-F/Y-X(n)-WXCX(6-12)CX(17-22)HXH where X indicates any amino acid. This domain was first characterised in Drosophila Modifier of mdg4 proteins, Mod(mgd4), putative chromatin modulators involved in higher order chromatin domains. Mod(mdg4) proteins share a common N-terminal BTB/POZ domain, but differ in their C-terminal region, most containing C-terminal FLYWCH zinc finger motifs []. The FLYWCH domain in Mod(mdg4) proteins has a putative role in protein-protein interactions; for example, Mod(mdg4)-67.2 interacts with DNA-binding protein Su(Hw) via its FLYWCH domain. FLYWCH domains have been described in other proteins as well, including suppressor of killer of prune, Su(Kpn), which contains 4 terminal FLYWCH zinc finger motifs in a tandem array and a C-terminal glutathione SH-transferase (GST) domain []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 2RPR_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	498
2ayd_A	76	Crystal Structure Of The C-Terminal Wrky Domainof A		9e-18
1wj2_A	78	Solution Structure Of The C-Terminal Wrky Domain Of		2e-16

>pdb|2AYD|A Chain A, Crystal Structure Of The C-Terminal Wrky Domainof Atwrky1, An Sa-Induced And Partially Npr1-Dependent Transcription Factor Length = 76

Iteration: 1
 Score = 88.2 bits (217), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 40/75 (53%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 146 ARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTISPTCPVRKQVQRWHEDMS 205
           +R+ V  +     +NDG +WRKYGQK  KG+P PR+YYRC+ SP CPV+K V+R   D  
Sbjct: 1   SRIVVHTQTLFDIVNDGYRWRKYGQKSVKGSPYPRSYYRCS-SPGCPVKKHVERSSHDTK 59
Query: 206 ILITTYEGTHNHPLP 220
           +LITTYEG H+H +P
Sbjct: 60  LLITTYEGKHDHDMP 74

>pdb|1WJ2|A Chain A, Solution Structure Of The C-Terminal Wrky Domain Of Atwrky4 Length = 78

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/71 (53%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 150 VRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTISPTCPVRKQVQRWHEDMSILIT 209
           V+   +   ++DG +WRKYGQK+ KGNP PR+YY+CT +P C VRK V+R   D   ++T
Sbjct: 8   VQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCT-TPGCGVRKHVERAATDPKAVVT 66
Query: 210 TYEGTHNHPLP 220
           TYEG HNH LP
Sbjct: 67  TYEGKHNHDLP 77

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	498
2ayd_A	76	WRKY transcription factor 1; beta strands, zinc fi	100.0
1wj2_A	78	Probable WRKY transcription factor 4; DNA-binding	99.98

>2ayd_A WRKY transcription factor 1; beta strands, zinc finger; 1.60A {Arabidopsis thaliana}

Probab=100.00  E-value=3.7e-34  Score=235.42  Aligned_cols=74  Identities=53%  Similarity=1.027  Sum_probs=71.7

Q ss_pred             eEEEeecCCCCCCCCCcccccccccccCCCCCCCCccccCCCCCCccccceeeecCCCcEEEEEEccccCCCCCC
Q 010903          147 RVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNHPLPI  221 (498)
Q Consensus       147 Rv~v~a~~~~~~~~DGy~WRKYGQK~iKgn~~PRsYYRCT~s~gC~arKqVQr~~dD~~i~~ttY~G~HnH~~P~  221 (498)
                      ||+|++.++.++++|||+|||||||.|||+++||+|||||+ ++|+|+|+|||+.+|+.+++|||+|+|||+.|.
T Consensus         2 r~~v~t~~~~~~~~DGy~WRKYGQK~ikgs~~PRsYYrCt~-~gC~a~K~Ver~~~d~~~~~~tY~G~H~H~~p~   75 (76)
T 2ayd_A            2 RIVVHTQTLFDIVNDGYRWRKYGQKSVKGSPYPRSYYRCSS-PGCPVKKHVERSSHDTKLLITTYEGKHDHDMPP   75 (76)
T ss_dssp             EEEEEEECSSSCCCCSSCEEEEEEECCTTCSSCEEEEEECS-TTCCCEEEEEECSSSTTEEEEEEESCCSSCCCC
T ss_pred             eEEEEecCCCCcCCCCchhhhCcccccCCCCCceeEeEcCC-CCCCceeeEEEECCCCCEEEEEEccCcCCCCCC
Confidence            89999999999999999999999999999999999999998 699999999999999999999999999999886

>1wj2_A Probable WRKY transcription factor 4; DNA-binding domain, zinc-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.79.1.1 PDB: 2lex_A*

Probab=99.98  E-value=8.8e-34  Score=234.21  Aligned_cols=75  Identities=51%  Similarity=0.996  Sum_probs=68.9

Q ss_pred             ceEEEeecCCCCCCCCCcccccccccccCCCCCCCCccccCCCCCCccccceeeecCCCcEEEEEEccccCCCCCC
Q 010903          146 ARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNHPLPI  221 (498)
Q Consensus       146 ~Rv~v~a~~~~~~~~DGy~WRKYGQK~iKgn~~PRsYYRCT~s~gC~arKqVQr~~dD~~i~~ttY~G~HnH~~P~  221 (498)
                      .||+|++.++.++++|||+|||||||.|||+++||+|||||+ ++|+|+|+|||+.+|+.+++|||+|+|||+.|.
T Consensus         4 ~~~~~~t~s~~~~~dDGy~WRKYGQK~ikgs~~PRsYYrCt~-~gC~a~K~Ver~~~d~~~~~~tY~G~H~H~~p~   78 (78)
T 1wj2_A            4 GSSGVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTT-PGCGVRKHVERAATDPKAVVTTYEGKHNHDLPA   78 (78)
T ss_dssp             ----CCCCCCCCCCCSSSCBCCCEEECCTTCSSCEEEEEEEC-SSCEEEEEEEEETTTTSEEEEEEESCCSSCCCC
T ss_pred             ceEEEeccCCCCcCCCCchhhhCcccccCCCcCeeEEeecCc-CCCCcEeeEEEEcCCCCEEEEEEeeEcCCCCCC
Confidence            478999999999999999999999999999999999999999 699999999999999999999999999999884

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	498
d1wj2a_	71	g.79.1.1 (A:) WRKY DNA-binding protein 4 {Thale cr	7e-31

>d1wj2a_ g.79.1.1 (A:) WRKY DNA-binding protein 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 71

class: Small proteins
fold: WRKY DNA-binding domain
superfamily: WRKY DNA-binding domain
family: WRKY DNA-binding domain
domain: WRKY DNA-binding protein 4
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  111 bits (280), Expect = 7e-31
 Identities = 38/71 (53%), Positives = 50/71 (70%), Gaps = 1/71 (1%)

Query: 150 VRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTISPTCPVRKQVQRWHEDMSILIT 209
           V+   +   ++DG +WRKYGQK+ KGNP PR+YY+CT +P C VRK V+R   D   ++T
Sbjct: 1   VQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCT-TPGCGVRKHVERAATDPKAVVT 59

Query: 210 TYEGTHNHPLP 220
           TYEG HNH LP
Sbjct: 60  TYEGKHNHDLP 70

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	498
d1wj2a_	71	WRKY DNA-binding protein 4 {Thale cress (Arabidops	99.98

>d1wj2a_ g.79.1.1 (A:) WRKY DNA-binding protein 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: WRKY DNA-binding domain
superfamily: WRKY DNA-binding domain
family: WRKY DNA-binding domain
domain: WRKY DNA-binding protein 4
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.98  E-value=7.4e-34  Score=229.18  Aligned_cols=71  Identities=54%  Similarity=1.053  Sum_probs=67.1

Q ss_pred             EeecCCCCCCCCCcccccccccccCCCCCCCCccccCCCCCCccccceeeecCCCcEEEEEEccccCCCCCC
Q 010903          150 VRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTISPTCPVRKQVQRWHEDMSILITTYEGTHNHPLPI  221 (498)
Q Consensus       150 v~a~~~~~~~~DGy~WRKYGQK~iKgn~~PRsYYRCT~s~gC~arKqVQr~~dD~~i~~ttY~G~HnH~~P~  221 (498)
                      |++.++.++++|||+|||||||.|||+++||+||||++ ++|+|+|+|||+++|+.+++|||+|+|||++|.
T Consensus         1 v~t~~~~~~~dDGy~WRKYGQK~ikgs~~pRsYYrCt~-~~C~a~K~Vqr~~~d~~~~~vtY~G~H~h~~Ps   71 (71)
T d1wj2a_           1 VQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTT-PGCGVRKHVERAATDPKAVVTTYEGKHNHDLPA   71 (71)
T ss_dssp             CCCCCCCCCCCSSSCBCCCEEECCTTCSSCEEEEEEEC-SSCEEEEEEEEETTTTSEEEEEEESCCSSCCCC
T ss_pred             CccccccccCCCCcEecccCceeccCCCCceEEEEccc-cCCCCcceEEEEcCCCCEEEEEEeeEeCCCCCC
Confidence            45678889999999999999999999999999999998 699999999999999999999999999999874